# genes

id: SJAG_04488
data:
  {"cv_annotations":{"biological_process":[{"annotations":[95109],"is_not":false,"summary":null,"term":"GO:0006370"}],"cellular_component":[{"annotations":[78484],"is_not":false,"summary":null,"term":"GO:0031533"},{"annotations":[95108],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[95110],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[95111],"is_not":false,"summary":null,"term":"GO:0140818"},{"annotations":[95112],"is_not":false,"summary":null,"term":"GO:0004651"}]},"dbxrefs":["InterPro:IPR004206","InterPro:IPR033469","EnsemblGenomes-Tr:EEB09291","InterPro:IPR040343","EnsemblGenomes-Gn:SJAG_04488","GOA:B6K6Y7","UniProtKB/TrEMBL:B6K6Y7","InterPro:IPR037009"],"deletion_viability":"unknown","disordered_region_coords":[[4,6],[8,54],[56,58],[235,241],[243,245],[264,273],[275,281]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"},{"name":"dut1","uniquename":"SJAG_04487"},{"name":"cdr1","uniquename":"SJAG_04486"},{"name":"rpn1301","uniquename":"SJAG_04484"},{"name":"gas4","uniquename":"SJAG_04483"},{"name":"qrs1","uniquename":"SJAG_04482"}],"genes_by_uniquename":{"SJAG_04488":null,"SPAC644.04":null,"YMR180C":null,"YPL228W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.100.10","interpro_id":"IPR037009","interpro_name":"mRNA triphosphatase Cet1-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":322,"score":0.0,"start":62}],"model":"4pn0C00","name":"mRNA triphosphatase Cet1-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02940","interpro_id":"IPR004206","interpro_name":"mRNA triphosphatase Cet1-like","interpro_type":"Domain","locations":[{"end":284,"score":0.0,"start":79}],"model":"PF02940","name":"mRNA capping enzyme, beta chain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28118","interpro_id":"IPR040343","interpro_name":"RNA 5'-triphosphatase Cet1/Ctl1","interpro_type":"Family","locations":[{"end":322,"score":0.0,"start":30}],"model":"PTHR28118:SF1","name":"POLYNUCLEOTIDE 5'-TRIPHOSPHATASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55154","interpro_id":"IPR033469","interpro_name":"CYTH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":319,"score":0.0,"start":46}],"model":"0036307","name":"CYTH-like phosphatases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07470","interpro_id":"IPR004206","interpro_name":"mRNA triphosphatase Cet1-like","interpro_type":"Domain","locations":[{"end":319,"score":0.0,"start":81}],"model":"cd07470","name":"CYTH-like mRNA triphosphatase (RTPase) component of the mRNA capping apparatus"}],"location":{"chromosome_name":"supercont5.3","end_pos":775075,"start_pos":774021,"strand":"forward"},"name":"pct1","ortholog_annotations":[{"gene_uniquename":"SJAG_04488","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC644.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04488","ortholog_taxonid":4932,"ortholog_uniquename":"YMR180C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04488","ortholog_taxonid":4932,"ortholog_uniquename":"YPL228W","reference_uniquename":"PMID:29761456"}],"product":"RNA 5'-triphosphatase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016788","GO:0005634","GO:0016071","GO:0016887","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004651":null,"GO:0005634":null,"GO:0006370":null,"GO:0016887":null,"GO:0031533":null,"GO:0140818":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04488.1"],"transcripts_by_uniquename":{"SJAG_04488.1":null},"uniprot_identifier":"B6K6Y7","uniquename":"SJAG_04488"}


id: SJAG_04489
data:
  {"alleles_by_uniquename":{"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"}},"coiled_coil_coords":[[18,19],[69,89]],"cv_annotations":{"biological_process":[{"annotations":[94096],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[94097],"is_not":false,"summary":null,"term":"GO:0007084"},{"annotations":[94098],"is_not":false,"summary":null,"term":"GO:0043328"}],"cellular_component":[{"annotations":[94092],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[94093],"is_not":false,"summary":null,"term":"GO:0000815"},{"annotations":[94094],"is_not":false,"summary":null,"term":"GO:0180028"},{"annotations":[94095],"is_not":false,"summary":null,"term":"GO:0005771"}],"single_locus_phenotype":[{"annotations":[115306],"is_not":false,"summary":null,"term":"FYPO:0001370"},{"annotations":[115300,115301,115305],"is_not":false,"summary":null,"term":"FYPO:0007771"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09292","GOA:B6K6Y8","EnsemblGenomes-Gn:SJAG_04489","InterPro:IPR005024","UniProtKB/TrEMBL:B6K6Y8"],"deletion_viability":"unknown","disordered_region_coords":[[20,19],[43,44],[48,52],[57,59],[63,68],[70,81],[83,84],[88,91],[97,116],[118,120],[123,169],[190,199],[17,17]],"feature_publications":[{"reference_uniquename":"PMID:32109380","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"},{"name":"dut1","uniquename":"SJAG_04487"},{"name":"cdr1","uniquename":"SJAG_04486"},{"name":"rpn1301","uniquename":"SJAG_04484"},{"name":"gas4","uniquename":"SJAG_04483"}],"genes_by_uniquename":{"HGNC:24537":null,"HGNC:30216":null,"SJAG_01745":null,"SJAG_03892":null,"SJAG_04489":null,"SPAC4F8.01":null,"YKL002W":null},"genotypes_by_uniquename":{"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.140.1230","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":184,"score":0.0,"start":9}],"model":"2gd5A00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03357","interpro_id":"IPR005024","interpro_name":"Snf7 family","interpro_type":"Family","locations":[{"end":185,"score":3.700000071918295e-28,"start":22}],"model":"PF03357","name":"Snf7"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10476","interpro_id":"IPR005024","interpro_name":"Snf7 family","interpro_type":"Family","locations":[{"end":191,"score":4.799993746713585e-40,"start":7}],"model":"PTHR10476:SF4","name":"CHARGED MULTIVESICULAR BODY PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":773618,"start_pos":772992,"strand":"reverse"},"low_complexity_region_coords":[[51,64],[97,108],[147,172]],"name":"did4","ortholog_annotations":[{"gene_uniquename":"SJAG_04489","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24537","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04489","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30216","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04489","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04489","ortholog_taxonid":4932,"ortholog_uniquename":"YKL002W","reference_uniquename":"PMID:29761456"}],"physical_interactions":[{"evidence":"Reconstituted Complex","gene_uniquename":"SJAG_04489","interactor_uniquename":"SJAG_03892","reference_uniquename":"PMID:32109380","throughput":"low"}],"product":"ESCRT III complex subunit Did4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:32109380":null},"subset_termids":["GO:0031410","GO:0005634","GO:0005768","FYPO:0001320","GO:0016192","FYPO:0000138","GO:0061024","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0001370":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000815":null,"GO:0005737":null,"GO:0005771":null,"GO:0007084":null,"GO:0043328":null,"GO:0045324":null,"GO:0180028":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04489.1"],"transcripts_by_uniquename":{"SJAG_04489.1":null},"uniprot_identifier":"B6K6Y8","uniquename":"SJAG_04489"}


id: SJAG_04490
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94101],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94099],"is_not":false,"summary":null,"term":"GO:0005762"},{"annotations":[94100],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[94102],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[94103],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR005825","InterPro:IPR008991","InterPro:IPR005824","InterPro:IPR014722","EnsemblGenomes-Tr:EEB09293","UniProtKB/TrEMBL:B6K6Y9","GOA:B6K6Y9","InterPro:IPR003256","EnsemblGenomes-Gn:SJAG_04490"],"deletion_viability":"unknown","disordered_region_coords":[[58,61],[124,125],[161,180],[182,188],[194,205],[207,221],[227,231],[241,270]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"},{"name":"dut1","uniquename":"SJAG_04487"},{"name":"cdr1","uniquename":"SJAG_04486"},{"name":"rpn1301","uniquename":"SJAG_04484"}],"genes_by_uniquename":{"HGNC:14037":null,"SJAG_04490":null,"SPAC4F8.02c":null,"YPL173W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.30","interpro_id":"IPR014722","interpro_name":"Ribosomal protein L2, domain 2","interpro_type":"Homologous_superfamily","locations":[{"end":143,"score":9.499999528359004e-13,"start":30}],"model":"5dm7R00","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01108","interpro_id":"IPR005825","interpro_name":"Ribosomal protein L24/L26, conserved site","interpro_type":"Conserved_site","locations":[{"end":61,"score":0.0,"start":44}],"model":"PS01108","name":"Ribosomal protein L24 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12903","interpro_id":"IPR003256","interpro_name":"Ribosomal protein L24","interpro_type":"Family","locations":[{"end":216,"score":1.8000000361756419e-13,"start":29}],"model":"PTHR12903:SF0","name":"MITOCHONDRIAL RIBOSOMAL PROTEIN L24"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00739","interpro_id":"IPR005824","interpro_name":"KOW","interpro_type":"Domain","locations":[{"end":67,"score":0.003800000064074993,"start":40}],"model":"SM00739","name":"KOW (Kyprides, Ouzounis, Woese) motif."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50104","interpro_id":"IPR008991","interpro_name":"Translation protein SH3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":128,"score":3.2699999155119067e-15,"start":32}],"model":"0054789","name":"Translation proteins SH3-like domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":772811,"start_pos":771882,"strand":"forward"},"low_complexity_region_coords":[[67,83]],"name":"mrpl40","ortholog_annotations":[{"gene_uniquename":"SJAG_04490","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04490","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04490","ortholog_taxonid":4932,"ortholog_uniquename":"YPL173W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L24","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0005739","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003735":null,"GO:0005739":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04490.1"],"transcripts_by_uniquename":{"SJAG_04490.1":null},"uniprot_identifier":"B6K6Y9","uniquename":"SJAG_04490"}


id: SJAG_04491
data:
  {"coiled_coil_coords":[[182,202]],"cv_annotations":{"biological_process":[{"annotations":[94108],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[94104],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94105],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[94106],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[94107],"is_not":false,"summary":null,"term":"GO:0030687"}],"molecular_function":[{"annotations":[94109],"is_not":false,"summary":null,"term":"GO:0005085"}]},"dbxrefs":["InterPro:IPR018978","InterPro:IPR037188","EnsemblGenomes-Gn:SJAG_04491","EnsemblGenomes-Tr:EEB09294","InterPro:IPR018023","UniProtKB/TrEMBL:B6K6Z0","GOA:B6K6Z0","InterPro:IPR019783","InterPro:IPR036786","InterPro:IPR039100","InterPro:IPR002140"],"deletion_viability":"unknown","disordered_region_coords":[[237,238]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"},{"name":"dut1","uniquename":"SJAG_04487"},{"name":"cdr1","uniquename":"SJAG_04486"}],"genes_by_uniquename":{"HGNC:19440":null,"SJAG_04491":null,"SPAC4F8.03":null,"YLR022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.900","interpro_id":"IPR037188","interpro_name":"Ribosome maturation protein Sdo1/SBDS, central domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":172,"score":6.600000141299729e-27,"start":98}],"model":"2kdoA02","name":"SBDS protein C-terminal domain, subdomain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1250.10","interpro_id":"IPR036786","interpro_name":"Ribosome maturation protein SBDS, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":94,"score":9.699787970056384e-42,"start":1}],"model":"2l9nA01","name":"Ribosome maturation protein SBDS, N-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.240","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":240,"score":5.799999815940031e-20,"start":173}],"model":"2kdoA03","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01172","interpro_id":"IPR019783","interpro_name":"Ribosome maturation protein SDO1/SBDS, N-terminal","interpro_type":"Domain","locations":[{"end":100,"score":9.59999971364661e-34,"start":14}],"model":"PF01172","name":"Shwachman-Bodian-Diamond syndrome (SBDS) protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09377","interpro_id":"IPR018978","interpro_name":"Ribosome maturation protein SDO1/SBDS, central domain","interpro_type":"Domain","locations":[{"end":172,"score":6.400000293207712e-17,"start":109}],"model":"PF09377","name":"SBDS protein, domain II"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20268","interpro_id":"IPR046928","interpro_name":"Ribosome maturation protein SDO1/SBDS, C-terminal domain","interpro_type":"Domain","locations":[{"end":239,"score":1.3000000285385435e-17,"start":174}],"model":"PF20268","name":"SBDS protein, C-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01267","interpro_id":"IPR018023","interpro_name":"Ribosome maturation protein SBDS, conserved site","interpro_type":"Conserved_site","locations":[{"end":63,"score":0.0,"start":44}],"model":"PS01267","name":"Uncharacterized protein family UPF0023 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10927","interpro_id":"IPR039100","interpro_name":"Ribosome maturation protein Sdo1/SBDS-like","interpro_type":"Family","locations":[{"end":239,"score":0.0,"start":1}],"model":"PTHR10927:SF1","name":"RIBOSOME MATURATION PROTEIN SBDS"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF109728","interpro_id":"IPR037188","interpro_name":"Ribosome maturation protein Sdo1/SBDS, central domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":162,"score":6.540000058775959e-24,"start":89}],"model":"0049571","name":"Hypothetical protein AF0491, middle domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF89895","interpro_id":"IPR036786","interpro_name":"Ribosome maturation protein SBDS, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":94,"score":6.409999847293834e-31,"start":10}],"model":"0042212","name":"FYSH domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00291","interpro_id":"IPR002140","interpro_name":"Ribosome maturation protein Sdo1/SBDS","interpro_type":"Family","locations":[{"end":237,"score":0.0,"start":9}],"model":"TIGR00291","name":"ribosome assembly factor SBDS"}],"location":{"chromosome_name":"supercont5.3","end_pos":771670,"start_pos":770720,"strand":"reverse"},"low_complexity_region_coords":[[197,209]],"name":"sdo1","ortholog_annotations":[{"gene_uniquename":"SJAG_04491","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19440","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04491","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04491","ortholog_taxonid":4932,"ortholog_uniquename":"YLR022C","reference_uniquename":"PMID:29761456"}],"product":"SBDS family ribosome assembly protein Sdo1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005085","GO:0030234","GO:0005634","GO:0030684","GO:0098772","GO:0005730","GO:0005829","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005085":null,"GO:0005634":null,"GO:0005730":null,"GO:0005829":null,"GO:0030687":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04491.1"],"transcripts_by_uniquename":{"SJAG_04491.1":null},"uniprot_identifier":"B6K6Z0","uniquename":"SJAG_04491"}


id: SJAG_04492
data:
  {"coiled_coil_coords":[[15,45]],"cv_annotations":{"biological_process":[{"annotations":[94115],"is_not":false,"summary":null,"term":"GO:1902626"},{"annotations":[94116],"is_not":false,"summary":null,"term":"GO:0180023"},{"annotations":[94117],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[94118],"is_not":false,"summary":null,"term":"GO:0000463"}],"cellular_component":[{"annotations":[94110],"is_not":false,"summary":null,"term":"GO:0030685"},{"annotations":[94111],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[94112],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[94113],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[94114],"is_not":false,"summary":null,"term":"GO:0005732"}],"molecular_function":[{"annotations":[94119],"is_not":false,"summary":null,"term":"GO:0042134"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09295","EnsemblGenomes-Gn:SJAG_04492","GOA:B6K6Z1","InterPro:IPR007109","UniProtKB/TrEMBL:B6K6Z1"],"deletion_viability":"unknown","disordered_region_coords":[[46,49],[58,64],[68,74],[77,81],[97,99]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"},{"name":"dut1","uniquename":"SJAG_04487"}],"genes_by_uniquename":{"HGNC:30350":null,"SJAG_04492":null,"SPAC4F8.04":null,"YHR088W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10480","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":272,"score":8.900000346763186e-36,"start":94}],"model":"2cxhA01","name":"Probable brix-domain ribosomal biogenesis protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04427","interpro_id":"IPR007109","interpro_name":"Brix domain","interpro_type":"Domain","locations":[{"end":275,"score":1.4999999523982838e-22,"start":103}],"model":"PF04427","name":"Brix domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50833","interpro_id":"IPR007109","interpro_name":"Brix domain","interpro_type":"Domain","locations":[{"end":283,"score":0.0,"start":94}],"model":"PS50833","name":"Brix domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22734","interpro_id":"IPR044281","interpro_name":"U3 snoRNP protein/Ribosome production factor 1","interpro_type":"Family","locations":[{"end":305,"score":0.0,"start":3}],"model":"PTHR22734:SF3","name":"U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00879","interpro_id":"IPR007109","interpro_name":"Brix domain","interpro_type":"Domain","locations":[{"end":277,"score":0.0,"start":97}],"model":"SM00879","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52954","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":280,"score":0.0,"start":94}],"model":"0052344","name":"Class II aaRS ABD-related"}],"location":{"chromosome_name":"supercont5.3","end_pos":770419,"start_pos":769499,"strand":"reverse"},"low_complexity_region_coords":[[18,44],[67,82]],"name":"rpf1","ortholog_annotations":[{"gene_uniquename":"SJAG_04492","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30350","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04492","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04492","ortholog_taxonid":4932,"ortholog_uniquename":"YHR088W","reference_uniquename":"PMID:29761456"}],"product":"Brix domain protein Rpf1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030684","GO:0005634","GO:0005730","GO:0042254","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000463":null,"GO:0000466":null,"GO:0005634":null,"GO:0005730":null,"GO:0005732":null,"GO:0030685":null,"GO:0030687":null,"GO:0042134":null,"GO:0180023":null,"GO:1902626":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04492.1"],"transcripts_by_uniquename":{"SJAG_04492.1":null},"uniprot_identifier":"B6K6Z1","uniquename":"SJAG_04492"}


id: SJAG_04493
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94121],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94120],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[94122],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR019192","EnsemblGenomes-Tr:EEB09296","EnsemblGenomes-Gn:SJAG_04493","GOA:B6K6Z2","UniProtKB/TrEMBL:B6K6Z2"],"deletion_viability":"unknown","disordered_region_coords":[[54,60],[107,107]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"},{"name":"pct1","uniquename":"SJAG_04488"}],"genes_by_uniquename":{"HGNC:14491":null,"SJAG_04493":null,"SPAC4F8.05c":null,"YDR462W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.250.3440","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":107,"score":1.8000000105227632e-25,"start":2}],"model":"1vw4200","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09812","interpro_id":"IPR019192","interpro_name":"Ribosomal protein L28/L40, mitochondrial","interpro_type":"Family","locations":[{"end":104,"score":2.9999999050033628e-15,"start":30}],"model":"PF09812","name":"Mitochondrial ribosomal protein L28"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR39150","interpro_id":"IPR042831","interpro_name":"54S ribosomal protein L28, mitochondrial","interpro_type":"Family","locations":[{"end":105,"score":1.7999999428779406e-20,"start":3}],"model":"PTHR39150:SF1","name":"54S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL"}],"location":{"chromosome_name":"supercont5.3","end_pos":769338,"start_pos":769015,"strand":"forward"},"name":"mrpl28","ortholog_annotations":[{"gene_uniquename":"SJAG_04493","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14491","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04493","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04493","ortholog_taxonid":4932,"ortholog_uniquename":"YDR462W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L40","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0005739","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04493.1"],"transcripts_by_uniquename":{"SJAG_04493.1":null},"uniprot_identifier":"B6K6Z2","uniquename":"SJAG_04493"}


id: SJAG_04494
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94127],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[94123],"is_not":false,"summary":null,"term":"GO:0005763"},{"annotations":[94125],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[94129],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04494","InterPro:IPR005679","UniProtKB/TrEMBL:B6K6Z3","InterPro:IPR006032","InterPro:IPR012340","EnsemblGenomes-Tr:EEB09297","GOA:B6K6Z3"],"deletion_viability":"unknown","disordered_region_coords":[[39,40],[81,83],[156,157]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"},{"name":"did4","uniquename":"SJAG_04489"}],"genes_by_uniquename":{"HGNC:10380":null,"SJAG_04494":null,"SPAC4F8.06":null,"YNR036C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":157,"score":0.0,"start":32}],"model":"2vqeL00","name":"Nucleic acid-binding proteins"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00403_B","interpro_id":"IPR005679","interpro_name":"Ribosomal protein S12, bacterial-type","interpro_type":"Family","locations":[{"end":155,"score":0.0,"start":32}],"model":"MF_00403_B","name":"30S ribosomal protein S12 [rpsL]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00164","interpro_id":"IPR006032","interpro_name":"Ribosomal protein S12/S23","interpro_type":"Family","locations":[{"end":155,"score":5.900000149262695e-36,"start":45}],"model":"PF00164","name":"Ribosomal protein S12/S23"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01034","interpro_id":"IPR006032","interpro_name":"Ribosomal protein S12/S23","interpro_type":"Family","locations":[{"end":74,"score":0.0,"start":59},{"end":89,"score":0.0,"start":74},{"end":109,"score":0.0,"start":90},{"end":126,"score":0.0,"start":109},{"end":142,"score":0.0,"start":126},{"end":154,"score":0.0,"start":142}],"model":"PR01034","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00055","interpro_id":"IPR006032","interpro_name":"Ribosomal protein S12/S23","interpro_type":"Family","locations":[{"end":82,"score":0.0,"start":75}],"model":"PS00055","name":"Ribosomal protein S12 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11652","interpro_id":"IPR006032","interpro_name":"Ribosomal protein S12/S23","interpro_type":"Family","locations":[{"end":155,"score":2.2420775429197073e-44,"start":34}],"model":"PTHR11652:SF1","name":"30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50249","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":155,"score":0.0,"start":40}],"model":"0054593","name":"Nucleic acid-binding proteins"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00981","interpro_id":"IPR005679","interpro_name":"Ribosomal protein S12, bacterial-type","interpro_type":"Family","locations":[{"end":155,"score":0.0,"start":33}],"model":"TIGR00981","name":"30S ribosomal protein S12"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03368","interpro_id":"IPR005679","interpro_name":"Ribosomal protein S12, bacterial-type","interpro_type":"Family","locations":[{"end":142,"score":0.0,"start":34}],"model":"cd03368","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":766607,"start_pos":766134,"strand":"reverse"},"low_complexity_region_coords":[[44,49]],"name":"mrps12a","ortholog_annotations":[{"gene_uniquename":"SJAG_04494","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10380","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04494","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04494","ortholog_taxonid":4932,"ortholog_uniquename":"YNR036C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein S12 Mrps12a","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005739":null,"GO:0005763":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04494.1"],"transcripts_by_uniquename":{"SJAG_04494.1":null},"uniprot_identifier":"B6K6Z3","uniquename":"SJAG_04494"}


id: SJAG_04495
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94134],"is_not":false,"summary":null,"term":"GO:0061621"},{"annotations":[94135],"is_not":false,"summary":null,"term":"GO:0051156"},{"annotations":[94136],"is_not":false,"summary":null,"term":"GO:0019660"},{"annotations":[94137],"is_not":false,"summary":null,"term":"GO:0001678"}],"cellular_component":[{"annotations":[94131],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94132],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[94133],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94138],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[94139],"is_not":false,"summary":null,"term":"GO:0008865"},{"annotations":[94140],"is_not":false,"summary":null,"term":"GO:0004340"},{"annotations":[94141],"is_not":false,"summary":null,"term":"GO:0005536"},{"annotations":[94142],"is_not":false,"summary":null,"term":"GO:0019158"}]},"dbxrefs":["InterPro:IPR022673","UniProtKB/TrEMBL:B6K6Z4","InterPro:IPR022672","GOA:B6K6Z4","InterPro:IPR019807","EnsemblGenomes-Gn:SJAG_04495","EnsemblGenomes-Tr:EEB09298","InterPro:IPR001312"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"},{"name":"mrpl40","uniquename":"SJAG_04490"}],"genes_by_uniquename":{"HGNC:4195":null,"HGNC:4922":null,"HGNC:4923":null,"HGNC:4925":null,"SJAG_04495":null,"SPAC4F8.07c":null,"YCL040W":null,"YDR516C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":445,"score":0.0,"start":50}],"model":"4qs8A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.367.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":434,"score":0.0,"start":30}],"model":"4qs8A01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00349","interpro_id":"IPR022672","interpro_name":"Hexokinase, N-terminal","interpro_type":"Domain","locations":[{"end":207,"score":0.0,"start":9}],"model":"PF00349","name":"Hexokinase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03727","interpro_id":"IPR022673","interpro_name":"Hexokinase, C-terminal","interpro_type":"Domain","locations":[{"end":446,"score":0.0,"start":216}],"model":"PF03727","name":"Hexokinase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00475","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":81,"score":0.0,"start":65},{"end":164,"score":0.0,"start":139},{"end":207,"score":0.0,"start":191},{"end":230,"score":0.0,"start":216},{"end":302,"score":0.0,"start":280},{"end":382,"score":0.0,"start":360},{"end":447,"score":0.0,"start":431}],"model":"PR00475","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00378","interpro_id":"IPR019807","interpro_name":"Hexokinase, binding site","interpro_type":"Binding_site","locations":[{"end":164,"score":0.0,"start":139}],"model":"PS00378","name":"Hexokinase domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51748","interpro_id":"IPR001312","interpro_name":"Hexokinase","interpro_type":"Family","locations":[{"end":446,"score":0.0,"start":3}],"model":"PS51748","name":"Hexokinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR19443","interpro_id":"IPR001312","interpro_name":"Hexokinase","interpro_type":"Family","locations":[{"end":451,"score":0.0,"start":6}],"model":"PTHR19443:SF30","name":"HEXOKINASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53067","interpro_id":"IPR043129","interpro_name":"ATPase, nucleotide binding domain","interpro_type":"Homologous_superfamily","locations":[{"end":209,"score":0.0,"start":4},{"end":452,"score":0.0,"start":214}],"model":"0047359","name":"Actin-like ATPase domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00012","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":229,"score":3.548369931216655e-10,"start":65}],"model":"cd00012","name":"Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily"}],"location":{"chromosome_name":"supercont5.3","end_pos":765639,"start_pos":764275,"strand":"forward"},"low_complexity_region_coords":[[448,453]],"name":"hxk2","ortholog_annotations":[{"gene_uniquename":"SJAG_04495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4195","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4922","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4923","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4925","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":4932,"ortholog_uniquename":"YCL040W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04495","ortholog_taxonid":4932,"ortholog_uniquename":"YDR516C","reference_uniquename":"PMID:29761456"}],"product":"hexokinase 2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016301","GO:0006091","GO:0005634","GO:0005829","GO:0055086","GO:0005739","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001678":null,"GO:0004340":null,"GO:0005524":null,"GO:0005536":null,"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0008865":null,"GO:0019158":null,"GO:0019660":null,"GO:0051156":null,"GO:0061621":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04495.1"],"transcripts_by_uniquename":{"SJAG_04495.1":null},"uniprot_identifier":"B6K6Z4","uniquename":"SJAG_04495"}


id: SJAG_04496
data:
  {"coiled_coil_coords":[[458,478]],"cv_annotations":{"biological_process":[{"annotations":[94146],"is_not":false,"summary":null,"term":"GO:0016239"},{"annotations":[94147],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[94143],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94144],"is_not":false,"summary":null,"term":"GO:0061700"},{"annotations":[94145],"is_not":false,"summary":null,"term":"GO:0005774"}]},"dbxrefs":["InterPro:IPR019775","InterPro:IPR036322","InterPro:IPR037590","UniProtKB/TrEMBL:B6K6Z5","GOA:B6K6Z5","EnsemblGenomes-Gn:SJAG_04496","InterPro:IPR001841","EnsemblGenomes-Tr:EEB09299","InterPro:IPR017986","InterPro:IPR015943","InterPro:IPR001680"],"deletion_viability":"unknown","disordered_region_coords":[[16,23],[238,246],[251,251],[311,313],[373,387],[428,433],[502,501],[515,529],[531,539],[547,549],[565,573],[479,478],[481,486]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"},{"name":"sdo1","uniquename":"SJAG_04491"}],"genes_by_uniquename":{"HGNC:20852":null,"SJAG_04496":null,"SPAC4F8.11":null,"YOL138C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":214,"score":2.999999960016831e-24,"start":2},{"end":312,"score":1.6000000186977559e-6,"start":223}],"model":"5teeA02","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF17120","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":791,"score":4.5000000170603016e-8,"start":740}],"model":"PF17120","name":"RING/Ubox like zinc-binding domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":174,"score":0.0,"start":132}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":784,"score":0.0,"start":742}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46200","interpro_id":"IPR037590","interpro_name":"GATOR complex protein WDR24","interpro_type":"Family","locations":[{"end":230,"score":0.0,"start":5}],"model":"PTHR46200:SF1","name":"GATOR COMPLEX PROTEIN WDR24"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":122,"score":32.0,"start":80},{"end":165,"score":0.0003499999875202775,"start":125},{"end":208,"score":0.04100000113248825,"start":168},{"end":268,"score":96.0,"start":212}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":311,"score":7.750000024575846e-30,"start":43}],"model":"0046612","name":"WD40 repeat-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":762567,"start_pos":760092,"strand":"reverse"},"low_complexity_region_coords":[[237,250],[388,409],[479,480],[487,501]],"name":"sea2","ortholog_annotations":[{"gene_uniquename":"SJAG_04496","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20852","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04496","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04496","ortholog_taxonid":4932,"ortholog_uniquename":"YOL138C","reference_uniquename":"PMID:29761456"}],"product":"GATOR2-SEACAT complex WD repeat subunit Sea2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005773","GO:0005829","GO:0006914","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005774":null,"GO:0005829":null,"GO:0016239":null,"GO:0061700":null,"GO:1904263":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04496.1"],"transcripts_by_uniquename":{"SJAG_04496.1":null},"uniprot_identifier":"B6K6Z5","uniquename":"SJAG_04496"}


