# terms

id: GO:0019658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P124-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucose fermentation to lactate and acetate","synonyms":[{"name":"bifidum pathway","type":"exact"},{"name":"glucose catabolic process to lactate and acetate","type":"broad"}],"termid":"GO:0019658"}


id: PR:Q09808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival motor neuron-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.08c","synonyms":[{"name":"Spom972h-smn1","type":"exact"}],"termid":"PR:Q09808"}


id: GO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosterone","termid":"GO:0051412"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosterone stimulus","termid":"GO:0071386"}


id: PBO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C","termid":"PBO:0046044"}


id: GO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to a decrease in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000437"}


id: PBO:0043570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VII alpha 1 chain","termid":"PBO:0043570"}


id: GO:0043673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, sculptured layer of the exine, which lies above the nexine.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sexine","termid":"GO:0043673"}


id: PBO:0028961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycoprotein_glycan_structure","termid":"PBO:0028961"}


id: PBO:0072395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 like","termid":"PBO:0072395"}


id: PBO:0059868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 6","termid":"PBO:0059868"}


id: FYPO:0001563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutamate level","secondary_identifiers":["FYPO:0001615"],"synonyms":[{"name":"decreased cellular L-glutamate level","type":"exact"},{"name":"decreased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamate level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamic acid level","type":"related"},{"name":"decreased glutamate accumulation","type":"related"},{"name":"reduced cellular glutamate level","type":"exact"}],"termid":"FYPO:0001563"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: PBO:0076636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 3","termid":"PBO:0076636"}


id: GO:1904153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:18555783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein exit from endoplasmic reticulum","termid":"GO:0070862"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"negatively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"down regulation of protein dislocation from ER","type":"exact"},{"name":"down regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"down-regulation of protein dislocation from ER","type":"exact"},{"name":"down-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"down-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"downregulation of protein dislocation from ER","type":"exact"},{"name":"downregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"downregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"inhibition of protein dislocation from ER","type":"narrow"},{"name":"inhibition of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"inhibition of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"negative regulation of protein dislocation from ER","type":"exact"},{"name":"negative regulation of protein retrotranslocation from ER","type":"exact"},{"name":"negative regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904153"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: PBO:0091329
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPP34 domain-containing protein","termid":"PBO:0091329"}


id: PR:O14030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr5 gene.","definition_xrefs":["UniProtKB:O14030","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.08","synonyms":[{"name":"Spom972h-clr5","type":"exact"}],"termid":"PR:O14030"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: GO:2000817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of histone H3-T3 phosphorylation that is involved in chromosome passenger complex localization to kinetochore.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore (obsolete GO:2000817)","synonyms":[{"name":"regulation of histone H3-T3 phosphorylation involved in CPC complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in CPC localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:2000817"}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: PBO:0026923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_at_RxxS_site_during_nitrogen_starvation","termid":"PBO:0026923"}


id: PBO:0076809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance 2","termid":"PBO:0076809"}


id: PR:O13754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp70/Hsp90 co-chaperone cns1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.04c","secondary_identifiers":["UniProtKB:O13754"],"synonyms":[{"name":"Spom972h-TTC4","type":"exact"}],"termid":"PR:O13754"}


id: PBO:0062064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 2","termid":"PBO:0062064"}


id: PBO:0003445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr1 (predicted)","termid":"PBO:0003445"}


id: FYPO:0001607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-aspartate measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular aspartate level","termid":"FYPO:0001613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar aspartate level","synonyms":[{"name":"decreased level of aspartate in vacuole","type":"exact"},{"name":"decreased vacuolar L-aspartate level","type":"exact"},{"name":"decreased vacuolar aspartate level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar aspartate level during vegetative growth","type":"exact"},{"name":"decreased vacuolar aspartic acid level","type":"related"},{"name":"reduced level of aspartate in vacuole","type":"exact"},{"name":"reduced vacuolar aspartate level","type":"exact"}],"termid":"FYPO:0001607"}


id: PBO:0059507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase III","termid":"PBO:0059507"}


id: PBO:0089618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1","termid":"PBO:0089618"}


id: GO:0014722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of skeletal muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0014722"}


id: PBO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 3","termid":"PBO:0043924"}


id: PBO:0030893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_starvation_during_vegetative_growth","termid":"PBO:0030893"}


id: FYPO:0001112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000257","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"advanced cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"advanced cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"premature cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"premature mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"premature mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"premature nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0001112"}


id: PBO:0083258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; located in the telomeric region TEL08R","termid":"PBO:0083258"}


id: GO:0017110
data:
  {"annotated_genes":["SJAG_01595","SJAG_03362","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044715"},{"annotations":[110088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043262"},{"annotations":[110092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036384"},{"annotations":[110093,96456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004382"},{"annotations":[96458,110096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045134"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate + phosphate.","definition_xrefs":["EC:3.6.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03362":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"nucleoside diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8850854","Reactome:R-HSA-8851129","MetaCyc:NUCLEOSIDE-DIPHOSPHATASE-RXN","Reactome:R-HSA-8851225","Reactome:R-HSA-8851396","Reactome:R-HSA-8851550","RHEA:36799","Reactome:R-HSA-8851356"],"synonyms":[{"name":"NDPase activity","type":"related"},{"name":"apyrase activity","type":"broad"},{"name":"inosine 5'-diphosphatase","type":"narrow"},{"name":"inosine diphosphatase","type":"narrow"},{"name":"nucleoside 5'-diphosphatase activity","type":"related"},{"name":"nucleoside diphosphatase activity","type":"exact"},{"name":"nucleoside diphosphate phosphohydrolase activity","type":"related"},{"name":"nucleoside-diphosphatase activity","type":"exact"},{"name":"nucleoside-diphosphate phosphohydrolase activity","type":"related"},{"name":"type B nucleoside diphosphatase","type":"narrow"},{"name":"type L nucleoside diphosphatase","type":"narrow"}],"termid":"GO:0017110","terms_by_termid":{"GO:0004382":null,"GO:0036384":null,"GO:0043262":null,"GO:0044715":null,"GO:0045134":null}}


id: RO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"partner_in","termid":"RO:0002461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_participant_in","termid":"RO:0002463"}


id: PBO:0084045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation; controls phosphorylation of multiple proteins","termid":"PBO:0084045"}


id: MOD:01021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiocresyl","termid":"MOD:01021"}


id: GO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a chromaffin granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"chromaffin granule","termid":"GO:0042583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"chromaffin granule lumen","termid":"GO:0034466"}


id: PBO:0070597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 64","termid":"PBO:0070597"}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: PBO:0075898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 4","termid":"PBO:0075898"}


id: PBO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 divergent transcript","termid":"PBO:0075138"}


id: GO:1905055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium:cation antiporter activity that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:23255722","PMID:22972962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion antiporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"calcium:cation antiporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"broad"}],"termid":"GO:1905055"}


id: GO:0086071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an atrial cardiomyocyte to an AV node cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"atrial cardiac muscle cell-AV node cell adhesion involved in cell communication","synonyms":[{"name":"atrial cardiomyocyte-AV node cell adhesion involved in cell communication","type":"exact"},{"name":"atrial cardiomyocyte-atrioventricular node cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086071"}


id: PBO:0036017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K56_acetylation_during_vegetative_growth","termid":"PBO:0036017"}


id: PBO:0027229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_fatty_acid","termid":"PBO:0027229"}


id: PR:000045542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Thr-14 and Tyr-15 within the ATP binding region. UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048.","definition_xrefs":["PRO:CNA","PomBase:MAH","PMID:26131711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos:(T14,Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 3","type":"related"},{"name":"Cdc2-Hf","type":"exact"},{"name":"Spom-cdc2/Phos:3","type":"exact"},{"name":"UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos:(T14,Y15,T167)","type":"exact"}],"termid":"PR:000045542"}


id: PBO:0065664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N","termid":"PBO:0065664"}


id: PBO:0049035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 22","termid":"PBO:0049035"}


id: PBO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction","termid":"PBO:0036060"}


id: FYPO:0000369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain vacuoles.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles absent","synonyms":[{"name":"absent vacuolar morphology","type":"exact"},{"name":"vacuolar morphology: absent","type":"related"},{"name":"vacuoles absent during mitotic cell cycle","type":"related"},{"name":"vacuoles absent during vegetative growth","type":"exact"}],"termid":"FYPO:0000369"}


id: SO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one of the bases in the terminator codon is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator_codon_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","SO:0001625","loinc:LA6700-2"],"synonyms":[{"name":"VAT:endOverlap","type":"exact"},{"name":"terminal codon variant","type":"exact"},{"name":"terminal_codon_variant","type":"exact"},{"name":"terminator codon variant","type":"exact"}],"termid":"SO:0001590"}


id: GO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paclitaxel, a tetracyclic diterpenoid isolated originally from the bark of the Pacific yew tree, Taxus brevifolia.","definition_xrefs":["GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"paclitaxel biosynthetic process","secondary_identifiers":["GO:0042616"],"synonyms":[{"name":"paclitaxel anabolism","type":"exact"},{"name":"paclitaxel biosynthesis","type":"exact"},{"name":"paclitaxel formation","type":"exact"},{"name":"paclitaxel metabolic process","type":"broad"},{"name":"paclitaxel metabolism","type":"broad"},{"name":"paclitaxel synthesis","type":"exact"},{"name":"taxol biosynthesis","type":"narrow"},{"name":"taxol biosynthetic process","type":"narrow"},{"name":"taxol metabolic process","type":"broad"},{"name":"taxol metabolism","type":"broad"}],"termid":"GO:0042617"}


id: PBO:0080219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide","termid":"PBO:0080219"}


id: GO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT).","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"tolerance induction in MALT","type":"exact"}],"termid":"GO:0002401"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: GO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a basophil or group of basophils.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion by basophil","synonyms":[{"name":"serotonin release by basophil","type":"related"}],"termid":"GO:0002556"}


id: PBO:0012305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012305"}


id: PBO:0044301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 4","termid":"PBO:0044301"}


id: GO:0080021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["PMID:18753285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to benzoic acid","synonyms":[{"name":"response to benzoic acid stimulus","type":"exact"}],"termid":"GO:0080021"}


id: PBO:0080551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 10","termid":"PBO:0080551"}


id: GO:0018871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["UM-BBD_pathwayID:acp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate metabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate metabolism","type":"exact"},{"name":"ACP metabolic process","type":"exact"},{"name":"ACP metabolism","type":"exact"}],"termid":"GO:0018871"}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: GO:0015606
data:
  {"annotated_genes":["SJAG_02059","SJAG_02060","SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103211,105580,105586,105592,107063,113441],"is_not":false,"summary":null,"term":"GO:0015606"}]},"cv_name":"molecular_function","definition":"Enables the transfer of spermidine, N-(3-aminopropyl)-1,4-diaminobutane, from one side of a membrane to the other.","definition_xrefs":["GOC:ai","RHEA:35039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"spermidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015606","terms_by_termid":{"GO:0015606":null}}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29626935","PMID:29086764","PMID:29230098","PMID:29182528","PMID:29576969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: PBO:0058874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9986","termid":"PBO:0058874"}


id: PBO:0048040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 1","termid":"PBO:0048040"}


id: PBO:0074840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 33","termid":"PBO:0074840"}


