# terms

id: GO:0006434
data:
  {"annotated_genes":["SJAG_04762","SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91573],"is_not":false,"summary":null,"term":"GO:0006434"},{"annotations":[90800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"}]},"cv_name":"biological_process","definition":"The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. The seryl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a serine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"seryl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006434","terms_by_termid":{"GO:0006434":null,"GO:0070158":null}}


id: PBO:0072113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 2","termid":"PBO:0072113"}


id: RO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x","direct_ancestors":[{"relation_name":"is_a","term_name":"adjacent_to","termid":"RO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounded_by","termid":"RO:0002219"}


id: PBO:0063939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 4","termid":"PBO:0063939"}


id: GO:0072244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular epithelium over time, from its formation to the mature structure. The metanephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the metanephros. The metanephric glomerular epithelium consists of both parietal and visceral epithelium. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelium development","termid":"GO:0072244"}


id: GO:0140737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular non-membrane bound organelle, consisting of proteinaceous polyhedral shells that encapsulate enzymes, protecting the contents from their surrounding milieu and/or the milieu from reactants in their interior. The self-assembling, 25-42 nm nanocompartment shell, unlike larger bacterial microcompartments, is made of only one protein, and has only a few proteins inside. Shells about vary from about 25-42 nm in diameter. The shell protein has an HK97-like fold and probably evolved from a viral protein. Artificial encapsulin nanocompartments can be expressed and filled with cargo proteins for biotechnological uses. They are found in many bacterial and a few archaeal phyla.","definition_xrefs":["PMID:32918485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"encapsulin nanocompartment","synonyms":[{"name":"protein nanocompartment","type":"broad"}],"termid":"GO:0140737"}


id: MOD:01261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#C","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site S","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01261"}


id: PBO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q21)","termid":"PBO:0047885"}


id: FYPO:0003078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to DNA damage","termid":"FYPO:0002898"},{"relation_name":"is_a","term_name":"abolished protein autophosphorylation during vegetative growth","termid":"FYPO:0003020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein autophosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein autophosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein autophosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein autophosphorylation abolished during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003078"}


id: PBO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 3","termid":"PBO:0052110"}


id: PBO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 3","termid":"PBO:0060204"}


id: PBO:0052211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 divergent transcript","termid":"PBO:0052211"}


id: GO:2001275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose import in response to insulin stimulus (obsolete GO:2001275)","synonyms":[{"name":"positive regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001275"}


id: PBO:0064308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 3","termid":"PBO:0064308"}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: PBO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transmembrane transporter Thi9","termid":"PBO:0017591"}


id: GO:0052799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of a bicyclic nitroimidazole into simpler components in a process that requires coenzyme F420 and produces reactive nitrogen species. Hydride, from reduced coenzyme F420, is added to the bicyclic nitroimidazole, resulting in unstable substances that break down to form three stable products. The elimination of nitrous acid produces the corresponding des-nitroimidazole; hydrolysis produces a related compound; and further reduction creates an aromatic hydroxylamine metabolite that degrades further. These reactions release hyponitrous acid and nitrous acid, which is unstable and disproportionates into nitric oxide (NO) and other reactive nitrogen intermediates.","definition_xrefs":["PMID:19039139","GOC:mengo_curators","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole catabolic process","termid":"GO:0052800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:0052799"}


id: GO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of germline gene segments encoding immunoglobulin superfamily domains. Recombined receptors for antigen encoded by immunoglobulin superfamily domains include T cell receptors and immunoglobulins (antibodies) produced by B cells. The first encounter with antigen elicits a primary immune response that is slow and not of great magnitude. T and B cells selected by antigen become activated and undergo clonal expansion. A fraction of antigen-reactive T and B cells become memory cells, whereas others differentiate into effector cells. The memory cells generated during the primary response enable a much faster and stronger secondary immune response upon subsequent exposures to the same antigen (immunological memory). An example of this is the adaptive immune response found in Mus musculus.","definition_xrefs":["GOC:add","GOC:mtg_sensu","ISBN:0781735149","ISBN:1405196831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}


id: PBO:0087155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA","termid":"PBO:0087155"}


id: PBO:0065232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13","termid":"PBO:0065232"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: PBO:0027487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_G0","termid":"PBO:0027487"}


id: PBO:0111887
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111887"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: FYPO:0006757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is normal (i.e. indistinguishable from wild type) when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:28934464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"normal chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"normal chromatin binding at promoter element during glucose deprivation","type":"related"}],"termid":"FYPO:0006757"}


id: PBO:0085615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085615"}


id: PATO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001056 number (obsolete PATO:0001056)","termid":"PATO:0001056"}


id: PR:O74964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.03","synonyms":[{"name":"RSC complex subunit rsc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc1","type":"exact"},{"name":"remodel the structure of chromatin complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74964"}


id: PBO:0049525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z variant histone 1","termid":"PBO:0049525"}


id: GO:0008179
data:
  {"annotated_genes":["SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69320],"is_not":false,"summary":null,"term":"GO:0008179"}]},"cv_name":"molecular_function","definition":"Binding to an adenylate cyclase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"adenylate cyclase binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-170672"],"synonyms":[{"name":"adenylyl cyclase binding","type":"exact"}],"termid":"GO:0008179","terms_by_termid":{"GO:0008179":null}}


id: PBO:0084047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating factor for Rsr1p/Bud1p; plays a role in spindle position checkpoint distinct from its role in bud site selection; required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types; contains two PH-like domains","termid":"PBO:0084047"}


id: PBO:0069196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 450, pseudogene","termid":"PBO:0069196"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: GO:0042243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an asexual spore wall, the specialized envelope lying outside the cell membrane of a spore derived from an asexual process. Examples of this process are found in Bacterial and Fungal species.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"part_of","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"asexual spore wall assembly","synonyms":[{"name":"asexual spore wall formation","type":"exact"}],"termid":"GO:0042243"}


id: GO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.","definition_xrefs":["GOC:rph","PMID:16903353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell junction","termid":"GO:0044156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasmodesma","termid":"GO:0044219"}


id: PBO:0076307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 3","termid":"PBO:0076307"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: PBO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_biogenesis","termid":"PBO:0030326"}


id: PBO:0075441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted protein acidic and cysteine rich","termid":"PBO:0075441"}


id: GO:2001235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"positively_regulates","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of apoptotic signaling pathway","synonyms":[{"name":"positive regulation of apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001235"}


id: GO:0042898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:12543685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fosmidomycin transmembrane transporter activity","synonyms":[{"name":"fosmidomycin transporter activity","type":"related"}],"termid":"GO:0042898"}


id: GO:0097497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"blood vessel endothelial cell delamination","termid":"GO:0097497"}


id: PBO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus splice sites","termid":"PBO:0003021"}


id: GO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NADP+ = H+ + mevaldate + NADPH.","definition_xrefs":["EC:1.1.1.33","RHEA:20193"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADPH) activity (obsolete GO:0019726)","synonyms":[{"name":"(R)-mevalonate:NADP+ oxidoreductase","type":"related"},{"name":"mevaldate (reduced nicotinamide adenine dinucleotide phosphate) reductase","type":"related"}],"termid":"GO:0019726"}


id: GO:0085024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Sec complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by Sec complex (obsolete GO:0085024)","synonyms":[{"name":"modification by symbiont of host morphology or physiology via protein secreted by the Sec secretion system","type":"exact"}],"termid":"GO:0085024"}


id: PR:O74430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C1672.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.09","synonyms":[{"name":"Spom972h-SPCC1672.09","type":"exact"}],"termid":"PR:O74430"}


id: PBO:0087479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1); chromatin assembly by CAF-1 affects multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure; deactivation of DNA damage checkpoint after DNA repair; chromatin dynamics during transcription; and repression of divergent noncoding transcription; Msi1p localizes to nucleus and cytoplasm and independently regulates the RAS/cAMP pathway via sequestration of Npr1p kinase","termid":"PBO:0087479"}


id: MOD:01870
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems mTRAQ reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ reporter fragment","termid":"MOD:01870"}


id: GO:0031944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucocorticoid metabolic process","synonyms":[{"name":"down regulation of glucocorticoid metabolic process","type":"exact"},{"name":"down-regulation of glucocorticoid metabolic process","type":"exact"},{"name":"downregulation of glucocorticoid metabolic process","type":"exact"},{"name":"inhibition of glucocorticoid metabolic process","type":"narrow"},{"name":"negative regulation of glucocorticoid metabolism","type":"exact"}],"termid":"GO:0031944"}


id: PBO:0027865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation","termid":"PBO:0027865"}


id: PBO:0035958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035958"}


id: PBO:0082115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs1p, acetyl-coA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions","termid":"PBO:0082115"}


id: PBO:0079450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor 2, mitochondrial calcium regulator","termid":"PBO:0079450"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108974],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["GOC:rb","PMID:21670217","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: GO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.","definition_xrefs":["PMID:22988102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016780"],"is_obsolete":false,"name":"phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity","synonyms":[{"name":"cardiolipin synthase","type":"related"}],"termid":"GO:0090483"}


id: GO:0102495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A3 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GA5 3beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14318"],"termid":"GO:0102495"}


id: PBO:0038579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1","termid":"PBO:0038579"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: PBO:0083876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box receptor protein; subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex; binds to phosphorylated Ho endonuclease, allowing its ubiquitination by SCF and subsequent degradation","termid":"PBO:0083876"}


id: PBO:0068183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 490","termid":"PBO:0068183"}


id: PBO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10A","termid":"PBO:0043667"}


id: PBO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0000376"}


id: GO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"histidine catabolic process to 2-oxoglutarate","synonyms":[{"name":"histidine breakdown to 2-oxoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"histidine catabolism to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-oxoglutarate","type":"exact"},{"name":"histidine degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019558"}


id: PBO:0045151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 antisense RNA 1","termid":"PBO:0045151"}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: PBO:0054246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1628","termid":"PBO:0054246"}


id: PBO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr4","termid":"PBO:0003854"}


id: PR:O14343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp5 gene.","definition_xrefs":["UniProtKB:O14343","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.13","synonyms":[{"name":"Spom972h-klp5","type":"exact"}],"termid":"PR:O14343"}


id: GO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AMPA glutamate receptor activity.","definition_xrefs":["GOC:bc","PMID:20739563","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of glutamate receptor signaling pathway","termid":"GO:1900450"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"regulation of AMPA receptor activity","termid":"GO:2000311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of AMPA receptor activity","termid":"GO:0061907"}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: PBO:0006192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_presence_of","termid":"PBO:0006192"}


id: GO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MIT protein domain. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.","definition_xrefs":["GOC:pm","InterPro:IPR007330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MIT domain binding","termid":"GO:0090541"}