id: SJAG_04497
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94154],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[94155],"is_not":false,"summary":null,"term":"GO:0000398"},{"annotations":[94156],"is_not":false,"summary":null,"term":"GO:0000393"},{"annotations":[94157],"is_not":false,"summary":null,"term":"GO:0000244"}],"cellular_component":[{"annotations":[94148],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[94149],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[94150],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[94151],"is_not":false,"summary":null,"term":"GO:0005681"},{"annotations":[94152],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[94153],"is_not":false,"summary":null,"term":"GO:0005682"}],"molecular_function":[{"annotations":[94158],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[94159],"is_not":false,"summary":null,"term":"GO:0008237"},{"annotations":[94160],"is_not":false,"summary":null,"term":"GO:0097157"},{"annotations":[94161],"is_not":false,"summary":null,"term":"GO:0030619"},{"annotations":[94162],"is_not":false,"summary":null,"term":"GO:0030620"},{"annotations":[94163],"is_not":false,"summary":null,"term":"GO:0030623"},{"annotations":[94164],"is_not":false,"summary":null,"term":"GO:0017070"}]},"dbxrefs":["InterPro:IPR027652","InterPro:IPR019581","InterPro:IPR019582","InterPro:IPR000555","InterPro:IPR012591","EnsemblGenomes-Gn:SJAG_04497","EnsemblGenomes-Tr:EEB09300","InterPro:IPR021983","InterPro:IPR012337","UniProtKB/TrEMBL:B6K6Z6","InterPro:IPR037518","InterPro:IPR012984","InterPro:IPR019580","GOA:B6K6Z6","InterPro:IPR012592","InterPro:IPR042516"],"deletion_viability":"unknown","disordered_region_coords":[[29,47],[49,52],[59,60],[65,76],[98,101],[438,439],[1093,1095],[1133,1134],[1144,1147],[2054,2061],[2070,2072],[2075,2077],[2346,2347],[2354,2355],[2357,2359],[1,4]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"},{"name":"rpf1","uniquename":"SJAG_04492"}],"genes_by_uniquename":{"HGNC:17340":null,"SJAG_04497":null,"SPAC4F8.12c":null,"YHR165C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.80.40","interpro_id":"IPR043173","interpro_name":"Prp8 RNase domain IV, fingers region","interpro_type":"Homologous_superfamily","locations":[{"end":2042,"score":0.0,"start":1944}],"model":"3sbtA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.230","interpro_id":"IPR043172","interpro_name":"Prp8 RNase domain IV, palm region","interpro_type":"Homologous_superfamily","locations":[{"end":1943,"score":0.0,"start":1783}],"model":"3sbtA01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.43.40","interpro_id":"IPR042516","interpro_name":"Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1325,"score":0.0,"start":1207}],"model":"4i43B02","name":"Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.140.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":2361,"score":0.0,"start":2080}],"model":"4kitC00","name":"Cytidine Deaminase, domain 2"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1570.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1774,"score":0.0,"start":1603}],"model":"4i43B04","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01398","interpro_id":"IPR000555","interpro_name":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_type":"Domain","locations":[{"end":2230,"score":0.00008099999831756577,"start":2128}],"model":"PF01398","name":"JAB1/Mov34/MPN/PAD-1 ubiquitin protease"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08082","interpro_id":"IPR012591","interpro_name":"PRO8NT domain","interpro_type":"Domain","locations":[{"end":227,"score":0.0,"start":77}],"model":"PF08082","name":"PRO8NT (NUC069), PrP8 N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08083","interpro_id":"IPR012592","interpro_name":"PROCN domain","interpro_type":"Domain","locations":[{"end":822,"score":0.0,"start":417}],"model":"PF08083","name":"PROCN (NUC071) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08084","interpro_id":"IPR012984","interpro_name":"PROCT domain","interpro_type":"Domain","locations":[{"end":2358,"score":2.802596928649634e-45,"start":2237}],"model":"PF08084","name":"PROCT (NUC072) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10596","interpro_id":"IPR019580","interpro_name":"Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding","interpro_type":"Domain","locations":[{"end":1622,"score":0.0,"start":1464}],"model":"PF10596","name":"U6-snRNA interacting domain of PrP8"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10597","interpro_id":"IPR019581","interpro_name":"Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding","interpro_type":"Domain","locations":[{"end":1365,"score":0.0,"start":1232}],"model":"PF10597","name":"U5-snRNA binding site 2 of PrP8"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10598","interpro_id":"IPR019582","interpro_name":"RNA recognition motif, spliceosomal PrP8","interpro_type":"Domain","locations":[{"end":1097,"score":5.605193857299268e-45,"start":1007}],"model":"PF10598","name":"RNA recognition motif of the spliceosomal PrP8"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12134","interpro_id":"IPR021983","interpro_name":"PRP8 domain IV core","interpro_type":"Domain","locations":[{"end":2010,"score":0.0,"start":1782}],"model":"PF12134","name":"PRP8 domain IV core"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50249","interpro_id":"IPR037518","interpro_name":"MPN domain","interpro_type":"Domain","locations":[{"end":2259,"score":0.0,"start":2126}],"model":"PS50249","name":"MPN domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11140","interpro_id":"IPR027652","interpro_name":"Pre-mRNA-processing-splicing factor 8","interpro_type":"Family","locations":[{"end":2350,"score":0.0,"start":41}],"model":"PTHR11140:SF0","name":"PRE-MRNA SPLICING FACTOR PRP8"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00232","interpro_id":"IPR000555","interpro_name":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_type":"Domain","locations":[{"end":2258,"score":1.2999999839887283e-22,"start":2122}],"model":"SM00232","name":"JAB/MPN domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53098","interpro_id":"IPR012337","interpro_name":"Ribonuclease H-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1275,"score":0.0,"start":1018},{"end":2036,"score":0.0,"start":1785}],"model":"0054948","name":"Ribonuclease H-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd08056","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":2343,"score":0.0,"start":2089}],"model":"cd08056","name":"Mpr1p, Pad1p N-terminal (MPN) domains without isopeptidase activity found in splicing factor Prp8"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13838","interpro_id":"IPR021983","interpro_name":"PRP8 domain IV core","interpro_type":"Domain","locations":[{"end":2038,"score":0.0,"start":1788}],"model":"cd13838","name":"Ribonuclease-like Prp8 domain IV core"}],"location":{"chromosome_name":"supercont5.3","end_pos":759903,"start_pos":752818,"strand":"forward"},"low_complexity_region_coords":[[5,28],[96,107],[185,195],[391,413],[1010,1026],[2062,2069]],"name":"spp42","ortholog_annotations":[{"gene_uniquename":"SJAG_04497","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17340","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04497","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04497","ortholog_taxonid":4932,"ortholog_uniquename":"YHR165C","reference_uniquename":"PMID:29761456"}],"product":"U5 snRNP complex subunit Spp42","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0008233","GO:0065003","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000244":null,"GO:0000393":null,"GO:0000398":null,"GO:0000974":null,"GO:0004843":null,"GO:0005681":null,"GO:0005682":null,"GO:0008237":null,"GO:0017070":null,"GO:0030619":null,"GO:0030620":null,"GO:0030623":null,"GO:0045292":null,"GO:0046540":null,"GO:0071013":null,"GO:0071014":null,"GO:0097157":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04497.1"],"transcripts_by_uniquename":{"SJAG_04497.1":null},"uniprot_identifier":"B6K6Z6","uniquename":"SJAG_04497"}


id: SJAG_04498
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"}},"coiled_coil_coords":[[1366,1407]],"cv_annotations":{"biological_process":[{"annotations":[94170],"is_not":false,"summary":null,"term":"GO:0071520"},{"annotations":[94171],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[94172],"is_not":false,"summary":null,"term":"GO:1903479"},{"annotations":[94173],"is_not":false,"summary":null,"term":"GO:1902404"}],"cellular_component":[{"annotations":[115319],"is_not":false,"summary":null,"term":"GO:0005826"},{"annotations":[94165],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[115220],"is_not":false,"summary":null,"term":"GO:1990753"},{"annotations":[94166],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[94167,115221],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[94168],"is_not":false,"summary":null,"term":"GO:0120104"},{"annotations":[94169],"is_not":false,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[76249],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[76245],"is_not":false,"summary":null,"term":"GO:0005516"},{"annotations":[94174],"is_not":false,"summary":null,"term":"GO:0008093"},{"annotations":[94175],"is_not":false,"summary":null,"term":"GO:0005096"}]},"dbxrefs":["InterPro:IPR000593","InterPro:IPR001715","EnsemblGenomes-Gn:SJAG_04498","GOA:B6K6Z7","EnsemblGenomes-Tr:EEB09301","InterPro:IPR036872","InterPro:IPR008936","InterPro:IPR001936","UniProtKB/TrEMBL:B6K6Z7","InterPro:IPR000048"],"deletion_viability":"unknown","disordered_region_coords":[[4,14],[16,19],[23,29],[37,38],[42,45],[52,55],[225,226],[228,249],[255,259],[269,270],[306,307],[321,324],[330,340],[1211,1212],[1363,1364]],"feature_publications":[{"reference_uniquename":"PMID:28655757","source":"canto"},{"reference_uniquename":"PMID:25866389","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"},{"name":"mrpl28","uniquename":"SJAG_04493"}],"genes_by_uniquename":{"HGNC:6110":null,"HGNC:6111":null,"SJAG_01143":null,"SJAG_04498":null,"SPAC4F8.13c":null,"YPL242C":null},"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.418.10","interpro_id":"IPR036872","interpro_name":"CH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":209,"score":0.0,"start":55}],"model":"5l0oA00","name":"Calponin-like domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.506.10","interpro_id":"IPR008936","interpro_name":"Rho GTPase activation protein","interpro_type":"Homologous_superfamily","locations":[{"end":1225,"score":0.0,"start":846}],"model":"3fayA00","name":"GTPase Activation - p120gap; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00307","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":174,"score":1.999999967550318e-17,"start":76}],"model":"PF00307","name":"Calponin homology (CH) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00616","interpro_id":"IPR001936","interpro_name":"Ras GTPase-activating domain","interpro_type":"Domain","locations":[{"end":1119,"score":8.899999807229646e-33,"start":918}],"model":"PF00616","name":"GTPase-activator protein for Ras-like GTPase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03836","interpro_id":"IPR000593","interpro_name":"RasGAP protein, C-terminal","interpro_type":"Domain","locations":[{"end":1452,"score":9.80908925027372e-45,"start":1316}],"model":"PF03836","name":"RasGAP C-terminus"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50018","interpro_id":"IPR001936","interpro_name":"Ras GTPase-activating domain","interpro_type":"Domain","locations":[{"end":1119,"score":0.0,"start":895}],"model":"PS50018","name":"Ras GTPase-activating proteins profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50021","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":177,"score":0.0,"start":71}],"model":"PS50021","name":"Calponin homology (CH) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50096","interpro_id":"IPR000048","interpro_name":"IQ motif, EF-hand binding site","interpro_type":"Binding_site","locations":[{"end":429,"score":0.0,"start":400},{"end":459,"score":0.0,"start":434},{"end":488,"score":0.0,"start":461},{"end":548,"score":0.0,"start":519},{"end":575,"score":0.0,"start":546},{"end":635,"score":0.0,"start":606},{"end":725,"score":0.0,"start":696}],"model":"PS50096","name":"IQ motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14149","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1529,"score":0.0,"start":633}],"model":"PTHR14149:SF14","name":"RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00015","interpro_id":"IPR000048","interpro_name":"IQ motif, EF-hand binding site","interpro_type":"Binding_site","locations":[{"end":421,"score":5.900000095367432,"start":399},{"end":451,"score":100.0,"start":429},{"end":480,"score":45.0,"start":458},{"end":510,"score":34.0,"start":488},{"end":567,"score":230.0,"start":545},{"end":627,"score":29.0,"start":605},{"end":717,"score":13.0,"start":695}],"model":"SM00015","name":"Short calmodulin-binding motif containing conserved Ile and Gln residues."},{"dbname":"SMART","evidence":"Smart scan","id":"SM00033","interpro_id":"IPR001715","interpro_name":"Calponin homology domain","interpro_type":"Domain","locations":[{"end":173,"score":2.100000023830477e-18,"start":73}],"model":"SM00033","name":"Calponin homology domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00323","interpro_id":"IPR001936","interpro_name":"Ras GTPase-activating domain","interpro_type":"Domain","locations":[{"end":1210,"score":0.00015999999595806003,"start":886}],"model":"SM00323","name":"GTPase-activator protein for Ras-like GTPases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF143885","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1529,"score":1.2799999997695472e-21,"start":1433}],"model":"0050767","name":"RGC domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47576","interpro_id":"IPR036872","interpro_name":"CH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":217,"score":1.699999244980295e-40,"start":63}],"model":"0048700","name":"Calponin-homology domain, CH-domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48350","interpro_id":"IPR008936","interpro_name":"Rho GTPase activation protein","interpro_type":"Homologous_superfamily","locations":[{"end":1216,"score":3.340000494912059e-39,"start":857}],"model":"0041355","name":"GTPase activation domain, GAP"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12206","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1258,"score":0.0,"start":899}],"model":"cd12206","name":"Ras-GTPase Activating Domain of proteins related to IQGAPs"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21206","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":181,"score":0.0,"start":65}],"model":"cd21206","name":"calponin homology (CH) domain found in the IQ motif containing GTPase activating protein family"}],"location":{"chromosome_name":"supercont5.3","end_pos":752097,"start_pos":747505,"strand":"forward"},"low_complexity_region_coords":[[250,268],[271,309],[471,486],[768,777],[1357,1364],[1398,1415]],"name":"rng2","ortholog_annotations":[{"gene_uniquename":"SJAG_04498","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6110","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04498","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6111","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04498","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04498","ortholog_taxonid":4932,"ortholog_uniquename":"YPL242C","reference_uniquename":"PMID:29761456"}],"product":"IQGAP domain cytoskeleton scaffold protein Rng2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:25866389":null,"PMID:28655757":null,"PMID:29761456":null},"subset_termids":["GO:0030234","GO:0015629","GO:0060090","GO:0015630","GO:0070938","GO:0098772","GO:0003779","GO:0005816","GO:0005938","GO:0030036","GO:0000281"],"target_of_annotations":[{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_01143","genotype_uniquename":"mid1delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:25866389","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005516":null,"GO:0005737":null,"GO:0005826":null,"GO:0008093":null,"GO:0044732":null,"GO:0051015":null,"GO:0051329":null,"GO:0071341":null,"GO:0071520":null,"GO:0110085":null,"GO:0120104":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1990753":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04498.1"],"transcripts_by_uniquename":{"SJAG_04498.1":null},"uniprot_identifier":"B6K6Z7","uniquename":"SJAG_04498"}


id: SJAG_04499
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94179],"is_not":false,"summary":null,"term":"GO:0006084"},{"annotations":[94180],"is_not":false,"summary":null,"term":"GO:0006696"},{"annotations":[94181],"is_not":false,"summary":null,"term":"GO:0010142"}],"cellular_component":[{"annotations":[94176],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94177],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[94178],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[94182],"is_not":false,"summary":null,"term":"GO:0004421"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K6Z8","EnsemblGenomes-Tr:EEB09302","InterPro:IPR000590","InterPro:IPR010122","EnsemblGenomes-Gn:SJAG_04499","InterPro:IPR013746","GOA:B6K6Z8","InterPro:IPR016039","InterPro:IPR013528"],"deletion_viability":"unknown","disordered_region_coords":[[282,283],[285,287]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"},{"name":"mrps12a","uniquename":"SJAG_04494"}],"genes_by_uniquename":{"HGNC:5007":null,"HGNC:5008":null,"SJAG_04499":null,"SPAC4F8.14c":null,"YML126C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.47.10","interpro_id":"IPR016039","interpro_name":"Thiolase-like","interpro_type":"Homologous_superfamily","locations":[{"end":452,"score":0.0,"start":8}],"model":"2wyaA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01154","interpro_id":"IPR013528","interpro_name":"Hydroxymethylglutaryl-coenzyme A synthase, N-terminal","interpro_type":"Domain","locations":[{"end":179,"score":0.0,"start":10}],"model":"PF01154","name":"Hydroxymethylglutaryl-coenzyme A synthase N terminal"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08540","interpro_id":"IPR013746","interpro_name":"Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain","interpro_type":"Domain","locations":[{"end":451,"score":0.0,"start":180}],"model":"PF08540","name":"Hydroxymethylglutaryl-coenzyme A synthase C terminal"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01226","interpro_id":"IPR000590","interpro_name":"Hydroxymethylglutaryl-coenzyme A synthase, active site","interpro_type":"Active_site","locations":[{"end":125,"score":0.0,"start":110}],"model":"PS01226","name":"Hydroxymethylglutaryl-coenzyme A synthase active site"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43323","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":452,"score":0.0,"start":6}],"model":"PTHR43323:SF2","name":"3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53901","interpro_id":"IPR016039","interpro_name":"Thiolase-like","interpro_type":"Homologous_superfamily","locations":[{"end":177,"score":4.610000021289595e-34,"start":11},{"end":450,"score":0.0,"start":180}],"model":"0049717","name":"Thiolase-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01833","interpro_id":"IPR010122","interpro_name":"Hydroxymethylglutaryl-CoA synthase, eukaryotic","interpro_type":"Family","locations":[{"end":451,"score":0.0,"start":9}],"model":"TIGR01833","name":"hydroxymethylglutaryl-CoA synthase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00827","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":375,"score":0.0,"start":11}],"model":"cd00827","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":746294,"start_pos":744936,"strand":"forward"},"name":"hcs1","ortholog_annotations":[{"gene_uniquename":"SJAG_04499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5007","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5008","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04499","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04499","ortholog_taxonid":4932,"ortholog_uniquename":"YML126C","reference_uniquename":"PMID:29761456"}],"product":"3-hydroxy-3-methylglutaryl-CoA synthase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0006790","GO:0055086","GO:0016746","GO:0006629","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004421":null,"GO:0005634":null,"GO:0005783":null,"GO:0005829":null,"GO:0006084":null,"GO:0006696":null,"GO:0010142":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04499.1"],"transcripts_by_uniquename":{"SJAG_04499.1":null},"uniprot_identifier":"B6K6Z8","uniquename":"SJAG_04499"}


id: SJAG_04500
data:
  {"coiled_coil_coords":[[270,276]],"cv_annotations":{"biological_process":[{"annotations":[85019],"is_not":false,"summary":null,"term":"GO:0180035"},{"annotations":[85020],"is_not":false,"summary":null,"term":"GO:0071030"}],"cellular_component":[{"annotations":[85018],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04500","GOA:B6K6Z9","EnsemblGenomes-Tr:EEB09303","InterPro:IPR025066","UniProtKB/TrEMBL:B6K6Z9"],"deletion_viability":"unknown","disordered_region_coords":[[1,12],[30,31],[34,88],[95,96],[98,117],[133,134],[136,143]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"},{"name":"hxk2","uniquename":"SJAG_04495"}],"genes_by_uniquename":{"HGNC:28033":null,"SJAG_04500":null,"SPAC140.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13300","interpro_id":"IPR025066","interpro_name":"Coiled-coil domain-containing protein 174-like","interpro_type":"Family","locations":[{"end":268,"score":7.300000091455741e-20,"start":191}],"model":"PF13300","name":"Domain of unknown function (DUF4078)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15885","interpro_id":"IPR025066","interpro_name":"Coiled-coil domain-containing protein 174-like","interpro_type":"Family","locations":[{"end":278,"score":9.80908925027372e-45,"start":1}],"model":"PTHR15885:SF1","name":"UNCHARACTERIZED"}],"location":{"chromosome_name":"supercont5.3","end_pos":743815,"start_pos":742955,"strand":"forward"},"name":"ctr1","ortholog_annotations":[{"gene_uniquename":"SJAG_04500","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28033","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04500","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC140.04","reference_uniquename":"PMID:21511999"}],"product":"MTREC associated protein Ctr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0071030":null,"GO:0180035":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04500.1"],"transcripts_by_uniquename":{"SJAG_04500.1":null},"uniprot_identifier":"B6K6Z9","uniquename":"SJAG_04500"}


id: SJAG_04501
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[96106],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96107],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[96108],"is_not":false,"summary":null,"term":"GO:0016791"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09304","EnsemblGenomes-Gn:SJAG_04501","InterPro:IPR006439","InterPro:IPR023214","UniProtKB/TrEMBL:B6K700","GOA:B6K700","InterPro:IPR041492","InterPro:IPR036412","InterPro:IPR011949"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"},{"name":"sea2","uniquename":"SJAG_04496"}],"genes_by_uniquename":{"HGNC:28171":null,"SJAG_04501":null,"SPAC7D4.05":null,"YMR130W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.150.720","interpro_id":"IPR044924","interpro_name":"HAD-superfamily hydrolase, subfamily IA, REG-2-like, capping domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":97,"score":2.1019476964872256e-44,"start":20}],"model":"3k1zA02","name":"Haloacid dehalogenase-like hydrolase"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1000","interpro_id":"IPR023214","interpro_name":"HAD superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":211,"score":2.1019476964872256e-44,"start":6}],"model":"3k1zA01","name":"HAD superfamily/HAD-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13419","interpro_id":"IPR041492","interpro_name":"Haloacid dehalogenase-like hydrolase","interpro_type":"Family","locations":[{"end":207,"score":1.2999999965401798e-9,"start":8}],"model":"PF13419","name":"Haloacid dehalogenase-like hydrolase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46191","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":217,"score":0.0,"start":2}],"model":"PTHR46191:SF2","name":""},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDG01129","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":211,"score":3.400000008098314e-13,"start":4}],"model":"SFLDG01129","name":"C1.5: HAD, Beta-PGM, Phosphatase Like"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDS00003","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":211,"score":3.400000008098314e-13,"start":4}],"model":"SFLDS00003","name":"Haloacid Dehalogenase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56784","interpro_id":"IPR036412","interpro_name":"HAD-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":211,"score":2.2299999240157725e-26,"start":5}],"model":"0050797","name":"HAD-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01549","interpro_id":"IPR006439","interpro_name":"HAD hydrolase, subfamily IA","interpro_type":"Family","locations":[{"end":204,"score":0.000019999999494757503,"start":122}],"model":"TIGR01549","name":"HAD-IA family hydrolase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR02252","interpro_id":"IPR011949","interpro_name":"HAD-superfamily hydrolase, subfamily IA, REG-2-like","interpro_type":"Family","locations":[{"end":209,"score":0.0,"start":5}],"model":"TIGR02252","name":"HAD hydrolase, REG-2-like, family IA (Provisional)"}],"location":{"chromosome_name":"supercont5.3","end_pos":742509,"start_pos":741706,"strand":"forward"},"low_complexity_region_coords":[[131,141]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04501","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28171","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04501","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC7D4.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04501","ortholog_taxonid":4932,"ortholog_uniquename":"YMR130W","reference_uniquename":"PMID:29761456"}],"product":"HAD superfamily hydrolase, unknown role","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0016788","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016791":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04501.1"],"transcripts_by_uniquename":{"SJAG_04501.1":null},"uniprot_identifier":"B6K700","uniquename":"SJAG_04501"}


id: SJAG_04502
data:
  {"coiled_coil_coords":[[245,265],[479,499],[595,600],[664,724]],"cv_annotations":{"biological_process":[{"annotations":[96097],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[96098],"is_not":false,"summary":null,"term":"GO:0030242"},{"annotations":[96099],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[96100],"is_not":false,"summary":null,"term":"GO:0000423"},{"annotations":[96101],"is_not":false,"summary":null,"term":"GO:0034727"},{"annotations":[67984],"is_not":false,"summary":null,"term":"GO:1903599"},{"annotations":[96102],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[96103],"is_not":false,"summary":null,"term":"GO:0034517"}],"cellular_component":[{"annotations":[96091],"is_not":false,"summary":null,"term":"GO:1990316"},{"annotations":[96092],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[96093],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[96094],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[96095],"is_not":false,"summary":null,"term":"GO:0000407"},{"annotations":[96096],"is_not":false,"summary":null,"term":"GO:0034045"}],"molecular_function":[{"annotations":[96104],"is_not":false,"summary":null,"term":"GO:0060090"},{"annotations":[96105],"is_not":false,"summary":null,"term":"GO:0043539"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04502","GOA:B6K701","EnsemblGenomes-Tr:EEB09305","InterPro:IPR019460","InterPro:IPR040040","UniProtKB/TrEMBL:B6K701"],"deletion_viability":"unknown","disordered_region_coords":[[83,92],[133,136],[150,151],[239,240],[472,474],[476,477],[515,518],[542,545],[549,562],[605,606],[614,620],[629,641],[643,645],[699,720],[783,789]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"},{"name":"spp42","uniquename":"SJAG_04497"}],"genes_by_uniquename":{"HGNC:15574":null,"SJAG_04502":null,"SPAC7D4.04":null,"YPR049C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10377","interpro_id":"IPR019460","interpro_name":"Autophagy-related protein 11, C-terminal","interpro_type":"Domain","locations":[{"end":939,"score":5.499999946911262e-32,"start":830}],"model":"PF10377","name":"Autophagy-related protein 11"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19697","interpro_id":"IPR045593","interpro_name":"Atg11, middle domain","interpro_type":"Domain","locations":[{"end":591,"score":6.100000064179767e-6,"start":523}],"model":"PF19697","name":"Atg11 middle domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13222","interpro_id":"IPR040040","interpro_name":"Autophagy-related protein 11","interpro_type":"Family","locations":[{"end":435,"score":0.0,"start":245}],"model":"PTHR13222:SF1","name":"RB1-INDUCIBLE COILED-COIL"}],"location":{"chromosome_name":"supercont5.3","end_pos":741436,"start_pos":738605,"strand":"forward"},"name":"atg11","ortholog_annotations":[{"gene_uniquename":"SJAG_04502","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15574","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04502","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC7D4.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04502","ortholog_taxonid":4932,"ortholog_uniquename":"YPR049C","reference_uniquename":"PMID:29761456"}],"product":"autophagy associated protein kinase regulator Atg11","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0060090","GO:0098772","GO:0005634","GO:0007005","GO:0005773","GO:0000407","GO:0006914","GO:0030234"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000329":null,"GO:0000407":null,"GO:0000423":null,"GO:0005634":null,"GO:0005737":null,"GO:0016236":null,"GO:0030242":null,"GO:0034045":null,"GO:0034517":null,"GO:0034727":null,"GO:0043539":null,"GO:0060090":null,"GO:0061709":null,"GO:1903599":null,"GO:1990316":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04502.1"],"transcripts_by_uniquename":{"SJAG_04502.1":null},"uniprot_identifier":"B6K701","uniquename":"SJAG_04502"}


id: SJAG_04503
data:
  {"coiled_coil_coords":[[469,489]],"cv_annotations":{"biological_process":[{"annotations":[96089],"is_not":false,"summary":null,"term":"GO:0051403"}],"molecular_function":[{"annotations":[96090],"is_not":false,"summary":null,"term":"GO:0005078"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K702","EnsemblGenomes-Tr:EEB09306","EnsemblGenomes-Gn:SJAG_04503","InterPro:IPR013887"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[5,40],[43,45],[68,72],[116,121],[437,451],[456,457],[691,702],[767,768],[80,87]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"},{"name":"rng2","uniquename":"SJAG_04498"}],"genes_by_uniquename":{"SJAG_04503":null,"SPAC7D4.03c":null,"YDL073W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08578","interpro_id":"IPR013887","interpro_name":"Uncharacterised protein family UPF0592","interpro_type":"Family","locations":[{"end":621,"score":8.400000026637046e-29,"start":505}],"model":"PF08578","name":"Protein of unknown function (DUF1765)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR37988","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":884,"score":0.0,"start":94}],"model":"PTHR37988:SF1","name":"UPF0592 MEMBRANE PROTEIN C7D4.03C"}],"location":{"chromosome_name":"supercont5.3","end_pos":737600,"start_pos":734946,"strand":"reverse"},"low_complexity_region_coords":[[88,115],[122,133],[378,389],[717,725]],"name":"ahk1","ortholog_annotations":[{"gene_uniquename":"SJAG_04503","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC7D4.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04503","ortholog_taxonid":4932,"ortholog_uniquename":"YDL073W","reference_uniquename":"PMID:29761456"}],"product":"MAP kinase cascade scaffold protein Ahk1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0023052","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005078":null,"GO:0051403":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04503.1"],"transcripts_by_uniquename":{"SJAG_04503.1":null},"uniprot_identifier":"B6K702","uniquename":"SJAG_04503"}


id: SJAG_04505
data:
  {"coiled_coil_coords":[[173,193]],"cv_annotations":{"biological_process":[{"annotations":[96087],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[96084],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[96085],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96086],"is_not":false,"summary":null,"term":"GO:0005768"}],"molecular_function":[{"annotations":[96088],"is_not":false,"summary":null,"term":"GO:0030414"}]},"dbxrefs":["InterPro:IPR001452","InterPro:IPR036028","UniProtKB/TrEMBL:B6K703","EnsemblGenomes-Tr:EEB09307","InterPro:IPR027267","EnsemblGenomes-Gn:SJAG_04505"],"deletion_viability":"unknown","disordered_region_coords":[[115,172],[326,366],[194,316]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"},{"name":"hcs1","uniquename":"SJAG_04499"}],"genes_by_uniquename":{"HGNC:17650":null,"HGNC:24699":null,"HGNC:26299":null,"SJAG_04505":null,"SPAC7D4.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1270.60","interpro_id":"IPR027267","interpro_name":"AH/BAR domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":128,"score":6.000000212225132e-7,"start":1}],"model":"3i2wA01","name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":431,"score":1.2000000136174153e-17,"start":361}],"model":"4glmA00","name":"SH3 Domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00018","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":424,"score":2.6000000763470865e-11,"start":375}],"model":"PF00018","name":"SH3 domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00452","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":382,"score":2.900000026784255e-7,"start":372},{"end":401,"score":2.900000026784255e-7,"start":386},{"end":412,"score":2.900000026784255e-7,"start":403},{"end":430,"score":2.900000026784255e-7,"start":418}],"model":"PR00452","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50002","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":432,"score":0.0,"start":369}],"model":"PS50002","name":"Src homology 3 (SH3) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23065","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":428,"score":1.8000000101547897e-10,"start":147}],"model":"PTHR23065:SF7","name":"PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00326","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":431,"score":4.200000047660954e-18,"start":372}],"model":"SM00326","name":"Src homology 3 domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103657","interpro_id":"IPR027267","interpro_name":"AH/BAR domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":82,"score":0.00009419999696547166,"start":4}],"model":"0053884","name":"BAR/IMD domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50044","interpro_id":"IPR036028","interpro_name":"SH3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":431,"score":4.0699999290018136e-18,"start":351}],"model":"0043854","name":"SH3-domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00174","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":426,"score":2.929110023581756e-15,"start":373}],"model":"cd00174","name":"Src Homology 3 domain superfamily"}],"location":{"chromosome_name":"supercont5.3","end_pos":733872,"start_pos":732571,"strand":"reverse"},"low_complexity_region_coords":[[317,325]],"name":"sfp47","ortholog_annotations":[{"gene_uniquename":"SJAG_04505","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17650","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04505","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24699","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04505","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26299","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04505","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC7D4.02c","reference_uniquename":"PMID:21511999"}],"product":"Ubp4 interactor Sfp47","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005768","GO:0030163","GO:0030234","GO:0098772","GO:0031410","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005768":null,"GO:0005829":null,"GO:0006511":null,"GO:0030414":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04505.1"],"transcripts_by_uniquename":{"SJAG_04505.1":null},"uniprot_identifier":"B6K703","uniquename":"SJAG_04505"}