id: GO:0022815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a large uncharged polar molecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete large uncharged polar molecule transmembrane transporter activity (obsolete GO:0022815)","synonyms":[{"name":"large uncharged polar molecule transmembrane transporter activity","type":"exact"}],"termid":"GO:0022815"}


id: PBO:0069719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 999, pseudogene","termid":"PBO:0069719"}


id: PBO:0012295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Spt16","termid":"PBO:0012295"}


id: PR:P49740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoside diphosphate kinase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside diphosphate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.07","secondary_identifiers":["UniProtKB:P49740"],"synonyms":[{"name":"NDK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NDP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC806.07","type":"related"},{"name":"Spom972h-NME1","type":"exact"}],"termid":"PR:P49740"}


id: PBO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_palmitoyl-CoA_ligase_activity","termid":"PBO:0030322"}


id: SO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_cluster","synonyms":[{"name":"V D DJ J cluster","type":"exact"},{"name":"V-D-(DJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000530"}


id: SO:1000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a change in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000085 sequence_variation_affecting_level_of_transcript (obsolete SO:1000085)","synonyms":[{"name":"mutation affecting level of transcript","type":"related"},{"name":"sequence variation affecting level of transcript","type":"exact"}],"termid":"SO:1000085"}


id: PBO:0039085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensinogen","termid":"PBO:0039085"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: PBO:0082539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; plays a role in maintenance of newly synthesized areas of cell wall; localizes to periphery of small buds, septum region of larger buds, and shmoo tip; CCW12 has a paralog, YDR134C, that arose from the whole genome duplication","termid":"PBO:0082539"}


id: PBO:0075106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 155","termid":"PBO:0075106"}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PMID:22988247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0003290"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: PBO:0029716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0029716"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: PR:P0CT40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-9 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.02c","synonyms":[{"name":"Spom972h-Tf2-9","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT40"}


id: GO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart.","definition_xrefs":["MA:0000708","MSH:D001158","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery smooth muscle contraction","termid":"GO:0014824"}


id: GO:0007611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition and processing of information and/or the storage and retrieval of this information over time.","definition_xrefs":["GOC:jid","PMID:8938125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learning or memory","termid":"GO:0007611"}


id: PBO:0041189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-transducin repeat containing E3 ubiquitin protein ligase pseudogene 1","termid":"PBO:0041189"}


id: PBO:0003883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase subunit H (predicted)","termid":"PBO:0003883"}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0004672","GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9821967","Reactome:R-HSA-9821982","Reactome:R-HSA-9729330"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: PBO:0026955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_growing_cell_tip","termid":"PBO:0026955"}


id: PBO:0063868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A pseudogene 1","termid":"PBO:0063868"}


id: PBO:0030192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0030192"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: PBO:0029516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002198)","termid":"PBO:0029516"}


id: PBO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored protein (predicted)","termid":"PBO:0000064"}


id: GO:0141030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by depolymerizing the host filamentous actin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11889090","PMID:28800062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via filamentous actin depolymerization","termid":"GO:0141030"}


id: GO:0008509
data:
  {"annotated_genes":["SJAG_00048","SJAG_01168","SJAG_01973","SJAG_01941","SJAG_02463","SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61256,64942],"is_not":false,"summary":null,"term":"GO:0008509"},{"annotations":[107790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[96945,109872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[101822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a negatively charged ion from one side of a membrane to the other.","definition_xrefs":["GOC:dgf","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoatomic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-166214"],"synonyms":[{"name":"anion transmembrane transporter activity","type":"broad"},{"name":"anion transporter activity","type":"exact"}],"termid":"GO:0008509","terms_by_termid":{"GO:0005254":null,"GO:0008308":null,"GO:0008509":null,"GO:0015379":null,"GO:1903425":null}}


id: MOD:01284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:9254591","PubMed:10825247","PubMed:15541752","Unimod:206#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site C","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01284"}


id: GO:0046618
data:
  {"annotated_genes":["SJAG_03951","SJAG_03363","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113125,114029,92631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic from a cell, into the extracellular region. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"xenobiotic export from cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"drug export","type":"related"},{"name":"xenobiotic export","type":"related"}],"termid":"GO:0046618","terms_by_termid":{"GO:1990961":null}}


id: PBO:0082143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of meiotic anaphase promoting complex (APC/C); Cdc20p family member; required for initiation of spore wall assembly; required for Clb1p degradation during meiosis; prevents premature assembly of the meiosis I spindle, required for DSB induced prophase I arrest","termid":"PBO:0082143"}


id: GO:1903022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:12192046","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:1903021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","synonyms":[{"name":"activation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"narrow"},{"name":"up regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"up-regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"},{"name":"upregulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","type":"exact"}],"termid":"GO:1903022"}


id: FYPO:0002279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division, with elongated germ tube","termid":"FYPO:0002409"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, single cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, single cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, single cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002279"}


id: PBO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function thought to be involved in endocytosis; physically interacts with Ede1p and is found at endocytic sites at cell periphery during early stages of endocytosis; green fluorescent protein (GFP)-fusion protein localizes to bud neck; potential Cdc28p substrate; similar to S. pombe Pal1 protein; relocalizes from bud neck to cytoplasm upon DNA replication stress; PAL1 has a paralog, YHR097C, that arose from the whole genome duplication","termid":"PBO:0086074"}


id: PBO:0045932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFHD2 antisense RNA 1","termid":"PBO:0045932"}


id: PBO:0059454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 4 with coiled-coils","termid":"PBO:0059454"}


id: PATO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A perimeter which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased perimeter","termid":"PATO:0001713"}


id: GO:2001046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"positively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of integrin-mediated signaling pathway","synonyms":[{"name":"positive regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001046"}


id: FYPO:0001777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"short eisosome filament","synonyms":[{"name":"decreased eisosome filament length","type":"exact"},{"name":"short eisosome filament during mitotic cell cycle","type":"related"},{"name":"short eisosome filament during vegetative growth","type":"exact"},{"name":"short linear eisosomes","type":"exact"}],"termid":"FYPO:0001777"}


id: GO:0102828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stachyose + alpha-D-galactosyl-(1->3)-1D-myo-inositol = verbascose + myo-inositol.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"stachyose galactinol:verbascose galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8284"],"termid":"GO:0102828"}


id: PBO:0011456
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag","termid":"PBO:0011456"}


id: PBO:0075697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 2","termid":"PBO:0075697"}


id: FYPO:0003197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during copper starvation during vegetative growth","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003197"}


id: PBO:0074921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 90","termid":"PBO:0074921"}


id: GO:0072489
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95378],"is_not":false,"summary":null,"term":"GO:0072489"}]},"cv_name":"biological_process","definition":"The process in which methylammonium is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylammonium transport","termid":"GO:0015843"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"methylammonium transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methylammonium membrane transport","type":"exact"}],"termid":"GO:0072489","terms_by_termid":{"GO:0072489":null}}


id: PBO:0080790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XNDC1N-ZNF705EP-ALG1L9P readthrough","termid":"PBO:0080790"}


id: PBO:0031056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_undivided_germinated_spores_(obsolete_FYPO:0000321)","termid":"PBO:0031056"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0098754"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: PBO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 42","termid":"PBO:0045852"}


id: GO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indan-1-ol + NAD(P)+ = indanone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.112","MetaCyc:INDANOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"indanol dehydrogenase activity","synonyms":[{"name":"indan-1-ol:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047718"}


id: PBO:0110188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial poly(A) RNA polymerase Atp25","termid":"PBO:0110188"}


id: PBO:0064360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premelanosome protein","termid":"PBO:0064360"}


id: PBO:0065964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 antisense RNA 1","termid":"PBO:0065964"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: GO:0036387
data:
  {"annotated_genes":["SJAG_02074","SJAG_02607","SJAG_00857","SJAG_02348","SJAG_05301","SJAG_03927","SJAG_01354","SJAG_04062","SJAG_02394","SJAG_01762","SJAG_04210","SJAG_00884","SJAG_02800","SJAG_03451","SJAG_01267"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107767,104180,99446,109303,106691,102540,103372,107508,93465,111216,84966,106350,88101,103965,111385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex that forms at the origin of replication during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:bf","GOC:bhm","Wikipedia:Pre-replication_complex","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pre-replicative complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC","type":"exact"},{"name":"pre-replication complex","type":"exact"}],"termid":"GO:0036387","terms_by_termid":{"GO:0005656":null}}


id: PBO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55 (predicted)","termid":"PBO:0000314"}


id: PBO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt3 (predicted)","termid":"PBO:0005755"}


id: PBO:0057485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 603","termid":"PBO:0057485"}


id: PBO:0091844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, heat shock specific","termid":"PBO:0091844"}


id: PBO:0080238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 1","termid":"PBO:0080238"}


id: PBO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 3","termid":"PBO:0072733"}


id: PBO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 35","termid":"PBO:0050904"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: MOD:01740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01740"}


id: PBO:0073542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3RF3 antisense RNA 1","termid":"PBO:0073542"}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00102","PANTHER:PTHR10742:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: GO:0035161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between compartments in an imaginal disc that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["PMID:10625531","GOC:bf","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"imaginal disc pattern formation","termid":"GO:0007447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc lineage restriction","termid":"GO:0035161"}


id: FYPO:0001059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal glutamate import during vegetative growth","synonyms":[{"name":"abnormal L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-glutamate import during vegetative growth","type":"exact"},{"name":"abnormal glutamate import during mitotic cell cycle","type":"related"},{"name":"abnormal glutamate import into cell during vegetative growth","type":"exact"},{"name":"abnormal glutamate uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001059"}


id: PBO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large and small subunit Gsa1","termid":"PBO:0017677"}


id: PBO:0004821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS binding protein Abp2","termid":"PBO:0004821"}


id: GO:0070928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, mediated by small non-coding RNAs, that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA stability, ncRNA-mediated (obsolete GO:0070928)","synonyms":[{"name":"ncRNA-mediated regulation of mRNA stability","type":"exact"},{"name":"regulation of mRNA stability, non-coding RNA-mediated","type":"exact"}],"termid":"GO:0070928"}


id: GO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-uridine to a protein amino acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein uridylylation","synonyms":[{"name":"protein amino acid uridylylation","type":"exact"}],"termid":"GO:0018177"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: PBO:0004470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18","termid":"PBO:0004470"}


id: PBO:0051671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 2","termid":"PBO:0051671"}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: GO:0099011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a neuronal dense core vesicle by fusion of the granule with the plasma membrane of a neuron in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:24653208","GOC:kmv","PMID:17553987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}


id: PBO:0056689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 10","termid":"PBO:0056689"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: PBO:0039858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23","termid":"PBO:0039858"}


id: MOD:00523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:155","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2dHex1Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(1)Pent(1)","type":"related"},{"name":"Hex1HexNAc2dHex1Pent1","type":"related"}],"termid":"MOD:00523"}


id: GO:0042352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of GDP-L-fucose from L-fucose, without de novo synthesis. L-fucose is phosphorylated by fucokinase and then converted by fucose-1-phosphate guanylyltransferase (EC:2.7.7.30).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP-L-fucose salvage","secondary_identifiers":["MetaCyc:PWY-6"],"synonyms":[{"name":"GDP-L-fucose biosynthesis, salvage pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0042352"}


id: PBO:0080490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWA8 antisense RNA 1 (head to head)","termid":"PBO:0080490"}


id: GO:0060928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell development","termid":"GO:0060926"},{"relation_name":"part_of","term_name":"atrioventricular node cell differentiation","termid":"GO:0060922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell development","synonyms":[{"name":"AV node cell development","type":"exact"}],"termid":"GO:0060928"}