id: GO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell along the developing anterior lateral line, originating from cranial ectodermal placodes situated between the eye and the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.","definition_xrefs":["PMID:15832385","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast primordium migration","termid":"GO:0048883"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast primordium migration","synonyms":[{"name":"ALL neuromast primordium migration","type":"exact"}],"termid":"GO:0048900"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: PBO:0092004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit (21S) rRNA, rnl","termid":"PBO:0092004"}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["GOC:dgf","MetaCyc:SUCUTIL-PWY","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: GO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell cytokine production","synonyms":[{"name":"down regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of myeloid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002734"}


id: PBO:0042194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3 pseudogene 1","termid":"PBO:0042194"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: GO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).","definition_xrefs":["GOC:sm","Wikipedia:X-ray"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to X-ray","synonyms":[{"name":"response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:0010165"}


id: PBO:0051144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-22 (pseudogene)","termid":"PBO:0051144"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: PBO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 23","termid":"PBO:0071364"}


id: FYPO:0006752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at subtelomere during vegetative growth","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin region during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased subtelomeric heterochromatin histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006752"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:22357537","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: PBO:0040523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-azacytidine induced 2","termid":"PBO:0040523"}


id: FYPO:0007735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is increased during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"increased condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"increased protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"increased protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007735"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN","EC:1.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: GO:0071303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B3 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B3","termid":"GO:0033552"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B3","synonyms":[{"name":"cellular response to niacin","type":"narrow"},{"name":"cellular response to nicotinamide","type":"narrow"}],"termid":"GO:0071303"}


id: GO:0042315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides, preferentially hydrophobic dipeptides including prolyl amino acids.","definition_xrefs":["EC:3.4.13.18"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosol nonspecific dipeptidase activity (obsolete GO:0042315)","synonyms":[{"name":"Gly-Leu hydrolase activity","type":"related"},{"name":"L-amino-acyl-L-amino-acid hydrolase activity","type":"related"},{"name":"L-prolylglycine dipeptidase activity","type":"related"},{"name":"N(2)-beta-alanylarginine dipeptidase activity","type":"narrow"},{"name":"N2-beta-alanylarginine dipeptidase activity","type":"related"},{"name":"Pro-X dipeptidase activity","type":"narrow"},{"name":"cytosol non-specific dipeptidase activity","type":"related"},{"name":"cytosol nonspecific dipeptidase activity","type":"exact"},{"name":"diglycinase activity","type":"related"},{"name":"glycyl-L-leucine dipeptidase activity","type":"related"},{"name":"glycyl-L-leucine hydrolase activity","type":"related"},{"name":"glycyl-L-leucine peptidase activity","type":"related"},{"name":"glycyl-glycine dipeptidase activity","type":"narrow"},{"name":"glycyl-leucine dipeptidase activity","type":"narrow"},{"name":"glycylleucine dipeptide hydrolase activity","type":"related"},{"name":"glycylleucine hydrolase activity","type":"related"},{"name":"glycylleucine peptidase activity","type":"related"},{"name":"human cytosolic non-specific dipeptidase activity","type":"related"},{"name":"iminodipeptidase activity","type":"related"},{"name":"non-specific dipeptidase activity","type":"related"},{"name":"peptidase A activity","type":"broad"},{"name":"prolinase activity","type":"narrow"},{"name":"prolyl dipeptidase activity","type":"narrow"},{"name":"prolylglycine dipeptidase activity","type":"narrow"}],"termid":"GO:0042315"}


id: PBO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB antisense RNA 1","termid":"PBO:0060234"}


id: PBO:0034458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034458"}


id: GO:0008715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + H2O = a phosphatidate + CMP + 2 H+.","definition_xrefs":["EC:3.6.1.26","RHEA:15221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"CDP-diacylglycerol diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R01797","MetaCyc:CDPDIGLYPYPHOSPHA-RXN"],"synonyms":[{"name":"CDP diacylglycerol hydrolase activity","type":"related"},{"name":"CDP-diacylglycerol phosphatidylhydrolase activity","type":"related"},{"name":"CDP-diacylglycerol pyrophosphatase activity","type":"exact"},{"name":"cytidine diphosphodiacylglycerol pyrophosphatase activity","type":"related"}],"termid":"GO:0008715"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: PBO:0083934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN2 has a paralog, CLN1, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083934"}


id: PR:O13825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immediate early response 3-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15858:SF0","OMA:SCHPO01030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.09","secondary_identifiers":["UniProtKB:O13825"],"synonyms":[{"name":"Spom972h-IER3IP1","type":"exact"}],"termid":"PR:O13825"}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: PBO:0067946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 248","termid":"PBO:0067946"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: GO:0043233
data:
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id: GO:0008048
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of guanylate cyclase in response to a change in calcium ion concentration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylate cyclase activator activity","termid":"GO:0030250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"calcium sensitive guanylate cyclase activator activity","termid":"GO:0008048"}


id: PBO:0055086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2504","termid":"PBO:0055086"}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_01579","SJAG_01601","SJAG_04186","SJAG_02778","SJAG_03356","SJAG_00302","SJAG_03916","SJAG_03844","SJAG_03418","SJAG_03982","SJAG_03685","SJAG_03664","SJAG_03543","SJAG_03042","SJAG_00335","SJAG_00678","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87082,87419,88217,89972,95248,95683,98130,98131,98132,100218,100315,106617,108232,108336,108730,108731,108732,109418,112054,113833],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: PBO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 17","termid":"PBO:0050945"}


id: PBO:0047670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin","termid":"PBO:0047670"}


id: GO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast development","termid":"GO:0048884"}


id: PBO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L1","termid":"PBO:0090062"}


id: PBO:0040970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 41","termid":"PBO:0040970"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: GO:0018310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via S-(6-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0220"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via S-(6-FMN)-L-cysteine (obsolete GO:0018310)","termid":"GO:0018310"}


id: MOD:00064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.","definition_xrefs":["PubMed:11857757","OMSSA:24","PubMed:15350136","PubMed:11999733","PubMed:12175151","PubMed:1680872","PubMed:670159","PubMed:11369851","RESID:AA0055","Unimod:1#K","ChEBI:17752","DeltaMass:214","PubMed:14730666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated L-lysine","termid":"MOD:00723"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-acetyl-L-lysine","synonyms":[{"name":"(2S)-6-acetamido-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylamino-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylazanyl-2-aminohexanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N6-acetyllysine","type":"exact"},{"name":"N(zeta)-acetyllysine","type":"exact"},{"name":"N6-acetyl-L-lysine","type":"exact"},{"name":"N6-acetylated L-lysine","type":"exact"},{"name":"N6AcLys","type":"exact"},{"name":"acetylk","type":"exact"},{"name":"epsilon-acetyllysine","type":"exact"}],"termid":"MOD:00064"}


id: GO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"}


id: GO:0009421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous structure at the distal tip of the bacterial-type flagellar filament.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum filament","termid":"GO:0009420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament cap","synonyms":[{"name":"flagellar filament cap","type":"exact"},{"name":"flagellin-based flagellum filament cap","type":"exact"}],"termid":"GO:0009421"}


id: SO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_7_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_7_trimethylguanosine","secondary_identifiers":["RNAMOD:091"],"synonyms":[{"name":"N2,N2,7-trimethylguanosine","type":"exact"},{"name":"m2,2,7G","type":"exact"}],"termid":"SO:0001339"}


id: GO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:ai","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red or far red light","termid":"GO:0009639"}


id: PBO:0086611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; contains two adjacent PH-like domains; conserved in closely related Saccharomyces species","termid":"PBO:0086611"}


id: PBO:0028687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028687"}


id: FYPO:0001991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that dies without completing cell division.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division","synonyms":[{"name":"inviable after spore germination, no cell division","type":"exact"},{"name":"inviable following spore germination, without cell division","type":"exact"},{"name":"inviable germinated spore, without cell division","type":"exact"},{"name":"lethal after spore germination, without cell division","type":"exact"}],"termid":"FYPO:0001991"}


id: MOD:01831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfone","synonyms":[{"name":"CamCO2","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfone","type":"exact"}],"termid":"MOD:01831"}


id: GO:0071359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dsRNA","termid":"GO:0043331"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsRNA","synonyms":[{"name":"cellular response to double-stranded RNA","type":"exact"}],"termid":"GO:0071359"}


id: PBO:0072787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 2, pseudogene","termid":"PBO:0072787"}


id: PBO:0076379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1/MAP3K7 binding protein 3 pseudogene 1","termid":"PBO:0076379"}


id: PBO:0075584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 8 (putative)","termid":"PBO:0075584"}


id: PATO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000876 respiratory rate value (obsolete PATO:0000876)","termid":"PATO:0000876"}


id: GO:0140352
data:
  {"annotated_genes":["SJAG_01563","SJAG_00355","SJAG_02368","SJAG_02320","SJAG_07004","SJAG_02012","SJAG_02572","SJAG_00430","SJAG_02529","SJAG_01722","SJAG_00826","SJAG_02602","SJAG_01129","SJAG_01541","SJAG_01772","SJAG_03499","SJAG_01973","SJAG_02587","SJAG_02166","SJAG_04966","SJAG_02518","SJAG_03864","SJAG_03938","SJAG_03357","SJAG_01697","SJAG_02366","SJAG_01183","SJAG_01048","SJAG_00280","SJAG_01925","SJAG_01145","SJAG_04960","SJAG_04258","SJAG_01669","SJAG_03363","SJAG_00661","SJAG_04167","SJAG_03005","SJAG_00332","SJAG_01448","SJAG_03951","SJAG_03246","SJAG_03754","SJAG_02004","SJAG_02753","SJAG_01324","SJAG_03536","SJAG_03718","SJAG_03763","SJAG_04044","SJAG_04517","SJAG_04509","SJAG_04058","SJAG_04343","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[84591,86911,96970,112336,109036,114901,103516,110061,90006,88162,90380,91129,91167,93592,84945,88416,104335,111751,113229,114607,98788,113633,87298,101188,98046,87438,87622,84188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[109871,96944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[103315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"},{"annotations":[96298],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[108472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[109901,83895,83894,92878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120029"},{"annotations":[89990,94540,84099],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[92880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[114904,85892,114280,86743,88477,96377,114505,113598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[114905,109995,113809,86913,98048,110278,84816,95673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[92631,113125,114029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of some substance from a cell, into the extracellular region. This may occur via transport across the plasma membrane or via exocytosis.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01129":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01324":null,"SJAG_01448":null,"SJAG_01541":null,"SJAG_01563":null,"SJAG_01669":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_01973":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02529":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02602":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03363":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_03951":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"export from cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux","type":"broad"}],"termid":"GO:0140352","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0036376":null,"GO:0045921":null,"GO:0090522":null,"GO:0090539":null,"GO:0097623":null,"GO:0120029":null,"GO:0140116":null,"GO:0140159":null,"GO:1990961":null}}