id: SJAG_04506
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94186],"is_not":false,"summary":null,"term":"GO:1904679"}],"cellular_component":[{"annotations":[94183],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[94184],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[94185],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[94187],"is_not":false,"summary":null,"term":"GO:0005366"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09308","EnsemblGenomes-Gn:SJAG_04506","UniProtKB/TrEMBL:B6K704","InterPro:IPR003663","GOA:B6K704","InterPro:IPR005828","InterPro:IPR005829","InterPro:IPR020846","InterPro:IPR036259"],"deletion_viability":"unknown","disordered_region_coords":[[63,65],[581,580],[563,567]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"},{"name":"ctr1","uniquename":"SJAG_04500"}],"genes_by_uniquename":{"HGNC:17018":null,"HGNC:19714":null,"HGNC:29106":null,"SJAG_04506":null,"SPAC4F8.15":null,"YDR387C":null,"YDR497C":null,"YOL103W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1250.20","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":548,"score":0.0,"start":82}],"model":"4zw9A00","name":"MFS general substrate transporter like domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00083","interpro_id":"IPR005828","interpro_name":"Major facilitator, sugar transporter-like","interpro_type":"Family","locations":[{"end":545,"score":0.0,"start":94}],"model":"PF00083","name":"Sugar (and other) transporter"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00171","interpro_id":"IPR003663","interpro_name":"Sugar/inositol transporter","interpro_type":"Family","locations":[{"end":111,"score":3.49999988350591e-26,"start":101},{"end":205,"score":3.49999988350591e-26,"start":186},{"end":361,"score":3.49999988350591e-26,"start":351},{"end":469,"score":3.49999988350591e-26,"start":448},{"end":482,"score":3.49999988350591e-26,"start":470}],"model":"PR00171","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00216","interpro_id":"IPR005829","interpro_name":"Sugar transporter, conserved site","interpro_type":"Conserved_site","locations":[{"end":166,"score":0.0,"start":149},{"end":409,"score":0.0,"start":393}],"model":"PS00216","name":"Sugar transport proteins signature 1"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50850","interpro_id":"IPR020846","interpro_name":"Major facilitator superfamily domain","interpro_type":"Domain","locations":[{"end":535,"score":0.0,"start":93}],"model":"PS50850","name":"Major facilitator superfamily (MFS) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48020","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":571,"score":0.0,"start":68}],"model":"PTHR48020:SF12","name":"PROTON MYO-INOSITOL COTRANSPORTER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103473","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":542,"score":0.0,"start":77}],"model":"0042501","name":"MFS general substrate transporter"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00879","interpro_id":"IPR003663","interpro_name":"Sugar/inositol transporter","interpro_type":"Family","locations":[{"end":542,"score":0.0,"start":84}],"model":"TIGR00879","name":"sugar porter family MFS transporter"}],"location":{"chromosome_name":"supercont5.3","end_pos":731763,"start_pos":730021,"strand":"forward"},"low_complexity_region_coords":[[161,175],[399,407],[568,580]],"name":"itr1","ortholog_annotations":[{"gene_uniquename":"SJAG_04506","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17018","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19714","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29106","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F8.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":4932,"ortholog_uniquename":"YDR387C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":4932,"ortholog_uniquename":"YDR497C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04506","ortholog_taxonid":4932,"ortholog_uniquename":"YOL103W","reference_uniquename":"PMID:29761456"}],"product":"myo-inositol transmembrane transporter Itr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0005773","GO:0005886","GO:0055085","GO:0022857"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005366":null,"GO:0005794":null,"GO:0005886":null,"GO:1904679":null},"tm_domain_coords":[[89,111],[134,153],[160,182],[186,208],[215,237],[247,269],[338,360],[375,397],[404,426],[441,463],[480,502],[507,529]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04506.1"],"transcripts_by_uniquename":{"SJAG_04506.1":null},"uniprot_identifier":"B6K704","uniquename":"SJAG_04506"}


id: SJAG_04507
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76382],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[76383],"is_not":false,"summary":null,"term":"GO:0000226"}],"cellular_component":[{"annotations":[84059],"is_not":false,"summary":null,"term":"GO:0005938"}],"molecular_function":[{"annotations":[84060],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[84061],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR008271","InterPro:IPR011009","EnsemblGenomes-Gn:SJAG_04507","EnsemblGenomes-Tr:EEB09309","UniProtKB/TrEMBL:B6K705","GOA:B6K705","InterPro:IPR000719","InterPro:IPR017441"],"deletion_viability":"unknown","disordered_region_coords":[[1,40],[77,129],[131,132],[143,206],[209,210],[240,241],[268,280],[283,295],[301,307],[314,315],[320,321],[333,340],[655,669],[672,674],[684,686],[719,720],[723,724],[726,728],[736,751],[753,755],[775,775],[777,781],[809,817],[821,822],[56,64],[757,767]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"},{"uniquename":"SJAG_04501"}],"genes_by_uniquename":{"SJAG_04507":null,"SPAC110.01":null,"YOR233W":null,"YPL141C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":691,"score":0.0,"start":348}],"model":"4bkyA00","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":638,"score":0.0,"start":355}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":392,"score":0.0,"start":361}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":494,"score":0.0,"start":482}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":638,"score":0.0,"start":355}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24346","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":680,"score":0.0,"start":240}],"model":"PTHR24346:SF76","name":"MAP/MICROTUBULE AFFINITY-REGULATING KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":638,"score":0.0,"start":355}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":692,"score":0.0,"start":351}],"model":"0041927","name":"Protein kinase-like (PK-like)"}],"location":{"chromosome_name":"supercont5.3","end_pos":727743,"start_pos":725209,"strand":"reverse"},"low_complexity_region_coords":[[65,76],[212,239],[314,325],[768,774]],"name":"ppk1","ortholog_annotations":[{"gene_uniquename":"SJAG_04507","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC110.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04507","ortholog_taxonid":4932,"ortholog_uniquename":"YOR233W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04507","ortholog_taxonid":4932,"ortholog_uniquename":"YPL141C","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase Ppk1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0004672","GO:0023052","GO:0000226","GO:0016301","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000226":null,"GO:0004674":null,"GO:0005524":null,"GO:0005938":null,"GO:0035556":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04507.1"],"transcripts_by_uniquename":{"SJAG_04507.1":null},"uniprot_identifier":"B6K705","uniquename":"SJAG_04507"}


id: SJAG_04508
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84068],"is_not":false,"summary":null,"term":"GO:0051456"},{"annotations":[84069],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[84070],"is_not":false,"summary":null,"term":"GO:0007064"}],"cellular_component":[{"annotations":[84062],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[84063],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[84064],"is_not":false,"summary":null,"term":"GO:0000228"},{"annotations":[84065],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[84066],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[84067],"is_not":false,"summary":null,"term":"GO:0090695"}],"molecular_function":[{"annotations":[84071],"is_not":false,"summary":null,"term":"GO:0003677"}]},"dbxrefs":["InterPro:IPR011989","GOA:B6K706","InterPro:IPR039776","EnsemblGenomes-Tr:EEB09310","EnsemblGenomes-Gn:SJAG_04508","InterPro:IPR016024","UniProtKB/TrEMBL:B6K706"],"deletion_viability":"unknown","disordered_region_coords":[[1109,1110],[1117,1118],[1214,1213],[1120,1130],[1153,1185]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"},{"name":"atg11","uniquename":"SJAG_04502"}],"genes_by_uniquename":{"HGNC:20418":null,"HGNC:29088":null,"SJAG_04508":null,"SPAC110.02":null,"YMR076C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":560,"score":8.699999748396081e-11,"start":14}],"model":"1b3uA00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20168","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1081,"score":0.0,"start":27}],"model":"PF20168","name":"Sister chromatid cohesion protein PDS5 protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12663","interpro_id":"IPR039776","interpro_name":"Sister chromatid cohesion protein Pds5","interpro_type":"Family","locations":[{"end":1189,"score":0.0,"start":658}],"model":"PTHR12663:SF0","name":"ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":931,"score":1.7700000296580414e-23,"start":64}],"model":"0045874","name":"ARM repeat"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19953","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":663,"score":0.0,"start":40}],"model":"cd19953","name":"Sister chromatid cohesion protein PDS5"}],"location":{"chromosome_name":"supercont5.3","end_pos":724199,"start_pos":720516,"strand":"reverse"},"low_complexity_region_coords":[[29,40],[1131,1152],[1186,1213]],"name":"pds5","ortholog_annotations":[{"gene_uniquename":"SJAG_04508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20418","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29088","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04508","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC110.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04508","ortholog_taxonid":4932,"ortholog_uniquename":"YMR076C","reference_uniquename":"PMID:29761456"}],"product":"mitotic and meiotic cohesin loader subunit Pds5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140013","GO:0005694","GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000228":null,"GO:0003677":null,"GO:0005634":null,"GO:0005721":null,"GO:0006281":null,"GO:0007064":null,"GO:0031934":null,"GO:0051456":null,"GO:0090695":null,"GO:0099115":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04508.1"],"transcripts_by_uniquename":{"SJAG_04508.1":null},"uniprot_identifier":"B6K706","uniquename":"SJAG_04508"}


id: SJAG_04509
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84089],"is_not":false,"summary":null,"term":"GO:0042815"},{"annotations":[84090],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[84091],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[84092],"is_not":false,"summary":null,"term":"GO:0101026"},{"annotations":[84093],"is_not":false,"summary":null,"term":"GO:1902917"},{"annotations":[84094],"is_not":false,"summary":null,"term":"GO:0032951"},{"annotations":[84095],"is_not":false,"summary":null,"term":"GO:0032955"},{"annotations":[84096],"is_not":false,"summary":null,"term":"GO:2001135"},{"annotations":[84097],"is_not":false,"summary":null,"term":"GO:0032878"},{"annotations":[84098],"is_not":false,"summary":null,"term":"GO:2000769"},{"annotations":[84099],"is_not":false,"summary":null,"term":"GO:0017157"},{"annotations":[84100],"is_not":false,"summary":null,"term":"GO:0033157"},{"annotations":[84101],"is_not":false,"summary":null,"term":"GO:0060627"},{"annotations":[84102],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[84072],"is_not":false,"summary":null,"term":"GO:0071521"},{"annotations":[84073],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[84074],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[84075],"is_not":false,"summary":null,"term":"GO:1902716"},{"annotations":[84076],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[84077],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[84078],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[84079],"is_not":false,"summary":null,"term":"GO:0090726"},{"annotations":[84080],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[84081],"is_not":false,"summary":null,"term":"GO:0012505"},{"annotations":[84082],"is_not":false,"summary":null,"term":"GO:0070382"},{"annotations":[84083],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[84084],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[84085],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[84086],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[84087],"is_not":false,"summary":null,"term":"GO:0031520"},{"annotations":[84088],"is_not":false,"summary":null,"term":"GO:0030427"}],"molecular_function":[{"annotations":[68454],"is_not":false,"summary":null,"term":"GO:0003925"},{"annotations":[84103],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[84104],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[84105],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[84106],"is_not":false,"summary":null,"term":"GO:0035591"}]},"dbxrefs":["GOA:B6K707","InterPro:IPR001806","EnsemblGenomes-Tr:EEB09311","InterPro:IPR003578","InterPro:IPR037874","UniProtKB/TrEMBL:B6K707","InterPro:IPR005225","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_04509"],"deletion_viability":"unknown","disordered_region_coords":[[124,125],[128,137],[139,142]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"},{"name":"ahk1","uniquename":"SJAG_04503"}],"genes_by_uniquename":{"HGNC:1736":null,"SJAG_04509":null,"SPAC110.03":null,"YLR229C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":192,"score":0.0,"start":1}],"model":"2ngrA00","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00071","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":175,"score":0.0,"start":5}],"model":"PF00071","name":"Ras family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00449","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":25,"score":1.5000000047566153e-29,"start":4},{"end":43,"score":1.5000000047566153e-29,"start":27},{"end":66,"score":1.5000000047566153e-29,"start":44},{"end":119,"score":1.5000000047566153e-29,"start":106},{"end":176,"score":1.5000000047566153e-29,"start":154}],"model":"PR00449","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51419","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":192,"score":0.0,"start":1}],"model":"PS51419","name":"small GTPase Rab1 family profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51420","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":176,"score":0.0,"start":1}],"model":"PS51420","name":"small GTPase Rho family profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51421","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":192,"score":0.0,"start":1}],"model":"PS51421","name":"small GTPase Ras family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24072","interpro_id":"IPR003578","interpro_name":"Small GTPase Rho","interpro_type":"Family","locations":[{"end":186,"score":0.0,"start":4}],"model":"PTHR24072:SF192","name":"RHO FAMILY GTPASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00173","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":179,"score":6.19999993249321e-17,"start":1}],"model":"SM00173","name":"Ras subfamily of RAS small GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00174","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":179,"score":0.0,"start":6}],"model":"SM00174","name":"Rho (Ras homology) subfamily of Ras-like small GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00175","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":179,"score":1.0999999722265076e-15,"start":4}],"model":"SM00175","name":"Rab subfamily of small GTPases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":173,"score":0.0,"start":3}],"model":"0053591","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00231","interpro_id":"IPR005225","interpro_name":"Small GTP-binding protein domain","interpro_type":"Domain","locations":[{"end":157,"score":7.099999566850016e-39,"start":2}],"model":"TIGR00231","name":"small GTP-binding protein domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01874","interpro_id":"IPR037874","interpro_name":"Cdc42","interpro_type":"Family","locations":[{"end":177,"score":0.0,"start":3}],"model":"cd01874","name":"cell division cycle 42 (Cdc42) is a small GTPase of the Rho family"}],"location":{"chromosome_name":"supercont5.3","end_pos":720193,"start_pos":719330,"strand":"reverse"},"name":"cdc42","ortholog_annotations":[{"gene_uniquename":"SJAG_04509","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1736","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04509","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC110.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04509","ortholog_taxonid":4932,"ortholog_uniquename":"YLR229C","reference_uniquename":"PMID:29761456"}],"product":"Rho family GTPase Cdc42","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005975","GO:0030234","GO:0098772","GO:0031410","GO:0070938","GO:0016192","GO:0061024","GO:0060090","GO:0007163","GO:0003924","GO:0015629","GO:0023052","GO:0005938","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0003925":null,"GO:0005525":null,"GO:0005886":null,"GO:0005938":null,"GO:0006897":null,"GO:0009898":null,"GO:0012505":null,"GO:0017157":null,"GO:0023052":null,"GO:0030010":null,"GO:0030427":null,"GO:0031520":null,"GO:0032153":null,"GO:0032154":null,"GO:0032878":null,"GO:0032951":null,"GO:0032955":null,"GO:0033157":null,"GO:0035591":null,"GO:0042815":null,"GO:0043332":null,"GO:0043539":null,"GO:0051285":null,"GO:0051286":null,"GO:0060627":null,"GO:0070382":null,"GO:0071521":null,"GO:0090726":null,"GO:0097575":null,"GO:0101026":null,"GO:0110085":null,"GO:1902716":null,"GO:1902917":null,"GO:2000769":null,"GO:2001135":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04509.1"],"transcripts_by_uniquename":{"SJAG_04509.1":null},"uniprot_identifier":"B6K707","uniquename":"SJAG_04509"}


id: SJAG_04511
data:
  {"coiled_coil_coords":[[654,690]],"cv_annotations":{"biological_process":[{"annotations":[84109],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[84107],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[84108],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84110],"is_not":false,"summary":null,"term":"GO:0000774"},{"annotations":[84111],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[84112],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[84113],"is_not":false,"summary":null,"term":"GO:0140662"}]},"dbxrefs":["InterPro:IPR029047","GOA:B6K708","UniProtKB/TrEMBL:B6K708","InterPro:IPR029048","EnsemblGenomes-Gn:SJAG_04511","EnsemblGenomes-Tr:EEB09312","InterPro:IPR013126","InterPro:IPR018181"],"deletion_viability":"unknown","disordered_region_coords":[[198,199],[419,423],[505,527],[711,727],[654,653],[691,704]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"},{"name":"sfp47","uniquename":"SJAG_04505"}],"genes_by_uniquename":{"HGNC:16969":null,"HGNC:17041":null,"HGNC:5237":null,"SJAG_04511":null,"SPAC110.04c":null,"YBR169C":null,"YPL106C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1270.10","interpro_id":"IPR029048","interpro_name":"Heat shock protein 70kD, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":663,"score":1.7000006462787594e-39,"start":551}],"model":"3d2eA06","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.34.10","interpro_id":"IPR029047","interpro_name":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":550,"score":0.0,"start":392}],"model":"2qxlB05","name":"Substrate Binding Domain Of DNAk; Chain A, domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.30.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":117,"score":0.0,"start":42}],"model":"3d2fA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":379,"score":0.0,"start":9},{"end":365,"score":0.0,"start":190}],"model":"3d2fA01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.640.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":318,"score":0.0,"start":235}],"model":"3d2fA04","name":"Actin; Chain A, domain 4"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00012","interpro_id":"IPR013126","interpro_name":"Heat shock protein 70 family","interpro_type":"Family","locations":[{"end":652,"score":0.0,"start":7}],"model":"PF00012","name":"Hsp70 protein"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00301","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":19,"score":6.100000109342275e-23,"start":6},{"end":46,"score":6.100000109342275e-23,"start":34},{"end":64,"score":6.100000109342275e-23,"start":56},{"end":164,"score":6.100000109342275e-23,"start":144},{"end":353,"score":6.100000109342275e-23,"start":337},{"end":388,"score":6.100000109342275e-23,"start":368}],"model":"PR00301","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01036","interpro_id":"IPR018181","interpro_name":"Heat shock protein 70, conserved site","interpro_type":"Conserved_site","locations":[{"end":354,"score":0.0,"start":340}],"model":"PS01036","name":"Heat shock hsp70 proteins family signature 3"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45639","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":685,"score":0.0,"start":3}],"model":"PTHR45639:SF4","name":"HSC70CB, ISOFORM G-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF100920","interpro_id":"IPR029047","interpro_name":"Heat shock protein 70kD, peptide-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":584,"score":1.7700000821242336e-17,"start":389}],"model":"0036037","name":"Heat shock protein 70kD (HSP70), peptide-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF100934","interpro_id":"IPR029048","interpro_name":"Heat shock protein 70kD, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":651,"score":5.100000050357748e-25,"start":555}],"model":"0036477","name":"Heat shock protein 70kD (HSP70), C-terminal subdomain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53067","interpro_id":"IPR043129","interpro_name":"ATPase, nucleotide binding domain","interpro_type":"Homologous_superfamily","locations":[{"end":189,"score":0.0,"start":6},{"end":385,"score":0.0,"start":198}],"model":"0047192","name":"Actin-like ATPase domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd10228","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":386,"score":0.0,"start":7}],"model":"cd10228","name":"Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":717408,"start_pos":715225,"strand":"forward"},"low_complexity_region_coords":[[496,522],[528,539],[691,691],[705,710]],"name":"pss1","ortholog_annotations":[{"gene_uniquename":"SJAG_04511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16969","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17041","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04511","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5237","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04511","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC110.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04511","ortholog_taxonid":4932,"ortholog_uniquename":"YBR169C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04511","ortholog_taxonid":4932,"ortholog_uniquename":"YPL106C","reference_uniquename":"PMID:29761456"}],"product":"heat shock protein Pss1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0051604","GO:0006457","GO:0016887","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000774":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0016887":null,"GO:0042026":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04511.1"],"transcripts_by_uniquename":{"SJAG_04511.1":null},"uniprot_identifier":"B6K708","uniquename":"SJAG_04511"}


id: SJAG_04512
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97196],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[97197],"is_not":false,"summary":null,"term":"GO:0045892"}],"cellular_component":[{"annotations":[97194],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[97195],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[97198],"is_not":false,"summary":null,"term":"GO:0003682"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04512","EnsemblGenomes-Tr:EEB09313","InterPro:IPR000253","InterPro:IPR008984","GOA:B6K709","UniProtKB/TrEMBL:B6K709"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[4,5],[27,47],[59,66],[68,68],[83,84],[87,97],[99,105],[175,178],[211,231],[244,247],[296,298],[300,330],[341,380],[382,383],[388,399],[401,487],[511,512],[516,517],[530,531],[575,576],[579,583],[616,615],[7,16],[249,269],[596,597]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"},{"name":"itr1","uniquename":"SJAG_04506"}],"genes_by_uniquename":{"SJAG_04512":null,"SPAP14E8.02":null,"YDR501W":null,"YLR183C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50006","interpro_id":"IPR000253","interpro_name":"Forkhead-associated (FHA) domain","interpro_type":"Domain","locations":[{"end":163,"score":0.0,"start":117}],"model":"PS50006","name":"Forkhead-associated (FHA) domain profile"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49879","interpro_id":"IPR008984","interpro_name":"SMAD/FHA domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":182,"score":8.140000318235252e-6,"start":114}],"model":"0044369","name":"SMAD/FHA domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22699","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":206,"score":8.106839815758207e-20,"start":98}],"model":"cd22699","name":"forkhead associated (FHA) domain found in Saccharomyces cerevisiae plasmid maintenance protein 2 (PLM2) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":713925,"start_pos":712078,"strand":"reverse"},"low_complexity_region_coords":[[17,26],[48,58],[69,85],[232,243],[270,295],[493,505],[598,615]],"name":"tos4","ortholog_annotations":[{"gene_uniquename":"SJAG_04512","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP14E8.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04512","ortholog_taxonid":4932,"ortholog_uniquename":"YDR501W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04512","ortholog_taxonid":4932,"ortholog_uniquename":"YLR183C","reference_uniquename":"PMID:29761456"}],"product":"chromatin binding FHA domain protein Tos4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0006355","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003682":null,"GO:0005634":null,"GO:0006974":null,"GO:0045892":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04512.1"],"transcripts_by_uniquename":{"SJAG_04512.1":null},"uniprot_identifier":"B6K709","uniquename":"SJAG_04512"}


id: SJAG_04513
data:
  {"coiled_coil_coords":[[70,104]],"cv_annotations":{"biological_process":[{"annotations":[97205],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[97206],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[60253],"is_not":false,"summary":null,"term":"GO:0061025"},{"annotations":[97207],"is_not":false,"summary":null,"term":"GO:0006906"}],"cellular_component":[{"annotations":[97199],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[97200],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[97201],"is_not":false,"summary":null,"term":"GO:0012507"},{"annotations":[97202],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[97203],"is_not":false,"summary":null,"term":"GO:0031902"},{"annotations":[97204],"is_not":false,"summary":null,"term":"GO:0031201"}],"molecular_function":[{"annotations":[97208],"is_not":false,"summary":null,"term":"GO:0005484"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K710","GOA:B6K710","EnsemblGenomes-Tr:EEB09314","EnsemblGenomes-Gn:SJAG_04513","InterPro:IPR027027"],"deletion_viability":"unknown","disordered_region_coords":[[95,99],[102,104],[109,119],[121,122],[127,133],[136,137]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"},{"name":"ppk1","uniquename":"SJAG_04507"}],"genes_by_uniquename":{"HGNC:4431":null,"SJAG_04513":null,"SPAP14E8.03":null,"YLR078C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12352","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":211,"score":2.499999956129175e-14,"start":148}],"model":"PF12352","name":"Snare region anchored in the vesicle membrane C-terminus"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF028865","interpro_id":"IPR027027","interpro_name":"GOSR2/Membrin/Bos1","interpro_type":"Family","locations":[{"end":238,"score":0.0,"start":2}],"model":"PIRSF028865","name":"Golgi SNAP receptor complex member 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21230","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":236,"score":2.0000000072549875e-15,"start":41}],"model":"PTHR21230:SF1","name":"VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd15863","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":211,"score":2.7003300999374e-21,"start":146}],"model":"cd15863","name":"SNARE motif of GS27"}],"location":{"chromosome_name":"supercont5.3","end_pos":711320,"start_pos":710479,"strand":"reverse"},"low_complexity_region_coords":[[46,54],[121,142]],"name":"bos1","ortholog_annotations":[{"gene_uniquename":"SJAG_04513","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4431","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04513","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP14E8.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04513","ortholog_taxonid":4932,"ortholog_uniquename":"YLR078C","reference_uniquename":"PMID:29761456"}],"product":"SNARE Bos1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005768","GO:0005783","GO:0060090","GO:0016192","GO:0005789","GO:0005794","GO:0061024","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005484":null,"GO:0005737":null,"GO:0005789":null,"GO:0005794":null,"GO:0006886":null,"GO:0006888":null,"GO:0006906":null,"GO:0012507":null,"GO:0031201":null,"GO:0031902":null,"GO:0061025":null},"tm_domain_coords":[[217,234]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04513.1"],"transcripts_by_uniquename":{"SJAG_04513.1":null},"uniprot_identifier":"B6K710","uniquename":"SJAG_04513"}


id: SJAG_04514
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97211],"is_not":false,"summary":null,"term":"GO:0034982"},{"annotations":[97212],"is_not":false,"summary":null,"term":"GO:0006515"}],"cellular_component":[{"annotations":[97209],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[97210],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[97213],"is_not":false,"summary":null,"term":"GO:0004222"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04514","EnsemblGenomes-Tr:EEB09315","UniProtKB/TrEMBL:B6K711","GOA:B6K711","InterPro:IPR001915"],"deletion_viability":"unknown","disordered_region_coords":[[305,306]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"},{"name":"pds5","uniquename":"SJAG_04508"}],"genes_by_uniquename":{"HGNC:29661":null,"SJAG_04514":null,"SPAP14E8.04":null,"YKR087C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2010.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":210,"score":4.7999999808201466e-11,"start":127}],"model":"3cqbA01","name":"Metalloproteases (\"zincins\"), catalytic domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01435","interpro_id":"IPR001915","interpro_name":"Peptidase M48","interpro_type":"Domain","locations":[{"end":310,"score":1.3000000088243773e-31,"start":134}],"model":"PF01435","name":"Peptidase family M48"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22726","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":333,"score":0.0,"start":55}],"model":"PTHR22726:SF1","name":"METALLOENDOPEPTIDASE OMA1"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07331","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":314,"score":0.0,"start":136}],"model":"cd07331","name":"Peptidase M48C, integral membrane endopeptidase"}],"location":{"chromosome_name":"supercont5.3","end_pos":710219,"start_pos":709200,"strand":"reverse"},"low_complexity_region_coords":[[236,244]],"name":"oma1","ortholog_annotations":[{"gene_uniquename":"SJAG_04514","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29661","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04514","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP14E8.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04514","ortholog_taxonid":4932,"ortholog_uniquename":"YKR087C","reference_uniquename":"PMID:29761456"}],"product":"metallopeptidase Oma1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0051604","GO:0030163","GO:0008233","GO:0140096","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005739":null,"GO:0005743":null,"GO:0006515":null,"GO:0034982":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04514.1"],"transcripts_by_uniquename":{"SJAG_04514.1":null},"uniprot_identifier":"B6K711","uniquename":"SJAG_04514"}


id: SJAG_04515
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97217],"is_not":false,"summary":null,"term":"GO:1990542"}],"cellular_component":[{"annotations":[97214],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[97215],"is_not":false,"summary":null,"term":"GO:0016020"},{"annotations":[97216],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["GOA:B6K712","UniProtKB/TrEMBL:B6K712","EnsemblGenomes-Gn:SJAG_04515","InterPro:IPR005349","EnsemblGenomes-Tr:EEB09316"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"},{"name":"cdc42","uniquename":"SJAG_04509"}],"genes_by_uniquename":{"HGNC:20952":null,"HGNC:21076":null,"HGNC:21384":null,"SJAG_04515":null,"SPAP14E8.05c":null,"YJR085C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.1740","interpro_id":"IPR044890","interpro_name":"TMEM14 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":107,"score":1.300000039524536e-20,"start":1}],"model":"2losA00","name":"Transmembrane protein 14-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03647","interpro_id":"IPR005349","interpro_name":"TMEM14 family","interpro_type":"Family","locations":[{"end":99,"score":9.599999695349016e-19,"start":10}],"model":"PF03647","name":"Transmembrane proteins 14C"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12668","interpro_id":"IPR005349","interpro_name":"TMEM14 family","interpro_type":"Family","locations":[{"end":93,"score":2.000000026702864e-10,"start":2}],"model":"PTHR12668:SF53","name":"TRANSMEMBRANE PROTEIN 14, 15"}],"location":{"chromosome_name":"supercont5.3","end_pos":708842,"start_pos":708507,"strand":"forward"},"low_complexity_region_coords":[[60,74]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04515","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20952","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04515","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21076","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04515","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21384","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04515","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP14E8.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04515","ortholog_taxonid":4932,"ortholog_uniquename":"YJR085C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial protoporphyrinogen IX import factor, TMEM14 family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005739","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005783":null,"GO:0016020":null,"GO:1990542":null},"tm_domain_coords":[[9,26]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04515.1"],"transcripts_by_uniquename":{"SJAG_04515.1":null},"uniprot_identifier":"B6K712","uniquename":"SJAG_04515"}