id: GO:1903670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16756958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting angiogenesis","termid":"GO:1903670"}


id: FYPO:0004884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle midzone for a longer time than normal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle","termid":"FYPO:0004023"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle midzone","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle midzone","type":"exact"},{"name":"increased duration of protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0004884"}


id: PBO:0043054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like EF-hand protein 2","termid":"PBO:0043054"}


id: MOD:01025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-bromo-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated tyrosine","termid":"MOD:01000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-bromo-L-tyrosine","synonyms":[{"name":"3'-BrTyr","type":"exact"}],"termid":"MOD:01025"}


id: PBO:0039072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 4","termid":"PBO:0039072"}


id: PBO:0041931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 2","termid":"PBO:0041931"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: PBO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein (predicted)","termid":"PBO:0000890"}


id: FYPO:0005053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RITS complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RITS complex assembly","synonyms":[{"name":"abnormal RITS complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal RITS complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005053"}


id: PBO:0080203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial zinc finger 1 pseudogene 1","termid":"PBO:0080203"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: PBO:0091069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mug129-like protein Mug129b","termid":"PBO:0091069"}


id: PBO:0004548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.3","termid":"PBO:0004548"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["UniProtKB:O13898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: PBO:0026688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_carboxypeptidase_activity","termid":"PBO:0026688"}


id: PBO:0064462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase beta","termid":"PBO:0064462"}


id: PBO:0109977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109977"}


id: GO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:mah","PMID:21123617","PMID:28089324","NIF_Subcellular:nlx_subcell_20090513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular matrix","secondary_identifiers":["Wikipedia:Extracellular_matrix","GO:0005578"],"synonyms":[{"name":"matrisome","type":"narrow"},{"name":"proteinaceous extracellular matrix","type":"exact"}],"termid":"GO:0031012"}


id: PATO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a mating type (yeast)","synonyms":[{"name":"a","type":"broad"}],"termid":"PATO:0001341"}


id: PBO:0075690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 1 pseudogene 1","termid":"PBO:0075690"}


id: PR:Q8TFH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome assembly protein 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00511","PANTHER:PTHR12888:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome assembly protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.03","secondary_identifiers":["UniProtKB:Q8TFH8"],"synonyms":[{"name":"Spom972h-PEX12","type":"exact"},{"name":"peroxin-12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH8"}


id: GO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 2-aminophenol + 3 O2 = 2 isophenoxazine + 6 H2O.","definition_xrefs":["EC:1.10.3.4","MetaCyc:O-AMINOPHENOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"o-aminophenol oxidase activity","secondary_identifiers":["RHEA:40963"],"synonyms":[{"name":"2-aminophenol:O2 oxidoreductase activity","type":"related"},{"name":"2-aminophenol:oxygen oxidoreductase activity","type":"related"},{"name":"GriF","type":"related"},{"name":"isophenoxazine synthase activity","type":"related"},{"name":"o-aminophenol:O2 oxidoreductase activity","type":"related"}],"termid":"GO:0050149"}


id: GO:1903241
data:
  {"annotated_genes":["SJAG_00313","SJAG_02558","SJAG_00498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102890,108578,109981],"is_not":false,"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an U2-type prespliceosome.","definition_xrefs":["GOC:TermGenie","PMID:12374752","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00313":null,"SJAG_00498":null,"SJAG_02558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0016071","GO:0065003"],"is_obsolete":false,"name":"U2-type prespliceosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome assembly","type":"narrow"},{"name":"GT-AG prespliceosome formation","type":"narrow"},{"name":"U2-type prespliceosome formation","type":"exact"},{"name":"major prespliceosome assembly","type":"exact"},{"name":"major prespliceosome formation","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A assembly","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex A formation","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B assembly","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B formation","type":"narrow"}],"termid":"GO:1903241","terms_by_termid":{"GO:1903241":null}}


id: FYPO:0007460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the midzone of the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["PomBase:mah","PMID:32848252","GO:0140510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","termid":"FYPO:0007459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0007460"}


id: FYPO:0001899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during glucose starvation","synonyms":[{"name":"P bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose depletion","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose deprivation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose limitation","type":"related"},{"name":"P-bodies present in reduced numbers during glucose starvation","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"decreased P-body number during glucose starvation","type":"exact"},{"name":"decreased number of P-bodies present during glucose starvation","type":"exact"},{"name":"fewer P-bodies present during glucose starvation","type":"exact"}],"termid":"FYPO:0001899"}


id: GO:0035939
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92204],"is_not":false,"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to a microsatellite, a repeat_region in DNA containing repeat units (2 to 4 base pairs) that is repeated multiple times in tandem.","definition_xrefs":["SO:0000289","PMID:21290414","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"satellite DNA binding","termid":"GO:0003696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"microsatellite binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"VNTR binding","type":"exact"},{"name":"microsatellite DNA binding","type":"exact"},{"name":"variable number tandem repeat binding","type":"exact"}],"termid":"GO:0035939","terms_by_termid":{"GO:0035939":null}}


id: GO:0099585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into presynaptic cytosol","termid":"GO:0099585"}


id: PBO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-invasive_growth_abolished_(obsolete_FYPO:0000048)","termid":"PBO:0031381"}


id: FYPO:0003099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type). Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal heterochromatin organization during vegetative growth","termid":"FYPO:0002892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal heterochromatin assembly","synonyms":[{"name":"normal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003099"}


id: PBO:0053904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1194","termid":"PBO:0053904"}


id: GO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}


id: PBO:0054030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1361","termid":"PBO:0054030"}


id: PR:P87233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phf1 gene.","definition_xrefs":["UniProtKB:P87233","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWM histone demethylase complex subunit phf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.07c","synonyms":[{"name":"PHD finger domain-containing protein phf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-phf1","type":"exact"}],"termid":"PR:P87233"}


id: PR:Q9UT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01316","PANTHER:PTHR23249:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.16c","secondary_identifiers":["UniProtKB:Q9UT70"],"synonyms":[{"name":"Spom972h-TRAPPC1","type":"exact"}],"termid":"PR:Q9UT70"}


id: PBO:0082635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of eisosome required for proper eisosome assembly; precedes Pil1p/Lsp1p during eisosome formation, controls eisosome length and shape; diffusely distributed, forms heterogeneous patches at plasma membrane in small buds, also found in medium and large buds; expression repressed by cAMP; similar to A. gossypii SEG gene and to S. pombe Sle1p, important for generating eisosomes; SEG1 has a paralog, SEG2, that arose from the whole genome duplication","termid":"PBO:0082635"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: PBO:0090530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit E","termid":"PBO:0090530"}


id: PBO:0067210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 275, pseudogene","termid":"PBO:0067210"}


id: GO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor receptor signaling pathway","termid":"GO:0030947"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"activation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0030949"}


id: PBO:0077367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 106C","termid":"PBO:0077367"}


id: PBO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_morphology","termid":"PBO:0031842"}


id: GO:0030809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of nucleotide biosynthetic process","synonyms":[{"name":"down regulation of nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of nucleotide anabolism","type":"exact"},{"name":"negative regulation of nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of nucleotide formation","type":"exact"},{"name":"negative regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030809"}


id: PBO:0003895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Iki1 (predicted)","termid":"PBO:0003895"}


id: FYPO:0002527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the cell division site for longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to cell division site","synonyms":[{"name":"increased duration of protein localisation to cell division site","type":"exact"},{"name":"increased duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased duration of protein recruitment to cell division site","type":"related"},{"name":"prolonged protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002527"}


id: RO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor anatomical structure type T to T', where T' develops_from T","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induced_by","termid":"RO:0002256"}


id: GO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"}


id: PBO:0055861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 8","termid":"PBO:0055861"}


id: GO:0071687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the horsetail nucleus where telomeres cluster under the SPB and that leads horsetail movement. The horsetail nucleus is the elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:mah","PMID:15030757","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus leading edge (obsolete GO:0071687)","termid":"GO:0071687"}


id: PBO:0058704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6832","termid":"PBO:0058704"}


id: PBO:0062369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 5","termid":"PBO:0062369"}


id: PBO:0040319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit gamma pseudogene 1","termid":"PBO:0040319"}


id: GO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a titin Z protein domain, which recognizes and binds to the C-terminal calmodulin-like domain of alpha-actinin-2 (Act-EF34), adopts a helical structure, and binds in a groove formed by the two planes between the helix pairs of Act-EF34.","definition_xrefs":["InterPro:IPR015129","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"titin Z domain binding","synonyms":[{"name":"Z repeat domain binding","type":"exact"}],"termid":"GO:0070080"}


id: PBO:0058503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5693","termid":"PBO:0058503"}


id: PBO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyogamy Meiotic Segregation protein","termid":"PBO:0002064"}


id: PBO:0059764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 38","termid":"PBO:0059764"}


id: PBO:0108751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 actin-like protein Arp6","termid":"PBO:0108751"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: FYPO:0002722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"phytochelatin absent from cell","synonyms":[{"name":"cadystin absent from cell","type":"exact"},{"name":"phytochelatin absent from cell during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002722"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: FYPO:0006612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased at sequences that cause RNA polymerase to terminate transcription.","definition_xrefs":["SO:0002213","PMID:29899453","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcription termination site","synonyms":[{"name":"decreased protein localisation to chromatin at transcription termination site","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination signal","type":"exact"},{"name":"decreased protein localization to chromatin at transcription termination site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at transcription termination site during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcription termination site","type":"exact"}],"termid":"FYPO:0006612"}


id: PBO:0087963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter; member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to the siderophore triacetylfusarinine C","termid":"PBO:0087963"}


id: PBO:0041700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 6","termid":"PBO:0041700"}


id: GO:0008041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein of fat body (sensu Insecta) (obsolete GO:0008041)","synonyms":[{"name":"storage protein of fat body (sensu Insecta)","type":"exact"}],"termid":"GO:0008041"}


id: PBO:0067403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 510, pseudogene","termid":"PBO:0067403"}


id: GO:0032020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition to a protein of ISG15, a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"ISG15-protein conjugation","termid":"GO:0032020"}


id: GO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alcohol from one side of a membrane to the other. An alcohol is any carbon compound that contains a hydroxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}


id: PR:O14296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01849","PANTHER:PTHR10476:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.14","secondary_identifiers":["UniProtKB:O14296"],"synonyms":[{"name":"Spom972h-CHMP3","type":"exact"}],"termid":"PR:O14296"}


id: PBO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 1","termid":"PBO:0061449"}


id: GO:0030015
data:
  {"annotated_genes":["SJAG_03883","SJAG_02540","SJAG_00285","SJAG_04350","SJAG_03597","SJAG_04407","SJAG_01053","SJAG_01944","SJAG_00343"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85956,88135,88641,88734,90468,91645,111759,112715,113254],"is_not":false,"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The core of the CCR4-NOT complex. In Saccharomyces the CCR4-NOT core complex comprises Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p.","definition_xrefs":["GOC:sart","PMID:11113136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"CCR4-NOT complex","termid":"GO:0030014"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CCR4-NOT core complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030015","terms_by_termid":{"GO:0030015":null}}


id: GO:0102173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenecycloartanol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"24-methylenecycloartanol 4alpha-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11926","RHEA:58836"],"termid":"GO:0102173"}