id: PBO:0048539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEN1 Holliday junction 5' flap endonuclease","termid":"PBO:0048539"}


id: PBO:0065150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 2","termid":"PBO:0065150"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98454],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["PMID:15068790","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: PBO:0027161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_meiotic_spindle_pole_body_during_meiosis_I","termid":"PBO:0027161"}


id: PBO:0031251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress","termid":"PBO:0031251"}


id: PBO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Lcp5 (predicted)","termid":"PBO:0000273"}


id: GO:0075019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of appressorium formation","termid":"GO:0075017"},{"relation_name":"negatively_regulates","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of appressorium formation","synonyms":[{"name":"negative regulation of appressorium formation on or near host","type":"related"}],"termid":"GO:0075019"}


id: GO:0140201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urea from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transport","termid":"GO:0071918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"urea import across plasma membrane","termid":"GO:0140201"}


id: GO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A parental behavior in which fertilized eggs are taken into the mouth and held until hatching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral incubation","termid":"GO:0060747"}


id: GO:1900969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pteridine metabolic process","termid":"GO:0045863"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"negatively_regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sarcinapterin metabolic process","synonyms":[{"name":"down regulation of sarcinapterin metabolic process","type":"exact"},{"name":"down regulation of sarcinapterin metabolism","type":"exact"},{"name":"down-regulation of sarcinapterin metabolic process","type":"exact"},{"name":"down-regulation of sarcinapterin metabolism","type":"exact"},{"name":"downregulation of sarcinapterin metabolic process","type":"exact"},{"name":"downregulation of sarcinapterin metabolism","type":"exact"},{"name":"inhibition of sarcinapterin metabolic process","type":"narrow"},{"name":"inhibition of sarcinapterin metabolism","type":"exact"},{"name":"negative regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900969"}


id: PBO:0090927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef2","termid":"PBO:0090927"}


id: FYPO:0000851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to osmotic stress","synonyms":[{"name":"increased growth during cellular response to osmotic stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"resistance to osmotic stress during mitotic cell cycle","type":"related"},{"name":"resistance to osmotic stress during vegetative growth","type":"exact"},{"name":"resistant to osmotic stress","type":"exact"}],"termid":"FYPO:0000851"}


id: GO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}


id: PBO:0016050
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Tsm One","termid":"PBO:0016050"}


id: GO:0002933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a hydroxyl group to one or more fatty acids in a lipid.","definition_xrefs":["PMID:15658937","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid hydroxylation","synonyms":[{"name":"fatty acid hydroxylation","type":"related"}],"termid":"GO:0002933"}


id: PR:Q9P7G6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tos4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7G6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor P14E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.02","synonyms":[{"name":"Spom972h-tos4","type":"exact"}],"termid":"PR:Q9P7G6"}


id: PBO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs2 (predicted)","termid":"PBO:0017496"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: GO:0033283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an organic acid from one side of a membrane to the other according to the reaction: ATP + H2O + organic acid(out/in) = ADP + phosphate + organic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transmembrane transporter activity","termid":"GO:0005342"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled organic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent organic acid transmembrane transporter activity","type":"exact"},{"name":"organic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033283"}


id: PBO:0059020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 9","termid":"PBO:0059020"}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: GO:0047415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-benzoyl-D-arginine-4-nitroanilide + H2O = 4-nitroaniline + N(2)-benzoyl-D-arginine + H+.","definition_xrefs":["RHEA:14421","EC:3.5.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"D-benzoylarginine-4-nitroanilide amidase activity","secondary_identifiers":["MetaCyc:3.5.1.72-RXN","KEGG_REACTION:R04113"],"synonyms":[{"name":"D-BAPA-ase activity","type":"related"},{"name":"N-benzoyl-D-arginine-4-nitroanilide amidohydrolase activity","type":"related"},{"name":"benzoyl-D-arginine arylamidase activity","type":"related"}],"termid":"GO:0047415"}


id: PBO:0089233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Heh1/Lem2","termid":"PBO:0089233"}


id: GO:0000430
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71001,102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"Any process involving glucose that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"regulation of transcription by glucose","termid":"GO:0046015"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of transcription from RNA polymerase II promoter by glucose","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000430","terms_by_termid":{"GO:0000433":null}}


id: PBO:0074079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 3","termid":"PBO:0074079"}


id: PBO:0083780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for pre-18S rRNA processing; interacts with Dim1p, an 18S rRNA dimethyltransferase, and also with Nob1p, which is involved in proteasome biogenesis; contains a KH domain","termid":"PBO:0083780"}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: PBO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0015264"}


id: PBO:0074373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 nonsense mediated mRNA decay associated PI3K related kinase","termid":"PBO:0074373"}


id: GO:0018024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.","definition_xrefs":["RHEA:10024"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine N-methyltransferase activity (obsolete GO:0018024)","synonyms":[{"name":"S-adenosyl-L-methionine:histone-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:histone-L-lysine N6-methyltransferase activity","type":"related"},{"name":"histone H1-specific S-adenosylmethionine:protein-lysine N-methyltransferase activity","type":"narrow"},{"name":"histone-lysine N-methylase activity","type":"exact"},{"name":"histone-lysine N-methyltransferase activity","type":"exact"}],"termid":"GO:0018024"}


id: PBO:0052505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 18","termid":"PBO:0052505"}


id: GO:0032788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving saturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and fully saturated C-C bonds.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"saturated monocarboxylic acid metabolic process","synonyms":[{"name":"saturated monocarboxylate metabolic process","type":"exact"},{"name":"saturated monocarboxylic acid metabolism","type":"exact"}],"termid":"GO:0032788"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: PBO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member B","termid":"PBO:0047047"}


id: FYPO:0004411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing oxaliplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on oxaliplatin","synonyms":[{"name":"normal cell population growth in presence of oxaliplatin","type":"exact"},{"name":"normal cell population growth on oxaliplatin","type":"exact"},{"name":"normal cellular response to oxaliplatin","type":"related"},{"name":"normal vegetative cell population growth on oxaliplatin","type":"exact"}],"termid":"FYPO:0004411"}


id: PBO:0083607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential HSF1 gene encoding heat shock transcription factor","termid":"PBO:0083607"}


id: PR:O13600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sws1 gene.","definition_xrefs":["UniProtKB:O13600","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM domain-containing protein sws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.06","synonyms":[{"name":"SWIM domain-containing and srs2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sws1","type":"exact"}],"termid":"PR:O13600"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: PBO:0064151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 3","termid":"PBO:0064151"}


id: PBO:0027395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027395"}


id: PBO:0056707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MELTF antisense RNA 1","termid":"PBO:0056707"}


id: GO:1902676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right ventral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:5961344","GO_REF:0000064","GOC:TermGenie","GOC:giardia","ISBN:9780124260207","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right ventral flagellum","termid":"GO:0097559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right ventral basal body","synonyms":[{"name":"cilial basal body of right ventral cilium","type":"exact"},{"name":"cilial basal body of right ventral flagellum","type":"exact"},{"name":"ciliary basal body of right ventral cilium","type":"exact"},{"name":"ciliary basal body of right ventral flagellum","type":"exact"},{"name":"cilium basal body of right ventral cilium","type":"exact"},{"name":"cilium basal body of right ventral flagellum","type":"exact"},{"name":"microtubule basal body of right ventral cilium","type":"exact"},{"name":"microtubule basal body of right ventral flagellum","type":"exact"},{"name":"right ventral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902676"}


id: PBO:0048998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 6","termid":"PBO:0048998"}


id: PBO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.-","termid":"PBO:0002873"}


id: PBO:0057808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-1","termid":"PBO:0057808"}


id: PATO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000009 absolute speed (obsolete PATO:0000009)","termid":"PATO:0000009"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: PBO:0091166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor, LYR family Sdh6","termid":"PBO:0091166"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: PBO:0028368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_microsatellite_DNA_binding","termid":"PBO:0028368"}


id: PBO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q13.2)","termid":"PBO:0047937"}


id: PBO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2439","termid":"PBO:0055024"}


id: GO:0070478
data:
  {"annotated_genes":["SJAG_04118","SJAG_04824","SJAG_05014","SJAG_03886","SJAG_00226","SJAG_03179","SJAG_04006","SJAG_04056","SJAG_04084","SJAG_01818","SJAG_04321","SJAG_04153","SJAG_01218","SJAG_04818","SJAG_01521","SJAG_00854","SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84938,85970,87664,89210,92057,93392,97361,98210,100524,101380,102588,103588,104957,112000,112266,113320,114367],"is_not":false,"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["PMID:12769863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-5' NMD","type":"exact"},{"name":"3'-5' nonsense-mediated decay","type":"exact"},{"name":"3'-5' nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"}],"termid":"GO:0070478","terms_by_termid":{"GO:0070478":null}}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: PBO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q11.2)","termid":"PBO:0047922"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: GO:1903008
data:
  {"annotated_genes":["SJAG_03345","SJAG_00898","SJAG_04232","SJAG_03232","SJAG_05261","SJAG_04635","SJAG_03100","SJAG_00059","SJAG_01876","SJAG_03435","SJAG_01251","SJAG_00115","SJAG_04963","SJAG_02539","SJAG_04219","SJAG_01274","SJAG_04991","SJAG_01135","SJAG_02096","SJAG_01497","SJAG_04655","SJAG_04502","SJAG_06309","SJAG_00645","SJAG_01283","SJAG_04283","SJAG_01561","SJAG_04759","SJAG_04862","SJAG_01783","SJAG_04435","SJAG_01382","SJAG_00053","SJAG_03851","SJAG_05000","SJAG_02414","SJAG_01074","SJAG_03189","SJAG_05289","SJAG_03170","SJAG_00188","SJAG_05017","SJAG_02746","SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107817,94739,93742,99719,86253,104780,105906,91583,109777,96404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[110529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[90766,85226,88769,91104,95821,100951,106798,96100,113897,84034,111337,87761,89047,94014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[67984],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[85688],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[99259,102996,88013,110126,95573,84117,112205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[95824,95526,99722,86579,100954,104697,104787,106799,111338,112711,113900,100501,96102,71660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[112147,107649,101713,100830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"}]},"cv_name":"biological_process","definition":"The disaggregation of an organelle into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00059":null,"SJAG_00115":null,"SJAG_00188":null,"SJAG_00645":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01497":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02096":null,"SJAG_02414":null,"SJAG_02539":null,"SJAG_02699":null,"SJAG_02746":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03345":null,"SJAG_03435":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04635":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04862":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle disassembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"organelle degradation","type":"exact"}],"termid":"GO:1903008","terms_by_termid":{"GO:0000422":null,"GO:0000423":null,"GO:0032790":null,"GO:0051228":null,"GO:0061709":null,"GO:0072344":null,"GO:0140501":null,"GO:0140708":null,"GO:1903599":null}}