id: SJAG_04516
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93509],"is_not":false,"summary":null,"term":"GO:0098849"},{"annotations":[93510],"is_not":false,"summary":null,"term":"GO:0071276"},{"annotations":[93511],"is_not":false,"summary":null,"term":"GO:0010273"},{"annotations":[93512],"is_not":false,"summary":null,"term":"GO:0046938"}],"cellular_component":[{"annotations":[93506],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[93507],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93508],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[93513],"is_not":false,"summary":null,"term":"GO:0046870"},{"annotations":[93514],"is_not":false,"summary":null,"term":"GO:0016756"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04516","InterPro:IPR040409","GOA:B6K713","InterPro:IPR038765","EnsemblGenomes-Tr:EEB09317","UniProtKB/TrEMBL:B6K713","InterPro:IPR038156","InterPro:IPR007719"],"deletion_viability":"unknown","disordered_region_coords":[[29,30]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"},{"name":"pss1","uniquename":"SJAG_04511"}],"genes_by_uniquename":{"SJAG_04516":null,"SPAC3H1.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.70.30","interpro_id":"IPR038156","interpro_name":"Phytochelatin synthase, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":254,"score":0.0,"start":51}],"model":"2bu3B00","name":"Phytochelatin synthase, N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05023","interpro_id":"IPR007719","interpro_name":"Phytochelatin synthase, N-terminal catalytic domain","interpro_type":"Domain","locations":[{"end":248,"score":0.0,"start":42}],"model":"PF05023","name":"Phytochelatin synthase"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51443","interpro_id":"IPR007719","interpro_name":"Phytochelatin synthase, N-terminal catalytic domain","interpro_type":"Domain","locations":[{"end":256,"score":0.0,"start":37}],"model":"PS51443","name":"Phytochelatin synthase (PCS) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR33447","interpro_id":"IPR040409","interpro_name":"Phytochelatin synthase","interpro_type":"Family","locations":[{"end":404,"score":0.0,"start":39}],"model":"PTHR33447:SF2","name":"GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54001","interpro_id":"IPR038765","interpro_name":"Papain-like cysteine peptidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":251,"score":0.0,"start":47}],"model":"0052048","name":"Cysteine proteinases"}],"location":{"chromosome_name":"supercont5.3","end_pos":707999,"start_pos":706749,"strand":"reverse"},"name":"pcs2","ortholog_annotations":[{"gene_uniquename":"SJAG_04516","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.10","reference_uniquename":"PMID:21511999"}],"product":"phytochelatin synthetase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0016746","GO:0019748","GO:0005829","GO:0098754","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0010273":null,"GO:0016756":null,"GO:0046870":null,"GO:0046938":null,"GO:0071276":null,"GO:0098849":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04516.1"],"transcripts_by_uniquename":{"SJAG_04516.1":null},"uniprot_identifier":"B6K713","uniquename":"SJAG_04516"}


id: SJAG_04517
data:
  {"coiled_coil_coords":[[28,48],[139,159],[172,192]],"cv_annotations":{"biological_process":[{"annotations":[109035],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[109036],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[109037],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[109027],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[109028],"is_not":false,"summary":null,"term":"GO:0030130"},{"annotations":[109029],"is_not":false,"summary":null,"term":"GO:0005905"},{"annotations":[109030],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109031],"is_not":false,"summary":null,"term":"GO:0031410"},{"annotations":[109032],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[109033],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[109034],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[109038],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["GOA:B6K714","EnsemblGenomes-Tr:EEB09318","InterPro:IPR000996","UniProtKB/TrEMBL:B6K714","EnsemblGenomes-Gn:SJAG_04517"],"deletion_viability":"unknown","disordered_region_coords":[[1,3],[8,143],[147,160],[182,202],[204,210],[233,236],[248,250]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"},{"name":"tos4","uniquename":"SJAG_04512"}],"genes_by_uniquename":{"HGNC:2090":null,"HGNC:2091":null,"SJAG_04517":null,"SPBC9B6.08":null,"YGR167W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01086","interpro_id":"IPR000996","interpro_name":"Clathrin light chain","interpro_type":"Family","locations":[{"end":247,"score":0.0,"start":4}],"model":"PF01086","name":"Clathrin light chain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10639","interpro_id":"IPR000996","interpro_name":"Clathrin light chain","interpro_type":"Family","locations":[{"end":221,"score":7.100000032345122e-10,"start":39}],"model":"PTHR10639:SF7","name":"CLATHRIN LIGHT CHAIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":706171,"start_pos":705419,"strand":"reverse"},"low_complexity_region_coords":[[115,131]],"name":"clc1","ortholog_annotations":[{"gene_uniquename":"SJAG_04517","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2090","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04517","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2091","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04517","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04517","ortholog_taxonid":4932,"ortholog_uniquename":"YGR167W","reference_uniquename":"PMID:29761456"}],"product":"clathrin light chain Clc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0031410","GO:0016192","GO:0005198","GO:0030479","GO:0005938","GO:0005768","GO:0005886","GO:0005794","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0005737":null,"GO:0005768":null,"GO:0005794":null,"GO:0005886":null,"GO:0005905":null,"GO:0006886":null,"GO:0006887":null,"GO:0030130":null,"GO:0030479":null,"GO:0031410":null,"GO:0072583":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04517.1"],"transcripts_by_uniquename":{"SJAG_04517.1":null},"uniprot_identifier":"B6K714","uniquename":"SJAG_04517"}


id: SJAG_04518
data:
  {"coiled_coil_coords":[[136,174]],"cv_annotations":{"biological_process":[{"annotations":[109042],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[109039],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109040],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109041],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[69043],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[69047],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[69046],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["InterPro:IPR038189","UniProtKB/TrEMBL:B6K715","InterPro:IPR013855","InterPro:IPR004918","EnsemblGenomes-Tr:EEB09319","GOA:B6K715","InterPro:IPR013874","InterPro:IPR013873","EnsemblGenomes-Gn:SJAG_04518"],"deletion_viability":"unknown","disordered_region_coords":[[44,51],[53,54],[87,89],[98,103],[130,135],[145,152],[154,159],[164,169],[202,201],[203,211],[215,243],[282,283],[381,386],[392,394],[462,463],[183,187]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"},{"name":"bos1","uniquename":"SJAG_04513"}],"genes_by_uniquename":{"HGNC:1735":null,"SJAG_04518":null,"SPBC9B6.10":null,"YDR168W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.58.610","interpro_id":"IPR038189","interpro_name":"Cdc37, Hsp90-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":358,"score":2.3000000784719956e-22,"start":241}],"model":"2w0gA00","name":"Cdc37, Hsp90 binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03234","interpro_id":"IPR013855","interpro_name":"Cdc37, N-terminal domain","interpro_type":"Domain","locations":[{"end":124,"score":9.99994610111476e-41,"start":3}],"model":"PF03234","name":"Cdc37 N terminal kinase binding"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08564","interpro_id":"IPR013873","interpro_name":"Cdc37, C-terminal","interpro_type":"Domain","locations":[{"end":456,"score":3.999999954906409e-26,"start":382}],"model":"PF08564","name":"Cdc37 C terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08565","interpro_id":"IPR013874","interpro_name":"Cdc37, Hsp90 binding","interpro_type":"Domain","locations":[{"end":357,"score":3.299999821209963e-33,"start":248}],"model":"PF08565","name":"Cdc37 Hsp90 binding domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12800","interpro_id":"IPR004918","interpro_name":"Cdc37","interpro_type":"Family","locations":[{"end":454,"score":0.0,"start":1}],"model":"PTHR12800:SF4","name":"CDC37-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01069","interpro_id":"IPR013873","interpro_name":"Cdc37, C-terminal","interpro_type":"Domain","locations":[{"end":460,"score":3.999999999279835e-23,"start":380}],"model":"SM01069","name":"Cdc37 C terminal domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01070","interpro_id":"IPR013874","interpro_name":"Cdc37, Hsp90 binding","interpro_type":"Domain","locations":[{"end":365,"score":2.5999691707082656e-41,"start":183}],"model":"SM01070","name":"Cdc37 Hsp90 binding domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01071","interpro_id":"IPR013855","interpro_name":"Cdc37, N-terminal domain","interpro_type":"Domain","locations":[{"end":184,"score":0.0,"start":2}],"model":"SM01071","name":"Cdc37 N terminal kinase binding"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF101391","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":448,"score":0.0,"start":240}],"model":"0044500","name":"Hsp90 co-chaperone CDC37"}],"location":{"chromosome_name":"supercont5.3","end_pos":704878,"start_pos":703151,"strand":"reverse"},"low_complexity_region_coords":[[188,201],[215,245],[384,397]],"name":"cdc37","ortholog_annotations":[{"gene_uniquename":"SJAG_04518","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1735","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04518","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04518","ortholog_taxonid":4932,"ortholog_uniquename":"YDR168W","reference_uniquename":"PMID:29761456"}],"product":"Hsp90 co-chaperone Cdc37","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0051082","GO:0051604","GO:0005634","GO:0006457","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006457":null,"GO:0031072":null,"GO:0051082":null,"GO:0051087":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04518.1"],"transcripts_by_uniquename":{"SJAG_04518.1":null},"uniprot_identifier":"B6K715","uniquename":"SJAG_04518"}


id: SJAG_04519
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109046],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[109043],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109044],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109045],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109047],"is_not":false,"summary":null,"term":"GO:0004535"},{"annotations":[109048],"is_not":false,"summary":null,"term":"GO:0004521"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04519","InterPro:IPR036691","UniProtKB/TrEMBL:B6K716","InterPro:IPR005135","EnsemblGenomes-Tr:EEB09320"],"deletion_viability":"unknown","disordered_region_coords":[[1,9],[16,18],[40,50],[52,53],[266,267],[303,345],[399,401],[403,404],[406,408],[435,440],[457,475]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"},{"name":"oma1","uniquename":"SJAG_04514"}],"genes_by_uniquename":{"HGNC:25386":null,"SJAG_04519":null,"SPBC9B6.11c":null,"YML118W":null,"YMR285C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.10.10","interpro_id":"IPR036691","interpro_name":"Endonuclease/exonuclease/phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":487,"score":0.0,"start":51}],"model":"3ngqA00","name":"Endonuclease/exonuclease/phosphatase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03372","interpro_id":"IPR005135","interpro_name":"Endonuclease/exonuclease/phosphatase","interpro_type":"Domain","locations":[{"end":438,"score":2.199999944383646e-26,"start":80}],"model":"PF03372","name":"Endonuclease/Exonuclease/phosphatase family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12121","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":485,"score":0.0,"start":32}],"model":"PTHR12121:SF68","name":"CARBON CATABOLITE REPRESSOR PROTEIN 4"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56219","interpro_id":"IPR036691","interpro_name":"Endonuclease/exonuclease/phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":486,"score":8.919999907915384e-29,"start":71}],"model":"0047330","name":"DNase I-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":702927,"start_pos":701464,"strand":"forward"},"low_complexity_region_coords":[[23,39],[328,345],[350,359]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04519","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25386","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04519","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04519","ortholog_taxonid":4932,"ortholog_uniquename":"YML118W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04519","ortholog_taxonid":4932,"ortholog_uniquename":"YMR285C","reference_uniquename":"PMID:29761456"}],"product":"CCR4/nocturin family endoribonuclease","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016788","GO:0042254","GO:0005829","GO:0004527","GO:0140098","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004521":null,"GO:0004535":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006364":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04519.1"],"transcripts_by_uniquename":{"SJAG_04519.1":null},"uniprot_identifier":"B6K716","uniquename":"SJAG_04519"}


id: SJAG_04520
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103734],"is_not":false,"summary":null,"term":"GO:0031145"}],"cellular_component":[{"annotations":[103731],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[103732],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103733],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04520","GOA:B6K717","EnsemblGenomes-Tr:EEB09321","UniProtKB/TrEMBL:B6K717","InterPro:IPR008401"],"deletion_viability":"unknown","disordered_region_coords":[[2,4],[34,36],[40,41],[43,45],[50,51],[53,58],[60,61],[111,123],[127,135]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"},{"uniquename":"SJAG_04515"}],"genes_by_uniquename":{"HGNC:24540":null,"SJAG_04520":null,"SPBC28E12.01c":null,"YDR260C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05839","interpro_id":"IPR008401","interpro_name":"Apc13","interpro_type":"Family","locations":[{"end":81,"score":5.0000000843119176e-17,"start":1}],"model":"PF05839","name":"Apc13p protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28526","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":135,"score":2.600000079049072e-20,"start":1}],"model":"PTHR28526:SF1","name":"ANAPHASE-PROMOTING COMPLEX SUBUNIT 13"}],"location":{"chromosome_name":"supercont5.3","end_pos":701277,"start_pos":700870,"strand":"forward"},"name":"apc13","ortholog_annotations":[{"gene_uniquename":"SJAG_04520","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24540","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04520","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC28E12.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04520","ortholog_taxonid":4932,"ortholog_uniquename":"YDR260C","reference_uniquename":"PMID:29761456"}],"product":"anaphase-promoting complex TPR lobe accessory factor Apc13","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005680":null,"GO:0005829":null,"GO:0031145":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04520.1"],"transcripts_by_uniquename":{"SJAG_04520.1":null},"uniprot_identifier":"B6K717","uniquename":"SJAG_04520"}


id: SJAG_04521
data:
  {"coiled_coil_coords":[[278,298]],"cv_annotations":{"cellular_component":[{"annotations":[103735],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103736],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103737],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09322","UniProtKB/TrEMBL:B6K718","EnsemblGenomes-Gn:SJAG_04521"],"deletion_viability":"unknown","disordered_region_coords":[[64,68],[72,77],[167,168],[411,412],[421,422]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"},{"name":"pcs2","uniquename":"SJAG_04516"}],"genes_by_uniquename":{"HGNC:19351":null,"SJAG_04521":null,"SPBC28E12.02":null,"YLL032C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22453","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":635,"score":5.97574030248253e-26,"start":568}],"model":"cd22453","name":"type I K homology (KH) RNA-binding domain found in Schizosaccharomyces pombe meiotically up-regulated gene 60 protein (MUG60) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":699761,"start_pos":697821,"strand":"reverse"},"low_complexity_region_coords":[[169,185]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04521","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19351","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04521","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC28E12.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04521","ortholog_taxonid":4932,"ortholog_uniquename":"YLL032C","reference_uniquename":"PMID:29761456"}],"product":"RNA-binding protein, Human BICC1 ortholog, implicated in RNA metabolism","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04521.1"],"transcripts_by_uniquename":{"SJAG_04521.1":null},"uniprot_identifier":"B6K718","uniquename":"SJAG_04521"}


id: SJAG_04522
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"coiled_coil_coords":[[582,609],[617,644]],"cv_annotations":{"biological_process":[{"annotations":[103743],"is_not":false,"summary":null,"term":"GO:0061245"},{"annotations":[103744],"is_not":false,"summary":null,"term":"GO:1903138"},{"annotations":[103745],"is_not":false,"summary":null,"term":"GO:0061173"},{"annotations":[103746],"is_not":false,"summary":null,"term":"GO:2000784"},{"annotations":[103747],"is_not":false,"summary":null,"term":"GO:0032231"},{"annotations":[115431],"is_not":false,"summary":null,"term":"GO:0008360"},{"annotations":[103748],"is_not":false,"summary":null,"term":"GO:1903338"}],"cellular_component":[{"annotations":[103738],"is_not":false,"summary":null,"term":"GO:0071944"},{"annotations":[103739],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[103740],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[103741],"is_not":false,"summary":null,"term":"GO:0016328"},{"annotations":[103742],"is_not":false,"summary":null,"term":"GO:0031097"}],"molecular_function":[{"annotations":[103749],"is_not":false,"summary":null,"term":"GO:0005096"}],"multi_locus_phenotype":[{"annotations":[115418],"is_not":false,"summary":null,"term":"FYPO:0007783"},{"annotations":[115429],"is_not":false,"summary":null,"term":"FYPO:0004105"},{"annotations":[115420],"is_not":false,"summary":null,"term":"FYPO:0001369"},{"annotations":[115422],"is_not":false,"summary":null,"term":"FYPO:0004293"}],"single_locus_phenotype":[{"annotations":[115419],"is_not":false,"summary":null,"term":"FYPO:0007783"},{"annotations":[115421],"is_not":false,"summary":null,"term":"FYPO:0001369"},{"annotations":[115415],"is_not":false,"summary":null,"term":"FYPO:0006616"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04522","GOA:B6K719","InterPro:IPR001781","InterPro:IPR000198","InterPro:IPR008936","UniProtKB/TrEMBL:B6K719","EnsemblGenomes-Tr:EEB09323"],"deletion_viability":"unknown","disordered_region_coords":[[224,226],[228,232],[260,288],[356,468],[631,636],[645,665],[676,707],[721,723],[725,733],[783,785],[294,341]],"feature_publications":[{"reference_uniquename":"PMID:30664646","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"},{"name":"clc1","uniquename":"SJAG_04517"}],"genes_by_uniquename":{"HGNC:1943":null,"HGNC:1944":null,"SJAG_00028":null,"SJAG_04280":null,"SJAG_04522":null,"SPBC28E12.03":null,"YDR379W":null,"YOR127W":null},"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-G788E(aa)","display_uniquename":"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.555.10","interpro_id":"IPR008936","interpro_name":"Rho GTPase activation protein","interpro_type":"Homologous_superfamily","locations":[{"end":979,"score":0.0,"start":753}],"model":"3eapD00","name":"Rho GTPase activation protein"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.10.110.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":83,"score":8.300000270411445e-11,"start":16},{"end":143,"score":2.6999999458432455e-11,"start":84}],"model":"2dj7A00","name":"Cysteine Rich Protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00412","interpro_id":"IPR001781","interpro_name":"Zinc finger, LIM-type","interpro_type":"Domain","locations":[{"end":81,"score":6.799999852091787e-8,"start":28},{"end":136,"score":1.0000000116860974e-7,"start":85}],"model":"PF00412","name":"LIM domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00620","interpro_id":"IPR000198","interpro_name":"Rho GTPase-activating protein domain","interpro_type":"Domain","locations":[{"end":952,"score":2.000003233207595e-40,"start":808}],"model":"PF00620","name":"RhoGAP domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00478","interpro_id":"IPR001781","interpro_name":"Zinc finger, LIM-type","interpro_type":"Domain","locations":[{"end":62,"score":0.0,"start":28},{"end":118,"score":0.0,"start":85}],"model":"PS00478","name":"LIM zinc-binding domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50023","interpro_id":"IPR001781","interpro_name":"Zinc finger, LIM-type","interpro_type":"Domain","locations":[{"end":88,"score":0.0,"start":26}],"model":"PS50023","name":"LIM domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50238","interpro_id":"IPR000198","interpro_name":"Rho GTPase-activating protein domain","interpro_type":"Domain","locations":[{"end":979,"score":0.0,"start":786}],"model":"PS50238","name":"Rho GTPase-activating proteins domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23176","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":979,"score":0.0,"start":196}],"model":"PTHR23176:SF132","name":"RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00132","interpro_id":"IPR001781","interpro_name":"Zinc finger, LIM-type","interpro_type":"Domain","locations":[{"end":81,"score":1.4000000270186774e-8,"start":27},{"end":135,"score":2.2999999682582484e-9,"start":84}],"model":"SM00132","name":"Zinc-binding domain present in Lin-11, Isl-1, Mec-3."},{"dbname":"SMART","evidence":"Smart scan","id":"SM00324","interpro_id":"IPR000198","interpro_name":"Rho GTPase-activating protein domain","interpro_type":"Domain","locations":[{"end":976,"score":0.0,"start":805}],"model":"SM00324","name":"GTPase-activator protein for Rho-like GTPases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48350","interpro_id":"IPR008936","interpro_name":"Rho GTPase activation protein","interpro_type":"Homologous_superfamily","locations":[{"end":979,"score":0.0,"start":806}],"model":"0037426","name":"GTPase activation domain, GAP"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00159","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":974,"score":0.0,"start":808}],"model":"cd00159","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd08368","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":81,"score":1.1667800059456113e-10,"start":28},{"end":135,"score":1.4288200342934404e-13,"start":85}],"model":"cd08368","name":"LIM is a small protein-protein interaction domain, containing two zinc fingers"}],"location":{"chromosome_name":"supercont5.3","end_pos":697158,"start_pos":694006,"strand":"reverse"},"low_complexity_region_coords":[[182,191],[342,355],[666,675]],"name":"rga4","ortholog_annotations":[{"gene_uniquename":"SJAG_04522","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1943","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04522","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1944","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04522","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC28E12.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04522","ortholog_taxonid":4932,"ortholog_uniquename":"YDR379W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04522","ortholog_taxonid":4932,"ortholog_uniquename":"YOR127W","reference_uniquename":"PMID:29761456"}],"product":"RhoGAP Rga4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:30664646":null},"subset_termids":["GO:0023052","FYPO:0001320","FYPO:0000138","FYPO:0004803","GO:0007163","GO:0030234","GO:0030036","GO:0005938","FYPO:0000631","GO:0098772","GO:0005886","GO:0071554","FYPO:0000005","FYPO:0000032"],"target_of_annotations":[{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_04280","genotype_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:30664646","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0004105":null,"FYPO:0004293":null,"FYPO:0006616":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"GO:0005096":null,"GO:0005737":null,"GO:0008360":null,"GO:0016328":null,"GO:0031097":null,"GO:0032231":null,"GO:0061173":null,"GO:0061245":null,"GO:0071944":null,"GO:0097575":null,"GO:1903138":null,"GO:1903338":null,"GO:2000784":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04522.1"],"transcripts_by_uniquename":{"SJAG_04522.1":null},"uniprot_identifier":"B6K719","uniquename":"SJAG_04522"}


id: SJAG_04523
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04523","EnsemblGenomes-Tr:EEB09324","UniProtKB/TrEMBL:B6K720"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"},{"name":"cdc37","uniquename":"SJAG_04518"}],"genes_by_uniquename":{"SJAG_04523":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.3","end_pos":693106,"start_pos":692375,"strand":"reverse"},"product":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04523.1"],"transcripts_by_uniquename":{"SJAG_04523.1":null},"uniprot_identifier":"B6K720","uniquename":"SJAG_04523"}


id: SJAG_04524
data:
  {"coiled_coil_coords":[[236,279]],"cv_annotations":{"biological_process":[{"annotations":[103752],"is_not":false,"summary":null,"term":"GO:0000480"},{"annotations":[103753],"is_not":false,"summary":null,"term":"GO:0000447"},{"annotations":[103754],"is_not":false,"summary":null,"term":"GO:0000472"},{"annotations":[103755],"is_not":false,"summary":null,"term":"GO:0034462"}],"cellular_component":[{"annotations":[103750],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[103751],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103756],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR000504","EnsemblGenomes-Gn:SJAG_04524","EnsemblGenomes-Tr:EEB09325","InterPro:IPR034353","InterPro:IPR012677","InterPro:IPR039119","UniProtKB/TrEMBL:B6K721","GOA:B6K721","InterPro:IPR035979"],"deletion_viability":"unknown","disordered_region_coords":[[106,109],[157,165],[191,193],[236,237],[239,241],[254,257],[280,318],[320,324],[1,11],[24,57],[76,90]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"},{"uniquename":"SJAG_04519"}],"genes_by_uniquename":{"HGNC:17369":null,"SJAG_04524":null,"SPBC28E12.05":null,"YNR054C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":205,"score":2.3000000341777405e-12,"start":50}],"model":"1hl6C00","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":202,"score":0.0,"start":120}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12311","interpro_id":"IPR039119","interpro_name":"ABT1/Esf2","interpro_type":"Family","locations":[{"end":325,"score":0.0,"start":57}],"model":"PTHR12311:SF7","name":"ACTIVATOR OF BASAL TRANSCRIPTION 1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":206,"score":0.009600000455975533,"start":121}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":202,"score":1.780000036255558e-10,"start":62}],"model":"0047197","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12263","interpro_id":"IPR034353","interpro_name":"ABT1/ESF2, RNA recognition motif","interpro_type":"Domain","locations":[{"end":217,"score":0.0,"start":120}],"model":"cd12263","name":"RNA recognition motif (RRM) found in activator of basal transcription 1 (ABT1) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":691857,"start_pos":690871,"strand":"reverse"},"low_complexity_region_coords":[[12,23],[58,75],[91,105]],"name":"esf2","ortholog_annotations":[{"gene_uniquename":"SJAG_04524","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17369","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04524","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC28E12.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04524","ortholog_taxonid":4932,"ortholog_uniquename":"YNR054C","reference_uniquename":"PMID:29761456"}],"product":"U3 snoRNP-associated protein Esf2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005730","GO:0065003","GO:0005634","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000447":null,"GO:0000472":null,"GO:0000480":null,"GO:0003723":null,"GO:0005634":null,"GO:0005730":null,"GO:0034462":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04524.1"],"transcripts_by_uniquename":{"SJAG_04524.1":null},"uniprot_identifier":"B6K721","uniquename":"SJAG_04524"}


id: SJAG_04525
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K722","InterPro:IPR018466","EnsemblGenomes-Gn:SJAG_04525","EnsemblGenomes-Tr:EEB09326"],"deletion_viability":"unknown","disordered_region_coords":[[133,136]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"},{"name":"apc13","uniquename":"SJAG_04520"}],"genes_by_uniquename":{"SJAG_04525":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10342","interpro_id":"IPR018466","interpro_name":"Yeast cell wall synthesis Kre9/Knh1-like, N-terminal","interpro_type":"Domain","locations":[{"end":113,"score":2.5999999930803597e-9,"start":23}],"model":"PF10342","name":"Kre9/KNH-like N-terminal Ig-like domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR35185","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":234,"score":5.69999985788757e-18,"start":3}],"model":"PTHR35185:SF1","name":"SERINE/THREONINE-RICH PROTEIN ADG2-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":690609,"start_pos":689827,"strand":"forward"},"low_complexity_region_coords":[[117,235]],"product":"conserved fungal cell surface protein, Kre9/Knh1 family","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04525.1"],"transcripts_by_uniquename":{"SJAG_04525.1":null},"uniprot_identifier":"B6K722","uniquename":"SJAG_04525"}


id: SJAG_04527
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98296],"is_not":false,"summary":null,"term":"GO:0106410"},{"annotations":[98297],"is_not":false,"summary":null,"term":"GO:0000956"},{"annotations":[98298],"is_not":false,"summary":null,"term":"GO:0016070"},{"annotations":[98299],"is_not":false,"summary":null,"term":"GO:0006364"},{"annotations":[98300],"is_not":false,"summary":null,"term":"GO:0030847"},{"annotations":[98301],"is_not":false,"summary":null,"term":"GO:0034474"},{"annotations":[98302],"is_not":false,"summary":null,"term":"GO:0034475"}],"cellular_component":[{"annotations":[98293],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[98294],"is_not":false,"summary":null,"term":"GO:0005654"},{"annotations":[98295],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98303],"is_not":false,"summary":null,"term":"GO:0003725"},{"annotations":[98304],"is_not":false,"summary":null,"term":"GO:0032296"},{"annotations":[98305],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[98306],"is_not":false,"summary":null,"term":"GO:0004525"},{"annotations":[98307],"is_not":false,"summary":null,"term":"GO:0035613"}]},"dbxrefs":["InterPro:IPR036389","EnsemblGenomes-Gn:SJAG_04527","GOA:B6K723","EnsemblGenomes-Tr:EEB09327","InterPro:IPR000999","UniProtKB/TrEMBL:B6K723","InterPro:IPR014720"],"deletion_viability":"unknown","disordered_region_coords":[[1,42],[62,64],[66,74],[86,94],[116,119],[132,146]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"},{"uniquename":"SJAG_04521"}],"genes_by_uniquename":{"HGNC:17904":null,"SJAG_04527":null,"SPBC119.11c":null,"YMR239C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1520.10","interpro_id":"IPR036389","interpro_name":"Ribonuclease III, endonuclease domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":299,"score":3.2000001284576807e-38,"start":144}],"model":"3rv1B02","name":"Ribonuclease III domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":377,"score":2.100000078344988e-12,"start":301}],"model":"1t4nA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00035","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":370,"score":2.4000000209412065e-8,"start":308}],"model":"PF00035","name":"Double-stranded RNA binding motif"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00636","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":277,"score":5.599999822286926e-21,"start":188}],"model":"PF00636","name":"Ribonuclease III domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00517","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":196,"score":0.0,"start":188}],"model":"PS00517","name":"Ribonuclease III family signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50137","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":372,"score":0.0,"start":336}],"model":"PS50137","name":"Double stranded RNA-binding domain (dsRBD) profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50142","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":278,"score":0.0,"start":155}],"model":"PS50142","name":"Ribonuclease III family domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11207","interpro_id":"IPR011907","interpro_name":"Ribonuclease III","interpro_type":"Family","locations":[{"end":375,"score":3.1000000112747857e-25,"start":86}],"model":"PTHR11207:SF0","name":"RIBONUCLEASE III"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00358","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":371,"score":0.003700000001117587,"start":307}],"model":"SM00358","name":"Double-stranded RNA binding motif"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00535","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":299,"score":3.400000104256421e-36,"start":157}],"model":"SM00535","name":"Ribonuclease III family"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54768","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":370,"score":5.289999904789511e-8,"start":260}],"model":"0050560","name":"dsRNA-binding domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF69065","interpro_id":"IPR036389","interpro_name":"Ribonuclease III, endonuclease domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":297,"score":7.15000006414611e-35,"start":153}],"model":"0041655","name":"RNase III domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00593","interpro_id":"IPR000999","interpro_name":"Ribonuclease III domain","interpro_type":"Domain","locations":[{"end":296,"score":6.055010664347535e-41,"start":157}],"model":"cd00593","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd19876","interpro_id":"IPR044449","interpro_name":"Rnt1/Pac1, double-stranded RNA binding domain, fungi","interpro_type":"Domain","locations":[{"end":368,"score":1.7190100751797628e-20,"start":304}],"model":"cd19876","name":"double-stranded RNA binding motif of Saccharomyces cerevisiae ribonuclease 3 (RNT1p) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":688827,"start_pos":687694,"strand":"forward"},"low_complexity_region_coords":[[43,61],[95,119],[147,158]],"name":"pac1","ortholog_annotations":[{"gene_uniquename":"SJAG_04527","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17904","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04527","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04527","ortholog_taxonid":4932,"ortholog_uniquename":"YMR239C","reference_uniquename":"PMID:29761456"}],"product":"double-strand-specific ribonuclease Pac1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140098","GO:0042254","GO:0016788","GO:0016074","GO:0016073","GO:0016071","GO:0005634","GO:0006351","GO:0005730","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000182":null,"GO:0000956":null,"GO:0003725":null,"GO:0004525":null,"GO:0005634":null,"GO:0005654":null,"GO:0005730":null,"GO:0006364":null,"GO:0016070":null,"GO:0030847":null,"GO:0032296":null,"GO:0034474":null,"GO:0034475":null,"GO:0035613":null,"GO:0106410":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04527.1"],"transcripts_by_uniquename":{"SJAG_04527.1":null},"uniprot_identifier":"B6K723","uniquename":"SJAG_04527"}