id: PBO:0053906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1198","termid":"PBO:0053906"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["PMID:16571594","GOC:TermGenie","GO_REF:0000072","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: PBO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 2","termid":"PBO:0046280"}


id: PBO:0062071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 2 pseudogene","termid":"PBO:0062071"}


id: PATO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000844 auditory acuity (obsolete PATO:0000844)","termid":"PATO:0000844"}


id: PBO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane alkali metal cation/H+ antiporter Sod22","termid":"PBO:0002059"}


id: PBO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 2","termid":"PBO:0050146"}


id: GO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell apoptotic process","termid":"GO:0010656"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"down-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"downregulation of smooth muscle cell apoptosis","type":"exact"},{"name":"inhibition of smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of SMC apoptosis","type":"exact"},{"name":"negative regulation of smooth muscle cell apoptosis","type":"narrow"}],"termid":"GO:0034392"}


id: PBO:0046104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 7","termid":"PBO:0046104"}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Wikipedia:Neurotransmission"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1 (predicted)","termid":"PBO:0017998"}


id: PBO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO pseudogene 1","termid":"PBO:0048102"}


id: PBO:0058538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6083","termid":"PBO:0058538"}


id: PBO:0057483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 601","termid":"PBO:0057483"}


id: PR:O94432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CUGBP Elav-like family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C660.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.15","secondary_identifiers":["UniProtKB:O94432"],"synonyms":[{"name":"Spom972h-CELF4","type":"exact"}],"termid":"PR:O94432"}


id: PBO:0071821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 16","termid":"PBO:0071821"}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: GO:0008213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an alkyl group to a protein amino acid. Alkyl groups are derived from alkanes by removal of one hydrogen atom.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein alkylation","synonyms":[{"name":"protein amino acid alkylation","type":"exact"}],"termid":"GO:0008213"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 29","termid":"PBO:0070799"}


id: PBO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 21","termid":"PBO:0071604"}


id: PBO:0070752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 8","termid":"PBO:0070752"}


id: GO:0016192
data:
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id: PBO:0079172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 1","termid":"PBO:0079172"}


id: PBO:0003809
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH complex cyclin Mcs2","termid":"PBO:0003809"}


id: PBO:0017529
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3 (prediected)","termid":"PBO:0017529"}


id: GO:0070916
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  {"annotated_genes":["SJAG_00506","SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91279,93638],"is_not":false,"summary":null,"term":"GO:0070916"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses inositol phosphoceramide synthase activity and contains a catalytic subunit and a regulatory subunit (Aur1p and Kei1p, respectively, in Saccharomyces).","definition_xrefs":["PMID:19726565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"inositol phosphoceramide synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IPC synthase complex","type":"exact"}],"termid":"GO:0070916","terms_by_termid":{"GO:0070916":null}}


id: GO:0071292
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver (Ag+) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to silver ion","termid":"GO:0010272"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to silver ion","termid":"GO:0071292"}


id: PBO:0051322
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-5 (pseudogene)","termid":"PBO:0051322"}


id: PBO:0083586
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YAR060C has a paralog, YHR212C, that arose from a segmental duplication","termid":"PBO:0083586"}


id: PBO:0088067
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; cleaves ubiquitin from ubiquitinated proteins; UBP11 has a paralog, UBP7, that arose from the whole genome duplication","termid":"PBO:0088067"}


id: PBO:0085343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; contains lipase specific GXSXG motif; maintains lipid droplet (LD) morphology; induced by transcription factor Rpn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085343"}


id: PBO:0031595
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_positive_regulation_of_transcription","termid":"PBO:0031595"}


id: PBO:0060313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase 2","termid":"PBO:0060313"}


id: PBO:0042282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1b molecule","termid":"PBO:0042282"}


id: GO:0035349
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a membrane. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transport","termid":"GO:0015880"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transport","termid":"GO:0071106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme A membrane transport","type":"exact"}],"termid":"GO:0035349","terms_by_termid":{"GO:1990559":null}}


id: PBO:0001926
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup98 and Nup96","termid":"PBO:0001926"}


id: GO:1905319
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal stem cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:24924806","GO_REF:0000091","PMID:25181476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell migration","termid":"GO:1905319"}


id: GO:0061065
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: GO:1905236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24914722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to quercetin","termid":"GO:1905235"},{"relation_name":"is_a","term_name":"cellular response to flavonoid","termid":"GO:1905396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to quercetin","termid":"GO:1905236"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: PBO:0068016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 321","termid":"PBO:0068016"}


id: PBO:0073884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 2","termid":"PBO:0073884"}


id: PBO:0026849
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_snRNA_gene","termid":"PBO:0026849"}


id: PBO:0064384
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 6","termid":"PBO:0064384"}


id: GO:0022842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: GO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + acceptor + H2O = 1,3-diaminopropane + 4-aminobutanal + reduced acceptor.","definition_xrefs":["EC:1.5.99.6","MetaCyc:SPERMIDINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"spermidine dehydrogenase activity","secondary_identifiers":["RHEA:14273"],"synonyms":[{"name":"spermidine:(acceptor) oxidoreductase activity","type":"related"},{"name":"spermidine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0050289"}


id: MOD:01444
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["RESID:AA0492#CYS","PubMed:11435113","PubMed:17558559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01444"}


id: PBO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV stimulated scaffold protein A","termid":"PBO:0080116"}


id: PBO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neurone disease","termid":"PBO:0000613"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["GOC:mtg_sensu","GOC:krc","PMID:16140984","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: GO:0055105
data:
  {"annotated_genes":["SJAG_01515","SJAG_02485","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110743],"is_not":false,"summary":null,"term":"GO:0055105"},{"annotations":[111664,94828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin-protein transferase.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_02485":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"ubiquitin-protein transferase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055105","terms_by_termid":{"GO:0055105":null,"GO:1990948":null}}


id: GO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a voltage-gated sodium channel in the bitten organism.","definition_xrefs":["GOC:jl","PMID:21781281","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044492"}


id: GO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole acetic acid + S-adenosyl-methionine = methyl indole acetic acid ester + S-adenosyl-homocysteine.","definition_xrefs":["PMID:16169896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole acetic acid carboxyl methyltransferase activity","synonyms":[{"name":"IAA carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0051749"}


id: PBO:0086652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole, while HA-tagged protein is found in the soluble fraction, suggesting cytoplasmic localization","termid":"PBO:0086652"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: PBO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 14","termid":"PBO:0050197"}


id: GO:1900166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"regulation of GDNF secretion","type":"narrow"},{"name":"regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900166"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GOC:aruk","GOC:TermGenie","GOC:bc","GO_REF:0000059","PMID:7683668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate binding","termid":"GO:1905853"}


id: PBO:0063402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 1","termid":"PBO:0063402"}


id: GO:0102179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-ethylidenelophenol + NADH + O2 + H+ = 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"24-ethylidenelophenol 4alpha-methyl oxidase activity","secondary_identifiers":["RHEA:59032","MetaCyc:RXN-11935"],"termid":"GO:0102179"}


id: GO:0052088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont defense to host-produced jasmonic acid","secondary_identifiers":["GO:0052068","GO:0052082","GO:0052073","GO:0052267","GO:0052443","GO:0052271","GO:0052266","GO:0052069","GO:0052283"],"synonyms":[{"name":"activation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"down regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"down-regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"downregulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"inhibition by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by organism of host JA-mediated defense response","type":"narrow"},{"name":"modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"positive regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"stimulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"suppression by organism of host JA-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host jasmonic acid-mediated defense response","type":"related"},{"name":"up regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"up-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052088"}


id: GO:0005402
data:
  {"annotated_genes":["SJAG_04905","SJAG_03606","SJAG_00057","SJAG_02958","SJAG_03608","SJAG_03960","SJAG_04068","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75386,110298,99115,110291,72158,88635,113299,106785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[91911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[91912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + cation(out) = sugar(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbohydrate:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate:cation symporter activity","type":"broad"},{"name":"cation/sugar symporter activity","type":"exact"},{"name":"cation:sugar symporter activity","type":"exact"},{"name":"sugar:cation symporter activity","type":"narrow"}],"termid":"GO:0005402","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null}}


id: PBO:0109462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L50","termid":"PBO:0109462"}


id: PBO:0039797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3","termid":"PBO:0039797"}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: PBO:0028586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_bundle_assembly","termid":"PBO:0028586"}


id: PBO:0083128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulose-5-phosphate 3-epimerase; catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress","termid":"PBO:0083128"}


id: PBO:0027921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_papuamide_B","termid":"PBO:0027921"}


id: GO:0007156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}


id: FYPO:0000330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone modification during vegetative growth","synonyms":[{"name":"abnormal histone modification during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000330"}


id: GO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PSII associated light-harvesting complex II.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II binding","termid":"GO:0062066"}


id: PBO:0081282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 57","termid":"PBO:0081282"}


id: SO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number as extra chromosomes are present.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"SO:0000054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Hyperploid"],"termid":"SO:0000055"}


id: PBO:0078585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 59","termid":"PBO:0078585"}


id: PBO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_mislocalized_to_nucleus_and_spindle_pole_body","termid":"PBO:0034641"}


id: PBO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 17","termid":"PBO:0075161"}


id: PBO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe SYntaxin-like protein","termid":"PBO:0018162"}


id: PBO:0013831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine ammonia-lyase","termid":"PBO:0013831"}


id: GO:0098569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.","definition_xrefs":["GOC:dos","PMID:18316738","PMID:18567661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internal side of mycolate outer membrane","termid":"GO:0098569"}


id: PR:O74521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.15c gene.","definition_xrefs":["UniProtKB:O74521","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C663.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.15c","synonyms":[{"name":"Spom972h-SPCC663.15c","type":"exact"}],"termid":"PR:O74521"}


id: GO:1903033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule plus-end binding.","definition_xrefs":["PMID:16148041","GO_REF:0000059","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule plus-end binding","termid":"GO:1903031"},{"relation_name":"is_a","term_name":"positive regulation of microtubule binding","termid":"GO:1904528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule plus-end binding","synonyms":[{"name":"activation of microtubule plus-end binding","type":"narrow"},{"name":"up regulation of microtubule plus-end binding","type":"exact"},{"name":"up-regulation of microtubule plus-end binding","type":"exact"},{"name":"upregulation of microtubule plus-end binding","type":"exact"}],"termid":"GO:1903033"}


id: GO:0018419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a protein structure comprising two or more rings that are interlocked but not covalently joined; resembling the links of a chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"protein catenane formation","termid":"GO:0018419"}


id: PBO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm5","termid":"PBO:0001745"}


id: GO:0032818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation","synonyms":[{"name":"down regulation of natural killer cell proliferation","type":"exact"},{"name":"down-regulation of natural killer cell proliferation","type":"exact"},{"name":"downregulation of natural killer cell proliferation","type":"exact"},{"name":"inhibition of natural killer cell proliferation","type":"narrow"},{"name":"negative regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032818"}


id: PATO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to spontaneously arise.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, spontaneous","termid":"PATO:0002473"}


id: GO:1902432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a division septum.","definition_xrefs":["PMID:9367977","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to division septum","synonyms":[{"name":"protein localisation in division septum","type":"exact"},{"name":"protein localisation to division septum","type":"exact"},{"name":"protein localization in division septum","type":"exact"}],"termid":"GO:1902432"}