id: PBO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYBPC2 cis regulating lncRNA enhancer of myogenesis","termid":"PBO:0060377"}


id: FYECO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to ionizing radiation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ionizing radiation","synonyms":[{"name":"gamma irradiation","type":"narrow"},{"name":"gamma radiation","type":"narrow"}],"termid":"FYECO:0000305"}


id: PBO:0089725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 Cyt1","termid":"PBO:0089725"}


id: PBO:0016531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase Erg7","termid":"PBO:0016531"}


id: PBO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 3","termid":"PBO:0072317"}


id: _global:depends_on
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depends_on","secondary_identifiers":["RO:0002502"],"termid":"_global:depends_on"}


id: GO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell as part of an inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion","termid":"GO:0001820"},{"relation_name":"part_of","term_name":"serotonin production involved in inflammatory response","termid":"GO:0002351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion involved in inflammatory response","synonyms":[{"name":"serotonin release involved in inflammatory response","type":"related"},{"name":"serotonin secretion involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002442"}


id: FYPO:0005628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of cell separation after cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of cell separation after cytokinesis","synonyms":[{"name":"decreased rate of cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinetic cell separation","type":"exact"},{"name":"decreased rate of septum digestion after cytokinesis","type":"exact"},{"name":"reduced rate of cell separation after cytokinesis","type":"exact"}],"termid":"FYPO:0005628"}


id: PBO:0058342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4715","termid":"PBO:0058342"}


id: GO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureteric bud, that contributes to ureteric bud development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureteric bud development","synonyms":[{"name":"ureteric bud mesenchymal cell proliferation","type":"broad"}],"termid":"GO:0072138"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: MOD:01398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-propanoyl-L-lysine.","definition_xrefs":["Unimod:58#K","PubMed:17684016","PubMed:20715035","RESID:AA0475","PubMed:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"propanoylated residue","termid":"MOD:01894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-propanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(propanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-propionylaminocaproic acid","type":"exact"},{"name":"MOD_RES N6-propionyllysine","type":"exact"},{"name":"N(zeta)-propanoyllysine","type":"exact"},{"name":"N6-(1-oxopropyl)-L-lysine","type":"exact"},{"name":"N6-propanoyl-L-lysine","type":"exact"},{"name":"N6-propionyllysine","type":"exact"},{"name":"epsilon-propanoyl-L-lysine","type":"exact"},{"name":"epsilon-propionyl-L-lysine","type":"exact"}],"termid":"MOD:01398"}


id: PBO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-25-1 (pseudogene)","termid":"PBO:0051482"}


id: GO:1903779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rph","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:12967627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac conduction","termid":"GO:1903779"}


id: GO:0150018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a basal dendrite over time, from its formation to the mature structure.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite development","termid":"GO:0150018"}


id: PBO:0089152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim14","termid":"PBO:0089152"}


id: PBO:0111875
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0111875"}


id: PR:Q9HDY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.08 gene.","definition_xrefs":["UniProtKB:Q9HDY2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein PB1A10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.08","synonyms":[{"name":"Spom972h-SPAPB1A10.08","type":"exact"}],"termid":"PR:Q9HDY2"}


id: GO:0006554
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lysine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lysine breakdown","type":"exact"},{"name":"lysine catabolism","type":"exact"},{"name":"lysine degradation","type":"exact"}],"termid":"GO:0006554","terms_by_termid":{"GO:0033512":null}}


id: PBO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A5","termid":"PBO:0043779"}


id: GO:0009309
data:
  {"annotated_genes":["SJAG_01346","SJAG_01455","SJAG_00043","SJAG_03167","SJAG_05007","SJAG_04481","SJAG_02505","SJAG_03632","SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[107302],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[109502,98882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[109503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"},{"annotations":[87718,93182,100509,99629,110773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine anabolism","type":"exact"},{"name":"amine biosynthesis","type":"exact"},{"name":"amine formation","type":"exact"},{"name":"amine synthesis","type":"exact"}],"termid":"GO:0009309","terms_by_termid":{"GO:0000162":null,"GO:0006597":null,"GO:0008295":null,"GO:0010967":null,"GO:0033387":null}}


id: PBO:0041637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 D","termid":"PBO:0041637"}


id: PBO:0057308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-1","termid":"PBO:0057308"}


id: PR:Q7LKY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1289.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKY2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin-related protein C1289.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.14","synonyms":[{"name":"Spom972h-SPBC1289.14","type":"exact"}],"termid":"PR:Q7LKY2"}


id: PBO:0053718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 928","termid":"PBO:0053718"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PMID:25664722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: GO:0004571
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66043,91855],"is_not":false,"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["PMID:25092655","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9036008","Reactome:R-HSA-9036011","Reactome:R-HSA-4793949","Reactome:R-HSA-964830","Reactome:R-HSA-901024","EC:3.2.1.113","MetaCyc:RXN-18911","Reactome:R-HSA-9036012","Reactome:R-HSA-964825","Reactome:R-HSA-9696807","MetaCyc:RXN-18910","Reactome:R-HSA-6782685","Reactome:R-HSA-901039","Reactome:R-HSA-901074","Reactome:R-HSA-964737","KEGG_REACTION:R05982","Reactome:R-HSA-901036","KEGG_REACTION:R06722"],"synonyms":[{"name":"1,2-alpha-mannosidase","type":"related"},{"name":"1,2-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"Man9-mannosidase activity","type":"narrow"},{"name":"ManI activity","type":"narrow"},{"name":"exo-alpha-1,2-mannanase activity","type":"related"},{"name":"glycoprotein processing mannosidase I","type":"related"},{"name":"mannose-9 processing alpha-mannosidase activity","type":"narrow"},{"name":"mannosidase 1A activity","type":"narrow"},{"name":"mannosidase 1B activity","type":"narrow"},{"name":"mannosidase I","type":"related"}],"termid":"GO:0004571","terms_by_termid":{"GO:0004571":null}}


id: PBO:0085231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication","termid":"PBO:0085231"}


id: PBO:0079438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 6","termid":"PBO:0079438"}


id: PBO:0088045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p; functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity","termid":"PBO:0088045"}


id: PBO:0091065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom5","termid":"PBO:0091065"}


id: PBO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previusly annotated as SPBTRNAASP.03","termid":"PBO:0008726"}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: PR:O74370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf12 gene.","definition_xrefs":["UniProtKB:O74370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.05c","synonyms":[{"name":"Spom972h-cwf12","type":"exact"},{"name":"complexed with cdc5 protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74370"}


id: PR:O60159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H(+)/Cl(-) exchange transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anion/proton exchange transporter C19C7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.11","secondary_identifiers":["UniProtKB:O60159"],"synonyms":[{"name":"Spom972h-CLCN3","type":"exact"}],"termid":"PR:O60159"}


id: GO:1905948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + 3',5'-cyclic GMP(in) = ADP + phosphate + 3',5'-cyclic GMP(out).","definition_xrefs":["GO_REF:0000070","GOC:TermGenie","PMID:18310115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type 3',5'-cyclic GMP transmembrane transporter activity","secondary_identifiers":["RHEA:66188"],"synonyms":[{"name":"3',5'-cyclic GMP transmembrane-transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 3',5'-cyclic GMP transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled 3',5'-cyclic GMP transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cGMP transmembrane transporter activity","type":"exact"}],"termid":"GO:1905948"}


id: PBO:0055458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2890","termid":"PBO:0055458"}


id: PBO:0066787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 86","termid":"PBO:0066787"}


id: GO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The location where a secondary projection arises from a neuron projection.","definition_xrefs":["PMID:25586189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection branch point","termid":"GO:0061845"}


id: PBO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 2","termid":"PBO:0043309"}


id: GO:1903167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyrroline-5-carboxylate reductase activity","synonyms":[{"name":"regulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"regulation of L-proline oxidase activity","type":"exact"},{"name":"regulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"regulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"regulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"regulation of P5CR activity","type":"exact"}],"termid":"GO:1903167"}


id: GO:1905957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to alcohol","termid":"GO:1905957"}


id: PBO:0035866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0035866"}


id: GO:2000634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA processing","termid":"GO:1903798"},{"relation_name":"regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of primary miRNA processing","synonyms":[{"name":"regulation of pri-miRNA processing","type":"exact"},{"name":"regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000634"}


id: GO:0150020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"basal dendrite morphogenesis","termid":"GO:0150019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite arborization","termid":"GO:0150020"}


id: PBO:0048432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 3 (gene/pseudogene)","termid":"PBO:0048432"}


id: GO:0099025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic membrane (obsolete GO:0099025)","termid":"GO:0099025"}


id: GO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation in a cell that has been targeted by a virus of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"part_of","term_name":"induction by virus of host cell-cell fusion","termid":"GO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of syncytium formation via plasma membrane fusion","termid":"GO:0060140"}


id: GO:1905381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:TermGenie","PMID:10022900","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"negatively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"negative regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"down regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"down regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"down-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"downregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"inhibition of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"inhibition of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905381"}


id: GO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.133-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan alpha-maltohydrolase activity","type":"exact"},{"name":"glucan-1,4-alpha-maltohydrolase activity","type":"exact"},{"name":"maltogenic alpha-amylase activity","type":"exact"}],"termid":"GO:0043897"}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A19","termid":"PBO:0047016"}


id: PBO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene (predicted)","termid":"PBO:0004983"}


id: GO:0071617
data:
  {"annotated_genes":["SJAG_04323","SJAG_01957","SJAG_04792","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100106,86208,87329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[95868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042171"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of acyl groups from an acyl-CoA to a lysophospholipid.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04323":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"lysophospholipid acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071617","terms_by_termid":{"GO:0003841":null,"GO:0042171":null}}


id: PBO:0052902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-13, pseudogene","termid":"PBO:0052902"}


id: GO:0160048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of fusing together the edges of a craniofacial suture.","definition_xrefs":["PMID:33842480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"craniofacial suture closure","termid":"GO:0160048"}


id: GO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoylputrescine + H2O + 2 H+ = CO2 + NH4 + putrescine.","definition_xrefs":["RHEA:22284","EC:3.5.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N-carbamoylputrescine amidase activity","secondary_identifiers":["MetaCyc:N-CARBAMOYLPUTRESCINE-AMIDASE-RXN","KEGG_REACTION:R01152"],"synonyms":[{"name":"N-carbamoylputrescine amidohydrolase activity","type":"related"},{"name":"NCP","type":"related"},{"name":"carbamoylputrescine hydrolase activity","type":"related"}],"termid":"GO:0050126"}


id: GO:0140933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N7-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + H2O = a 5'-end phospho-ribonucleoside in mRNA + N7-methyl-GDP + H+.","definition_xrefs":["PMID:18820299","PMID:29483298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity","secondary_identifiers":["EC:3.6.1.62","RHEA:67484"],"synonyms":[{"name":"m(7)GpppN-mRNA hydrolase activity","type":"exact"}],"termid":"GO:0140933"}