id: SJAG_04528
data:
  {"coiled_coil_coords":[[33,53],[95,122],[134,210],[253,277],[282,316]],"cv_annotations":{"biological_process":[{"annotations":[98309],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[98310],"is_not":false,"summary":null,"term":"GO:0007030"}],"cellular_component":[{"annotations":[98308],"is_not":false,"summary":null,"term":"GO:0005796"}]},"dbxrefs":["InterPro:IPR000237","InterPro:IPR019459","EnsemblGenomes-Tr:EEB09328","EnsemblGenomes-Gn:SJAG_04528","UniProtKB/TrEMBL:B6K724"],"deletion_viability":"unknown","disordered_region_coords":[[54,94],[102,104],[131,133],[159,160],[162,165],[174,181],[187,188],[190,195],[197,199],[204,205],[234,235],[260,262],[293,294],[296,298],[300,308],[310,314],[403,404],[1,32]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"},{"name":"rga4","uniquename":"SJAG_04522"}],"genes_by_uniquename":{"HGNC:12305":null,"SJAG_04528":null,"SPBC119.12":null,"YOR216C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10375","interpro_id":"IPR019459","interpro_name":"GRIP-related Arf-binding domain","interpro_type":"Domain","locations":[{"end":400,"score":5.000000097707407e-26,"start":353}],"model":"PF10375","name":"GRAB domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50913","interpro_id":"IPR000237","interpro_name":"GRIP domain","interpro_type":"Domain","locations":[{"end":403,"score":0.0,"start":352}],"model":"PS50913","name":"GRIP domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR18921","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":421,"score":4.100000030816267e-24,"start":43}],"model":"PTHR18921:SF2","name":"MYOSIN HEAVY CHAIN - RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":687349,"start_pos":686066,"strand":"reverse"},"low_complexity_region_coords":[[54,54],[413,427]],"name":"rud3","ortholog_annotations":[{"gene_uniquename":"SJAG_04528","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12305","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04528","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04528","ortholog_taxonid":4932,"ortholog_uniquename":"YOR216C","reference_uniquename":"PMID:29761456"}],"product":"Golgi matrix protein Rud3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005796":null,"GO:0006888":null,"GO:0007030":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04528.1"],"transcripts_by_uniquename":{"SJAG_04528.1":null},"uniprot_identifier":"B6K724","uniquename":"SJAG_04528"}


id: SJAG_04529
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98315],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[98316],"is_not":false,"summary":null,"term":"GO:0000398"},{"annotations":[98317],"is_not":false,"summary":null,"term":"GO:0000244"}],"cellular_component":[{"annotations":[98311],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[98312],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[98313],"is_not":false,"summary":null,"term":"GO:0005687"},{"annotations":[98314],"is_not":false,"summary":null,"term":"GO:0046540"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04529","InterPro:IPR027105","InterPro:IPR036070","InterPro:IPR019175","InterPro:IPR002687","InterPro:IPR012976","GOA:B6K725","InterPro:IPR029012","UniProtKB/TrEMBL:B6K725","EnsemblGenomes-Tr:EEB09329","InterPro:IPR042239"],"deletion_viability":"unknown","disordered_region_coords":[[46,61],[85,86],[319,321],[332,334],[340,341],[396,403],[426,430],[436,437],[493,497],[27,34]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"},{"name":"esf2","uniquename":"SJAG_04524"},{"uniquename":"SJAG_04523"}],"genes_by_uniquename":{"HGNC:15446":null,"SJAG_04529":null,"SPBC119.13c":null,"YGR091W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.246.90","interpro_id":"IPR042239","interpro_name":"Nop, C-terminal domain","interpro_type":"Homologous_superfamily","locations":[{"end":344,"score":3.900000113257676e-35,"start":221}],"model":"5gipA03","name":"Nop domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.4070","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":220,"score":1.2611686178923354e-44,"start":82}],"model":"2ozbB01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01798","interpro_id":"IPR002687","interpro_name":"Nop domain","interpro_type":"Domain","locations":[{"end":335,"score":0.0,"start":109}],"model":"PF01798","name":"snoRNA binding domain, fibrillarin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09785","interpro_id":"IPR019175","interpro_name":"Prp31 C-terminal","interpro_type":"Domain","locations":[{"end":462,"score":9.10844001811131e-44,"start":346}],"model":"PF09785","name":"Prp31 C terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51358","interpro_id":"IPR002687","interpro_name":"Nop domain","interpro_type":"Domain","locations":[{"end":338,"score":0.0,"start":220}],"model":"PS51358","name":"Nop domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13904","interpro_id":"IPR027105","interpro_name":"U4/U6 small nuclear ribonucleoprotein Prp31","interpro_type":"Family","locations":[{"end":486,"score":0.0,"start":1}],"model":"PTHR13904:SF0","name":"PRE-MRNA SPLICING FACTOR PRP31"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00931","interpro_id":"IPR012976","interpro_name":"NOSIC","interpro_type":"Domain","locations":[{"end":152,"score":1.4999999397961872e-13,"start":100}],"model":"SM00931","name":"NOSIC (NUC001) domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF89124","interpro_id":"IPR036070","interpro_name":"Nop domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":337,"score":0.0,"start":93}],"model":"0054436","name":"Nop domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":685910,"start_pos":684345,"strand":"forward"},"low_complexity_region_coords":[[2,26],[35,45],[167,180],[351,368],[397,410],[420,441]],"name":"prp31","ortholog_annotations":[{"gene_uniquename":"SJAG_04529","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15446","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04529","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04529","ortholog_taxonid":4932,"ortholog_uniquename":"YGR091W","reference_uniquename":"PMID:29761456"}],"product":"U4/U6 x U5 tri-snRNP complex subunit Prp31","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016071","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000244":null,"GO:0000398":null,"GO:0005634":null,"GO:0005687":null,"GO:0045292":null,"GO:0046540":null,"GO:0071011":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04529.1"],"transcripts_by_uniquename":{"SJAG_04529.1":null},"uniprot_identifier":"B6K725","uniquename":"SJAG_04529"}


id: SJAG_04530
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98320],"is_not":false,"summary":null,"term":"GO:0000730"},{"annotations":[98321],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[98322],"is_not":false,"summary":null,"term":"GO:0045002"},{"annotations":[98323],"is_not":false,"summary":null,"term":"GO:0006312"}],"cellular_component":[{"annotations":[98318],"is_not":false,"summary":null,"term":"GO:0000228"},{"annotations":[98319],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98324],"is_not":false,"summary":null,"term":"GO:0000150"},{"annotations":[98325],"is_not":false,"summary":null,"term":"GO:0003697"}]},"dbxrefs":["InterPro:IPR004585","EnsemblGenomes-Gn:SJAG_04530","EnsemblGenomes-Tr:EEB09330","GOA:B6K726","InterPro:IPR007232","InterPro:IPR042525","UniProtKB/TrEMBL:B6K726","InterPro:IPR041247"],"deletion_viability":"unknown","disordered_region_coords":[[2,3],[5,7],[12,19],[301,321],[178,199],[216,284]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"},{"uniquename":"SJAG_04525"}],"genes_by_uniquename":{"HGNC:9824":null,"SJAG_04530":null,"SPBC119.14":null,"YML032C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.390.80","interpro_id":"IPR042525","interpro_name":"DNA repair protein Rad52/59/22 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":171,"score":0.0,"start":20}],"model":"5jrbA01","name":"DNA repair protein Rad52/59/22"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04098","interpro_id":"IPR041247","interpro_name":"Rad52 family","interpro_type":"Family","locations":[{"end":175,"score":0.0,"start":25}],"model":"PF04098","name":"Rad52/22 family double-strand break repair protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12132","interpro_id":"IPR007232","interpro_name":"DNA repair protein Rad52/59/22","interpro_type":"Family","locations":[{"end":315,"score":0.0,"start":10}],"model":"PTHR12132:SF1","name":"DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54768","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":188,"score":0.0,"start":19}],"model":"0040155","name":"dsRNA-binding domain-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00607","interpro_id":"IPR004585","interpro_name":"DNA recombination/repair protein Rad52","interpro_type":"Family","locations":[{"end":185,"score":0.0,"start":27}],"model":"TIGR00607","name":"recombination protein rad52 (Provisional)"}],"location":{"chromosome_name":"supercont5.3","end_pos":683339,"start_pos":682053,"strand":"reverse"},"low_complexity_region_coords":[[41,50],[200,215],[285,300]],"name":"rti1","ortholog_annotations":[{"gene_uniquename":"SJAG_04530","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9824","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04530","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04530","ortholog_taxonid":4932,"ortholog_uniquename":"YML032C","reference_uniquename":"PMID:29761456"}],"product":"Rad22 homolog Rti1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0140097","GO:0006310","GO:0005634","GO:0006281","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000150":null,"GO:0000228":null,"GO:0000724":null,"GO:0000730":null,"GO:0003697":null,"GO:0005634":null,"GO:0006312":null,"GO:0045002":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04530.1"],"transcripts_by_uniquename":{"SJAG_04530.1":null},"uniprot_identifier":"B6K726","uniquename":"SJAG_04530"}


id: SJAG_04531
data:
  {"coiled_coil_coords":[[263,291]],"cv_annotations":{"biological_process":[{"annotations":[98327],"is_not":false,"summary":null,"term":"GO:1990114"}],"cellular_component":[{"annotations":[98326],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[98328],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[98329],"is_not":false,"summary":null,"term":"GO:0003924"}]},"dbxrefs":["InterPro:IPR027417","EnsemblGenomes-Tr:EEB09331","InterPro:IPR030230","UniProtKB/TrEMBL:B6K727","EnsemblGenomes-Gn:SJAG_04531","InterPro:IPR004130","GOA:B6K727"],"deletion_viability":"unknown","disordered_region_coords":[[209,210],[213,215],[294,337],[342,343],[350,360],[292,291]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"},{"name":"pac1","uniquename":"SJAG_04527"}],"genes_by_uniquename":{"HGNC:17030":null,"SJAG_04531":null,"SPBC119.15":null,"YJR072C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":275,"score":0.0,"start":8}],"model":"5hciC00","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03029","interpro_id":"IPR004130","interpro_name":"GPN-loop GTPase","interpro_type":"Family","locations":[{"end":261,"score":0.0,"start":13}],"model":"PF03029","name":"Conserved hypothetical ATP binding protein"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00449","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":30,"score":0.000019999999494757503,"start":9},{"end":182,"score":0.000019999999494757503,"start":169},{"end":260,"score":0.000019999999494757503,"start":238}],"model":"PR00449","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21231","interpro_id":"IPR004130","interpro_name":"GPN-loop GTPase","interpro_type":"Family","locations":[{"end":285,"score":0.0,"start":12}],"model":"PTHR21231:SF8","name":"XPA-BINDING PROTEIN 1-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":261,"score":0.0,"start":10}],"model":"0051376","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17870","interpro_id":"IPR030230","interpro_name":"GPN-loop GTPase 1","interpro_type":"Family","locations":[{"end":258,"score":0.0,"start":9}],"model":"cd17870","name":"GPN-loop GTPase 1"}],"location":{"chromosome_name":"supercont5.3","end_pos":681752,"start_pos":680546,"strand":"reverse"},"low_complexity_region_coords":[[149,159],[218,229],[263,272],[292,293]],"name":"npa3","ortholog_annotations":[{"gene_uniquename":"SJAG_04531","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17030","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04531","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04531","ortholog_taxonid":4932,"ortholog_uniquename":"YJR072C","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase II binding AAA family ATPase Npa3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0065003","GO:0016887","GO:0003924"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005829":null,"GO:0016887":null,"GO:1990114":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04531.1"],"transcripts_by_uniquename":{"SJAG_04531.1":null},"uniprot_identifier":"B6K727","uniquename":"SJAG_04531"}


id: SJAG_04532
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98330],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[98331],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[98332],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[98333],"is_not":false,"summary":null,"term":"GO:0005811"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04532","GOA:B6K728","UniProtKB/TrEMBL:B6K728","EnsemblGenomes-Tr:EEB09332","InterPro:IPR018626"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"},{"name":"rud3","uniquename":"SJAG_04528"}],"genes_by_uniquename":{"HGNC:29472":null,"SJAG_04532":null,"SPBC119.16c":null,"YKL047W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09804","interpro_id":"IPR018626","interpro_name":"Protein LCHN/Anr2","interpro_type":"Family","locations":[{"end":118,"score":2.2999999771400326e-7,"start":30},{"end":240,"score":2.0000000390829628e-25,"start":120}],"model":"PF09804","name":"DENN domain-containing protein 11"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28153","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":379,"score":0.0,"start":290}],"model":"PTHR28153:SF1","name":"PROTEIN, PUTATIVE-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":680514,"start_pos":679258,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04532","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29472","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04532","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04532","ortholog_taxonid":4932,"ortholog_uniquename":"YKL047W","reference_uniquename":"PMID:29761456"}],"product":"DENN domain-like containing protein, implicated in vesicle formation/trafficking","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005783":null,"GO:0005794":null,"GO:0005811":null},"tm_domain_coords":[[363,385]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04532.1"],"transcripts_by_uniquename":{"SJAG_04532.1":null},"uniprot_identifier":"B6K728","uniquename":"SJAG_04532"}


id: SJAG_04533
data:
  {"coiled_coil_coords":[[497,532]],"cv_annotations":{"biological_process":[{"annotations":[98337],"is_not":false,"summary":null,"term":"GO:0006627"},{"annotations":[98338],"is_not":false,"summary":null,"term":"GO:0051603"}],"cellular_component":[{"annotations":[98334],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[98335],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[98336],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[98339],"is_not":false,"summary":null,"term":"GO:0004222"},{"annotations":[98340],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR011765","InterPro:IPR011249","UniProtKB/TrEMBL:B6K729","InterPro:IPR013578","EnsemblGenomes-Tr:EEB09333","EnsemblGenomes-Gn:SJAG_04533","GOA:B6K729","InterPro:IPR007863"],"deletion_viability":"unknown","disordered_region_coords":[[89,91],[298,299],[498,499],[503,504],[509,512],[518,527],[792,799],[974,977]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"},{"name":"prp31","uniquename":"SJAG_04529"}],"genes_by_uniquename":{"HGNC:17663":null,"SJAG_04533":null,"SPBC119.17":null,"YDR430C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.830.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":276,"score":0.0,"start":15},{"end":508,"score":0.0,"start":279},{"end":980,"score":0.0,"start":530},{"end":805,"score":0.0,"start":550}],"model":"4l3tA01","name":"Metalloenzyme, LuxS/M16 peptidase-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00675","interpro_id":"IPR011765","interpro_name":"Peptidase M16, N-terminal","interpro_type":"Domain","locations":[{"end":166,"score":0.00007599999662488699,"start":82}],"model":"PF00675","name":"Insulinase (Peptidase family M16)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05193","interpro_id":"IPR007863","interpro_name":"Peptidase M16, C-terminal","interpro_type":"Domain","locations":[{"end":415,"score":1.400000027358074e-24,"start":230}],"model":"PF05193","name":"Peptidase M16 inactive domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08367","interpro_id":"IPR013578","interpro_name":"Peptidase M16C associated","interpro_type":"Domain","locations":[{"end":732,"score":0.0,"start":486}],"model":"PF08367","name":"Peptidase M16C associated"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43016","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":970,"score":0.0,"start":29}],"model":"PTHR43016:SF13","name":"PRESEQUENCE PROTEASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01264","interpro_id":"IPR013578","interpro_name":"Peptidase M16C associated","interpro_type":"Domain","locations":[{"end":732,"score":0.0,"start":486}],"model":"SM01264","name":"Peptidase M16C associated"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF63411","interpro_id":"IPR011249","interpro_name":"Metalloenzyme, LuxS/M16 peptidase-like","interpro_type":"Homologous_superfamily","locations":[{"end":279,"score":1.401298464324817e-45,"start":32},{"end":544,"score":0.0,"start":285},{"end":784,"score":0.0,"start":542},{"end":984,"score":3.1399998913316064e-38,"start":808}],"model":"0052687","name":"LuxS/MPP-like metallohydrolase"}],"location":{"chromosome_name":"supercont5.3","end_pos":679112,"start_pos":676065,"strand":"reverse"},"low_complexity_region_coords":[[856,868]],"name":"cym1","ortholog_annotations":[{"gene_uniquename":"SJAG_04533","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04533","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.17","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04533","ortholog_taxonid":4932,"ortholog_uniquename":"YDR430C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial metalloendopeptidase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0008233","GO:0006605","GO:0051604","GO:0140096","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005739":null,"GO:0005758":null,"GO:0005759":null,"GO:0006627":null,"GO:0008270":null,"GO:0051603":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04533.1"],"transcripts_by_uniquename":{"SJAG_04533.1":null},"uniprot_identifier":"B6K729","uniquename":"SJAG_04533"}


id: SJAG_04534
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92330,107236],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[92332,107238],"is_not":false,"summary":null,"term":"GO:0022618"}],"cellular_component":[{"annotations":[92326,107230],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92328,107232],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[107234],"is_not":false,"summary":null,"term":"GO:0030685"}],"molecular_function":[{"annotations":[92334,107240],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04534","InterPro:IPR038464","InterPro:IPR002675","GOA:B6K730","EnsemblGenomes-Tr:EEB09334","UniProtKB/TrEMBL:B6K730"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"},{"name":"mdm35","uniquename":"SJAG_06440"}],"genes_by_uniquename":{"HGNC:10349":null,"SJAG_04534":null,"SPAC30D11.12":null,"SPBC577.02":null,"YLR325C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.720.90","interpro_id":"IPR038464","interpro_name":"Ribosomal protein L38e superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":68,"score":9.400000002771752e-33,"start":1}],"model":"1vwxk00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01781","interpro_id":"IPR002675","interpro_name":"Ribosomal protein L38e","interpro_type":"Family","locations":[{"end":65,"score":6.8000001798142496e-34,"start":2}],"model":"PF01781","name":"Ribosomal L38e protein family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10965","interpro_id":"IPR002675","interpro_name":"Ribosomal protein L38e","interpro_type":"Family","locations":[{"end":65,"score":2.1999998866057475e-28,"start":1}],"model":"PTHR10965:SF0","name":"60S RIBOSOMAL PROTEIN L38"}],"location":{"chromosome_name":"supercont5.3","end_pos":675682,"start_pos":675422,"strand":"reverse"},"name":"rpl38a","ortholog_annotations":[{"gene_uniquename":"SJAG_04534","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10349","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04534","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC30D11.12","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04534","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04534","ortholog_taxonid":4932,"ortholog_uniquename":"YLR325C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L38","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005730","GO:0005634","GO:0005829","GO:0005198","GO:0030684","GO:0002181","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005829":null,"GO:0022618":null,"GO:0022625":null,"GO:0030685":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04534.1"],"transcripts_by_uniquename":{"SJAG_04534.1":null},"uniprot_identifier":"B6K730","uniquename":"SJAG_04534"}


id: SJAG_04535
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107242],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107243],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107244],"is_not":false,"summary":null,"term":"GO:0008080"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04535","InterPro:IPR016181","InterPro:IPR039135","GOA:B6K731","InterPro:IPR000182","UniProtKB/TrEMBL:B6K731","EnsemblGenomes-Tr:EEB09335"],"deletion_viability":"unknown","disordered_region_coords":[[112,124],[126,127],[210,217]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"},{"name":"rti1","uniquename":"SJAG_04530"}],"genes_by_uniquename":{"HGNC:23133":null,"SJAG_04535":null,"SPBC577.03c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":198,"score":1.899999993987984e-26,"start":2}],"model":"3eo4D00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13302","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":192,"score":1.199999961918627e-19,"start":13}],"model":"PF13302","name":"Acetyltransferase (GNAT) domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51186","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":210,"score":0.0,"start":33}],"model":"PS51186","name":"Gcn5-related N-acetyltransferase (GNAT) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13256","interpro_id":"IPR039135","interpro_name":"N-acetyltransferase 9-like","interpro_type":"Family","locations":[{"end":210,"score":0.0,"start":3}],"model":"PTHR13256:SF16","name":"N-ACETYLTRANSFERASE 9"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55729","interpro_id":"IPR016181","interpro_name":"Acyl-CoA N-acyltransferase","interpro_type":"Homologous_superfamily","locations":[{"end":197,"score":2.160000016305716e-13,"start":12}],"model":"0048674","name":"Acyl-CoA N-acyltransferases (Nat)"}],"location":{"chromosome_name":"supercont5.3","end_pos":674969,"start_pos":674172,"strand":"forward"},"low_complexity_region_coords":[[109,123]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04535","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23133","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04535","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.03c","reference_uniquename":"PMID:21511999"}],"product":"N-acetyltransferase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016746","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008080":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04535.1"],"transcripts_by_uniquename":{"SJAG_04535.1":null},"uniprot_identifier":"B6K731","uniquename":"SJAG_04535"}


id: SJAG_04536
data:
  {"coiled_coil_coords":[[138,172]],"cv_annotations":{"biological_process":[{"annotations":[107248],"is_not":false,"summary":null,"term":"GO:0016973"}],"cellular_component":[{"annotations":[107245],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107246],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[107247],"is_not":false,"summary":null,"term":"GO:0000445"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K732","EnsemblGenomes-Tr:EEB09336","InterPro:IPR019163","EnsemblGenomes-Gn:SJAG_04536"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"},{"name":"npa3","uniquename":"SJAG_04531"}],"genes_by_uniquename":{"HGNC:19074":null,"SJAG_04536":null,"SPBC577.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09766","interpro_id":"IPR019163","interpro_name":"THO complex, subunit 5","interpro_type":"Family","locations":[{"end":188,"score":1.0999999986962872e-17,"start":43}],"model":"PF09766","name":"Fms-interacting protein/Thoc5"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13375","interpro_id":"IPR019163","interpro_name":"THO complex, subunit 5","interpro_type":"Family","locations":[{"end":188,"score":9.99999983775159e-18,"start":4}],"model":"PTHR13375:SF3","name":"FMS INTERACTING PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":673974,"start_pos":673346,"strand":"reverse"},"name":"tho5","ortholog_annotations":[{"gene_uniquename":"SJAG_04536","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19074","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04536","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.04","reference_uniquename":"PMID:21511999"}],"product":"THO complex subunit Tho5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0006913"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000445":null,"GO:0005634":null,"GO:0005829":null,"GO:0016973":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04536.1"],"transcripts_by_uniquename":{"SJAG_04536.1":null},"uniprot_identifier":"B6K732","uniquename":"SJAG_04536"}


id: SJAG_04537
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107258],"is_not":false,"summary":null,"term":"GO:0046854"},{"annotations":[107259],"is_not":false,"summary":null,"term":"GO:0048015"}],"cellular_component":[{"annotations":[107256],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[107257],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[107260],"is_not":false,"summary":null,"term":"GO:0004430"},{"annotations":[107261],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["GOA:B6K734","InterPro:IPR036940","InterPro:IPR042236","EnsemblGenomes-Tr:EEB09338","InterPro:IPR000403","InterPro:IPR001263","UniProtKB/TrEMBL:B6K734","InterPro:IPR011009","EnsemblGenomes-Gn:SJAG_04537","InterPro:IPR015433","InterPro:IPR016024","InterPro:IPR018936"],"deletion_viability":"unknown","disordered_region_coords":[[1590,1602]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"}],"genes_by_uniquename":{"HGNC:8983":null,"SJAG_04537":null,"SPBC577.06c":null,"YLR305C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1070.11","interpro_id":"IPR036940","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1867,"score":0.0,"start":1673}],"model":"2x6hA03","name":"Phosphatidylinositol 3-/4-kinase, catalytic domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.70","interpro_id":"IPR042236","interpro_name":"Phosphoinositide 3-kinase, accessory (PIK) domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1494,"score":1.6999999848254795e-18,"start":1370}],"model":"2x6hA01","name":"Phosphatidylinositol 3-kinase, accessory domain (PIK)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1010.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1665,"score":1.6815581571897805e-44,"start":1496}],"model":"4jpsA04","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00454","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":1816,"score":2.500000538263333e-39,"start":1611}],"model":"PF00454","name":"Phosphatidylinositol 3- and 4-kinase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00613","interpro_id":"IPR001263","interpro_name":"Phosphoinositide 3-kinase, accessory (PIK) domain","interpro_type":"Domain","locations":[{"end":1497,"score":1.0999999780167719e-18,"start":1378}],"model":"PF00613","name":"Phosphoinositide 3-kinase family, accessory domain (PIK domain)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF19274","interpro_id":"IPR045495","interpro_name":"PI4-kinase, N-terminal","interpro_type":"Domain","locations":[{"end":1242,"score":1.0999999799921056e-9,"start":981}],"model":"PF19274","name":"PI4-kinase N-terminal region"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00915","interpro_id":"IPR018936","interpro_name":"Phosphatidylinositol 3/4-kinase, conserved site","interpro_type":"Conserved_site","locations":[{"end":1629,"score":0.0,"start":1615}],"model":"PS00915","name":"Phosphatidylinositol 3- and 4-kinases signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00916","interpro_id":"IPR018936","interpro_name":"Phosphatidylinositol 3/4-kinase, conserved site","interpro_type":"Conserved_site","locations":[{"end":1728,"score":0.0,"start":1708}],"model":"PS00916","name":"Phosphatidylinositol 3- and 4-kinases signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50290","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":1853,"score":0.0,"start":1589}],"model":"PS50290","name":"Phosphatidylinositol 3- and 4-kinases catalytic domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51545","interpro_id":"IPR001263","interpro_name":"Phosphoinositide 3-kinase, accessory (PIK) domain","interpro_type":"Domain","locations":[{"end":1486,"score":0.0,"start":1300}],"model":"PS51545","name":"PIK helical domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10048","interpro_id":"IPR015433","interpro_name":"Phosphatidylinositol kinase","interpro_type":"Family","locations":[{"end":1866,"score":0.0,"start":569}],"model":"PTHR10048:SF15","name":"PHOSPHATIDYLINOSITOL KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00145","interpro_id":"IPR001263","interpro_name":"Phosphoinositide 3-kinase, accessory (PIK) domain","interpro_type":"Domain","locations":[{"end":1500,"score":0.00014000000373926014,"start":1311}],"model":"SM00145","name":"Phosphoinositide 3-kinase family, accessory domain (PIK domain)"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00146","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":1866,"score":0.0,"start":1612}],"model":"SM00146","name":"Phosphoinositide 3-kinase, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":1472,"score":2.1899999491186117e-24,"start":1312}],"model":"0046492","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1862,"score":0.0,"start":1494}],"model":"0046494","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05167","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1866,"score":0.0,"start":1553}],"model":"cd05167","name":"Catalytic domain of Type III Phosphoinositide 4-kinase alpha"}],"location":{"chromosome_name":"supercont5.3","end_pos":672567,"start_pos":666657,"strand":"forward"},"low_complexity_region_coords":[[55,71],[311,328],[399,415],[826,837],[1012,1025],[1515,1530]],"name":"stt4","ortholog_annotations":[{"gene_uniquename":"SJAG_04537","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8983","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04537","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04537","ortholog_taxonid":4932,"ortholog_uniquename":"YLR305C","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane 1-phosphatidylinositol 4-kinase, type III-alpha Stt4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016301","GO:0005739","GO:0023052","GO:0005886","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004430":null,"GO:0005524":null,"GO:0005739":null,"GO:0005886":null,"GO:0046854":null,"GO:0048015":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04537.1"],"transcripts_by_uniquename":{"SJAG_04537.1":null},"uniprot_identifier":"B6K734","uniquename":"SJAG_04537"}


id: SJAG_04538
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107264],"is_not":false,"summary":null,"term":"GO:0000245"}],"cellular_component":[{"annotations":[107262],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[107263],"is_not":false,"summary":null,"term":"GO:0046540"}],"molecular_function":[{"annotations":[107265],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[107266],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09339","InterPro:IPR038765","GOA:B6K735","UniProtKB/TrEMBL:B6K735","InterPro:IPR028889","InterPro:IPR013083","InterPro:IPR033809","EnsemblGenomes-Gn:SJAG_04538","InterPro:IPR001607","InterPro:IPR001394"],"deletion_viability":"unknown","disordered_region_coords":[[2,47]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"}],"genes_by_uniquename":{"HGNC:20071":null,"SJAG_04538":null,"SPBC577.07":null,"YFR005C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":145,"score":2.8999999517622036e-37,"start":57}],"model":"4msxA01","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.70.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":503,"score":0.0,"start":146}],"model":"4msxA02","name":"Cysteine proteinases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00443","interpro_id":"IPR001394","interpro_name":"Peptidase C19, ubiquitin carboxyl-terminal hydrolase","interpro_type":"Domain","locations":[{"end":495,"score":2.3000000434046632e-27,"start":178}],"model":"PF00443","name":"Ubiquitin carboxyl-terminal hydrolase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02148","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":135,"score":6.70000027680473e-11,"start":76}],"model":"PF02148","name":"Zn-finger in ubiquitin-hydrolases and other protein"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50235","interpro_id":"IPR028889","interpro_name":"Ubiquitin specific protease domain","interpro_type":"Domain","locations":[{"end":502,"score":0.0,"start":177}],"model":"PS50235","name":"Ubiquitin specific protease (USP) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50271","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":152,"score":0.0,"start":55}],"model":"PS50271","name":"Zinc finger UBP-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21646","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":501,"score":5.5999998604633405e-37,"start":27}],"model":"PTHR21646:SF16","name":"UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00290","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":124,"score":7.80000022904126e-11,"start":75}],"model":"SM00290","name":"Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54001","interpro_id":"IPR038765","interpro_name":"Papain-like cysteine peptidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":501,"score":0.0,"start":166}],"model":"0052887","name":"Cysteine proteinases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":141,"score":6.709999793524005e-18,"start":59}],"model":"0054689","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02669","interpro_id":"IPR033809","interpro_name":"USP39","interpro_type":"Family","locations":[{"end":500,"score":0.0,"start":58}],"model":"cd02669","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":666355,"start_pos":664747,"strand":"reverse"},"name":"ubp10","ortholog_annotations":[{"gene_uniquename":"SJAG_04538","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20071","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04538","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04538","ortholog_taxonid":4932,"ortholog_uniquename":"YFR005C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin C-terminal hydrolase Ubp10","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005634","GO:0140096","GO:0016071","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000245":null,"GO:0004843":null,"GO:0005634":null,"GO:0008270":null,"GO:0046540":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04538.1"],"transcripts_by_uniquename":{"SJAG_04538.1":null},"uniprot_identifier":"B6K735","uniquename":"SJAG_04538"}