id: PR:Q92347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.02c","secondary_identifiers":["UniProtKB:Q92347"],"synonyms":[{"name":"Spom972h-NOP9","type":"exact"},{"name":"pumilio domain-containing protein nop9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92347"}


id: PBO:0059614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 26","termid":"PBO:0059614"}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:16935884","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: PBO:0079234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9","termid":"PBO:0079234"}


id: GO:0102783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + 2 O2 = 2 beta-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene oxygenase activity (obsolete GO:0102783)","termid":"GO:0102783"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: PBO:0054382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1778","termid":"PBO:0054382"}


id: PBO:0053109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1","termid":"PBO:0053109"}


id: PR:Q1MTR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease ATP23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21711:SF0","OMA:SCHPO04204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease atp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.12","secondary_identifiers":["UniProtKB:Q1MTR0"],"synonyms":[{"name":"Spom972h-XRCC6BP1","type":"exact"}],"termid":"PR:Q1MTR0"}


id: GO:2000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"positively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ribonucleoprotein complex localization","synonyms":[{"name":"positive regulation of RNP localization","type":"exact"},{"name":"positive regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"positive regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000199"}


id: PBO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 8","termid":"PBO:0045729"}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: PBO:0067676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 861, pseudogene","termid":"PBO:0067676"}


id: GO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.","definition_xrefs":["RESID:AA0039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}


id: PBO:0110236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/ Las1 complex endonuclease Las1","termid":"PBO:0110236"}


id: PBO:0054249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1632","termid":"PBO:0054249"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["PMID:21123617","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: PBO:0057096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 192","termid":"PBO:0057096"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["GOC:rjd","PMID:22008230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: PBO:0053417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 355","termid":"PBO:0053417"}


id: PBO:0044485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily A member 1","termid":"PBO:0044485"}


id: PBO:0041718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 3","termid":"PBO:0041718"}


id: FYPO:0005542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which telomerase template activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"abnormal telomerase template activity","synonyms":[{"name":"abnormal telomerase RNA activity","type":"exact"},{"name":"abnormal template for synthesis of G-rich strand of telomere DNA activity","type":"exact"}],"termid":"FYPO:0005542"}


id: GO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta-carotenol + O2 = (E,E)-7-hydroxy-6-methylhepta-3,5-dienal + 14'-apo-beta-carotenal.","definition_xrefs":["EC:1.13.11.67","RHEA:26023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"apo-beta-carotenoid-14',13'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R08889","MetaCyc:1.13.12.12-RXN"],"synonyms":[{"name":"8'-apo-beta-carotenol:O2 oxidoreductase activity","type":"related"},{"name":"apo-b-carotenoid-14',13'-dioxygenase activity","type":"exact"}],"termid":"GO:0050588"}


id: PBO:0082930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial glycyl-tRNA synthase; ligates glycine to the cognate anticodon-bearing tRNA; transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation; GRS1 has a paralog, GRS2, that arose from the whole genome duplication; human homolog GARS implicated in Charcot-Marie-Tooth disease, can complement yeast null mutant","termid":"PBO:0082930"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: GO:0046113
data:
  {"annotated_genes":["SJAG_01997","SJAG_05287","SJAG_04299","SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[110189,87918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[113450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase breakdown","type":"exact"},{"name":"nucleobase catabolism","type":"exact"},{"name":"nucleobase degradation","type":"exact"}],"termid":"GO:0046113","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: PBO:0066189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11 pseudogene 1","termid":"PBO:0066189"}


id: GO:0007290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in shape of the spermatid nucleus from a spherical structure to an elongated organelle, during the latter part of spermatid differentiation.","definition_xrefs":["GOC:jl","GOC:bf","GOC:mah","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid nucleus elongation","synonyms":[{"name":"spermatid nuclear elongation","type":"exact"}],"termid":"GO:0007290"}


id: GO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-amino-2-methylpropanoate + pyruvate = 2-methyl-3-oxopropanoate + L-alanine.","definition_xrefs":["RHEA:18393","EC:2.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"(R)-3-amino-2-methylpropionate-pyruvate transaminase activity","secondary_identifiers":["GO:0047314","MetaCyc:2.6.1.40-RXN","Reactome:R-HSA-909780","KEGG_REACTION:R02050"],"synonyms":[{"name":"(R)-3-amino-2-methylpropanoate aminotransferase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate:pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropionate--pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate-pyruvate aminotransferase activity","type":"exact"},{"name":"D-3-aminoisobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"D-3-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"D-3-aminoisobutyrate-pyruvate transaminase activity","type":"related"},{"name":"D-AIBAT activity","type":"related"},{"name":"D-beta-aminoisobutyrate:pyruvate aminotransferase activity","type":"related"},{"name":"beta-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0047305"}


id: GO:0030854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"positively_regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte differentiation","synonyms":[{"name":"activation of granulocyte differentiation","type":"narrow"},{"name":"stimulation of granulocyte differentiation","type":"narrow"},{"name":"up regulation of granulocyte differentiation","type":"exact"},{"name":"up-regulation of granulocyte differentiation","type":"exact"},{"name":"upregulation of granulocyte differentiation","type":"exact"}],"termid":"GO:0030854"}


id: MOD:01276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-tyrosine residue.","definition_xrefs":["PubMed:8597590","PubMed:10906242","Unimod:276#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-[4-(2-aminoethyl)benzenesulfonyl]tyrosine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01276"}


id: FYPO:0001456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to endoplasmic reticulum stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"increased RNA accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"increased RNA level during response to ER stress","type":"exact"},{"name":"increased RNA level under ER stress-inducing conditions","type":"related"},{"name":"increased mRNA level during cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"increased transcript level during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"increased unfolded protein response","type":"related"}],"termid":"FYPO:0001456"}


id: PBO:0031382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth","termid":"PBO:0031382"}


id: MOD:00916
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115507,115166,115509,115510,115508,115165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-serine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-serine residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"ModSer","type":"exact"}],"termid":"MOD:00916","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:2000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of apoptotic cell clearance","synonyms":[{"name":"regulation of apoptotic cell removal","type":"exact"},{"name":"regulation of efferocytosis","type":"exact"},{"name":"regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000425"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: GO:0032487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rap protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rap protein signal transduction","termid":"GO:0032486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rap protein signal transduction","termid":"GO:0032487"}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: FYPO:0001684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to purvalanol A","synonyms":[{"name":"decreased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"decreased transcript level during cellular response to purvalanol A","type":"exact"},{"name":"reduced RNA level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001684"}


id: PBO:0079881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 2","termid":"PBO:0079881"}


id: PBO:0067142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 190, pseudogene","termid":"PBO:0067142"}


id: GO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045565)","synonyms":[{"name":"down regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045565"}


id: FYPO:0006906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G2 to M phase until the cell reaches a certain size.","definition_xrefs":["PomBase:mah","GO:0031569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic G2 cell size control checkpoint","synonyms":[{"name":"normal G2 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G2 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006906"}


id: PBO:0090825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac32","termid":"PBO:0090825"}


id: GO:0015465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An agent that can lyse cells.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete lysin activity (obsolete GO:0015465)","synonyms":[{"name":"lysin activity","type":"exact"}],"termid":"GO:0015465"}


id: PATO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid.","definition_xrefs":["edp:edp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soluble in","synonyms":[{"name":"soluble","type":"exact"}],"termid":"PATO:0001537"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: PBO:0046614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER61 member 1","termid":"PBO:0046614"}


id: PBO:0074877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58B","termid":"PBO:0074877"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: PBO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_negative_regulation_of","termid":"PBO:0034103"}


id: PBO:0038960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase","termid":"PBO:0038960"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: FYPO:0001439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloramphenicol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on chloramphenicol","synonyms":[{"name":"normal cell population growth in presence of chloramphenicol","type":"exact"},{"name":"normal cell population growth on chloramphenicol","type":"exact"},{"name":"normal cellular response to chloramphenicol","type":"related"},{"name":"normal vegetative cell population growth on chloramphenicol","type":"exact"}],"termid":"FYPO:0001439"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["EC:2.7.1.87","RHEA:18377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: PBO:0065378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 6","termid":"PBO:0065378"}


id: GO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells of the ectoplacental cone acquire specialized structural and/or functional features that characterize chorionic trophoblasts. These cells will migrate towards the spongiotrophoblast layer and give rise to syncytiotrophoblasts of the labyrinthine layer.","definition_xrefs":["PMID:16983341","GOC:dph","CL:0011101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"chorion development","termid":"GO:0060717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell differentiation","termid":"GO:0060718"}


id: PBO:0073615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIDT1 antisense RNA 1","termid":"PBO:0073615"}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["GOC:rph","PMID:10630641"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: PBO:0077456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 6","termid":"PBO:0077456"}


id: GO:0071044
data:
  {"annotated_genes":["SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88387],"is_not":false,"summary":null,"term":"GO:0071044"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histone messenger RNA (mRNA).","definition_xrefs":["GOC:dgf","PMID:17179095","PMID:17855393","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"histone mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071044","terms_by_termid":{"GO:0071044":null}}


id: GO:0022874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + cellobiose(out) = protein histidine + cellobiose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"cellobiose transmembrane transporter activity","termid":"GO:0019191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0005215","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-cellobiose phosphotransferase system transporter activity","synonyms":[{"name":"cellobiose PTS transporter activity","type":"exact"}],"termid":"GO:0022874"}


id: GO:1904542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:pad","PMID:24660806","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"}


id: GO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in a host vacuole. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host vacuole (obsolete GO:0044120)","synonyms":[{"name":"development of symbiont in host organelle","type":"broad"}],"termid":"GO:0044120"}


id: FYPO:0002881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation and oxidative stress simultaneously. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during glucose starvation","termid":"FYPO:0002878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during glucose starvation and oxidative stress","synonyms":[{"name":"increased transcription during glucose depletion and oxidative stress","type":"exact"},{"name":"increased transcription during glucose deprivation and oxidative stress","type":"exact"},{"name":"increased transcription during glucose limitation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation during oxidative stress","type":"exact"}],"termid":"FYPO:0002881"}


id: GO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a mineralocorticoid and transmitting the signal to the transcriptional machinery by binding to a specific DNA sequence in order to modulate transcription by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:20932876"],"gene_count":0,"genotype_count":0,"name":"obsolete mineralocorticoid receptor activity (obsolete GO:0017082)","synonyms":[{"name":"aldosterone receptor","type":"narrow"}],"termid":"GO:0017082"}


id: GO:0021694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar Purkinje cell layer. This process pertains to the initial formation of a structure from unspecified parts. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}


id: PBO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 21","termid":"PBO:0070997"}


id: FYPO:0000856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome positioning","synonyms":[{"name":"normal nucleosome occupancy","type":"related"},{"name":"normal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000856"}


id: PBO:0053049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 7, transcriptional regulator","termid":"PBO:0053049"}


id: GO:0035154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in an open tracheal system becomes capable of differentiating autonomously into a terminal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. Terminal cells send long and bifurcated hollow branches toward target tissues to allow oxygen exchange.","definition_xrefs":["PMID:10684581","PMID:11063940","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell type specification, open tracheal system","termid":"GO:0035153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal cell fate specification, open tracheal system","synonyms":[{"name":"terminal cell fate specification","type":"exact"}],"termid":"GO:0035154"}