id: PATO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to being water-repellent; tending to repel and not absorb water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophobicity","termid":"PATO:0001884"}


id: PBO:0070908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 16","termid":"PBO:0070908"}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: GO:0032834
data:
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id: GO:0098598
data:
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id: CHEBI:15422
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP","termid":"CHEBI:15422"}


id: PBO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPT1 pseudogene 1","termid":"PBO:0052028"}


id: GO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cell separation after cytokinesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter (obsolete GO:0100027)","termid":"GO:0100027"}


id: GO:0072708
data:
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id: GO:0009205
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id: PATO:0001105
data:
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id: FYPO:0002683
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id: GO:0009068
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id: FYPO:0005225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3K4me2 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005225"}


id: PBO:0064305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholamban","termid":"PBO:0064305"}


id: PBO:0049214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate receptor interacting protein 1","termid":"PBO:0049214"}


id: PBO:0087796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL); required for maintenance of NHEJ inhibition at telomeres; functions at telomeres to translocate and ubiquitinylate poly-sumoylated Rap1p for proteosomal degradation; plays role in antagonizing silencing during mating-type switching; only known STUbL with a translocase activity; contains RING finger domain; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087796"}


id: PR:000050514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the alp7 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule protein alp7 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"SPAC890.02c","type":"related"},{"name":"Spom-alp7","type":"exact"},{"name":"TACC protein mia1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"alp7","type":"related"},{"name":"altered polarity protein 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"mia1","type":"related"},{"name":"transforming acidic coiled-coil protein mia1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050514"}


id: PBO:0036235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex poly(A) polymerase subunit Cid14","termid":"PBO:0036235"}


id: PBO:0052103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 6","termid":"PBO:0052103"}


id: PBO:0048530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 6","termid":"PBO:0048530"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: PR:P32372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-M checkpoint control protein rad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.18c","synonyms":[{"name":"P74 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad4","type":"exact"},{"name":"protein cut5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32372"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: PBO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst1","termid":"PBO:0005608"}


id: PBO:0073646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigma non-opioid intracellular receptor 1","termid":"PBO:0073646"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: GO:1905465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"G-quadruplex DNA unwinding","termid":"GO:0044806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of G-quadruplex DNA unwinding","termid":"GO:1905465"}


id: PBO:0086747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted member of the oligopeptide transporter (OPT) family of membrane transporters","termid":"PBO:0086747"}


id: FYPO:0002133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002131","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-RNA interaction","synonyms":[{"name":"RNA binding abolished","type":"exact"},{"name":"abolished RNA binding","type":"exact"},{"name":"abolished RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002133"}


id: PR:Q9UT91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP protein subunit rmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.08","synonyms":[{"name":"RNA-processing protein rmp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rmp1","type":"exact"}],"termid":"PR:Q9UT91"}


id: PBO:0085204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer membrane component of the mitochondrial fusion machinery; binds to Fzo1p and Mgm1p to link these two GTPases during mitochondrial fusion; involved in fusion of both the outer and inner membranes; facilitates dimerization of Fzo1p during fusion; import into the outer membrane is mediated by Tom70p and Mim1p; has similarity to carrier proteins but likely not a transporter; similar to human SLC25A46 implicated in optic atroprophy spectrum disorder and Leigh syndrome","termid":"PBO:0085204"}


id: PBO:0056752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 3","termid":"PBO:0056752"}


id: PBO:0087061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2B; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2B has a paralog, RPL2A, that arose from the whole genome duplication; expression is upregulated at low temperatures","termid":"PBO:0087061"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: GO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells degrade mitochondria by inducing a vacuole-like structure which directly engulfs and degrades the unhealthy mitochondria by accumulating lysosomes.","definition_xrefs":["GOC:bf","GOC:sp","GOC:autophagy","PMID:21264228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"mitophagy by internal vacuole formation","synonyms":[{"name":"MIV-mediated mitophagy","type":"narrow"}],"termid":"GO:0035695"}


id: PBO:0041552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 18","termid":"PBO:0041552"}


id: GO:1903884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GOC:TermGenie","PMID:20054338","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"regulation of CCL-20 production","type":"exact"},{"name":"regulation of CCL20 production","type":"exact"}],"termid":"GO:1903884"}


id: PBO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ5","termid":"PBO:0036506"}


id: PBO:0081013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 1","termid":"PBO:0081013"}


id: GO:0043097
data:
  {"annotated_genes":["SJAG_04264","SJAG_05029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93877,109947],"is_not":false,"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process that generates a pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose, from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043097","terms_by_termid":{"GO:0043097":null}}


id: PBO:0074476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1","termid":"PBO:0074476"}


id: GO:0000492
data:
  {"annotated_genes":["SJAG_05679","SJAG_05223","SJAG_01567","SJAG_03036","SJAG_04355","SJAG_00752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93624,94084,97817,100181,108368,113751],"is_not":false,"summary":null,"term":"GO:0000492"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_01567":null,"SJAG_03036":null,"SJAG_04355":null,"SJAG_05223":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"box C/D snoRNP assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000492","terms_by_termid":{"GO:0000492":null}}


id: PBO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 4 pseudogene 1","termid":"PBO:0047413"}


id: GO:0032945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"negatively_regulates","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mononuclear cell proliferation","synonyms":[{"name":"negative regulation of PBMC proliferation","type":"narrow"},{"name":"negative regulation of peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032945"}


id: GO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the second alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","PMID:12829701","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of second mannose on A branch","synonyms":[{"name":"conversion of (Man)8A(GlcNAc)2 to (Man)7AA(GlcNAc)2","type":"related"},{"name":"conversion of M8A to M7AA","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036512"}


id: GO:0050821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein stabilization","synonyms":[{"name":"lysosomal protein stabilization","type":"narrow"},{"name":"positive regulation of protein stability","type":"exact"},{"name":"protein sequestering","type":"related"},{"name":"protein stabilisation","type":"exact"},{"name":"protein stabilization activity","type":"related"}],"termid":"GO:0050821"}


id: PBO:0052683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 51","termid":"PBO:0052683"}


id: PBO:0074624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22","termid":"PBO:0074624"}


id: SO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region composed of the TSS(s) and binding sites for TF_complexes of the core transcription machinery. A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter","secondary_identifiers":["http://en.wikipedia.org/wiki/Promoter"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:promoter","type":"exact"},{"name":"promoter sequence","type":"exact"}],"termid":"SO:0000167"}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_05304","SJAG_03345","SJAG_04151","SJAG_00718","SJAG_04573","SJAG_03501","SJAG_02682","SJAG_03568","SJAG_02703","SJAG_01585","SJAG_01253","SJAG_03302","SJAG_01657","SJAG_04018","SJAG_00293","SJAG_01307","SJAG_01150","SJAG_05286","SJAG_00642","SJAG_04384","SJAG_01632","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85168,85441,85822,88780,90028,93965,98239,100101,101959,105988,108689,108942,112510,113094,114297,114512],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[87388,107839,102014],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[89824,113092,109566,89825,109565,109564,89826],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["PMID:22017871","PMID:12923525","GOC:mah","GOC:bf","GOC:signaling","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030967","GO:0035104","GO:0006994"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: GO:0006145
data:
  {"annotated_genes":["SJAG_01997","SJAG_05287","SJAG_04299","SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87918,110189],"is_not":false,"summary":null,"term":"GO:0006145"},{"annotations":[111143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[113450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine base breakdown","type":"exact"},{"name":"purine base catabolic process","type":"exact"},{"name":"purine base catabolism","type":"exact"},{"name":"purine base degradation","type":"exact"}],"termid":"GO:0006145","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: PBO:0043689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1 pseudogene 2","termid":"PBO:0043689"}


id: SO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Gypsy superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH, INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gypsy_LTR_retrotransposon","synonyms":[{"name":"Gypsy LTR retrotransposon","type":"exact"},{"name":"RLG retrotransposon","type":"exact"},{"name":"Ty3 retrotransposon","type":"exact"}],"termid":"SO:0002265"}


id: PBO:0076678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 3","termid":"PBO:0076678"}


id: GO:0018898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:dcb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorobenzoate metabolic process","synonyms":[{"name":"2,4-dichlorobenzoate metabolism","type":"exact"}],"termid":"GO:0018898"}


id: PBO:0061505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: PBO:0065075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 divergent transcript","termid":"PBO:0065075"}


id: FYPO:0000533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"decreased mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000532"},{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"normal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"normal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000533"}


id: PR:Q9Y7S1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein C569.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.02c","synonyms":[{"name":"Spom972h-SPCC569.02c","type":"exact"}],"termid":"PR:Q9Y7S1"}


id: GO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"negatively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ethylene biosynthetic process","termid":"GO:0010366"}


id: GO:1904294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"regulation of ERAD pathway","termid":"GO:1904292"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of ERAD pathway","synonyms":[{"name":"activation of ER-associated degradation pathway","type":"related"},{"name":"activation of ERAD pathway","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated degradation","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"positive regulation of ER-associated degradation pathway","type":"related"},{"name":"positive regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"positive regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up regulation of ER-associated degradation pathway","type":"related"},{"name":"up regulation of ERAD pathway","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up-regulation of ER-associated degradation pathway","type":"related"},{"name":"up-regulation of ERAD pathway","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"upregulation of ER-associated degradation pathway","type":"related"},{"name":"upregulation of ERAD pathway","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904294"}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_02626","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113871,114219],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:vw","PMID:21900489","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: PATO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000782 defensive function value (obsolete PATO:0000782)","termid":"PATO:0000782"}


id: GO:0052141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near host (obsolete GO:0052141)","termid":"GO:0052141"}


id: PBO:0017582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fission yeast Syntaxin homolog required for Vacuolar protein transport","termid":"PBO:0017582"}


id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: GO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"}


id: PBO:0089061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein, possibly be part of SJAG_01450","termid":"PBO:0089061"}


id: PBO:0084941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of HER2 involved in mitochondrial translation; mutant is defective in directing meiotic recombination events to homologous chromatids","termid":"PBO:0084941"}


id: GO:1901521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspyridone B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"aspyridone B metabolic process","termid":"GO:1901519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"aspyridone B biosynthetic process","synonyms":[{"name":"aspyridone B anabolism","type":"exact"},{"name":"aspyridone B biosynthesis","type":"exact"},{"name":"aspyridone B formation","type":"exact"},{"name":"aspyridone B synthesis","type":"exact"}],"termid":"GO:1901521"}


id: PATO:0010001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected","termid":"PATO:0010001"}