id: SJAG_04539
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107271],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[107272],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[107267],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[107268],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107269],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[107270],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107273],"is_not":false,"summary":null,"term":"GO:0015035"}]},"dbxrefs":["InterPro:IPR013766","InterPro:IPR008979","GOA:B6K736","InterPro:IPR010400","InterPro:IPR037047","UniProtKB/TrEMBL:B6K736","InterPro:IPR036249","EnsemblGenomes-Tr:EEB09340","EnsemblGenomes-Gn:SJAG_04539"],"deletion_viability":"unknown","disordered_region_coords":[[310,312],[314,315]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"}],"genes_by_uniquename":{"HGNC:12436":null,"SJAG_04539":null,"SPBC577.08c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.120.470","interpro_id":"IPR037047","interpro_name":"PITH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":316,"score":0.0,"start":147}],"model":"1wwyA00","name":"PITH domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":141,"score":1.7999999692676135e-32,"start":18}],"model":"2wz9A00","name":"Glutaredoxin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00085","interpro_id":"IPR013766","interpro_name":"Thioredoxin domain","interpro_type":"Domain","locations":[{"end":130,"score":9.50000023494788e-24,"start":36}],"model":"PF00085","name":"Thioredoxin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06201","interpro_id":"IPR010400","interpro_name":"PITH domain","interpro_type":"Domain","locations":[{"end":301,"score":1.6000000081769018e-37,"start":157}],"model":"PF06201","name":"PITH domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00421","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":57,"score":0.00004099999932805076,"start":49},{"end":66,"score":0.00004099999932805076,"start":57},{"end":109,"score":0.00004099999932805076,"start":98}],"model":"PR00421","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51352","interpro_id":"IPR013766","interpro_name":"Thioredoxin domain","interpro_type":"Domain","locations":[{"end":134,"score":0.0,"start":9}],"model":"PS51352","name":"Thioredoxin domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51532","interpro_id":"IPR010400","interpro_name":"PITH domain","interpro_type":"Domain","locations":[{"end":316,"score":0.0,"start":146}],"model":"PS51532","name":"PITH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46115","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":315,"score":0.0,"start":28}],"model":"PTHR46115:SF1","name":"THIOREDOXIN-LIKE PROTEIN 1"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49785","interpro_id":"IPR008979","interpro_name":"Galactose-binding-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":301,"score":4.039999524587021e-40,"start":147}],"model":"0051052","name":"Galactose-binding domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52833","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":135,"score":4.500000014269846e-30,"start":25}],"model":"0053311","name":"Thioredoxin-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02947","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":130,"score":8.93727978771993e-31,"start":37}],"model":"cd02947","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":664581,"start_pos":663557,"strand":"forward"},"name":"txl1","ortholog_annotations":[{"gene_uniquename":"SJAG_04539","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12436","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04539","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.08c","reference_uniquename":"PMID:21511999"}],"product":"thioredoxin-like I protein Txl1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0015036","GO:0006351","GO:0140096","GO:0016491","GO:0005829","GO:0034399","GO:0030163","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0015035":null,"GO:0034399":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04539.1"],"transcripts_by_uniquename":{"SJAG_04539.1":null},"uniprot_identifier":"B6K736","uniquename":"SJAG_04539"}


id: SJAG_04540
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107277],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[107278],"is_not":false,"summary":null,"term":"GO:0006283"}],"cellular_component":[{"annotations":[107274],"is_not":false,"summary":null,"term":"GO:0031464"},{"annotations":[107275],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107276],"is_not":false,"summary":null,"term":"GO:0070912"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K737","InterPro:IPR042238","InterPro:IPR020472","InterPro:IPR001680","InterPro:IPR015943","InterPro:IPR017986","EnsemblGenomes-Tr:EEB09341","InterPro:IPR019775","InterPro:IPR036322","GOA:B6K737","EnsemblGenomes-Gn:SJAG_04540"],"deletion_viability":"unknown","disordered_region_coords":[[235,240],[243,244],[376,377]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"}],"genes_by_uniquename":{"HGNC:3439":null,"SJAG_04540":null,"SPBC577.09":null,"YDR030C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":370,"score":0.0,"start":1}],"model":"6fcvB00","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":130,"score":0.00011000000085914508,"start":98},{"end":216,"score":8.399999842367833e-7,"start":178},{"end":272,"score":6.500000040432496e-7,"start":238}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00320","interpro_id":"IPR020472","interpro_name":"G-protein beta WD-40 repeat","interpro_type":"Repeat","locations":[{"end":77,"score":1.500000053056283e-7,"start":63},{"end":131,"score":1.500000053056283e-7,"start":117},{"end":217,"score":1.500000053056283e-7,"start":203}],"model":"PR00320","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":77,"score":0.0,"start":63},{"end":217,"score":0.0,"start":203},{"end":273,"score":0.0,"start":259}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":85,"score":0.0,"start":43},{"end":139,"score":0.0,"start":97},{"end":225,"score":0.0,"start":183},{"end":281,"score":0.0,"start":240}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":130,"score":0.0,"start":97},{"end":218,"score":0.0,"start":183},{"end":277,"score":0.0,"start":240}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46202","interpro_id":"IPR042238","interpro_name":"DNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1","interpro_type":"Family","locations":[{"end":377,"score":0.0,"start":1}],"model":"PTHR46202:SF1","name":"DNA EXCISION REPAIR PROTEIN ERCC-8"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":76,"score":0.017000000923871994,"start":34},{"end":130,"score":0.00003300000025774352,"start":87},{"end":216,"score":8.400000139907604e-10,"start":176},{"end":272,"score":1.0999999631167157e-6,"start":233},{"end":367,"score":8.0,"start":327}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":369,"score":0.0,"start":44}],"model":"0054424","name":"WD40 repeat-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":367,"score":2.633754476683137e-40,"start":40}],"model":"cd00200","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":663191,"start_pos":661772,"strand":"reverse"},"low_complexity_region_coords":[[70,82],[322,336]],"name":"ckn1","ortholog_annotations":[{"gene_uniquename":"SJAG_04540","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3439","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04540","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04540","ortholog_taxonid":4932,"ortholog_uniquename":"YDR030C","reference_uniquename":"PMID:29761456"}],"product":"ERCC8 DNA repair homolog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0005634","GO:0006281","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006283":null,"GO:0031464":null,"GO:0043161":null,"GO:0070912":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04540.1"],"transcripts_by_uniquename":{"SJAG_04540.1":null},"uniprot_identifier":"B6K737","uniquename":"SJAG_04540"}


id: SJAG_04541
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107282],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[107279],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107280],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[107281],"is_not":false,"summary":null,"term":"GO:0019774"}],"molecular_function":[{"annotations":[107283],"is_not":false,"summary":null,"term":"GO:0004175"}]},"dbxrefs":["InterPro:IPR023333","EnsemblGenomes-Gn:SJAG_04541","UniProtKB/TrEMBL:B6K738","EnsemblGenomes-Tr:EEB09342","GOA:B6K738","InterPro:IPR029055","InterPro:IPR016295","InterPro:IPR016050","InterPro:IPR001353"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"}],"genes_by_uniquename":{"HGNC:9541":null,"SJAG_04541":null,"SPBC577.10":null,"YFR050C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.20.10","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":264,"score":0.0,"start":38}],"model":"1ryp200","name":"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00227","interpro_id":"IPR001353","interpro_name":"Proteasome, subunit alpha/beta","interpro_type":"Family","locations":[{"end":233,"score":1.7999999365670533e-23,"start":43}],"model":"PF00227","name":"Proteasome subunit"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001213","interpro_id":"IPR016295","interpro_name":"Proteasome subunit beta 4","interpro_type":"Family","locations":[{"end":264,"score":0.0,"start":5}],"model":"PIRSF001213","name":"Proteasome endopeptidase complex, beta subunit"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00854","interpro_id":"IPR016050","interpro_name":"Proteasome beta-type subunit, conserved site","interpro_type":"Conserved_site","locations":[{"end":96,"score":0.0,"start":49}],"model":"PS00854","name":"Proteasome beta-type subunits signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51476","interpro_id":"IPR023333","interpro_name":"Proteasome B-type subunit","interpro_type":"Family","locations":[{"end":233,"score":0.0,"start":45}],"model":"PS51476","name":"Proteasome beta-type subunit profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR32194","interpro_id":"IPR023333","interpro_name":"Proteasome B-type subunit","interpro_type":"Family","locations":[{"end":240,"score":1.9999999996399175e-23,"start":37}],"model":"PTHR32194:SF6","name":"METALLOPROTEASE TLDD"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56235","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":256,"score":0.0,"start":39}],"model":"0039157","name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03760","interpro_id":"IPR016295","interpro_name":"Proteasome subunit beta 4","interpro_type":"Family","locations":[{"end":240,"score":0.0,"start":44}],"model":"cd03760","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":661495,"start_pos":660701,"strand":"reverse"},"low_complexity_region_coords":[[82,92]],"name":"pre4","ortholog_annotations":[{"gene_uniquename":"SJAG_04541","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9541","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04541","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04541","ortholog_taxonid":4932,"ortholog_uniquename":"YFR050C","reference_uniquename":"PMID:29761456"}],"product":"20S proteasome complex subunit beta 7, Pre4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0005634","GO:0030163","GO:0008233","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004175":null,"GO:0005634":null,"GO:0005829":null,"GO:0019774":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04541.1"],"transcripts_by_uniquename":{"SJAG_04541.1":null},"uniprot_identifier":"B6K738","uniquename":"SJAG_04541"}


id: SJAG_04543
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107284],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[107285],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["InterPro:IPR024500","UniProtKB/TrEMBL:B6K739","EnsemblGenomes-Tr:EEB09343","EnsemblGenomes-Gn:SJAG_04543"],"deletion_viability":"unknown","disordered_region_coords":[[241,242]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"}],"genes_by_uniquename":{"SJAG_04543":null,"SPBC577.11":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.530.20","interpro_id":"IPR023393","interpro_name":"START-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":237,"score":0.000045000000682193786,"start":21}],"model":"3p0lD00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11274","interpro_id":"IPR024500","interpro_name":"Domain of unknown function DUF3074","interpro_type":"Domain","locations":[{"end":231,"score":5.199999849456378e-16,"start":70}],"model":"PF11274","name":"Protein of unknown function (DUF3074)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR40370","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":241,"score":0.0,"start":1}],"model":"PTHR40370:SF1","name":"EXPRESSED PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55961","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":233,"score":2.880000057881027e-11,"start":27}],"model":"0046586","name":"Bet v1-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":658560,"start_pos":657832,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04543","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.11","reference_uniquename":"PMID:21511999"}],"product":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04543.1"],"transcripts_by_uniquename":{"SJAG_04543.1":null},"uniprot_identifier":"B6K739","uniquename":"SJAG_04543"}


id: SJAG_04544
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107288],"is_not":false,"summary":null,"term":"GO:0017183"},{"annotations":[107289],"is_not":false,"summary":null,"term":"GO:2000765"}],"cellular_component":[{"annotations":[107286],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107287],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107290],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[107291],"is_not":false,"summary":null,"term":"GO:0017178"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K740","InterPro:IPR030662","EnsemblGenomes-Gn:SJAG_04544","EnsemblGenomes-Tr:EEB09344","InterPro:IPR035959","InterPro:IPR014729","InterPro:IPR006175","InterPro:IPR002761"],"deletion_viability":"unknown","disordered_region_coords":[[78,82],[244,258]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"}],"genes_by_uniquename":{"HGNC:30543":null,"SJAG_04544":null,"SPBC577.12":null,"YLR143W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1330.40","interpro_id":"IPR035959","interpro_name":"RutC-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":411,"score":1.8999999327768552e-13,"start":300},{"end":557,"score":2.9999999047965676e-21,"start":415}],"model":"3gtzA00","name":"RutC-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":157,"score":0.0,"start":1}],"model":"3rk1B01","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1490.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":251,"score":7.800000024734399e-29,"start":158}],"model":"3rk1B02","name":"putative n-type atp pyrophosphatase, domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01042","interpro_id":"IPR006175","interpro_name":"YjgF/YER057c/UK114 family","interpro_type":"Family","locations":[{"end":404,"score":2.699999868127634e-7,"start":326},{"end":531,"score":6.399999818995639e-8,"start":422}],"model":"PF01042","name":"Endoribonuclease L-PSP"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01902","interpro_id":"IPR002761","interpro_name":"Diphthamide synthase domain","interpro_type":"Domain","locations":[{"end":228,"score":2.802596928649634e-45,"start":1}],"model":"PF01902","name":"Diphthamide synthase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12196","interpro_id":"IPR030662","interpro_name":"Diphthine--ammonia ligase/Uncharacterised protein MJ0570","interpro_type":"Family","locations":[{"end":573,"score":0.0,"start":1}],"model":"PTHR12196:SF2","name":"DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":233,"score":0.0,"start":1}],"model":"0052363","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55298","interpro_id":"IPR035959","interpro_name":"RutC-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":408,"score":1.7300000407921567e-12,"start":325},{"end":534,"score":2.5100000271044594e-16,"start":411}],"model":"0048608","name":"YjgF-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00290","interpro_id":"IPR002761","interpro_name":"Diphthamide synthase domain","interpro_type":"Domain","locations":[{"end":237,"score":0.0,"start":1}],"model":"TIGR00290","name":"diphthine--ammonia ligase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01994","interpro_id":"IPR002761","interpro_name":"Diphthamide synthase domain","interpro_type":"Domain","locations":[{"end":212,"score":0.0,"start":2}],"model":"cd01994","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06155","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":405,"score":1.3964099412485935e-31,"start":305}],"model":"cd06155","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06156","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":533,"score":3.407689887937735e-28,"start":429}],"model":"cd06156","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":657419,"start_pos":655515,"strand":"reverse"},"name":"dph6","ortholog_annotations":[{"gene_uniquename":"SJAG_04544","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30543","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04544","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04544","ortholog_taxonid":4932,"ortholog_uniquename":"YLR143W","reference_uniquename":"PMID:29761456"}],"product":"diphthamide synthetase Dph6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0016874","GO:0002181","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0017178":null,"GO:0017183":null,"GO:2000765":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04544.1"],"transcripts_by_uniquename":{"SJAG_04544.1":null},"uniprot_identifier":"B6K740","uniquename":"SJAG_04544"}


id: SJAG_04545
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61164,107294],"is_not":false,"summary":null,"term":"GO:0036092"}],"cellular_component":[{"annotations":[107292],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[107293],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[107295],"is_not":false,"summary":null,"term":"GO:0004445"},{"annotations":[107296],"is_not":false,"summary":null,"term":"GO:0043813"},{"annotations":[107297],"is_not":false,"summary":null,"term":"GO:0004439"}]},"dbxrefs":["GOA:B6K741","EnsemblGenomes-Gn:SJAG_04545","UniProtKB/TrEMBL:B6K741","EnsemblGenomes-Tr:EEB09345","InterPro:IPR036691","InterPro:IPR000300","InterPro:IPR005135","InterPro:IPR002013"],"deletion_viability":"unknown","disordered_region_coords":[[135,156],[885,894]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"}],"genes_by_uniquename":{"HGNC:8108":null,"SJAG_04545":null,"SPBC577.13":null,"YIL002C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.10.10","interpro_id":"IPR036691","interpro_name":"Endonuclease/exonuclease/phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":893,"score":0.0,"start":550}],"model":"1i9zA00","name":"Endonuclease/exonuclease/phosphatase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02383","interpro_id":"IPR002013","interpro_name":"SAC domain","interpro_type":"Domain","locations":[{"end":375,"score":1.7000000449535624e-34,"start":87}],"model":"PF02383","name":"SacI homology domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03372","interpro_id":"IPR005135","interpro_name":"Endonuclease/exonuclease/phosphatase","interpro_type":"Domain","locations":[{"end":854,"score":2.699999868127634e-7,"start":579}],"model":"PF03372","name":"Endonuclease/Exonuclease/phosphatase family"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50275","interpro_id":"IPR002013","interpro_name":"SAC domain","interpro_type":"Domain","locations":[{"end":490,"score":0.0,"start":170}],"model":"PS50275","name":"Sac phosphatase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11200","interpro_id":"IPR046985","interpro_name":"Inositol 5-phosphatase","interpro_type":"Family","locations":[{"end":880,"score":0.0,"start":187}],"model":"PTHR11200:SF296","name":"INOSITOL 5-PHOSPHATASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00128","interpro_id":"IPR000300","interpro_name":"Inositol polyphosphate-related phosphatase","interpro_type":"Domain","locations":[{"end":869,"score":0.0,"start":571}],"model":"SM00128","name":"Inositol polyphosphate phosphatase, catalytic domain homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56219","interpro_id":"IPR036691","interpro_name":"Endonuclease/exonuclease/phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":885,"score":0.0,"start":559}],"model":"0047330","name":"DNase I-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":655104,"start_pos":652195,"strand":"reverse"},"low_complexity_region_coords":[[135,160]],"name":"syj2","ortholog_annotations":[{"gene_uniquename":"SJAG_04545","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8108","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04545","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04545","ortholog_taxonid":4932,"ortholog_uniquename":"YIL002C","reference_uniquename":"PMID:29761456"}],"product":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006629","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004439":null,"GO:0004445":null,"GO:0005737":null,"GO:0016020":null,"GO:0036092":null,"GO:0043813":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04545.1"],"transcripts_by_uniquename":{"SJAG_04545.1":null},"uniprot_identifier":"B6K741","uniquename":"SJAG_04545"}


id: SJAG_04546
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107300],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[107301],"is_not":false,"summary":null,"term":"GO:0045732"},{"annotations":[107302],"is_not":false,"summary":null,"term":"GO:0010967"}],"cellular_component":[{"annotations":[107298],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[107299],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107303],"is_not":false,"summary":null,"term":"GO:0008073"}]},"dbxrefs":["InterPro:IPR002993","InterPro:IPR038581","UniProtKB/TrEMBL:B6K742","EnsemblGenomes-Tr:EEB09346","InterPro:IPR016181","GOA:B6K742","EnsemblGenomes-Gn:SJAG_04546"],"deletion_viability":"unknown","disordered_region_coords":[[19,24],[31,34],[37,38],[74,125],[127,132],[159,160]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"}],"genes_by_uniquename":{"HGNC:8095":null,"HGNC:8096":null,"HGNC:8097":null,"SJAG_04546":null,"SPBC577.14c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.60","interpro_id":"IPR038581","interpro_name":"Ornithine decarboxylase antizyme superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":233,"score":4.99999991225835e-15,"start":122}],"model":"4zgyB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02100","interpro_id":"IPR002993","interpro_name":"Ornithine decarboxylase antizyme","interpro_type":"Family","locations":[{"end":225,"score":4.200000156689976e-12,"start":163}],"model":"PF02100","name":"Ornithine decarboxylase antizyme"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10279","interpro_id":"IPR002993","interpro_name":"Ornithine decarboxylase antizyme","interpro_type":"Family","locations":[{"end":223,"score":6.299999966152825e-10,"start":94}],"model":"PTHR10279:SF10","name":"ORNITHINE DECARBOXYLASE ANTIZYME"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55729","interpro_id":"IPR016181","interpro_name":"Acyl-CoA N-acyltransferase","interpro_type":"Homologous_superfamily","locations":[{"end":234,"score":3.280000087761886e-22,"start":115}],"model":"0051600","name":"Acyl-CoA N-acyltransferases (Nat)"}],"location":{"chromosome_name":"supercont5.3","end_pos":651946,"start_pos":651178,"strand":"forward"},"low_complexity_region_coords":[[51,57]],"name":"spa1","ortholog_annotations":[{"gene_uniquename":"SJAG_04546","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8095","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04546","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8096","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04546","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8097","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04546","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.14c","reference_uniquename":"PMID:21511999"}],"product":"ornithine decarboxylase antizyme with +1 programmed ribosomal frameshift Spa1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0006520","GO:0098772","GO:0030234","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0006591":null,"GO:0008073":null,"GO:0010967":null,"GO:0045732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04546.1"],"transcripts_by_uniquename":{"SJAG_04546.1":null},"uniprot_identifier":"B6K742","uniquename":"SJAG_04546"}


id: SJAG_04547
data:
  {"coiled_coil_coords":[[17,37],[193,213],[288,308]],"cv_annotations":{"biological_process":[{"annotations":[107307],"is_not":false,"summary":null,"term":"GO:0034080"},{"annotations":[107308],"is_not":false,"summary":null,"term":"GO:0006335"}],"cellular_component":[{"annotations":[107304],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[107305],"is_not":false,"summary":null,"term":"GO:0005654"},{"annotations":[107306],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[78671],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[107309],"is_not":false,"summary":null,"term":"GO:0140713"}]},"dbxrefs":["GOA:B6K743","InterPro:IPR019544","EnsemblGenomes-Gn:SJAG_04547","UniProtKB/TrEMBL:B6K743","InterPro:IPR011990","EnsemblGenomes-Tr:EEB09347"],"deletion_viability":"unknown","disordered_region_coords":[[38,38],[70,88],[90,92],[131,137],[274,287],[309,322],[324,325],[335,340],[346,372],[104,117]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"},{"name":"pre4","uniquename":"SJAG_04541"}],"genes_by_uniquename":{"HGNC:7644":null,"SJAG_04547":null,"SPBC577.15c":null,"YLL022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.10","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":310,"score":1.0999999914511224e-27,"start":2}],"model":"4nq0A00","name":"Tetratricopeptide repeat domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10516","interpro_id":"IPR019544","interpro_name":"Tetratricopeptide, SHNi-TPR domain","interpro_type":"Domain","locations":[{"end":223,"score":1.100000014578155e-14,"start":187}],"model":"PF10516","name":"SHNi-TPR"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15081","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":372,"score":0.0,"start":2}],"model":"PTHR15081:SF1","name":"NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48452","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":262,"score":1.4299999406830466e-7,"start":5}],"model":"0040251","name":"TPR-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":650790,"start_pos":649672,"strand":"forward"},"low_complexity_region_coords":[[118,130],[138,152]],"name":"sim3","ortholog_annotations":[{"gene_uniquename":"SJAG_04547","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7644","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04547","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04547","ortholog_taxonid":4932,"ortholog_uniquename":"YLL022C","reference_uniquename":"PMID:29761456"}],"product":"CENP-A chaperone, NASP family, Sim3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005694","GO:0005654","GO:0006325","GO:0140104","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0005654":null,"GO:0006335":null,"GO:0034080":null,"GO:0042393":null,"GO:0140713":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04547.1"],"transcripts_by_uniquename":{"SJAG_04547.1":null},"uniprot_identifier":"B6K743","uniquename":"SJAG_04547"}


id: SJAG_04548
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106980],"is_not":false,"summary":null,"term":"GO:0016192"}],"cellular_component":[{"annotations":[106976],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[106977],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106978],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[106979],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106981],"is_not":false,"summary":null,"term":"GO:0005096"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04548","InterPro:IPR000195","InterPro:IPR035969","UniProtKB/TrEMBL:B6K744","EnsemblGenomes-Tr:EEB09348"],"deletion_viability":"unknown","disordered_region_coords":[[1,5],[25,67],[82,82],[101,102],[139,145],[155,156],[163,170],[173,174],[105,122]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"},{"uniquename":"SJAG_04543"}],"genes_by_uniquename":{"HGNC:1309":null,"HGNC:21602":null,"SJAG_04548":null,"SPBC530.01":null,"YOR070C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.750","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":236,"score":1.0000000116860974e-7,"start":184}],"model":"5ejcA01","name":"Ypt/Rab-GAP domain of gyp1p, domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.472.80","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":509,"score":2.9006878211523713e-43,"start":373}],"model":"6d0sA02","name":"Ypt/Rab-GAP domain of gyp1p, domain 3"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.270","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":372,"score":2.0999999838446953e-22,"start":247}],"model":"4p17A02","name":"putative rabgap domain of human tbc1 domain family member 14 like domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00566","interpro_id":"IPR000195","interpro_name":"Rab-GAP-TBC domain","interpro_type":"Domain","locations":[{"end":460,"score":0.0,"start":215}],"model":"PF00566","name":"Rab-GTPase-TBC domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50086","interpro_id":"IPR000195","interpro_name":"Rab-GAP-TBC domain","interpro_type":"Domain","locations":[{"end":438,"score":0.0,"start":211}],"model":"PS50086","name":"TBC/rab GAP domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22957","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":474,"score":0.0,"start":132}],"model":"PTHR22957:SF26","name":"TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00164","interpro_id":"IPR000195","interpro_name":"Rab-GAP-TBC domain","interpro_type":"Domain","locations":[{"end":465,"score":0.0,"start":208}],"model":"SM00164","name":"Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47923","interpro_id":"IPR035969","interpro_name":"Rab-GAP-TBC domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":398,"score":0.0,"start":189},{"end":498,"score":7.850003932224409e-40,"start":374}],"model":"0046806","name":"Ypt/Rab-GAP domain of gyp1p"}],"location":{"chromosome_name":"supercont5.3","end_pos":648393,"start_pos":646861,"strand":"reverse"},"low_complexity_region_coords":[[68,81],[123,138]],"name":"gyp1","ortholog_annotations":[{"gene_uniquename":"SJAG_04548","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1309","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04548","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21602","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04548","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC530.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04548","ortholog_taxonid":4932,"ortholog_uniquename":"YOR070C","reference_uniquename":"PMID:29761456"}],"product":"RabGAP Gyp1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016192","GO:0030234","GO:0005794","GO:0005829","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005634":null,"GO:0005737":null,"GO:0005795":null,"GO:0005829":null,"GO:0016192":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04548.1"],"transcripts_by_uniquename":{"SJAG_04548.1":null},"uniprot_identifier":"B6K744","uniquename":"SJAG_04548"}


id: SJAG_04549
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98289],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[98290],"is_not":false,"summary":null,"term":"GO:0070981"}],"cellular_component":[{"annotations":[98287],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98288],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98291],"is_not":false,"summary":null,"term":"GO:0004066"},{"annotations":[98292],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["InterPro:IPR029055","InterPro:IPR006426","UniProtKB/TrEMBL:B6K745","InterPro:IPR033738","GOA:B6K745","EnsemblGenomes-Gn:SJAG_04549","InterPro:IPR014729","EnsemblGenomes-Tr:EEB09349","InterPro:IPR017932","InterPro:IPR001962"],"deletion_viability":"unknown","disordered_region_coords":[[492,493],[495,502]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"},{"name":"dph6","uniquename":"SJAG_04544"}],"genes_by_uniquename":{"HGNC:753":null,"SJAG_04549":null,"SPBC119.10":null,"YGR124W":null,"YPR145W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":530,"score":0.0,"start":196}],"model":"1ct9B02","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.20.10","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":195,"score":0.0,"start":2}],"model":"1ct9A01","name":"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00733","interpro_id":"IPR001962","interpro_name":"Asparagine synthase","interpro_type":"Domain","locations":[{"end":374,"score":0.0,"start":214}],"model":"PF00733","name":"Asparagine synthase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13537","interpro_id":"IPR017932","interpro_name":"Glutamine amidotransferase type 2 domain","interpro_type":"Domain","locations":[{"end":168,"score":2.0000004306106665e-39,"start":48}],"model":"PF13537","name":"Glutamine amidotransferase domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001589","interpro_id":"IPR006426","interpro_name":"Asparagine synthase, glutamine-hydrolyzing","interpro_type":"Family","locations":[{"end":376,"score":0.0,"start":1},{"end":555,"score":6.000000019026461e-30,"start":369}],"model":"PIRSF001589","name":"Asparagine synthetase [glutamine-hydrolysing]"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51278","interpro_id":"IPR017932","interpro_name":"Glutamine amidotransferase type 2 domain","interpro_type":"Domain","locations":[{"end":188,"score":0.0,"start":2}],"model":"PS51278","name":"Glutamine amidotransferase type 2 domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11772","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":552,"score":0.0,"start":1}],"model":"PTHR11772:SF2","name":"ASPARAGINE SYNTHETASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":496,"score":0.0,"start":203}],"model":"0039538","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56235","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":198,"score":0.0,"start":1}],"model":"0039539","name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01536","interpro_id":"IPR006426","interpro_name":"Asparagine synthase, glutamine-hydrolyzing","interpro_type":"Family","locations":[{"end":380,"score":0.0,"start":2}],"model":"TIGR01536","name":"asparagine synthase (glutamine-hydrolyzing)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00712","interpro_id":"IPR033738","interpro_name":"Asparagine synthase, N-terminal domain","interpro_type":"Domain","locations":[{"end":195,"score":0.0,"start":2}],"model":"cd00712","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01991","interpro_id":"IPR001962","interpro_name":"Asparagine synthase","interpro_type":"Domain","locations":[{"end":472,"score":0.0,"start":215}],"model":"cd01991","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":645990,"start_pos":644314,"strand":"forward"},"low_complexity_region_coords":[[233,244]],"name":"asn1","ortholog_annotations":[{"gene_uniquename":"SJAG_04549","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:753","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04549","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04549","ortholog_taxonid":4932,"ortholog_uniquename":"YGR124W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04549","ortholog_taxonid":4932,"ortholog_uniquename":"YPR145W","reference_uniquename":"PMID:29761456"}],"product":"asparagine synthetase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0006520","GO:0016874"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004066":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0006529":null,"GO:0070981":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04549.1"],"transcripts_by_uniquename":{"SJAG_04549.1":null},"uniprot_identifier":"B6K745","uniquename":"SJAG_04549"}


id: SJAG_04550
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98284],"is_not":false,"summary":null,"term":"GO:0006672"},{"annotations":[98285],"is_not":false,"summary":null,"term":"GO:0090156"},{"annotations":[98286],"is_not":false,"summary":null,"term":"GO:0030148"}],"cellular_component":[{"annotations":[98281],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[98282],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[98283],"is_not":false,"summary":null,"term":"GO:0035339"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K746","InterPro:IPR007203","EnsemblGenomes-Gn:SJAG_04550","GOA:B6K746","EnsemblGenomes-Tr:EEB09350"],"deletion_viability":"unknown","disordered_region_coords":[[182,183],[185,188]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"},{"name":"syj2","uniquename":"SJAG_04545"}],"genes_by_uniquename":{"HGNC:16036":null,"HGNC:16037":null,"HGNC:16038":null,"SJAG_04550":null,"SPBC119.09c":null,"YGR038W":null,"YLR350W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04061","interpro_id":"IPR007203","interpro_name":"ORMDL family","interpro_type":"Family","locations":[{"end":167,"score":0.0,"start":33}],"model":"PF04061","name":"ORMDL family"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF018147","interpro_id":"IPR007203","interpro_name":"ORMDL family","interpro_type":"Family","locations":[{"end":182,"score":0.0,"start":1}],"model":"PIRSF018147","name":"Endoplasmic reticulum protein, Orm1 type"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12665","interpro_id":"IPR007203","interpro_name":"ORMDL family","interpro_type":"Family","locations":[{"end":173,"score":0.0,"start":27}],"model":"PTHR12665:SF7","name":"ORMDL PROTEINS"}],"location":{"chromosome_name":"supercont5.3","end_pos":643152,"start_pos":642487,"strand":"reverse"},"low_complexity_region_coords":[[44,57],[123,133]],"name":"orm1","ortholog_annotations":[{"gene_uniquename":"SJAG_04550","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16036","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04550","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16037","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04550","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16038","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04550","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04550","ortholog_taxonid":4932,"ortholog_uniquename":"YGR038W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04550","ortholog_taxonid":4932,"ortholog_uniquename":"YLR350W","reference_uniquename":"PMID:29761456"}],"product":"ORMDL family protein Orm1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005789","GO:0006629","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005789":null,"GO:0006672":null,"GO:0030148":null,"GO:0035339":null,"GO:0090156":null},"tm_domain_coords":[[37,59],[69,91],[122,139],[144,163]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04550.1"],"transcripts_by_uniquename":{"SJAG_04550.1":null},"uniprot_identifier":"B6K746","uniquename":"SJAG_04550"}