id: PBO:0083069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0083069"}


id: PBO:0111739
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0111739"}


id: MOD:01585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and a glycine residue by an ester bond to form O-glycyl-L-serine.","definition_xrefs":["RESID:AA0495","PubMed:17502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(aminoacetyl)oxy]propanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Gly-Ser) (interchain with S-...)","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Ser-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-serine","type":"exact"},{"name":"O3-(aminoacetyl)serine","type":"exact"},{"name":"serine glycinate ester","type":"exact"}],"termid":"MOD:01585"}


id: PBO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB8 antisense RNA 1","termid":"PBO:0045198"}


id: PBO:0057283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR503 host gene","termid":"PBO:0057283"}


id: GO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion, where the carboxylic chain has 8 or fewer carbon atoms.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"short-chain carboxylesterase activity","synonyms":[{"name":"butyrate esterase activity","type":"narrow"},{"name":"butyryl esterase activity","type":"narrow"},{"name":"methylbutyrase activity","type":"narrow"},{"name":"methylbutyrate esterase activity","type":"narrow"},{"name":"monobutyrase activity","type":"narrow"},{"name":"propionyl esterase activity","type":"narrow"},{"name":"short-chain esterase activity","type":"broad"}],"termid":"GO:0034338"}


id: GO:0016144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-glycoside biosynthetic process","synonyms":[{"name":"S-glycoside anabolism","type":"exact"},{"name":"S-glycoside biosynthesis","type":"exact"},{"name":"S-glycoside formation","type":"exact"},{"name":"S-glycoside synthesis","type":"exact"},{"name":"thioglycoside biosynthesis","type":"exact"},{"name":"thioglycoside biosynthetic process","type":"exact"}],"termid":"GO:0016144"}


id: GO:0047257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + UDP-D-glucose = UDP + 1,2-diacyl-3-O-(alpha-D-glucopyranosyl(1,2)-O-alpha-D-glucopyranosyl)-sn-glycerol.","definition_xrefs":["MetaCyc:2.4.1.208-RXN","EC:2.4.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"diglucosyl diacylglycerol synthase activity","secondary_identifiers":["RHEA:19165"],"synonyms":[{"name":"DGlcDAG synthase activity","type":"related"},{"name":"MGlcDAG (1->2) glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol (1->2) glucosyltransferase activity","type":"related"},{"name":"diglucosyl diacylglycerol (DGlcDAG) synthase activity","type":"exact"},{"name":"monoglucosyl diacylglycerol (1->2) glucosyltransferase activity","type":"related"}],"termid":"GO:0047257"}


id: PR:O94514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02646","PANTHER:PTHR10894:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.10c","secondary_identifiers":["UniProtKB:O94514"],"synonyms":[{"name":"Spom972h-NOP56","type":"exact"},{"name":"ribosome biosynthesis protein sik1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94514"}


id: PBO:0057493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 611","termid":"PBO:0057493"}


id: GO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of mechanical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory transduction of mechanical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050974"}


id: GO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a sodium ion by a neuronal, voltage-insensitive channel that opens when an extracellular proton has been bound by the channel complex.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acid-sensing ion channel activity (obsolete GO:0044736)","synonyms":[{"name":"ASIC activity","type":"exact"}],"termid":"GO:0044736"}


id: GO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 5 subunits: two ATP-binding subunits, two membrane spanning subunits, and one substrate-binding subunit. In organisms with two membranes, the substrate-binding protein moves freely in the periplasmic space and joins the other subunits only when bound with substrate. In organisms with only one membrane the substrate-binding protein is tethered to the cytoplasmic membrane and associated with the other subunits. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing","termid":"GO:0055052"}


id: GO:0010455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate commitment","termid":"GO:0010455"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["EC:3.2.1.78","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannan 1,3-beta-mannosidase activity","synonyms":[{"name":"1,3-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,3-mannan 3-mannanohydrolase activity","type":"related"},{"name":"exo-1,3-beta-mannanase activity","type":"related"},{"name":"exo-1,3-mannanase activity","type":"related"},{"name":"exo-beta-1,3-mannase activity","type":"related"}],"termid":"GO:0052789"}


id: PR:Q9HGQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.02","synonyms":[{"name":"Spom972h-SPAC212.02","type":"exact"}],"termid":"PR:Q9HGQ0"}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: PBO:0084423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isozyme of methylenetetrahydrofolate reductase; catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway","termid":"PBO:0084423"}


id: GO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a germline cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"germline cell cycle switching, mitotic to meiotic cell cycle","synonyms":[{"name":"germline cell cycle switching, mitosis to meiosis","type":"narrow"},{"name":"germline conversion to meiosis","type":"narrow"},{"name":"germline conversion to meiotic cell cycle","type":"exact"},{"name":"germline entry into meiosis","type":"narrow"},{"name":"germline entry into meiotic cell cycle","type":"exact"},{"name":"germline initiation of meiosis","type":"narrow"},{"name":"germline initiation of meiotic cell cycle","type":"exact"},{"name":"germline meiotic entry","type":"narrow"}],"termid":"GO:0051729"}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: PBO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_inositol_phosphate_phosphatase_activity","termid":"PBO:0034520"}


id: FYPO:0001876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased during mitotic anaphase, and the protein is instead symmetrically localized to both SPBs.","definition_xrefs":["PomBase:mah","PMID:24920823","PMID:22419817","PMID:22119525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","termid":"FYPO:0001875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","synonyms":[{"name":"abnormally symmetric protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to mitotic spindle pole bodies during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to spindle pole bodies during mitotic anaphase","type":"exact"},{"name":"abolished asymmetric protein localization to old or new mitotic SPB","type":"related"},{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body during anaphase, with protein symmetrically localised to both spindle pole bodies","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies, during vegetative growth","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"}],"termid":"FYPO:0001876"}


id: PBO:0070007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1304, pseudogene","termid":"PBO:0070007"}


id: PBO:0067274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 352, pseudogene","termid":"PBO:0067274"}


id: PATO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000781 circulatory function value (obsolete PATO:0000781)","termid":"PATO:0000781"}


id: PBO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 43","termid":"PBO:0070813"}


id: PBO:0086562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR103C is not an essential gene","termid":"PBO:0086562"}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: PBO:0069836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1122, pseudogene","termid":"PBO:0069836"}


id: GO:0006057
data:
  {"annotated_genes":["SJAG_04316","SJAG_03082","SJAG_01491","SJAG_00816","SJAG_01021","SJAG_04906","SJAG_01264","SJAG_00598","SJAG_02519","SJAG_01276","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105153,101067,114443,94024,89166,96886,100212,102079,83699,100631,101182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein anabolism","type":"exact"},{"name":"mannoprotein biosynthesis","type":"exact"},{"name":"mannoprotein formation","type":"exact"},{"name":"mannoprotein synthesis","type":"exact"}],"termid":"GO:0006057","terms_by_termid":{"GO:0000032":null}}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: PBO:0059057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A","termid":"PBO:0059057"}


id: GO:0003430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte growth","synonyms":[{"name":"growth plate cartilage chondrocyte hypertrophy","type":"exact"}],"termid":"GO:0003430"}


id: PBO:0084980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; reduces many aldehyde compounds including glycolaldehyde, formaldehyde and furfural; transcription unregulated by furfural, 5-hydroxymethylfurfural (HMF) and the mycotoxin patulin; expression increased by multidrug resistance transcription factors Yrm1p and Yrr1p; member of atypical subgroup 7 of the short-chain dehydrogenase/reductase (SDR) family; localizes to the cytoplasm; SWAT-GFP and mCherry fusion proteins localize to the ER and vacuole respectively","termid":"PBO:0084980"}


id: PBO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 18, pseudogene","termid":"PBO:0060581"}


id: PATO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000112 humidity sensitivity (obsolete PATO:0000112)","termid":"PATO:0000112"}


id: GO:0141011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation by a siRNA.","definition_xrefs":["PMID:36570931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon silencing by mRNA destabilization","termid":"GO:0141008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"siRNA-mediated retrotransposon silencing by mRNA destabilization","synonyms":[{"name":"siRNA-mediated post-transcriptional retrotransposon silencing","type":"exact"}],"termid":"GO:0141011"}


id: PBO:0043820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase O","termid":"PBO:0043820"}


id: GO:0046511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine metabolic process","termid":"GO:0006667"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sphinganine biosynthetic process","synonyms":[{"name":"sphinganine synthesis","type":"exact"},{"name":"dihydrosphingosine biosynthesis","type":"exact"},{"name":"dihydrosphingosine biosynthetic process","type":"exact"},{"name":"sphinganine anabolism","type":"exact"},{"name":"sphinganine biosynthesis","type":"exact"},{"name":"sphinganine formation","type":"exact"}],"termid":"GO:0046511"}


id: GO:0050744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0353"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine (obsolete GO:0050744)","termid":"GO:0050744"}


id: GO:0046431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-4-hydroxymandelate, the anion of a hydroxylated derivative of mandelate (alpha-hydroxybenzeneacetate).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-4-hydroxymandelate metabolic process","synonyms":[{"name":"(R)-4-hydroxymandelate metabolism","type":"exact"}],"termid":"GO:0046431"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_00934","SJAG_01075","SJAG_01579","SJAG_00883","SJAG_02723","SJAG_03982","SJAG_02778","SJAG_03844"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88220,100221,103365,104294,108236,109423,110541],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[102778],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA chromatin silencing","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: PBO:0052595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 3","termid":"PBO:0052595"}


id: PBO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 3","termid":"PBO:0045726"}


id: GO:1903040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an exon-exon junction complex.","definition_xrefs":["GOC:TermGenie","GOC:sart","PMID:17606899","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"exon-exon junction complex assembly","synonyms":[{"name":"EJC assembly","type":"exact"},{"name":"EJC formation","type":"exact"},{"name":"exon-exon junction complex formation","type":"exact"}],"termid":"GO:1903040"}


id: GO:0102641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NADP = (R)-lactaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-lactaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-15743"],"termid":"GO:0102641"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: GO:0097700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to laminar fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","PMID:21768538","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"},{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to laminar fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to laminar fluid shear stress","type":"exact"}],"termid":"GO:0097700"}


id: SO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudoknots involved in recoding are unique in that, as they play their role as a structure, they are immediately unfolded and their now linear sequence serves as a template for decoding.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"},{"relation_name":"part_of","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_pseudoknot","synonyms":[{"name":"recoding pseudoknot","type":"exact"}],"termid":"SO:0000545"}


id: PBO:0026845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0026845"}


id: PBO:0045934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1 pseudogene 1","termid":"PBO:0045934"}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: GO:0035528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine in glycosidic linkage with uridine diphosphate, that contribute to the biosynthesis of chitin.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-N-acetylglucosamine biosynthesis involved in chitin biosynthesis (obsolete GO:0035528)","synonyms":[{"name":"UDP-GlcNAc biosynthesis involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine anabolism involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine formation involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine synthesis involved in chitin biosynthesis","type":"exact"}],"termid":"GO:0035528"}


id: PBO:0067279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 359, pseudogene","termid":"PBO:0067279"}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: PBO:0088946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific disordered protein","termid":"PBO:0088946"}


id: PBO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_position_uridine_thiolation","termid":"PBO:0026765"}


id: PBO:0057171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 323b","termid":"PBO:0057171"}