id: PR:O14330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.15","synonyms":[{"name":"Spom972h-SPBC16E9.15","type":"exact"}],"termid":"PR:O14330"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: GO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of compounds containing arsenic, including arsenates, arsenites, and arsenides. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of arsenic or arsenic-containing compounds.","definition_xrefs":["GOC:kmv","PMID:20221439","PMID:11313333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to arsenic-containing substance","termid":"GO:0046685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of arsenic-containing substance","synonyms":[{"name":"detoxification of arsenic","type":"exact"}],"termid":"GO:0071722"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: PBO:0078852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 6","termid":"PBO:0078852"}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: FYPO:0004792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced telomere-nuclear envelope distance during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004792"}


id: PR:P87117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A beclin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein atg6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.10c","secondary_identifiers":["UniProtKB:P87117"],"synonyms":[{"name":"Spom972h-BECN1","type":"exact"},{"name":"autophagy-related protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87117"}


id: GO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain","termid":"GO:0021534"}


id: PBO:0076480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane anterior posterior transformation 1","termid":"PBO:0076480"}


id: PBO:0043072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 1 subunit","termid":"PBO:0043072"}


id: GO:1990850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane glycoprotein complex with aspartyl proteinase and metalloproteinase activity which is expressed in the gut. An example of this is found in the nematode Haemonchus contortus.","definition_xrefs":["PMID:11166393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"H-gal-GP complex","synonyms":[{"name":"Haemonchus galactose-containing glycoprotein complex","type":"exact"},{"name":"galactose-containing glycoprotein complex","type":"narrow"}],"termid":"GO:1990850"}


id: PBO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28 (predicted)","termid":"PBO:0002460"}


id: GO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + (5Z,13E)-(15S)-9-alpha,11-alpha,15-trihydroxyprosta-5,13-dienoate = NADPH + H+ + (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate.","definition_xrefs":["MetaCyc:1.1.1.188-RXN","EC:1.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"prostaglandin-F synthase activity","secondary_identifiers":["RHEA:10140"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 11-oxidoreductase activity","type":"related"},{"name":"NADPH-dependent prostaglandin D2 11-keto reductase activity","type":"related"},{"name":"PGD(2) 11-ketoreductase activity","type":"related"},{"name":"PGD2 11-ketoreductase activity","type":"related"},{"name":"PGF synthetase activity","type":"related"},{"name":"PGF2alpha synthetase activity","type":"related"},{"name":"prostaglandin 11-keto reductase activity","type":"related"},{"name":"prostaglandin 11-ketoreductase activity","type":"related"},{"name":"prostaglandin D2-ketoreductase activity","type":"related"},{"name":"prostaglandin F synthase activity","type":"related"},{"name":"prostaglandin F synthetase activity","type":"related"},{"name":"prostaglandin-D(2) 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D(2) 11-reductase activity","type":"related"},{"name":"prostaglandin-D(2) ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-ketoreductase activity","type":"related"},{"name":"prostaglandin-D2 11-reductase activity","type":"related"},{"name":"prostaglandin-D2 ketoreductase activity","type":"related"},{"name":"prostaglandin-F synthetase activity","type":"related"},{"name":"reductase, 15-hydroxy-11-oxoprostaglandin","type":"related"},{"name":"synthetase, prostaglandin F2alpha","type":"related"}],"termid":"GO:0047017"}


id: GO:0008261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with allatostatin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"allatostatin receptor activity","termid":"GO:0008261"}


id: PBO:0052976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laccase domain containing 1","termid":"PBO:0052976"}


id: FYPO:0003755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype","synonyms":[{"name":"abnormal cell phenotype during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"abnormal vegetative fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003755"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: GO:0004828
data:
  {"annotated_genes":["SJAG_04762","SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90802,91575],"is_not":false,"summary":null,"term":"GO:0004828"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser).","definition_xrefs":["EC:6.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04762":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"serine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-379992","RHEA:12292","Reactome:R-HSA-380239","MetaCyc:SERINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-serine:tRNASer ligase (AMP-forming)","type":"related"},{"name":"SerRS activity","type":"related"},{"name":"serine translase activity","type":"related"},{"name":"seryl-tRNA synthetase activity","type":"exact"},{"name":"seryl-transfer RNA synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleate synthetase activity","type":"related"},{"name":"seryl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004828","terms_by_termid":{"GO:0004828":null}}


id: PBO:0080117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucuronate decarboxylase 1","termid":"PBO:0080117"}


id: PBO:0049973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1B","termid":"PBO:0049973"}


id: GO:0016751
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"S-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016751","terms_by_termid":{"GO:0004149":null}}


id: PBO:0110343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CANT1 pseudogene 1","termid":"PBO:0110343"}


id: PBO:0066405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA proto-oncogene, NF-kB subunit","termid":"PBO:0066405"}


id: GO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal cell differentiation","synonyms":[{"name":"regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045604"}


id: PBO:0063324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCMTD1 divergent transcript","termid":"PBO:0063324"}


id: GO:0015870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"acetate ester transport","termid":"GO:1901374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetylcholine transport","termid":"GO:0015870"}


id: PBO:0063337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 2","termid":"PBO:0063337"}


id: FYECO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zymolyase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zymolyase","termid":"FYECO:0000298"}


id: GO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:16551262","PMID:16319493","GOC:add","PMID:15826826","PMID:16551252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte homeostasis","termid":"GO:0002260"}


id: FYPO:0001842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased adenylyl cyclase activity","synonyms":[{"name":"increased adenylate cyclase activity","type":"exact"}],"termid":"FYPO:0001842"}


id: PATO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 180 degrees to another entity.","definition_xrefs":["maths.org:maths.org"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex angle to","termid":"PATO:0001053"}


id: PBO:0016523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin HorseTail","termid":"PBO:0016523"}


id: GO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-8-carboxynaphthalene + O2 = 2-carboxy-2-hydroxy-8-carboxychromene.","definition_xrefs":["UM-BBD_reactionID:r0790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxy-8-carboxynaphthalene dioxygenase activity","termid":"GO:0034527"}


id: GO:0033105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure, composed of a monolayer of glycolipids with embedded proteins, that encloses the pigments and other contents of the chlorosome.","definition_xrefs":["PMID:14729689","PMID:17303128","PMID:14507718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"chlorosome","termid":"GO:0046858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlorosome envelope","synonyms":[{"name":"chlorosome membrane","type":"exact"}],"termid":"GO:0033105"}


id: GO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"positively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell differentiation","synonyms":[{"name":"activation of glial cell differentiation","type":"narrow"},{"name":"positive regulation of glia cell differentiation","type":"exact"},{"name":"positive regulation of neuroglia differentiation","type":"exact"},{"name":"stimulation of glial cell differentiation","type":"narrow"},{"name":"up regulation of glial cell differentiation","type":"exact"},{"name":"up-regulation of glial cell differentiation","type":"exact"},{"name":"upregulation of glial cell differentiation","type":"exact"}],"termid":"GO:0045687"}


id: PBO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitochondrion_inheritance","termid":"PBO:0030938"}


id: PBO:0051493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 10","termid":"PBO:0051493"}


id: PBO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bfr1 binding protein ortholog Sos7","termid":"PBO:0000882"}


id: PBO:0070106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 20 pseudogene","termid":"PBO:0070106"}


id: GO:0075288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"negatively_regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangiospore formation","termid":"GO:0075288"}


id: PBO:0026809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_ascospore_wall","termid":"PBO:0026809"}


id: PBO:0013782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1 (predicted)","termid":"PBO:0013782"}


id: FYPO:0000409
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115663,115664,115665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"delayed cell cycle phase transition","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: delayed","type":"related"},{"name":"delayed cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"delayed cell cycle phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000409","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: PBO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 5","termid":"PBO:0048811"}


id: PBO:0027217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_large:small_ribosomal_subunit_ratio","termid":"PBO:0027217"}


id: PBO:0086483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative, non-essential component vacuolar ATPase; conserved in fungi; SWAT-GFP fusion protein localizes to vacuole membrane; partially overlaps the dubious genes YPR169W-A, YPR170W-A and YRP170C","termid":"PBO:0086483"}


id: GO:0072173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric tubule are generated and organized from an epithelium. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"metanephric tubule development","termid":"GO:0072170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule morphogenesis","termid":"GO:0072173"}


id: PBO:0057518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 636","termid":"PBO:0057518"}


id: PBO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 5","termid":"PBO:0052080"}


id: GO:0061599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction adenylyl-molybdopterin + molybdate = molybdenum cofactor + AMP.","definition_xrefs":["GOC:dph","EC:2.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"molybdopterin molybdotransferase activity","secondary_identifiers":["RHEA:35047","Reactome:R-HSA-947531"],"termid":"GO:0061599"}


id: PATO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the lateral side","termid":"PATO:0002176"}


id: GO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a subtype 3 bombesin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"subtype 3 bombesin receptor binding","synonyms":[{"name":"subtype 3 bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031706"}


id: PBO:0064024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 58","termid":"PBO:0064024"}


id: PBO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1","termid":"PBO:0051645"}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: GO:1900036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"positively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to heat","synonyms":[{"name":"activation of cellular response to heat","type":"related"},{"name":"activation of cellular response to heat stress","type":"exact"},{"name":"positive regulation of cellular response to heat stress","type":"exact"},{"name":"up regulation of cellular response to heat","type":"related"},{"name":"up regulation of cellular response to heat stress","type":"exact"},{"name":"up-regulation of cellular response to heat","type":"related"},{"name":"up-regulation of cellular response to heat stress","type":"exact"},{"name":"upregulation of cellular response to heat","type":"related"},{"name":"upregulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900036"}


id: PBO:0028210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-queuosine_absent_from_tRNA","termid":"PBO:0028210"}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:mlg","PMID:12169620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: PBO:0055588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3024","termid":"PBO:0055588"}


id: GO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of initiation of T cell receptor signaling (obsolete GO:0023011)","synonyms":[{"name":"positive regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"positive regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023011"}


id: GO:0042973
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667","SJAG_02192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90168,91243,96270],"is_not":false,"summary":null,"term":"GO:0042973"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_02192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucan endo-1,3-beta-D-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.39-RXN"],"synonyms":[{"name":"(1->3)-beta-glucan 3-glucanohydrolase activity","type":"related"},{"name":"(1->3)-beta-glucan endohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,3-glucanase","type":"broad"},{"name":"callase activity","type":"related"},{"name":"endo-(1,3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-(1->3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-D-glucanase","type":"broad"},{"name":"endo-1,3-beta-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-glucosidase activity","type":"broad"},{"name":"kitalase activity","type":"related"},{"name":"laminaranase activity","type":"broad"},{"name":"laminarinase activity","type":"broad"},{"name":"oligo-1,3-glucosidase activity","type":"related"}],"termid":"GO:0042973","terms_by_termid":{"GO:0042973":null}}