id: SJAG_04551
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"cv_annotations":{"PSI-MOD":[{"annotations":[115233,115234,115235],"is_not":false,"summary":null,"term":"MOD:00696"}],"biological_process":[{"annotations":[98271],"is_not":false,"summary":null,"term":"GO:0000196"},{"annotations":[62027],"is_not":false,"summary":null,"term":"GO:0000165"},{"annotations":[98272],"is_not":false,"summary":null,"term":"GO:1902660"},{"annotations":[98273],"is_not":false,"summary":null,"term":"GO:1902413"},{"annotations":[98274],"is_not":false,"summary":null,"term":"GO:1905665"},{"annotations":[98275],"is_not":false,"summary":null,"term":"GO:0050850"},{"annotations":[98276],"is_not":false,"summary":null,"term":"GO:1903340"},{"annotations":[98277],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[98278],"is_not":false,"summary":null,"term":"GO:1903338"}],"cellular_component":[{"annotations":[98266],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[98267,115232],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[98268],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98269],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[98270,115231],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98279],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[98280],"is_not":false,"summary":null,"term":"GO:0004707"}],"multi_locus_phenotype":[{"annotations":[115249],"is_not":false,"summary":null,"term":"FYPO:0007780"}],"single_locus_phenotype":[{"annotations":[115255],"is_not":false,"summary":null,"term":"FYPO:0002678"},{"annotations":[115254],"is_not":false,"summary":null,"term":"FYPO:0002033"},{"annotations":[115236,115252,115257,115260],"is_not":false,"summary":null,"term":"FYPO:0007776"},{"annotations":[115237,115253,115258,115261],"is_not":false,"summary":null,"term":"FYPO:0007780"},{"annotations":[115250],"is_not":false,"summary":null,"term":"FYPO:0001838"},{"annotations":[115228],"is_not":false,"summary":null,"term":"FYPO:0004295"},{"annotations":[115230,115251,115256,115259],"is_not":false,"summary":null,"term":"FYPO:0007521"},{"annotations":[115229],"is_not":false,"summary":null,"term":"FYPO:0000079"},{"annotations":[115371],"is_not":false,"summary":null,"term":"FYPO:0000124"}]},"dbxrefs":["GOA:B6K747","InterPro:IPR000719","EnsemblGenomes-Tr:EEB09351","EnsemblGenomes-Gn:SJAG_04551","InterPro:IPR008271","InterPro:IPR011009","InterPro:IPR017441","UniProtKB/TrEMBL:B6K747"],"deletion_viability":"unknown","disordered_region_coords":[[333,334],[340,406]],"feature_publications":[{"reference_uniquename":"PMID:34198697","source":"canto"},{"reference_uniquename":"PMID:29566183","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"},{"name":"spa1","uniquename":"SJAG_04546"}],"genes_by_uniquename":{"HGNC:6880":null,"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null,"SPBC119.08":null,"YHR030C":null},"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck1delta__pmk1delta":{"display_name":"pck1delta pmk1delta","display_uniquename":"pck1delta__pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":303,"score":0.0,"start":87}],"model":"3ohtA02","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":328,"score":0.0,"start":20}],"model":"3ohtA01","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":290,"score":0.0,"start":85}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":53,"score":0.0,"start":27}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":133,"score":0.0,"start":121}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":290,"score":0.0,"start":21}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24055","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":343,"score":0.0,"start":22}],"model":"PTHR24055:SF561","name":"MITOGEN-ACTIVATED PROTEIN KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":290,"score":0.0,"start":21}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":298,"score":0.0,"start":15}],"model":"0054833","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07857","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":327,"score":0.0,"start":20}],"model":"cd07857","name":"Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1"}],"location":{"chromosome_name":"supercont5.3","end_pos":641711,"start_pos":639967,"strand":"forward"},"name":"pmk1","ortholog_annotations":[{"gene_uniquename":"SJAG_04551","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6880","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04551","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04551","ortholog_taxonid":4932,"ortholog_uniquename":"YHR030C","reference_uniquename":"PMID:29761456"}],"product":"MAP kinase Pmk1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29566183":null,"PMID:29761456":null,"PMID:34198697":null},"subset_termids":["FYPO:0001320","FYPO:0002682","GO:0140096","FYPO:0002683","FYPO:0002274","GO:0006355","GO:0015630","FYPO:0000139","GO:0005634","GO:0055085","GO:0005816","FYPO:0002494","GO:0016301","GO:0000281","GO:0023052","GO:0006351","GO:0004672","GO:0071554","GO:0005829"],"target_of_annotations":[{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_01787","genotype_uniquename":"pck1delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:34198697","show_in_summary":true},{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_00610","genotype_uniquename":"pck2delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:34198697","show_in_summary":true},{"ext_rel_display_name":"affected by mutation in","gene":"SJAG_02592","genotype_uniquename":"sty1delta","ontology_name":"fission_yeast_phenotype","reference_uniquename":"PMID:34198697","show_in_summary":true}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000207":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000124":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0004295":null,"FYPO:0007521":null,"FYPO:0007776":null,"FYPO:0007780":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000165":null,"GO:0000196":null,"GO:0004707":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0032153":null,"GO:0036460":null,"GO:0042149":null,"GO:0044732":null,"GO:0045944":null,"GO:0050850":null,"GO:0071475":null,"GO:0072690":null,"GO:1902413":null,"GO:1902660":null,"GO:1903338":null,"GO:1903340":null,"GO:1905665":null,"MOD:00696":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04551.1"],"transcripts_by_uniquename":{"SJAG_04551.1":null},"uniprot_identifier":"B6K747","uniquename":"SJAG_04551"}


id: SJAG_04552
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98258],"is_not":false,"summary":null,"term":"GO:0030242"},{"annotations":[98259],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[98260],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[98261],"is_not":false,"summary":null,"term":"GO:0006623"},{"annotations":[98262],"is_not":false,"summary":null,"term":"GO:0042147"},{"annotations":[98263],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[98254],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[98255],"is_not":false,"summary":null,"term":"GO:0071561"},{"annotations":[98256],"is_not":false,"summary":null,"term":"GO:0034271"},{"annotations":[98257],"is_not":false,"summary":null,"term":"GO:0034272"}],"molecular_function":[{"annotations":[98264],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[98265],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04552","EnsemblGenomes-Tr:EEB09352","GOA:B6K748","InterPro:IPR000719","InterPro:IPR008271","InterPro:IPR011009","InterPro:IPR036322","InterPro:IPR011989","InterPro:IPR016024","InterPro:IPR021133","UniProtKB/TrEMBL:B6K748"],"deletion_viability":"unknown","disordered_region_coords":[[971,988],[1049,1071],[1470,1479]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"},{"name":"sim3","uniquename":"SJAG_04547"}],"genes_by_uniquename":{"HGNC:8982":null,"SJAG_04552":null,"SPBC119.07":null,"YBR097W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":360,"score":6.099999923274456e-36,"start":79}],"model":"4bkyA00","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":611,"score":1.1999999518369497e-12,"start":446},{"end":817,"score":3.099999979481495e-15,"start":624}],"model":"3c5wA00","name":"Leucine-rich Repeat Variant"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1538,"score":5.09999986686438e-10,"start":1047}],"model":"4ci8A01","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":346,"score":7.300000179630669e-27,"start":86}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":215,"score":0.0,"start":203}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":366,"score":0.0,"start":86}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50077","interpro_id":"IPR021133","interpro_name":"HEAT, type 2","interpro_type":"Repeat","locations":[{"end":601,"score":0.0,"start":563}],"model":"PS50077","name":"HEAT repeat profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR17583","interpro_id":"IPR045162","interpro_name":"Serine/threonine-protein kinase Vps15-like","interpro_type":"Family","locations":[{"end":1537,"score":0.0,"start":63}],"model":"PTHR17583:SF0","name":"PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":354,"score":1.8000000361756419e-13,"start":86}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":815,"score":1.5399999961554128e-33,"start":335}],"model":"0045874","name":"ARM repeat"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1537,"score":8.140000175640982e-14,"start":1088}],"model":"0047761","name":"WD40 repeat-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":351,"score":5.330539358291604e-42,"start":83}],"model":"0046180","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13980","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":358,"score":0.0,"start":85}],"model":"cd13980","name":"Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15"}],"location":{"chromosome_name":"supercont5.3","end_pos":639356,"start_pos":634574,"strand":"forward"},"low_complexity_region_coords":[[496,507],[871,881],[1213,1224]],"name":"vps15","ortholog_annotations":[{"gene_uniquename":"SJAG_04552","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8982","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04552","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04552","ortholog_taxonid":4932,"ortholog_uniquename":"YBR097W","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase Vps15","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0006914","GO:0004672","GO:0031410","GO:0023052","GO:0016301","GO:0140096","GO:0005768","GO:0006605"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005770":null,"GO:0006623":null,"GO:0016236":null,"GO:0023052":null,"GO:0030242":null,"GO:0034271":null,"GO:0034272":null,"GO:0042147":null,"GO:0045324":null,"GO:0071561":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04552.1"],"transcripts_by_uniquename":{"SJAG_04552.1":null},"uniprot_identifier":"B6K748","uniquename":"SJAG_04552"}


id: SJAG_04553
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98250],"is_not":false,"summary":null,"term":"GO:0033617"},{"annotations":[98251],"is_not":false,"summary":null,"term":"GO:0015680"}],"cellular_component":[{"annotations":[98249],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[59765],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[98252],"is_not":false,"summary":null,"term":"GO:0016531"},{"annotations":[98253],"is_not":false,"summary":null,"term":"GO:0005507"}]},"dbxrefs":["GOA:B6K749","EnsemblGenomes-Tr:EEB09353","EnsemblGenomes-Gn:SJAG_04553","InterPro:IPR017276","InterPro:IPR036249","InterPro:IPR003782","UniProtKB/TrEMBL:B6K749"],"deletion_viability":"unknown","disordered_region_coords":[[18,19],[25,25],[64,65],[90,119],[172,175],[68,67]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"},{"name":"gyp1","uniquename":"SJAG_04548"}],"genes_by_uniquename":{"HGNC:10603":null,"HGNC:10604":null,"SJAG_04553":null,"SPBC119.06":null,"YBR024W":null,"YBR037C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":352,"score":0.0,"start":175}],"model":"2b7kA00","name":"Glutaredoxin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02630","interpro_id":"IPR003782","interpro_name":"Copper chaperone SCO1/SenC","interpro_type":"Family","locations":[{"end":328,"score":1.8216880036222622e-44,"start":191}],"model":"PF02630","name":"SCO1/SenC"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12151","interpro_id":"IPR003782","interpro_name":"Copper chaperone SCO1/SenC","interpro_type":"Family","locations":[{"end":349,"score":0.0,"start":102}],"model":"PTHR12151:SF5","name":"ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52833","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":351,"score":0.0,"start":190}],"model":"0051931","name":"Thioredoxin-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02968","interpro_id":"IPR003782","interpro_name":"Copper chaperone SCO1/SenC","interpro_type":"Family","locations":[{"end":333,"score":0.0,"start":190}],"model":"cd02968","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":634078,"start_pos":633005,"strand":"forward"},"low_complexity_region_coords":[[13,24],[35,55],[68,89],[120,131],[162,171],[176,187]],"name":"sco1","ortholog_annotations":[{"gene_uniquename":"SJAG_04553","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10603","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04553","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10604","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04553","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04553","ortholog_taxonid":4932,"ortholog_uniquename":"YBR024W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04553","ortholog_taxonid":4932,"ortholog_uniquename":"YBR037C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0007005","GO:0051604","GO:0140104","GO:0065003","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005507":null,"GO:0005739":null,"GO:0005743":null,"GO:0015680":null,"GO:0016531":null,"GO:0033617":null},"tm_domain_coords":[[142,161]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04553.1"],"transcripts_by_uniquename":{"SJAG_04553.1":null},"uniprot_identifier":"B6K749","uniquename":"SJAG_04553"}


id: SJAG_04554
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98247],"is_not":false,"summary":null,"term":"GO:0030036"},{"annotations":[98248],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[98243],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[98244,98245],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[98246],"is_not":false,"summary":null,"term":"GO:0005829"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09354","EnsemblGenomes-Gn:SJAG_04554","InterPro:IPR001452","InterPro:IPR036028","UniProtKB/TrEMBL:B6K750"],"deletion_viability":"unknown","disordered_region_coords":[[1,1],[39,41],[44,50],[116,117],[120,122],[135,148],[88,93]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"},{"name":"asn1","uniquename":"SJAG_04549"}],"genes_by_uniquename":{"HGNC:4562":null,"HGNC:4563":null,"HGNC:4566":null,"SJAG_04554":null,"SPBC119.05c":null,"YGR136W":null,"YPR154W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":84,"score":5.600000125209514e-22,"start":16}],"model":"3c0cA00","name":"SH3 Domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00018","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":75,"score":3.5000000656357872e-15,"start":30}],"model":"PF00018","name":"SH3 domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00452","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":37,"score":9.099999920270108e-11,"start":27},{"end":56,"score":9.099999920270108e-11,"start":41},{"end":67,"score":9.099999920270108e-11,"start":58},{"end":81,"score":9.099999920270108e-11,"start":69}],"model":"PR00452","name":""},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01887","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":45,"score":2.4000000848900527e-6,"start":26},{"end":60,"score":2.4000000848900527e-6,"start":46},{"end":82,"score":2.4000000848900527e-6,"start":61}],"model":"PR01887","name":"Spectrin alpha chain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50002","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":83,"score":0.0,"start":24}],"model":"PS50002","name":"Src homology 3 (SH3) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45929","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":84,"score":4.3999999120670875e-18,"start":9}],"model":"PTHR45929:SF7","name":"JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00326","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":82,"score":5.2999998318072695e-21,"start":27}],"model":"SM00326","name":"Src homology 3 domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50044","interpro_id":"IPR036028","interpro_name":"SH3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":105,"score":7.610000143780293e-25,"start":15}],"model":"0041374","name":"SH3-domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":632195,"start_pos":631668,"strand":"reverse"},"low_complexity_region_coords":[[2,25],[94,115],[116,134],[157,168]],"name":"lsb1","ortholog_annotations":[{"gene_uniquename":"SJAG_04554","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4562","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04554","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4563","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04554","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4566","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04554","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04554","ortholog_taxonid":4932,"ortholog_uniquename":"YGR136W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04554","ortholog_taxonid":4932,"ortholog_uniquename":"YPR154W","reference_uniquename":"PMID:29761456"}],"product":"Wiskott-Aldrich syndrome homolog binding protein Lsb1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030036","GO:0016192","GO:0005829","GO:0005938"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0005829":null,"GO:0005938":null,"GO:0006897":null,"GO:0030036":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04554.1"],"transcripts_by_uniquename":{"SJAG_04554.1":null},"uniprot_identifier":"B6K750","uniquename":"SJAG_04554"}


id: SJAG_04555
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04555","UniProtKB/TrEMBL:B6K751","EnsemblGenomes-Tr:EEB09355"],"deletion_viability":"unknown","disordered_region_coords":[[1,24],[30,34],[55,101],[105,106],[38,40]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"},{"name":"orm1","uniquename":"SJAG_04550"}],"genes_by_uniquename":{"SJAG_04555":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":630879,"start_pos":630505,"strand":"forward"},"low_complexity_region_coords":[[41,54]],"product":"candidate S. pombe Mei3 ortholog, syntenic position, intrinsically disordered protein","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04555.1"],"transcripts_by_uniquename":{"SJAG_04555.1":null},"uniprot_identifier":"B6K751","uniquename":"SJAG_04555"}


id: SJAG_04557
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB09356","UniProtKB/TrEMBL:B6K752","EnsemblGenomes-Gn:SJAG_04557"],"deletion_viability":"unknown","disordered_region_coords":[[38,39],[44,48],[106,110],[186,197],[199,204],[227,235],[237,270],[292,295],[300,304],[308,309],[313,316],[329,330],[340,347],[352,363],[382,400],[159,167]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"},{"name":"pmk1","uniquename":"SJAG_04551"}],"genes_by_uniquename":{"SJAG_04557":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":629428,"start_pos":628178,"strand":"reverse"},"low_complexity_region_coords":[[19,23],[29,43],[115,126],[168,185],[337,351],[365,381]],"product":"Schizosaccharomyces japonicus specific protein","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_04557.1"],"transcripts_by_uniquename":{"SJAG_04557.1":null},"uniprot_identifier":"B6K752","uniquename":"SJAG_04557"}


id: SJAG_04558
data:
  {"coiled_coil_coords":[[174,222],[251,285],[289,309]],"cv_annotations":{"biological_process":[{"annotations":[108967],"is_not":false,"summary":null,"term":"GO:1903087"},{"annotations":[108968],"is_not":false,"summary":null,"term":"GO:0140480"}],"cellular_component":[{"annotations":[108961],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[108962],"is_not":false,"summary":null,"term":"GO:0061496"},{"annotations":[108963],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[108964],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[108965],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[108966],"is_not":false,"summary":null,"term":"GO:0071957"}],"molecular_function":[{"annotations":[108969],"is_not":false,"summary":null,"term":"GO:0106166"}]},"dbxrefs":["GOA:B6K753","UniProtKB/TrEMBL:B6K753","EnsemblGenomes-Tr:EEB09357","EnsemblGenomes-Gn:SJAG_04558"],"deletion_viability":"unknown","disordered_region_coords":[[86,102],[117,118],[126,173],[189,194],[199,208],[231,232],[236,248],[279,280],[286,288],[327,331]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"},{"name":"vps15","uniquename":"SJAG_04552"}],"genes_by_uniquename":{"HGNC:26703":null,"SJAG_04558":null,"SPBC947.12":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":627627,"start_pos":626156,"strand":"reverse"},"low_complexity_region_coords":[[268,279]],"name":"kms2","ortholog_annotations":[{"gene_uniquename":"SJAG_04558","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26703","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04558","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.12","reference_uniquename":"PMID:21511999"}],"product":"mitotic and meiotic spindle pole body KASH domain protein Kms2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0000226","GO:0060090","GO:0015630","GO:0005816","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0034993":null,"GO:0044732":null,"GO:0061496":null,"GO:0071957":null,"GO:0106166":null,"GO:0140480":null,"GO:1903087":null},"tm_domain_coords":[[419,441]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04558.1"],"transcripts_by_uniquename":{"SJAG_04558.1":null},"uniprot_identifier":"B6K753","uniquename":"SJAG_04558"}


id: SJAG_04559
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108973],"is_not":false,"summary":null,"term":"GO:0006366"}],"cellular_component":[{"annotations":[108970],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108971],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[108972],"is_not":false,"summary":null,"term":"GO:0005665"}]},"dbxrefs":["InterPro:IPR013930","UniProtKB/TrEMBL:B6K754","InterPro:IPR013929","EnsemblGenomes-Gn:SJAG_04559","InterPro:IPR039913","GOA:B6K754","EnsemblGenomes-Tr:EEB09358"],"deletion_viability":"unknown","disordered_region_coords":[[1,4],[6,7],[12,13],[18,76],[106,107],[109,110],[123,178],[180,224],[227,232],[234,235],[238,240],[266,269],[275,277],[302,312],[413,415]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"},{"name":"sco1","uniquename":"SJAG_04553"}],"genes_by_uniquename":{"HGNC:24567":null,"SJAG_04559":null,"SPBC947.13":null,"YDR527W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08620","interpro_id":"IPR013929","interpro_name":"RNA polymerase II-associated protein 1, C-terminal","interpro_type":"Domain","locations":[{"end":353,"score":1.0000000031710769e-28,"start":286}],"model":"PF08620","name":"RPAP1-like, C-terminal"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08621","interpro_id":"IPR013930","interpro_name":"RNA polymerase II-associated protein 1, N-terminal","interpro_type":"Domain","locations":[{"end":121,"score":1.700000004049157e-13,"start":77}],"model":"PF08621","name":"RPAP1-like, N-terminal"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21483","interpro_id":"IPR039913","interpro_name":"RNA polymerase II-associated protein RPAP1/Rba50","interpro_type":"Family","locations":[{"end":400,"score":3.993700623325729e-43,"start":14}],"model":"PTHR21483:SF18","name":"RNA POLYMERASE II-ASSOCIATED PROTEIN 1"}],"location":{"chromosome_name":"supercont5.3","end_pos":625786,"start_pos":624539,"strand":"reverse"},"name":"rba50","ortholog_annotations":[{"gene_uniquename":"SJAG_04559","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24567","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04559","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04559","ortholog_taxonid":4932,"ortholog_uniquename":"YDR527W","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase II associated protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829","GO:0005654","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005665":null,"GO:0005829":null,"GO:0006366":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04559.1"],"transcripts_by_uniquename":{"SJAG_04559.1":null},"uniprot_identifier":"B6K754","uniquename":"SJAG_04559"}


id: SJAG_04560
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108977],"is_not":false,"summary":null,"term":"GO:0034551"}],"cellular_component":[{"annotations":[108974],"is_not":false,"summary":null,"term":"GO:0061671"},{"annotations":[108975],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[108976],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[108978],"is_not":false,"summary":null,"term":"GO:0043022"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09359","GOA:B6K755","UniProtKB/TrEMBL:B6K755","InterPro:IPR037653","EnsemblGenomes-Gn:SJAG_04560"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"},{"name":"lsb1","uniquename":"SJAG_04554"}],"genes_by_uniquename":{"HGNC:21237":null,"SJAG_04560":null,"SPBC947.14c":null,"YBR120C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20180","interpro_id":"IPR046827","interpro_name":"Complex III assembly factor UQCC2/CBP6","interpro_type":"Family","locations":[{"end":82,"score":3.8999999408590233e-19,"start":4}],"model":"PF20180","name":"Complex III assembly factor UQCC2/CBP6"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28250","interpro_id":"IPR037653","interpro_name":"Cytochrome B pre-mRNA-processing protein 6","interpro_type":"Family","locations":[{"end":94,"score":1.1999999620013451e-14,"start":4}],"model":"PTHR28250:SF1","name":"CYTOCHROME B PRE-MRNA-PROCESSING PROTEIN 6"}],"location":{"chromosome_name":"supercont5.3","end_pos":624268,"start_pos":623893,"strand":"forward"},"name":"cbp6","ortholog_annotations":[{"gene_uniquename":"SJAG_04560","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21237","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04560","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04560","ortholog_taxonid":4932,"ortholog_uniquename":"YBR120C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial complex III assembly protein Cbp6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0007005","GO:0065003","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005759":null,"GO:0034551":null,"GO:0043022":null,"GO:0061671":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04560.1"],"transcripts_by_uniquename":{"SJAG_04560.1":null},"uniprot_identifier":"B6K755","uniquename":"SJAG_04560"}


id: SJAG_04561
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108933],"is_not":false,"summary":null,"term":"GO:0006325"}],"cellular_component":[{"annotations":[108930],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[108931],"is_not":false,"summary":null,"term":"GO:0000417"},{"annotations":[108932],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[108934],"is_not":false,"summary":null,"term":"GO:0000510"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04561","InterPro:IPR014840","EnsemblGenomes-Tr:EEB09360","GOA:B6K756","UniProtKB/TrEMBL:B6K756"],"deletion_viability":"unknown","disordered_region_coords":[[60,76],[103,105],[145,179],[27,42],[129,128]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"},{"uniquename":"SJAG_04555"}],"genes_by_uniquename":{"HGNC:12506":null,"SJAG_04561":null,"SPBC947.08c":null,"YBR215W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08729","interpro_id":"IPR014840","interpro_name":"Hpc2-related domain","interpro_type":"Domain","locations":[{"end":123,"score":2.2000000043931323e-8,"start":79}],"model":"PF08729","name":"HPC2 and ubinuclein domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":623273,"start_pos":622734,"strand":"reverse"},"low_complexity_region_coords":[[43,59],[80,86],[129,144]],"name":"hip4","ortholog_annotations":[{"gene_uniquename":"SJAG_04561","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12506","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04561","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04561","ortholog_taxonid":4932,"ortholog_uniquename":"YBR215W","reference_uniquename":"PMID:29761456"}],"product":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006325","GO:0140104","GO:0005694","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000417":null,"GO:0000510":null,"GO:0000785":null,"GO:0005634":null,"GO:0006325":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04561.1"],"transcripts_by_uniquename":{"SJAG_04561.1":null},"uniprot_identifier":"B6K756","uniquename":"SJAG_04561"}


id: SJAG_04562
data:
  {"coiled_coil_coords":[[39,69],[134,154],[185,225]],"cv_annotations":{"biological_process":[{"annotations":[108926],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[108927],"is_not":false,"summary":null,"term":"GO:0042274"}],"cellular_component":[{"annotations":[108925],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[108928],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[108929],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR007019","EnsemblGenomes-Tr:EEB09361","EnsemblGenomes-Gn:SJAG_04562","InterPro:IPR029190","UniProtKB/TrEMBL:B6K757"],"deletion_viability":"unknown","disordered_region_coords":[[1,4],[15,17],[19,23],[27,31],[45,70],[80,84],[114,119],[121,134],[139,150],[240,243],[231,230]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"},{"uniquename":"SJAG_04557"}],"genes_by_uniquename":{"HGNC:11478":null,"SJAG_04562":null,"SPBC947.07":null,"YKL082C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04935","interpro_id":"IPR029190","interpro_name":"Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain","interpro_type":"Domain","locations":[{"end":230,"score":7.006492321624085e-45,"start":32}],"model":"PF04935","name":"Surfeit locus protein 6"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14369","interpro_id":"IPR007019","interpro_name":"Surfeit locus 6","interpro_type":"Family","locations":[{"end":242,"score":6.69960795793695e-42,"start":5}],"model":"PTHR14369:SF0","name":"SURFEIT LOCUS PROTEIN 6"}],"location":{"chromosome_name":"supercont5.3","end_pos":622566,"start_pos":621835,"strand":"forward"},"low_complexity_region_coords":[[35,54],[112,123],[178,197],[231,239]],"name":"rrp1402","ortholog_annotations":[{"gene_uniquename":"SJAG_04562","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11478","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04562","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04562","ortholog_taxonid":4932,"ortholog_uniquename":"YKL082C","reference_uniquename":"PMID:29761456"}],"product":"ribosome biogenesis protein Rrp14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0042254","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0003723":null,"GO:0005730":null,"GO:0042273":null,"GO:0042274":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04562.1"],"transcripts_by_uniquename":{"SJAG_04562.1":null},"uniprot_identifier":"B6K757","uniquename":"SJAG_04562"}


id: SJAG_04563
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[110469],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110470],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[110471],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["GOA:B6K758","EnsemblGenomes-Gn:SJAG_04563","EnsemblGenomes-Tr:EEB09362","InterPro:IPR036069","InterPro:IPR002678","UniProtKB/TrEMBL:B6K758"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"},{"name":"rba50","uniquename":"SJAG_04559"},{"name":"kms2","uniquename":"SJAG_04558"}],"genes_by_uniquename":{"HGNC:13390":null,"SJAG_04563":null,"SPCC126.12":null,"YGL221C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.1390.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":121,"score":3.199999971512253e-36,"start":5}],"model":"2fywC01","name":"NIF3 (NGG1p interacting factor 3)-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01784","interpro_id":"IPR002678","interpro_name":"DUF34/NIF3","interpro_type":"Family","locations":[{"end":253,"score":0.0,"start":8}],"model":"PF01784","name":"NIF3 (NGG1p interacting factor 3)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13799","interpro_id":"IPR002678","interpro_name":"DUF34/NIF3","interpro_type":"Family","locations":[{"end":277,"score":0.0,"start":7}],"model":"PTHR13799:SF13","name":"NGG1 INTERACTING FACTOR 3"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF102705","interpro_id":"IPR036069","interpro_name":"DUF34/NIF3 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":276,"score":0.0,"start":8}],"model":"0052969","name":"NIF3 (NGG1p interacting factor 3)-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00486","interpro_id":"IPR002678","interpro_name":"DUF34/NIF3","interpro_type":"Family","locations":[{"end":248,"score":0.0,"start":8}],"model":"TIGR00486","name":"Nif3-like dinuclear metal center hexameric protein"}],"location":{"chromosome_name":"supercont5.3","end_pos":621381,"start_pos":620299,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04563","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13390","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04563","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC126.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04563","ortholog_taxonid":4932,"ortholog_uniquename":"YGL221C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04563.1"],"transcripts_by_uniquename":{"SJAG_04563.1":null},"uniprot_identifier":"B6K758","uniquename":"SJAG_04563"}