id: PBO:0111814
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0111814"}


id: GO:0006039
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97636,87912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin catabolic process","termid":"GO:0006032"},{"relation_name":"is_a","term_name":"cell wall chitin metabolic process","termid":"GO:0006037"},{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall chitin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall chitin breakdown","type":"exact"},{"name":"cell wall chitin catabolism","type":"exact"},{"name":"cell wall chitin degradation","type":"exact"}],"termid":"GO:0006039","terms_by_termid":{"GO:0034232":null}}


id: PBO:0086526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YCR025C is not an essential gene","termid":"PBO:0086526"}


id: GO:0015990
data:
  {"annotated_genes":["SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115092],"is_not":false,"summary":null,"term":"GO:0015990"}]},"cv_name":"biological_process","definition":"The transport of protons against an electrochemical gradient, using energy from electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"electron transport coupled proton transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015990","terms_by_termid":{"GO:0015990":null}}


id: FYPO:0003764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with one nucleus and no septum, and then die.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000004","FYPO:0001320","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with aseptate mononucleate cell","synonyms":[{"name":"inviable following spore germination, single or double cell division, arrest with aseptate mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with aseptate mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with aseptate mononucleate cell","type":"exact"}],"termid":"FYPO:0003764"}


id: PBO:0070895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 3","termid":"PBO:0070895"}


id: PBO:0049028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 15","termid":"PBO:0049028"}


id: PBO:0066961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 263","termid":"PBO:0066961"}


id: PBO:0079841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor D","termid":"PBO:0079841"}


id: GO:1900885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"negative regulation of tridecane metabolic process","termid":"GO:1900894"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"negatively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tridecane biosynthetic process","synonyms":[{"name":"down regulation of tridecane anabolism","type":"exact"},{"name":"down regulation of tridecane biosynthesis","type":"exact"},{"name":"down regulation of tridecane biosynthetic process","type":"exact"},{"name":"down regulation of tridecane formation","type":"exact"},{"name":"down regulation of tridecane synthesis","type":"exact"},{"name":"down-regulation of tridecane anabolism","type":"exact"},{"name":"down-regulation of tridecane biosynthesis","type":"exact"},{"name":"down-regulation of tridecane biosynthetic process","type":"exact"},{"name":"down-regulation of tridecane formation","type":"exact"},{"name":"down-regulation of tridecane synthesis","type":"exact"},{"name":"downregulation of tridecane anabolism","type":"exact"},{"name":"downregulation of tridecane biosynthesis","type":"exact"},{"name":"downregulation of tridecane biosynthetic process","type":"exact"},{"name":"downregulation of tridecane formation","type":"exact"},{"name":"downregulation of tridecane synthesis","type":"exact"},{"name":"inhibition of tridecane anabolism","type":"narrow"},{"name":"inhibition of tridecane biosynthesis","type":"narrow"},{"name":"inhibition of tridecane biosynthetic process","type":"narrow"},{"name":"inhibition of tridecane formation","type":"narrow"},{"name":"inhibition of tridecane synthesis","type":"narrow"},{"name":"negative regulation of tridecane anabolism","type":"exact"},{"name":"negative regulation of tridecane biosynthesis","type":"exact"},{"name":"negative regulation of tridecane formation","type":"exact"},{"name":"negative regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900885"}


id: GO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The phragmoplast is a plant cell specific cytoplasmic structure composed of cytoskeletal polymers, membranes, and associated cytosolic proteins that functions as the focused secretory module for assembling the cell plate.","definition_xrefs":["PMID:28943203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phragmoplast","secondary_identifiers":["Wikipedia:Phragmoplast"],"termid":"GO:0009524"}


id: GO:0008879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + dTTP = diphosphate + dTDP-glucose.","definition_xrefs":["EC:2.7.7.24","RHEA:15225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glucose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:DTDPGLUCOSEPP-RXN","KEGG_REACTION:R02328"],"synonyms":[{"name":"TDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose diphosphorylase activity","type":"related"},{"name":"dTDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose synthase activity","type":"related"},{"name":"dTTP:alpha-D-glucose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"glucose 1-phosphate thymidylyltransferase activity","type":"related"},{"name":"thymidine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"thymidine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0008879"}


id: GO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonyl-L-leucine + H2O + H+ = L-leucine + benzyl alcohol + CO2.","definition_xrefs":["RHEA:18901","EC:3.5.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N(alpha)-benzyloxycarbonylleucine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02552","MetaCyc:3.5.1.64-RXN"],"synonyms":[{"name":"alpha-N-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylleucine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase IV","type":"related"},{"name":"nalpha-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonylleucine hydrolase activity","type":"related"}],"termid":"GO:0047413"}


id: GO:0160179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which iron is taken up from the contents of the intestine.","definition_xrefs":["PMID:17729393","PMID:16054062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal iron absorption","termid":"GO:0160179"}


id: PBO:0017418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformation_of","termid":"PBO:0017418"}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: PBO:0060918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 5","termid":"PBO:0060918"}


id: PBO:0089701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec62","termid":"PBO:0089701"}


id: PBO:0064667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 2","termid":"PBO:0064667"}


id: PBO:0081780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 707","termid":"PBO:0081780"}


id: PBO:0081426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280D","termid":"PBO:0081426"}


id: PBO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nyctalopin","termid":"PBO:0061754"}


id: SO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminator signal for RNA polymerase III transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_terminator","termid":"SO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator_of_type_2_RNApol_III_promoter","synonyms":[{"name":"terminator of type 2 RNApol III promoter","type":"exact"}],"termid":"SO:0000615"}


id: MOD:00246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form glycine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0241","PubMed:8183941","PubMed:8895467","ChEBI:21276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine thiazole-4-carboxylic acid","synonyms":[{"name":"2-(aminomethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-(azanylmethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Gly-Cys)","type":"exact"},{"name":"glycine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00246"}


id: GO:0039615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=1 symmetry. The T=1 capsid is composed of 12 pentameric capsomeres.","definition_xrefs":["VZ:1057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=1 icosahedral viral capsid","termid":"GO:0039615"}


id: GO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062003"}


id: GO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the anther wall tapetum. This process pertains to the initial formation of a structure from unspecified parts. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:tb","GOC:sm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"},{"relation_name":"part_of","term_name":"anther wall tapetum morphogenesis","termid":"GO:0048655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum formation","synonyms":[{"name":"tapetal layer formation","type":"broad"},{"name":"tapetum formation","type":"broad"}],"termid":"GO:0048656"}


id: PBO:0040824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 2","termid":"PBO:0040824"}


id: GO:0102779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cannabigerolate + O2 = cannabidiolate + hydrogen peroxide.","definition_xrefs":["RHEA:34411","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cannabidiolate synthase activity","secondary_identifiers":["EC:1.21.3.8","MetaCyc:RXN-7855"],"termid":"GO:0102779"}


id: GO:0044469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant activation, maintenance or an increase in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044469"}


id: PBO:0073702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 2","termid":"PBO:0073702"}


id: GO:1902775
data:
  {"annotated_genes":["SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104513],"is_not":false,"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:24206665","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"},{"relation_name":"part_of","term_name":"mitochondrial ribosome assembly","termid":"GO:0061668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0065003"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"39S ribosomal subunit, mitochondrial assembly","type":"narrow"},{"name":"39S ribosomal subunit, mitochondrial formation","type":"narrow"},{"name":"mitochondrial large ribosomal subunit formation","type":"exact"}],"termid":"GO:1902775","terms_by_termid":{"GO:1902775":null}}


id: PBO:0074103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 6","termid":"PBO:0074103"}


id: PBO:0086008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086008"}


id: FYECO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mannose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mannose","termid":"FYECO:0000152"}


id: SO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:006"],"synonyms":[{"name":"N6 isopentenyladenosine","type":"exact"},{"name":"N6-isopentenyladenosine","type":"exact"},{"name":"i6A","type":"exact"}],"termid":"SO:0001300"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: PBO:0111343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp1","termid":"PBO:0111343"}


id: PBO:0073258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 2","termid":"PBO:0073258"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["loinc:LA6687-3","SO:1000034"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: PBO:0053809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1068","termid":"PBO:0053809"}


id: GO:0021800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex cell migration","termid":"GO:0021795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration","termid":"GO:0021800"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: PBO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 4","termid":"PBO:0071663"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: GO:0007556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"regulation of juvenile hormone metabolic process","synonyms":[{"name":"regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0007556"}


id: PR:O94294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sog2 gene.","definition_xrefs":["UniProtKB:O94294","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat-containing protein sog2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.09c","synonyms":[{"name":"Spom972h-sog2","type":"exact"}],"termid":"PR:O94294"}


id: GO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the spontaneous opening of the fruit permitting the escape of seeds.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit dehiscence","termid":"GO:0010047"}


id: PBO:0044130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 16, pseudogene","termid":"PBO:0044130"}


id: FYPO:0000198
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115424],"is_not":false,"summary":null,"term":"FYPO:0000198"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of actin cytoskeleton polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"abnormal establishment or maintenance of actin cytoskeleton polarity during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actin cytoskeleton polarisation during vegetative growth","type":"related"},{"name":"abnormal actin cytoskeleton polarization during vegetative growth","type":"related"},{"name":"abnormal establishment or maintenance of actin cytoskeleton polarity during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000198","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0036003"}


id: GO:0006856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of eye pigment precursors, the inactive forms of visual pigments, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"eye pigment precursor transport","termid":"GO:0006856"}


id: PBO:0069927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1219, pseudogene","termid":"PBO:0069927"}


id: SO:1001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory region, the stem-loop secondary structural element is downstream of the redefined region.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_stem_loop_structure","synonyms":[{"name":"three prime stem loop structure","type":"exact"}],"termid":"SO:1001279"}


id: GO:0110018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate circRNA translation.","definition_xrefs":["PMID:28344080","PMID:28281539","GOC:sp","PMID:28344082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"cap-independent translational initiation of circular RNA","synonyms":[{"name":"cap-independent translational initiation of circRNA","type":"exact"}],"termid":"GO:0110018"}


id: PBO:0078427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 4-1","termid":"PBO:0078427"}


id: PBO:0031097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_mitotic_spindle","termid":"PBO:0031097"}


id: PBO:0039453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 1","termid":"PBO:0039453"}


id: PBO:0054475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: PBO:0077017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 4","termid":"PBO:0077017"}


id: GO:0004115
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112501],"is_not":false,"summary":null,"term":"GO:0004115"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic AMP + H2O = AMP + H+.","definition_xrefs":["RHEA:25277","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3',5'-cyclic-AMP phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-111962","Reactome:R-HSA-418553","MetaCyc:RXN0-5038","Reactome:R-HSA-9629675","Reactome:R-HSA-9705507","Reactome:R-HSA-9644869","Reactome:R-HSA-9708261","EC:3.1.4.53"],"synonyms":[{"name":"3',5' cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-AMP-specific phosphodiesterase activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-specific phosphodiesterase activity","type":"exact"},{"name":"cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic AMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0004115","terms_by_termid":{"GO:0004115":null}}


id: PBO:0029399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm","termid":"PBO:0029399"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: PBO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member pseudogene 19","termid":"PBO:0050692"}


id: GO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature morphogenesis","synonyms":[{"name":"cardiac blood vessel morphogenesis","type":"exact"},{"name":"cardiac vasculature morphogenesis","type":"exact"},{"name":"coronary blood vessel morphogenesis","type":"exact"},{"name":"heart blood vessel morphogenesis","type":"exact"},{"name":"heart vasculature morphogenesis","type":"exact"}],"termid":"GO:0060977"}