id: GO:0006634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexadecanal, the C16 straight chain aldehyde.","direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexadecanal biosynthetic process","synonyms":[{"name":"hexadecanal anabolism","type":"exact"},{"name":"hexadecanal biosynthesis","type":"exact"},{"name":"hexadecanal formation","type":"exact"},{"name":"hexadecanal synthesis","type":"exact"},{"name":"palmitaldehyde biosynthesis","type":"exact"},{"name":"palmitaldehyde biosynthetic process","type":"exact"}],"termid":"GO:0006634"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["PMID:12828635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: PBO:0091854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25","termid":"PBO:0091854"}


id: PBO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 5","termid":"PBO:0075175"}


id: PBO:0039578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and ubiquitin domain containing 1","termid":"PBO:0039578"}


id: PBO:0069572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 844, pseudogene","termid":"PBO:0069572"}


id: PBO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035740"}


id: GO:0009436
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97152,101206],"is_not":false,"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"glyoxylate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYOXDEG-PWY"],"synonyms":[{"name":"glyoxylate breakdown","type":"exact"},{"name":"glyoxylate catabolism","type":"exact"},{"name":"glyoxylate degradation","type":"exact"}],"termid":"GO:0009436","terms_by_termid":{"GO:0009436":null}}


id: GO:0035375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a zymogen, an enzymatically inactive precursor of an enzyme that is often convertible to an active enzyme by proteolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"zymogen binding","synonyms":[{"name":"proenzyme binding","type":"narrow"}],"termid":"GO:0035375"}


id: GO:1902138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"(-)-secoisolariciresinol metabolic process","termid":"GO:1902136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-secoisolariciresinol biosynthetic process","synonyms":[{"name":"(-)-secoisolariciresinol anabolism","type":"exact"},{"name":"(-)-secoisolariciresinol biosynthesis","type":"exact"},{"name":"(-)-secoisolariciresinol formation","type":"exact"},{"name":"(-)-secoisolariciresinol synthesis","type":"exact"}],"termid":"GO:1902138"}


id: PBO:0057375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aq","termid":"PBO:0057375"}


id: PBO:0057774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2277","termid":"PBO:0057774"}


id: MOD:00653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an palmitoylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-palmitoylated residue","synonyms":[{"name":"S-hexadecanoylated residue","type":"exact"},{"name":"SPamRes","type":"exact"}],"termid":"MOD:00653"}


id: PBO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-14 (pseudogene)","termid":"PBO:0051326"}


id: PBO:0081578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF503 antisense RNA 2","termid":"PBO:0081578"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: PR:O13732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15A10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.12c","secondary_identifiers":["UniProtKB:O13732"],"synonyms":[{"name":"Spom972h-TRAPPC2L","type":"exact"}],"termid":"PR:O13732"}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: PBO:0051262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-4 (pseudogene)","termid":"PBO:0051262"}


id: GO:0110084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"negative regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903500"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0000281","GO:0007049","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110084"}


id: PBO:0083391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF AIM9/YER080W","termid":"PBO:0083391"}


id: GO:0035190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nuclei within the syncytial embryo of insects. These precise temporal and spatial patterns of nuclear movement are coordinated with mitotic divisons and are required during blastoderm formation to reposition dividing nuclei from the interior of the syncytial embryo to the cortex.","definition_xrefs":["PMID:8314839","ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"syncytial nuclear migration","termid":"GO:0035190"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0036494"}


id: PBO:0017790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4 (predicted)","termid":"PBO:0017790"}


id: PBO:0059886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 9","termid":"PBO:0059886"}


id: PBO:0066138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor 1","termid":"PBO:0066138"}


id: PBO:0050858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylcysteine carboxyl methyltransferase","termid":"PBO:0050858"}


id: PBO:0073692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 4","termid":"PBO:0073692"}


id: PBO:0057834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3150B host gene","termid":"PBO:0057834"}


id: RO:HOM0000046
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves not recombining and subsequently differentiated sex chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_chromosomal_homology_relationship_with","termid":"RO:HOM0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_gametology_relationship_with","synonyms":[{"name":"gametologous to","type":"exact"}],"termid":"RO:HOM0000046"}


id: GO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric sinus over time, from its formation to the mature structure. The pronephric sinus is an ill-defined capillary network that lies between the pronephric tubules.","definition_xrefs":["PMID:10535314","XAO:0000385","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric sinus development","termid":"GO:0039012"}


id: GO:0102900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydroabietadienal + NADPH + O2 = dehydroabietic acid + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dehydroabietadienal hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8534"],"termid":"GO:0102900"}


id: PBO:0074355
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: GO:0009914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hormone transport","termid":"GO:0009914"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: PBO:0031144
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_beta-glucan_level","termid":"PBO:0031144"}


id: GO:0038108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by leptin binding to its receptor on the surface of a cell, which reduces appetite, the desire or physical craving for food.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19150989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of appetite","termid":"GO:0032099"},{"relation_name":"is_a","term_name":"leptin-mediated signaling pathway","termid":"GO:0033210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of appetite by leptin-mediated signaling pathway","synonyms":[{"name":"inhibition of appetite by leptin signaling","type":"exact"},{"name":"negative regulation of appetite by leptin-mediated signalling pathway","type":"exact"},{"name":"reduction of appetite by leptin-mediated signaling","type":"exact"},{"name":"suppression of appetite by leptin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038108"}


id: PBO:0081537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 446","termid":"PBO:0081537"}


id: PBO:0002782
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex histone acetyltransferase catalytic subunit Gcn5","termid":"PBO:0002782"}


id: GO:0042285
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylosyltransferase activity","termid":"GO:0042285"}


id: GO:0065008
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id: PBO:0084882
data:
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id: FYPO:0001785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sterol binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sterol binding","synonyms":[{"name":"abnormal cholesterol binding","type":"narrow"},{"name":"abnormal ergosterol binding","type":"narrow"}],"termid":"FYPO:0001785"}


id: GO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein levels (obsolete GO:0075344)","termid":"GO:0075344"}


id: PBO:0056520
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mbt domain containing 1","termid":"PBO:0056520"}


id: SO:0002300
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id: PBO:0041642
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 H","termid":"PBO:0041642"}


id: PR:Q09908
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWM histone demethylase complex subunit phf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.08c","synonyms":[{"name":"PHD finger domain-containing protein phf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-phf2","type":"exact"}],"termid":"PR:Q09908"}


id: PBO:0029302
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id: MOD:00983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asp transamidation with piperidine","termid":"MOD:00983"}


id: GO:0008672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-glucarate = pyruvate + tartronate semialdehyde.","definition_xrefs":["EC:4.1.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxyglucarate aldolase activity","secondary_identifiers":["RHEA:10268","MetaCyc:KDGALDOL-RXN"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-glucarate tartronate-semialdehyde-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-glucarate tartronate-semialdehyde-lyase activity","type":"related"},{"name":"2-keto-3-deoxyglucarate aldolase activity","type":"related"},{"name":"alpha-keto-beta-deoxy-D-glucarate aldolase activity","type":"related"}],"termid":"GO:0008672"}


id: PBO:0088860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus-vacuole junction protein Nvj2","termid":"PBO:0088860"}


id: PBO:0091480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase","termid":"PBO:0091480"}


id: PBO:0054594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1997","termid":"PBO:0054594"}


id: PBO:0075827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 2","termid":"PBO:0075827"}


id: PBO:0047345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2 pseudogene 1","termid":"PBO:0047345"}


id: PR:O94687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tas3 gene.","definition_xrefs":["UniProtKB:O94687","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-induced transcriptional silencing complex protein tas3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.03c","synonyms":[{"name":"RITS protein tas3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tas3","type":"exact"}],"termid":"PR:O94687"}


id: PBO:0074015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 6","termid":"PBO:0074015"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: GO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate + succinyl-CoA = citramalyl-CoA + succinate.","definition_xrefs":["PMID:16547052","RHEA:38287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"succinate-citramalate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.7-RXN"],"synonyms":[{"name":"citramalate coenzyme A-transferase activity","type":"exact"},{"name":"itaconate CoA-transferase activity","type":"exact"},{"name":"succinyl coenzyme A-citramalyl coenzyme A transferase activity","type":"exact"},{"name":"succinyl-CoA:citramalate CoA-transferase activity","type":"exact"}],"termid":"GO:0047370"}


id: PBO:0049552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 14","termid":"PBO:0049552"}


id: PBO:0064881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2CA divergent transcript","termid":"PBO:0064881"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: GO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide transport","secondary_identifiers":["GO:0015921"],"synonyms":[{"name":"LPS export","type":"narrow"},{"name":"LPS transport","type":"exact"},{"name":"lipopolysaccharide export","type":"narrow"}],"termid":"GO:0015920"}


id: PBO:0076100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX5 divergent transcript","termid":"PBO:0076100"}


id: PBO:0054735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2144","termid":"PBO:0054735"}


id: GO:1903418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane of cell tip.","definition_xrefs":["PMID:25157670","PMID:27852900","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to plasma membrane of cell tip","synonyms":[{"name":"protein localisation in plasma membrane of cell tip","type":"exact"},{"name":"protein localisation to plasma membrane of cell tip","type":"exact"},{"name":"protein localization in plasma membrane of cell tip","type":"exact"}],"termid":"GO:1903418"}


id: PBO:0043431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 3","termid":"PBO:0043431"}


id: GO:0002707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"negatively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte mediated immunity","synonyms":[{"name":"down regulation of lymphocyte mediated immunity","type":"exact"},{"name":"down-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"downregulation of lymphocyte mediated immunity","type":"exact"},{"name":"inhibition of lymphocyte mediated immunity","type":"narrow"}],"termid":"GO:0002707"}


id: GO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized, terminal region of a neuron projection such as an axon or a dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection terminus","synonyms":[{"name":"nerve terminal","type":"related"},{"name":"neuron projection terminal","type":"exact"},{"name":"neuron terminal specialization","type":"exact"}],"termid":"GO:0044306"}


id: GO:0045267
data:
  {"annotated_genes":["SJAG_02598","SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88988,85306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005754"}]},"cv_name":"cellular_component","definition":"The hexamer that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02564":null,"SJAG_02598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase, catalytic core","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"exact"}],"termid":"GO:0045267","terms_by_termid":{"GO:0005754":null}}


id: GO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-A subunits (sometimes known as activin beta-A or activin/inhibin beta-A).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"activin A complex","secondary_identifiers":["GO:0048181"],"termid":"GO:0043509"}


id: PBO:0058731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-1","termid":"PBO:0058731"}


id: GO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","GOC:bf","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adrenergic receptor activity","secondary_identifiers":["Wikipedia:Adrenergic_receptor"],"synonyms":[{"name":"adrenoceptor activity","type":"exact"}],"termid":"GO:0004935"}


id: GO:1902562
data:
  {"annotated_genes":["SJAG_03036","SJAG_00349","SJAG_03230","SJAG_03792","SJAG_05282","SJAG_02385","SJAG_00783","SJAG_04355","SJAG_03579","SJAG_01016","SJAG_01385","SJAG_04793","SJAG_02990","SJAG_03628","SJAG_03145","SJAG_00187","SJAG_04097"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[97813,114634,93366,100163,90438,90150,100840,88517,95796,97094,111699,105196,108364,95086,103001,86855,109275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of H4 histone acetyltransferase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:23775086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"H4 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hpa3 (homo-)dimer","type":"narrow"},{"name":"Hpa3 complex","type":"narrow"}],"termid":"GO:1902562","terms_by_termid":{"GO:0035267":null,"GO:0043189":null}}


id: PBO:0075776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 5","termid":"PBO:0075776"}


id: PBO:0057884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3188","termid":"PBO:0057884"}


id: FYPO:0001190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001191"],"synonyms":[{"name":"sensitive to Lyticase","type":"narrow"},{"name":"sensitive to Novozyme 234","type":"narrow"},{"name":"sensitive to Zymolyase","type":"narrow"},{"name":"hypersensitive to cell wall-degrading enzymes","type":"exact"},{"name":"sensitive to beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"sensitive to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"sensitive to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"sensitive to lysing enzymes from Trichoderma harzianum","type":"narrow"}],"termid":"FYPO:0001190"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: GO:0016006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A product of the fusion of the mitochondria during spermatogenesis. After the completion of meiosis the mitochondria of the spermatid collect along side the nucleus and fuse into two masses; these wrap around each other to produce the spherical Nebenkern. During flagellum elongation the Nebenkern unfolds and the two derivatives (major and minor mitochondrial derivatives) elongate down the axoneme.","definition_xrefs":["GOC:ma","PMID:25265054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Nebenkern","termid":"GO:0016006"}


id: PR:Q9UTH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup132 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.04","synonyms":[{"name":"Spom972h-nup132","type":"exact"},{"name":"nuclear pore protein nup132 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH0"}


id: GO:0046339
data:
  {"annotated_genes":["SJAG_03609","SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108187,110306],"is_not":false,"summary":null,"term":"GO:0046339"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.","definition_xrefs":["PMID:11481335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03162":null,"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diacylglycerol metabolism","type":"exact"},{"name":"diglyceride metabolism","type":"exact"}],"termid":"GO:0046339","terms_by_termid":{"GO:0046339":null}}


id: PBO:0069418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 680, pseudogene","termid":"PBO:0069418"}


id: GO:0032712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"negatively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-3 production","secondary_identifiers":["GO:0045400"],"synonyms":[{"name":"down regulation of interleukin-3 production","type":"exact"},{"name":"down-regulation of interleukin-3 production","type":"exact"},{"name":"downregulation of interleukin-3 production","type":"exact"},{"name":"inhibition of interleukin-3 production","type":"narrow"},{"name":"negative regulation of IL-3 production","type":"exact"},{"name":"negative regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032712"}


id: PBO:0065651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type D","termid":"PBO:0065651"}


id: GO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine.","definition_xrefs":["EC:2.4.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"N-acetyllactosamine synthase activity","secondary_identifiers":["MetaCyc:N-ACETYLLACTOSAMINE-SYNTHASE-RXN","RHEA:17745"],"synonyms":[{"name":"Gal-T","type":"related"},{"name":"N-acetylglucosamine (beta-1,4)galactosyltransferase activity","type":"related"},{"name":"N-acetylglucosamine beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"N-acetyllactosamine synthetase activity","type":"related"},{"name":"NAL synthetase activity","type":"related"},{"name":"UDP-Gal:N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose N-acetylglucosamine beta-4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetylglucosaminyl(beta-1,4)galactosyltransferase activity","type":"related"},{"name":"acetyllactosamine synthetase activity","type":"related"},{"name":"beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-1,4-GalT","type":"related"},{"name":"beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"lactosamine synthase activity","type":"related"},{"name":"lactosamine synthetase activity","type":"related"},{"name":"lactose synthetase A protein","type":"related"},{"name":"uridine diphosphogalactose-acetylglucosamine galactosyltransferase activity","type":"related"}],"termid":"GO:0003945"}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: GO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002490"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: PBO:0031415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle","termid":"PBO:0031415"}


id: PBO:0080667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 12","termid":"PBO:0080667"}


id: GO:0071090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA2b-ITGB3-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071090"}


id: GO:0030845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway which proceeds with inhibition of phospholipase C (PLC) activity and a subsequent decrease in the levels of cellular inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:dph","PMID:8280098","GOC:mah","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-inhibiting G protein-coupled receptor signaling pathway","synonyms":[{"name":"G-protein-coupled inhibitory pathway of phospholipase C","type":"exact"},{"name":"GPCR signaling pathway coupled to inhibition of phospholipase C activity","type":"exact"},{"name":"GPCR signaling pathway via inhibition of PLC","type":"exact"},{"name":"PLC-inhibiting GPCR signaling pathway","type":"exact"},{"name":"inhibition of phospholipase C activity involved in G-protein coupled receptor signalling pathway","type":"narrow"},{"name":"phospholipase C inhibition","type":"related"},{"name":"phospholipase C-inhibiting G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0030845"}


id: GO:1900890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane metabolic process","synonyms":[{"name":"regulation of pentadecane metabolism","type":"exact"}],"termid":"GO:1900890"}


id: GO:0070209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is part of the chromatin remodeling machinery; the acronym stands for ASsembly of Tel, Rvb and Atm-like kinase. In Saccharomyces cerevisiae this complex includes Rvb1p, Rvb2p, Tra1p, Tel2p, Asa1p, Ttilp and Tti2p.","definition_xrefs":["PMID:19040720","GOC:rb","PMID:22505622"],"gene_count":0,"genotype_count":0,"name":"obsolete ASTRA complex (obsolete GO:0070209)","termid":"GO:0070209"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: GO:0140855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 57) + ATP = histone H3-phosphoserine (position 57) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 57 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0003824","GO:0140096","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"histone H3S57 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S57 specific)","type":"exact"}],"termid":"GO:0140855"}


id: GO:0034902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan sulfate + H2O = endosulfan diol + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"endosulfan sulfate hydrolase activity","termid":"GO:0034902"}


id: PBO:0091062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter","termid":"PBO:0091062"}


id: GO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"negatively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"down regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"down-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"downregulation of cytokine mediated signaling pathway","type":"exact"},{"name":"inhibition of cytokine mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0001960"}


id: GO:1900028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"negatively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ruffle assembly","synonyms":[{"name":"down regulation of membrane ruffle formation","type":"exact"},{"name":"down regulation of membrane ruffling","type":"exact"},{"name":"down regulation of ruffle assembly","type":"related"},{"name":"negative regulation of membrane ruffle formation","type":"exact"},{"name":"negative regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900028"}


id: PBO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpression causing Deoxyglucose Resistance","termid":"PBO:0033830"}


id: PBO:0038627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 3","termid":"PBO:0038627"}


id: GO:0042274
data:
  {"annotated_genes":["SJAG_04069","SJAG_02335","SJAG_01907","SJAG_02911","SJAG_03796","SJAG_04342","SJAG_02644","SJAG_03905","SJAG_04224","SJAG_04582","SJAG_02477","SJAG_00889","SJAG_05187","SJAG_03262","SJAG_02681","SJAG_02662","SJAG_02553","SJAG_01623","SJAG_01323","SJAG_02547","SJAG_03028","SJAG_01764","SJAG_04472","SJAG_03654","SJAG_02749","SJAG_00986","SJAG_04916","SJAG_01272","SJAG_02475","SJAG_02046","SJAG_00572","SJAG_00965","SJAG_01618","SJAG_02184","SJAG_00344","SJAG_03846","SJAG_03954","SJAG_01609","SJAG_01115","SJAG_02250","SJAG_06613","SJAG_00955","SJAG_00294","SJAG_05018","SJAG_01420","SJAG_02702","SJAG_02340","SJAG_00513","SJAG_01201","SJAG_00772","SJAG_03755","SJAG_04979","SJAG_04687","SJAG_04746","SJAG_00544","SJAG_02300","SJAG_03569","SJAG_03617","SJAG_00897","SJAG_03425","SJAG_03234","SJAG_00523","SJAG_01877","SJAG_02358","SJAG_04908","SJAG_04339","SJAG_01296","SJAG_03798","SJAG_04900","SJAG_02372","SJAG_04524","SJAG_02025","SJAG_03857","SJAG_03583","SJAG_04174","SJAG_04562","SJAG_03952","SJAG_00945","SJAG_01169","SJAG_02499","SJAG_03156","SJAG_01551","SJAG_00562","SJAG_00879","SJAG_02020","SJAG_02608","SJAG_02479","SJAG_03410","SJAG_04424","SJAG_01347","SJAG_03252","SJAG_03341","SJAG_02803","SJAG_03077","SJAG_04029","SJAG_01752","SJAG_01548","SJAG_03422","SJAG_01338","SJAG_01250","SJAG_03424","SJAG_01604","SJAG_02094","SJAG_02821","SJAG_03539","SJAG_04033","SJAG_04998"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87515,87658,87829,88017,90618,90695,90696,93215,96600,97859,97860,97861,99037,99212,99945,101688,103160,104047,104048,105682,107743,107744,107745,108927,113481,114777],"is_not":false,"summary":null,"term":"GO:0042274"},{"annotations":[103752,95935,111310],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[100896,111501,109617,101686,89553,92637,100680,101779,114664,104082,95614,92929,101778,95936,90843,105138,111417,99254,103753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[101687],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[105139,111311,95937,103754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[89837,96586,106702,97809,106108,109669,94006,85213,91869,91967,94921,108122,88191,100708,84880,106232,87462,94659,98051,112547,103495,90892,89419,92995,88421],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030490"},{"annotations":[97694,96330,96714,85414,94472,95286,95285,101803,107905,102099,91819,101802,103094,91820,90464,105231,104836,87380,93178,111856,94473,95323,106521,110834,96881,84025,102338,88776,84515,112859,103232,105859,97530,112667],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000462"},{"annotations":[112548,107537,97856,102932,99992,107741,93557,96591,107740,92707,114680,90893,97858,107906,86051,93558,97857,73925,101794,101795,102933,107538,108204,107742],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[88754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"},{"annotations":[109202,103755],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":107,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00889":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01201":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01296":null,"SJAG_01323":null,"SJAG_01338":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01752":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02094":null,"SJAG_02184":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02372":null,"SJAG_02475":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03262":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03583":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03905":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04342":null,"SJAG_04424":null,"SJAG_04472":null,"SJAG_04524":null,"SJAG_04562":null,"SJAG_04582":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_04998":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"ribosomal small subunit biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal small subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042274","terms_by_termid":{"GO:0000028":null,"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:0034462":null,"GO:0042274":null,"GO:1904812":null}}