id: GO:0047207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->2)-beta-D-fructosyl](n) + [(1->2)-beta-D-fructosyl](m) = [(1->2)-beta-D-fructosyl](n+1) + [(1->2)-beta-D-fructosyl](m-1).","definition_xrefs":["MetaCyc:2.4.1.100-RXN","EC:2.4.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"1,2-beta-fructan 1F-fructosyltransferase activity","synonyms":[{"name":"1,2-beta-D-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan 1F-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"2,1-beta-D-fructan:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"},{"name":"2,1-fructan:2,1-fructan 1-fructosyltransferase activity","type":"related"},{"name":"FFT activity","type":"related"},{"name":"fructan:fructan fructosyl transferase activity","type":"related"}],"termid":"GO:0047207"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: PBO:0003287
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA interacting protein","termid":"PBO:0003287"}


id: GO:1905449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18832707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905449"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: GO:0047920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geissoschizine + NADP+ = 4,21-dehydrogeissoschizine + H+ + NADPH.","definition_xrefs":["EC:1.3.1.36","RHEA:11376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"geissoschizine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03860","MetaCyc:GEISSOSCHIZINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"geissoschizine:NADP+ 4,21-oxidoreductase activity","type":"related"}],"termid":"GO:0047920"}


id: PBO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase pseudogene 1","termid":"PBO:0048678"}


id: PBO:0056987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30e","termid":"PBO:0056987"}


id: PBO:0079070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 4-1","termid":"PBO:0079070"}


id: PR:O43068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde4 gene.","definition_xrefs":["UniProtKB:O43068","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin complex subunit mde4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.04","synonyms":[{"name":"Spom972h-mde4","type":"exact"},{"name":"mei4-dependent protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43068"}


id: PBO:0056957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-2","termid":"PBO:0056957"}


id: PBO:0085783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the Sec1p/Munc-18 family; essential for vacuolar protein sorting; required for the function of Pep12p and the early endosome/late Golgi SNARE Tlg2p; essential for fusion of Golgi-derived vesicles with the prevacuolar compartment; mutation in human VPS45 is associated with congenital neutropenia and primary myelofibrosis of infancy","termid":"PBO:0085783"}


id: PBO:0083373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CDC21/YOR074C; identified by RT-PCR","termid":"PBO:0083373"}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: GO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and ordering of the envelope of pronuclei.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear envelope organization","termid":"GO:0006998"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"pronuclear envelope synthesis","termid":"GO:0018985"}


id: PBO:0070054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 11, pseudogene","termid":"PBO:0070054"}


id: PBO:0082388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex","termid":"PBO:0082388"}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: GO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils.","definition_xrefs":["PMID:21421911","PMID:19693541","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen beaded filament","termid":"GO:0098647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type VI trimer","termid":"GO:0005589"}


id: GO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylphylloquinone + S-adenosyl-L-methionine = phylloquinone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["MetaCyc:RXN-7569","PMID:14617060","MetaCyc:RXN-6723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-phytyl-1,4-naphthoquinone methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06859"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-phytyl-1,4-naphthoquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:salicylate carboxyl methyltransferase activity","type":"exact"},{"name":"SA methyltransferase activity","type":"broad"},{"name":"demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"salicylate methyltransferase activity","type":"broad"},{"name":"salicylic acid methyltransferase activity","type":"broad"}],"termid":"GO:0052624"}


id: PBO:0042917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR antisense RNA 1","termid":"PBO:0042917"}


id: PBO:0007992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A, intrinsic regulator Rrd1 (predicted)","termid":"PBO:0007992"}


id: PBO:0078621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 69","termid":"PBO:0078621"}


id: PBO:0054032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1363","termid":"PBO:0054032"}


id: FYPO:0007870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:34533984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell side, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007870"}


id: PATO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000660 angle_quantity (obsolete PATO:0000660)","termid":"PATO:0000660"}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["UniProtKB:Q09823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: PBO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 44","termid":"PBO:0044357"}


id: PBO:0056330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 11","termid":"PBO:0056330"}


id: PBO:0034681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0034681"}


id: GO:0008036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a diuretic hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"diuretic hormone receptor activity","termid":"GO:0008036"}


id: PBO:0076971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 2","termid":"PBO:0076971"}


id: GO:0021985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis development","synonyms":[{"name":"neurophysis development","type":"exact"},{"name":"posterior pituitary development","type":"exact"},{"name":"posterior pituitary gland development","type":"exact"}],"termid":"GO:0021985"}


id: GO:0060883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates interactions between a cell and its surroundings that modulates of the rate, frequency or extent of basement membrane disassembly involved in semicircular canal fusion.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication (obsolete GO:0060883)","synonyms":[{"name":"regulation of basal lamina disassembly involved in semicircular canal fusion by cell communication","type":"related"}],"termid":"GO:0060883"}


id: PBO:0073927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 14 pseudogene 1","termid":"PBO:0073927"}


id: GO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 27 of the histone.","definition_xrefs":["PMID:20023638","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 demethylation (obsolete GO:0071557)","synonyms":[{"name":"H3K27 demethylation","type":"related"}],"termid":"GO:0071557"}


id: GO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dGTP + H2O = dGMP + H+ + diphosphate.","definition_xrefs":["RHEA:28362","PMID:22531138","GOC:dgf","PMID:17090528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"dGTP diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R01855"],"synonyms":[{"name":"2'-deoxyguanosine 5'-triphosphate diphosphohydrolase","type":"exact"},{"name":"dGTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036217"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: GO:0120148
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure in a host cell comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cytoskeleton","termid":"GO:0044163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell centrosome","synonyms":[{"name":"host centrosome","type":"exact"}],"termid":"GO:0120148"}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: PBO:0078158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 36/delta variable 7","termid":"PBO:0078158"}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11124:SF3","OMA:SCHPO01555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: MOD:00900
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","termid":"MOD:00898"},{"relation_name":"is_a","term_name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"(R)-2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]thiopropanoic acid","type":"exact"}],"termid":"MOD:00900"}


id: PBO:0074425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 24","termid":"PBO:0074425"}


id: GO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","PMID:11262869","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron differentiation","termid":"GO:0021514"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: GO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lactate channel activity (obsolete GO:0015261)","synonyms":[{"name":"lactate channel activity","type":"exact"}],"termid":"GO:0015261"}


id: FYPO:0007930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of phloxine B and hydrogen peroxide. Cells stop growing (and may die) at concentrations of phloxine B and hydrogen peroxide that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to phloxine B and hydrogen peroxide","termid":"FYPO:0007930"}


id: PBO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 1","termid":"PBO:0061927"}


id: PBO:0063804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA2 antisense RNA 1","termid":"PBO:0063804"}


id: FYPO:0000690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased oxidoreductase activity","synonyms":[{"name":"reduced oxidoreductase activity","type":"exact"}],"termid":"FYPO:0000690"}


id: PBO:0056201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A9B","termid":"PBO:0056201"}


id: PBO:0049270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like","termid":"PBO:0049270"}


id: PBO:0034575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_SUMO_conjugate_level","termid":"PBO:0034575"}


id: SO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The transit_peptide is a short region at the N-terminus of the peptide that directs the protein to an organelle (chloroplast, mitochondrion, microbody or cyanelle).","direct_ancestors":[{"relation_name":"derives_from","term_name":"transit_peptide_region_of_CDS","termid":"SO:0002252"},{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"transit_peptide","secondary_identifiers":["BS:00055"],"synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"signal","type":"related"},{"name":"transit","type":"related"},{"name":"transit peptide","type":"exact"}],"termid":"SO:0000725"}


id: PBO:0046668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor alpha","termid":"PBO:0046668"}


id: PBO:0089810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type","termid":"PBO:0089810"}


id: PBO:0068215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 522","termid":"PBO:0068215"}


id: MOD:00450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this isotopic label from Unimod entry 57 is deprecated","definition_xrefs":["PubMed:11857757"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00450 acetate labeling reagent light form (K) (obsolete MOD:00450)","termid":"MOD:00450"}


id: PBO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase, unknown biological role","termid":"PBO:0002073"}


id: PBO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3","termid":"PBO:0042443"}


id: GO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"negatively_regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","synonyms":[{"name":"down regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"down-regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"downregulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"inhibition of humoral immune response mediated by circulating immunoglobulin","type":"narrow"}],"termid":"GO:0002924"}


id: PBO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 19","termid":"PBO:0044336"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["GOC:rz","PMID:20805556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: PBO:0086274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with an N-terminal kelch-like domain; putative negative regulator of early meiotic gene expression; required, with Mds3p, for growth under alkaline conditions; PMD1 has a paralog, MDS3, that arose from the whole genome duplication","termid":"PBO:0086274"}


id: PATO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000474 shattering value (obsolete PATO:0000474)","termid":"PATO:0000474"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: GO:1902882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:16899554","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to oxidative stress","termid":"GO:1902882"}


id: SO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box C/D family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_primary_transcript","synonyms":[{"name":"C/D box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000595"}


id: PBO:0082369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) transcription factor of the myc-family; activates transcription cooperatively with Pho2p in response to phosphate limitation; binding to 'CACGTG' motif is regulated by chromatin restriction, competitive binding of Cbf1p to the same DNA binding motif and cooperation with Pho2p; function is regulated by phosphorylation at multiple sites and by phosphate availability","termid":"PBO:0082369"}


id: PBO:0077098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A pseudogene 1","termid":"PBO:0077098"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: SO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Peptide nucleic acid, is a chemical not known to occur naturally but is artificially synthesized and used in some biological research and medical treatments. The PNA backbone is composed of repeating N-(2-aminoethyl)-glycine units linked by peptide bonds. The purine and pyrimidine bases are linked to the backbone by methylene carbonyl bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"PNA","termid":"SO:0001184"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Peptide_nucleic_acid"],"synonyms":[{"name":"PNA oligo","type":"exact"},{"name":"peptide nucleic acid","type":"exact"}],"termid":"SO:0001011"}


id: PBO:0059458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minisatellite binding protein 2","termid":"PBO:0059458"}


id: PBO:0074282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT2 intronic transcript 1","termid":"PBO:0074282"}


id: PR:O14285
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc34 gene.","definition_xrefs":["UniProtKB:O14285","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.17c","synonyms":[{"name":"Spom972h-spc34","type":"exact"},{"name":"outer kinetochore protein spc34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14285"}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: PBO:0051382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 7-3 (pseudogene)","termid":"PBO:0051382"}


id: PBO:0053747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 974","termid":"PBO:0053747"}


id: GO:0043386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mycotoxin biosynthetic process","synonyms":[{"name":"mycotoxin anabolism","type":"exact"},{"name":"mycotoxin biosynthesis","type":"exact"},{"name":"mycotoxin formation","type":"exact"},{"name":"mycotoxin synthesis","type":"exact"}],"termid":"GO:0043386"}


id: PBO:0050659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 beta family member 2, pseudogene","termid":"PBO:0050659"}


id: PBO:0038804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 8","termid":"PBO:0038804"}


id: PBO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase 2","termid":"PBO:0060419"}


id: PBO:0041627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 A","termid":"PBO:0041627"}


id: GO:0048310
data:
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id: PBO:0056397
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id: GO:0044770
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id: PBO:0069214
data:
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id: PBO:0056702
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id: PBO:0074253
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id: FYPO:0003460
data:
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id: GO:0033547
data:
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