id: SJAG_04565
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108910],"is_not":false,"summary":null,"term":"GO:0099638"},{"annotations":[108911],"is_not":false,"summary":null,"term":"GO:0042147"}],"cellular_component":[{"annotations":[108906],"is_not":false,"summary":null,"term":"GO:0030121"},{"annotations":[108907],"is_not":false,"summary":null,"term":"GO:0005905"},{"annotations":[60201,60202],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108908],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[108909],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[108912],"is_not":false,"summary":null,"term":"GO:0035615"},{"annotations":[60198],"is_not":false,"summary":null,"term":"GO:0030276"}]},"dbxrefs":["InterPro:IPR016342","InterPro:IPR011989","GOA:B6K759","InterPro:IPR002553","InterPro:IPR026739","EnsemblGenomes-Gn:SJAG_04565","EnsemblGenomes-Tr:EEB09363","UniProtKB/TrEMBL:B6K759","InterPro:IPR016024"],"deletion_viability":"unknown","disordered_region_coords":[[604,619],[679,684],[628,631],[647,655]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"},{"name":"cbp6","uniquename":"SJAG_04560"}],"genes_by_uniquename":{"HGNC:554":null,"HGNC:563":null,"SJAG_04565":null,"SPBC947.02":null,"YKL135C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":592,"score":0.0,"start":14}],"model":"1gw5B00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01602","interpro_id":"IPR002553","interpro_name":"Clathrin/coatomer adaptor, adaptin-like, N-terminal","interpro_type":"Domain","locations":[{"end":540,"score":0.0,"start":22}],"model":"PF01602","name":"Adaptin N terminal region"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF002291","interpro_id":"IPR016342","interpro_name":"AP-1/2/4 complex subunit beta","interpro_type":"Family","locations":[{"end":683,"score":0.0,"start":6}],"model":"PIRSF002291","name":"Adaptor protein complex, beta subunit"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11134","interpro_id":"IPR026739","interpro_name":"AP complex subunit beta","interpro_type":"Family","locations":[{"end":676,"score":0.0,"start":20}],"model":"PTHR11134:SF3","name":"ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":587,"score":0.0,"start":22}],"model":"0038302","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":619309,"start_pos":617143,"strand":"forward"},"low_complexity_region_coords":[[486,502],[632,646],[656,678]],"name":"apl2","ortholog_annotations":[{"gene_uniquename":"SJAG_04565","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:554","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04565","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:563","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04565","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04565","ortholog_taxonid":4932,"ortholog_uniquename":"YKL135C","reference_uniquename":"PMID:29761456"}],"product":"AP-1 adaptor complex beta subunit Apl2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0060090","GO:0005829","GO:0005794","GO:0005768","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005768":null,"GO:0005794":null,"GO:0005829":null,"GO:0005905":null,"GO:0030121":null,"GO:0030276":null,"GO:0035615":null,"GO:0042147":null,"GO:0099638":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04565.1"],"transcripts_by_uniquename":{"SJAG_04565.1":null},"uniprot_identifier":"B6K759","uniquename":"SJAG_04565"}


id: SJAG_04566
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108901],"is_not":false,"summary":null,"term":"GO:0001578"},{"annotations":[108902],"is_not":false,"summary":null,"term":"GO:0051013"}],"cellular_component":[{"annotations":[108895],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[108896],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[108897],"is_not":false,"summary":null,"term":"GO:0036391"},{"annotations":[108898],"is_not":false,"summary":null,"term":"GO:0035841"},{"annotations":[108899],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[108900],"is_not":false,"summary":null,"term":"GO:0035840"}],"molecular_function":[{"annotations":[108903],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[108904],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[108905],"is_not":false,"summary":null,"term":"GO:0008568"}]},"dbxrefs":["InterPro:IPR027417","InterPro:IPR041569","InterPro:IPR003593","UniProtKB/TrEMBL:B6K760","EnsemblGenomes-Gn:SJAG_04566","InterPro:IPR003960","InterPro:IPR015415","InterPro:IPR003959","GOA:B6K760","EnsemblGenomes-Tr:EEB09364"],"deletion_viability":"unknown","disordered_region_coords":[[39,40],[117,118],[166,169],[175,186],[192,196],[240,239],[395,406],[528,529],[532,533],[688,689],[692,693],[207,219],[265,285],[302,310],[335,340],[362,361],[376,376]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"},{"name":"hip4","uniquename":"SJAG_04561"}],"genes_by_uniquename":{"HGNC:11233":null,"HGNC:13286":null,"SJAG_04566":null,"SPBC947.01":null,"YER047C":null,"YPL074W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":677,"score":0.0,"start":595}],"model":"4l15A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":693,"score":0.0,"start":416}],"model":"4l15A01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00004","interpro_id":"IPR003959","interpro_name":"ATPase, AAA-type, core","interpro_type":"Domain","locations":[{"end":593,"score":6.000000170793228e-38,"start":456}],"model":"PF00004","name":"ATPase family associated with various cellular activities (AAA)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09336","interpro_id":"IPR015415","interpro_name":"Spastin/Vps4, C-terminal","interpro_type":"Domain","locations":[{"end":697,"score":2.699999868127634e-7,"start":663}],"model":"PF09336","name":"Vps4 C terminal oligomerisation domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF17862","interpro_id":"IPR041569","interpro_name":"AAA ATPase, AAA+ lid domain","interpro_type":"Domain","locations":[{"end":652,"score":3.699999950868005e-8,"start":617}],"model":"PF17862","name":"AAA+ lid domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00674","interpro_id":"IPR003960","interpro_name":"ATPase, AAA-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":585,"score":0.0,"start":566}],"model":"PS00674","name":"AAA-protein family signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23074","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":698,"score":0.0,"start":336}],"model":"PTHR23074:SF169","name":"AAA DOMAIN-CONTAINING"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00382","interpro_id":"IPR003593","interpro_name":"AAA+ ATPase domain","interpro_type":"Domain","locations":[{"end":596,"score":1.3000000285385435e-17,"start":452}],"model":"SM00382","name":"ATPases associated with a variety of cellular activities"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":696,"score":0.0,"start":415}],"model":"0042094","name":"P-loop containing nucleoside triphosphate hydrolases"}],"location":{"chromosome_name":"supercont5.3","end_pos":616243,"start_pos":614079,"strand":"forward"},"low_complexity_region_coords":[[20,23],[144,157],[220,239],[286,301],[311,334],[341,361],[362,375],[377,394]],"name":"knk1","ortholog_annotations":[{"gene_uniquename":"SJAG_04566","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11233","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04566","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13286","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04566","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC947.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04566","ortholog_taxonid":4932,"ortholog_uniquename":"YER047C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04566","ortholog_taxonid":4932,"ortholog_uniquename":"YPL074W","reference_uniquename":"PMID:29761456"}],"product":"AAA family ATPase kink, Knk1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005938","GO:0016887","GO:0005634","GO:0000226","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001578":null,"GO:0005524":null,"GO:0005634":null,"GO:0008568":null,"GO:0016887":null,"GO:0032153":null,"GO:0035840":null,"GO:0035841":null,"GO:0036391":null,"GO:0051013":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04566.1"],"transcripts_by_uniquename":{"SJAG_04566.1":null},"uniprot_identifier":"B6K760","uniquename":"SJAG_04566"}


id: SJAG_04567
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106136],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[106138],"is_not":false,"summary":null,"term":"GO:0071218"},{"annotations":[106140],"is_not":false,"summary":null,"term":"GO:0034620"},{"annotations":[106142],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[106128],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[106130],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106132],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[106134],"is_not":false,"summary":null,"term":"GO:0140453"}],"molecular_function":[{"annotations":[106144],"is_not":false,"summary":null,"term":"GO:0044183"}]},"dbxrefs":["InterPro:IPR031107","UniProtKB/TrEMBL:B6K761","InterPro:IPR008978","InterPro:IPR002068","EnsemblGenomes-Tr:EEB09365","EnsemblGenomes-Gn:SJAG_04567"],"deletion_viability":"unknown","disordered_region_coords":[[33,36],[73,77],[79,84],[86,88]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"},{"name":"rrp1402","uniquename":"SJAG_04562"}],"genes_by_uniquename":{"HGNC:2388":null,"HGNC:2389":null,"HGNC:26511":null,"HGNC:30171":null,"HGNC:5246":null,"HGNC:5247":null,"HGNC:5248":null,"SJAG_04567":null,"SPBC3E7.02c":null,"YBR072W":null,"YDR171W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.790","interpro_id":"IPR008978","interpro_name":"HSP20-like chaperone","interpro_type":"Homologous_superfamily","locations":[{"end":138,"score":4.00000646641519e-40,"start":7}],"model":"3w1zC00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00011","interpro_id":"IPR002068","interpro_name":"Alpha crystallin/Hsp20 domain","interpro_type":"Domain","locations":[{"end":137,"score":6.5000000777158224e-24,"start":39}],"model":"PF00011","name":"Hsp20/alpha crystallin family"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS01031","interpro_id":"IPR002068","interpro_name":"Alpha crystallin/Hsp20 domain","interpro_type":"Domain","locations":[{"end":138,"score":0.0,"start":28}],"model":"PS01031","name":"Small heat shock protein (sHSP) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11527","interpro_id":"IPR031107","interpro_name":"Small heat shock protein","interpro_type":"Family","locations":[{"end":137,"score":6.000000314464115e-23,"start":25}],"model":"PTHR11527:SF175","name":"HEAT-SHOCK PROTEIN 20 FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49764","interpro_id":"IPR008978","interpro_name":"HSP20-like chaperone","interpro_type":"Homologous_superfamily","locations":[{"end":137,"score":1.4399999737280485e-37,"start":12}],"model":"0047015","name":"HSP20-like chaperones"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06464","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":126,"score":1.294160064727416e-32,"start":38}],"model":"cd06464","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":613207,"start_pos":612791,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2388","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2389","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26511","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30171","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5246","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5247","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5248","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3E7.02c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":4932,"ortholog_uniquename":"YBR072W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04567","ortholog_taxonid":4932,"ortholog_uniquename":"YDR171W","reference_uniquename":"PMID:29761456"}],"product":"heat shock protein Hsp16-family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0006457","GO:0051604","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006457":null,"GO:0034605":null,"GO:0034620":null,"GO:0044183":null,"GO:0071218":null,"GO:0140453":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04567.1"],"transcripts_by_uniquename":{"SJAG_04567.1":null},"uniprot_identifier":"B6K761","uniquename":"SJAG_04567"}


id: SJAG_04568
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109875],"is_not":false,"summary":null,"term":"GO:0010142"},{"annotations":[109876],"is_not":false,"summary":null,"term":"GO:0008299"},{"annotations":[109877,115657],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[109873],"is_not":false,"summary":null,"term":"GO:0032478"},{"annotations":[109874],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[109878,115654],"is_not":false,"summary":null,"term":"GO:0097269"}]},"dbxrefs":["GOA:B6K762","EnsemblGenomes-Tr:EEB09366","InterPro:IPR008949","UniProtKB/TrEMBL:B6K762","InterPro:IPR033749","EnsemblGenomes-Gn:SJAG_04568","InterPro:IPR000092"],"deletion_viability":"unknown","disordered_region_coords":[[30,32]],"feature_publications":[{"reference_uniquename":"PMID:29191091","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"},{"uniquename":"SJAG_04563"}],"genes_by_uniquename":{"HGNC:17759":null,"SJAG_01865":null,"SJAG_04568":null,"SPBPJ4664.01":null,"YBR003W":null},"genetic_interactions":[[{"gene_a_uniquename":"SJAG_01865","gene_b_uniquename":"SJAG_04568","interaction_type":"Synthetic Rescue"},[{"reference_uniquename":"PMID:29191091","throughput":"low"}]]],"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.600.10","interpro_id":"IPR008949","interpro_name":"Isoprenoid synthase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":381,"score":0.0,"start":28}],"model":"3aq0B00","name":"Farnesyl Diphosphate Synthase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00348","interpro_id":"IPR000092","interpro_name":"Polyprenyl synthetase","interpro_type":"Family","locations":[{"end":331,"score":0.0,"start":61}],"model":"PF00348","name":"Polyprenyl synthetase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00723","interpro_id":"IPR033749","interpro_name":"Polyprenyl synthetase, conserved site","interpro_type":"Conserved_site","locations":[{"end":151,"score":0.0,"start":137}],"model":"PS00723","name":"Polyprenyl synthases signature 1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12001","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":380,"score":0.0,"start":24}],"model":"PTHR12001:SF69","name":"GERANYLGERANYL PYROPHOSPHATE SYNTHASE"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDS00005","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":334,"score":7.100000228262891e-36,"start":63}],"model":"SFLDS00005","name":"Isoprenoid Synthase Type I"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48576","interpro_id":"IPR008949","interpro_name":"Isoprenoid synthase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":380,"score":0.0,"start":36}],"model":"0049855","name":"Terpenoid synthases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00685","interpro_id":"IPR000092","interpro_name":"Polyprenyl synthetase","interpro_type":"Family","locations":[{"end":379,"score":0.0,"start":60}],"model":"cd00685","name":"Trans-Isoprenyl Diphosphate Synthases, head-to-tail"}],"location":{"chromosome_name":"supercont5.3","end_pos":612271,"start_pos":611071,"strand":"reverse"},"low_complexity_region_coords":[[77,92]],"name":"dps1","ortholog_annotations":[{"gene_uniquename":"SJAG_04568","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17759","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04568","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04568","ortholog_taxonid":4932,"ortholog_uniquename":"YBR003W","reference_uniquename":"PMID:29761456"}],"product":"decaprenyl diphosphate synthase subunit Dps1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29191091":null,"PMID:29761456":null},"subset_termids":["GO:0006744","GO:0005739","GO:0006629","GO:0016765"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0006744":null,"GO:0008299":null,"GO:0010142":null,"GO:0032478":null,"GO:0097269":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04568.1"],"transcripts_by_uniquename":{"SJAG_04568.1":null},"uniprot_identifier":"B6K762","uniquename":"SJAG_04568"}


id: SJAG_04569
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109882],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[109883],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[109884],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[109885],"is_not":false,"summary":null,"term":"GO:0006890"}],"cellular_component":[{"annotations":[109879],"is_not":false,"summary":null,"term":"GO:0030126"},{"annotations":[109880],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109881],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[109886],"is_not":false,"summary":null,"term":"GO:0038024"},{"annotations":[109887],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["InterPro:IPR006692","InterPro:IPR017986","InterPro:IPR020472","InterPro:IPR015943","InterPro:IPR036322","GOA:B6K763","UniProtKB/TrEMBL:B6K763","InterPro:IPR001680","InterPro:IPR016391","EnsemblGenomes-Tr:EEB09367","InterPro:IPR010714","EnsemblGenomes-Gn:SJAG_04569","InterPro:IPR019775"],"deletion_viability":"unknown","disordered_region_coords":[[776,779],[786,787],[791,793],[810,811],[820,821],[837,882]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"},{"name":"naa38","uniquename":"SJAG_06449"}],"genes_by_uniquename":{"HGNC:2230":null,"SJAG_04569":null,"SPBPJ4664.04":null,"YDL145C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.470","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":818,"score":0.0,"start":643}],"model":"3mkqB00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":327,"score":0.0,"start":1}],"model":"4j87A00","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":39,"score":0.06499999761581421,"start":16},{"end":81,"score":3.2000000373955118e-6,"start":45},{"end":123,"score":9.999999974752427e-7,"start":86},{"end":165,"score":7.500000265281415e-8,"start":128},{"end":239,"score":0.0006900000153109431,"start":207},{"end":284,"score":3.700000092976552e-7,"start":249}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04053","interpro_id":"IPR006692","interpro_name":"Coatomer, WD associated region","interpro_type":"Domain","locations":[{"end":771,"score":0.0,"start":349}],"model":"PF04053","name":"Coatomer WD associated region"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06957","interpro_id":"IPR010714","interpro_name":"Coatomer, alpha subunit, C-terminal","interpro_type":"Domain","locations":[{"end":1204,"score":0.0,"start":823}],"model":"PF06957","name":"Coatomer (COPI) alpha subunit C-terminus"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF003354","interpro_id":"IPR016391","interpro_name":"Coatomer subunit alpha","interpro_type":"Family","locations":[{"end":1207,"score":0.0,"start":1}],"model":"PIRSF003354","name":"Coatomer, alpha subunit"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00320","interpro_id":"IPR020472","interpro_name":"G-protein beta WD-40 repeat","interpro_type":"Repeat","locations":[{"end":124,"score":7.300000106624793e-7,"start":110},{"end":166,"score":7.300000106624793e-7,"start":152},{"end":285,"score":7.300000106624793e-7,"start":271}],"model":"PR00320","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":166,"score":0.0,"start":152},{"end":285,"score":0.0,"start":271}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":48,"score":0.0,"start":7},{"end":90,"score":0.0,"start":49},{"end":132,"score":0.0,"start":91},{"end":174,"score":0.0,"start":133},{"end":249,"score":0.0,"start":208},{"end":293,"score":0.0,"start":252}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":84,"score":0.0,"start":49},{"end":123,"score":0.0,"start":91},{"end":167,"score":0.0,"start":133},{"end":241,"score":0.0,"start":208},{"end":286,"score":0.0,"start":252}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR19876","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":337,"score":0.0,"start":6}],"model":"PTHR19876:SF1","name":"COATOMER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":39,"score":2.799999952316284,"start":4},{"end":81,"score":4.800000041882413e-8,"start":42},{"end":123,"score":1.1000000199601345e-7,"start":84},{"end":165,"score":1.9999999920083944e-11,"start":126},{"end":240,"score":1.2000000424450263e-6,"start":201},{"end":284,"score":1.0000000116860974e-7,"start":245},{"end":325,"score":22.0,"start":287}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":322,"score":0.0,"start":3}],"model":"0053623","name":"WD40 repeat-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82171","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":588,"score":5.489999921337585e-7,"start":347}],"model":"0048263","name":"DPP6 N-terminal domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":325,"score":0.0,"start":17}],"model":"cd00200","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22948","interpro_id":"IPR047312","interpro_name":"Coatomer subunit alpha, WD Associated Region","interpro_type":"Domain","locations":[{"end":779,"score":0.0,"start":331}],"model":"cd22948","name":"Coatomer WD Associated Region from Coatomer Subunit Alpha"}],"location":{"chromosome_name":"supercont5.3","end_pos":609845,"start_pos":606119,"strand":"reverse"},"low_complexity_region_coords":[[856,877]],"name":"cop1","ortholog_annotations":[{"gene_uniquename":"SJAG_04569","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2230","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04569","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04569","ortholog_taxonid":4932,"ortholog_uniquename":"YDL145C","reference_uniquename":"PMID:29761456"}],"product":"coatomer alpha subunit Cop1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016192","GO:0038024","GO:0005198","GO:0005794","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0005737":null,"GO:0005794":null,"GO:0006886":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0030126":null,"GO:0038024":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04569.1"],"transcripts_by_uniquename":{"SJAG_04569.1":null},"uniprot_identifier":"B6K763","uniquename":"SJAG_04569"}


id: SJAG_04570
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[109888],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109889],"is_not":false,"summary":null,"term":"GO:0016020"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K764","GOA:B6K764","EnsemblGenomes-Tr:EEB09368","InterPro:IPR006838","EnsemblGenomes-Gn:SJAG_04570"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"},{"name":"apl2","uniquename":"SJAG_04565"}],"genes_by_uniquename":{"HGNC:21214":null,"HGNC:21607":null,"SJAG_04570":null,"SPBPJ4664.05":null,"YHR140W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04750","interpro_id":"IPR006838","interpro_name":"ADTRP/AIG1","interpro_type":"Family","locations":[{"end":223,"score":3.299999968146757e-32,"start":25}],"model":"PF04750","name":"FAR-17a/AIG1-like protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10989","interpro_id":"IPR006838","interpro_name":"ADTRP/AIG1","interpro_type":"Family","locations":[{"end":232,"score":2.1999999535097432e-35,"start":15}],"model":"PTHR10989:SF16","name":"ANDROGEN-INDUCED PROTEIN 1-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":605704,"start_pos":604939,"strand":"reverse"},"low_complexity_region_coords":[[65,71]],"ortholog_annotations":[{"gene_uniquename":"SJAG_04570","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21214","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21607","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04570","ortholog_taxonid":4932,"ortholog_uniquename":"YHR140W","reference_uniquename":"PMID:29761456"}],"product":"endomembrane system protein, FAR-17a/AIG1-like family protein, human AIG1 and ADTRP ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0016020":null},"tm_domain_coords":[[21,43],[58,80],[93,115],[130,152],[159,178],[202,219]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04570.1"],"transcripts_by_uniquename":{"SJAG_04570.1":null},"uniprot_identifier":"B6K764","uniquename":"SJAG_04570"}


id: SJAG_04571
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109891],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[109892],"is_not":false,"summary":null,"term":"GO:0006491"},{"annotations":[109893],"is_not":false,"summary":null,"term":"GO:0006486"},{"annotations":[109894],"is_not":false,"summary":null,"term":"GO:0018279"}],"cellular_component":[{"annotations":[109890],"is_not":false,"summary":null,"term":"GO:0005788"}],"molecular_function":[{"annotations":[109895],"is_not":false,"summary":null,"term":"GO:0005509"},{"annotations":[109896],"is_not":false,"summary":null,"term":"GO:0005537"},{"annotations":[109897],"is_not":false,"summary":null,"term":"GO:0003980"},{"annotations":[78391],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09369","GOA:B6K765","EnsemblGenomes-Gn:SJAG_04571","InterPro:IPR040497","UniProtKB/TrEMBL:B6K765","InterPro:IPR029044","InterPro:IPR040692","InterPro:IPR040693","InterPro:IPR040694","InterPro:IPR009448"],"deletion_viability":"unknown","disordered_region_coords":[[238,241],[1011,1012],[1015,1026],[1067,1069],[1101,1104],[1439,1444],[1403,1402],[1412,1418]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"},{"name":"knk1","uniquename":"SJAG_04566"}],"genes_by_uniquename":{"HGNC:15663":null,"HGNC:15664":null,"SJAG_04571":null,"SPBPJ4664.06":null,"YOR336W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.550.10","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphospho-sugar transferases","interpro_type":"Homologous_superfamily","locations":[{"end":1389,"score":6.499999830030386e-37,"start":1136}],"model":"1g9rA00","name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06427","interpro_id":"IPR009448","interpro_name":"UDP-glucose:Glycoprotein Glucosyltransferase","interpro_type":"Family","locations":[{"end":1108,"score":5.2000000164896e-29,"start":1006}],"model":"PF06427","name":"UDP-glucose:Glycoprotein Glucosyltransferase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18400","interpro_id":"IPR040693","interpro_name":"UGGT, thioredoxin-like domain 1","interpro_type":"Domain","locations":[{"end":205,"score":5.000000229068525e-19,"start":34}],"model":"PF18400","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18401","interpro_id":"IPR040694","interpro_name":"UGGT, thioredoxin-like domain 2","interpro_type":"Domain","locations":[{"end":386,"score":4.199999989514762e-35,"start":260}],"model":"PF18401","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18402","interpro_id":"IPR040692","interpro_name":"UGGT, thioredoxin-like domain 3","interpro_type":"Domain","locations":[{"end":636,"score":0.0,"start":393}],"model":"PF18402","name":"Thioredoxin-like domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18404","interpro_id":"IPR040497","interpro_name":"Glucosyltransferase 24, catalytic domain","interpro_type":"Domain","locations":[{"end":1401,"score":0.0,"start":1135}],"model":"PF18404","name":"Glucosyltransferase 24"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11226","interpro_id":"IPR009448","interpro_name":"UDP-glucose:Glycoprotein Glucosyltransferase","interpro_type":"Family","locations":[{"end":1439,"score":0.0,"start":17}],"model":"PTHR11226:SF0","name":"UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53448","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphospho-sugar transferases","interpro_type":"Homologous_superfamily","locations":[{"end":1401,"score":0.0,"start":1135}],"model":"0038020","name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06432","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1382,"score":0.0,"start":1135}],"model":"cd06432","name":"The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family"}],"location":{"chromosome_name":"supercont5.3","end_pos":604471,"start_pos":600137,"strand":"reverse"},"low_complexity_region_coords":[[5,18],[91,102],[614,629],[1403,1411],[1419,1438]],"name":"gpt1","ortholog_annotations":[{"gene_uniquename":"SJAG_04571","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15664","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":4896,"ortholog_uniquename":"SPBPJ4664.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04571","ortholog_taxonid":4932,"ortholog_uniquename":"YOR336W","reference_uniquename":"PMID:29761456"}],"product":"UDP-glucose-glycoprotein glucosyltransferase Gpt1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016757","GO:0030163","GO:0006486","GO:0005783","GO:0051082"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003980":null,"GO:0005509":null,"GO:0005537":null,"GO:0005788":null,"GO:0006486":null,"GO:0006491":null,"GO:0018279":null,"GO:0036503":null,"GO:0051082":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04571.1"],"transcripts_by_uniquename":{"SJAG_04571.1":null},"uniprot_identifier":"B6K765","uniquename":"SJAG_04571"}


id: SJAG_04572
data:
  {"coiled_coil_coords":[[445,475]],"cv_annotations":{"biological_process":[{"annotations":[98232],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[98230],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[98231],"is_not":false,"summary":null,"term":"GO:0008541"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K766","EnsemblGenomes-Tr:EEB09370","GOA:B6K766","InterPro:IPR000717","InterPro:IPR013586","EnsemblGenomes-Gn:SJAG_04572","InterPro:IPR035267","InterPro:IPR036390"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[85,100],[410,410],[454,459],[478,480]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"},{"uniquename":"SJAG_04567"}],"genes_by_uniquename":{"HGNC:9560":null,"SJAG_04572":null,"SPBC119.01":null,"YER021W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.570","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":409,"score":2.4000000848900527e-6,"start":239}],"model":"3txnA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01399","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":407,"score":1.599999949224836e-18,"start":306}],"model":"PF01399","name":"PCI domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08375","interpro_id":"IPR013586","interpro_name":"26S proteasome regulatory subunit, C-terminal","interpro_type":"Domain","locations":[{"end":475,"score":6.000000240508405e-26,"start":412}],"model":"PF08375","name":"Proteasome regulatory subunit C-terminal"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50250","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":412,"score":0.0,"start":232}],"model":"PS50250","name":"PCI domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10758","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":458,"score":0.0,"start":16}],"model":"PTHR10758:SF2","name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00088","interpro_id":"IPR000717","interpro_name":"Proteasome component (PCI) domain","interpro_type":"Domain","locations":[{"end":430,"score":1.099999972191823e-25,"start":340}],"model":"SM00088","name":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00753","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":340,"score":0.0,"start":167}],"model":"SM00753","name":"PCI/PINT associated module"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":411,"score":2.499999936844688e-6,"start":340}],"model":"0049886","name":"\"Winged helix\" DNA-binding domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":599333,"start_pos":597831,"strand":"reverse"},"low_complexity_region_coords":[[164,175],[463,477]],"name":"rpn3","ortholog_annotations":[{"gene_uniquename":"SJAG_04572","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9560","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04572","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04572","ortholog_taxonid":4932,"ortholog_uniquename":"YER021W","reference_uniquename":"PMID:29761456"}],"product":"19S proteasome regulatory subunit Rpn3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0008541":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04572.1"],"transcripts_by_uniquename":{"SJAG_04572.1":null},"uniprot_identifier":"B6K766","uniquename":"SJAG_04572"}


id: SJAG_04573
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98237],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[98238],"is_not":false,"summary":null,"term":"GO:0031146"},{"annotations":[98239],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[98240],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[98233],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[98234],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98235],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[98236],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[98241],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[98242],"is_not":false,"summary":null,"term":"GO:0061631"},{"annotations":[72324],"is_not":false,"summary":null,"term":"GO:0031625"}]},"dbxrefs":["InterPro:IPR000608","InterPro:IPR016135","InterPro:IPR023313","UniProtKB/TrEMBL:B6K767","EnsemblGenomes-Gn:SJAG_04573","EnsemblGenomes-Tr:EEB09371","GOA:B6K767"],"deletion_viability":"unknown","disordered_region_coords":[[17,18]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"},{"name":"dps1","uniquename":"SJAG_04568"}],"genes_by_uniquename":{"HGNC:12474":null,"HGNC:12475":null,"HGNC:12476":null,"HGNC:21647":null,"SJAG_04573":null,"SPBC119.02":null,"YBR082C":null,"YDR059C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.110.10","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":147,"score":0.0,"start":1}],"model":"4onlB00","name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00179","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":141,"score":0.0,"start":5}],"model":"PF00179","name":"Ubiquitin-conjugating enzyme"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00183","interpro_id":"IPR023313","interpro_name":"Ubiquitin-conjugating enzyme, active site","interpro_type":"Active_site","locations":[{"end":89,"score":0.0,"start":74}],"model":"PS00183","name":"Ubiquitin-conjugating (UBC) active site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50127","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":147,"score":0.0,"start":1}],"model":"PS50127","name":"Ubiquitin-conjugating (UBC) core domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24068","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":135,"score":0.0,"start":29}],"model":"PTHR24068:SF74","name":"UBIQUITIN-CONJUGATING ENZYME E2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00212","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":147,"score":0.0,"start":4}],"model":"SM00212","name":"Ubiquitin-conjugating enzyme E2, catalytic domain homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54495","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":146,"score":0.0,"start":1}],"model":"0054300","name":"UBC-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00195","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":142,"score":0.0,"start":4}],"model":"cd00195","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":597310,"start_pos":596867,"strand":"reverse"},"name":"ubc4","ortholog_annotations":[{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12474","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12475","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12476","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21647","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC119.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4932,"ortholog_uniquename":"YBR082C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04573","ortholog_taxonid":4932,"ortholog_uniquename":"YDR059C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin conjugating enzyme E2 for APC and SCF Ubc4/UbcP1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016746","GO:0044772","GO:0030163","GO:0019787","GO:0005634","GO:0023052","GO:0005829","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006511":null,"GO:0031146":null,"GO:0031625":null,"GO:0032933":null,"GO:0045842":null,"GO:0061631":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04573.1"],"transcripts_by_uniquename":{"SJAG_04573.1":null},"uniprot_identifier":"B6K767","uniquename":"SJAG_04573"}


id: SJAG_04574
data:
  {"alleles_by_uniquename":{"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[106618],"is_not":false,"summary":null,"term":"GO:0033562"},{"annotations":[106619],"is_not":false,"summary":null,"term":"GO:0071040"},{"annotations":[106620],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[106621],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[106622],"is_not":false,"summary":null,"term":"GO:0140727"}],"cellular_component":[{"annotations":[106613],"is_not":false,"summary":null,"term":"GO:0043494"},{"annotations":[106614],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[106615],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[106616],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[106617],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[106623],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[106624,106625],"is_not":false,"summary":null,"term":"GO:0046974"},{"annotations":[106626],"is_not":false,"summary":null,"term":"GO:0140948"},{"annotations":[106627],"is_not":false,"summary":null,"term":"GO:0140949"},{"annotations":[106628],"is_not":false,"summary":null,"term":"GO:0140947"},{"annotations":[106629],"is_not":false,"summary":null,"term":"GO:0140566"},{"annotations":[106630],"is_not":false,"summary":null,"term":"GO:0008168"},{"annotations":[106631],"is_not":false,"summary":null,"term":"GO:0016279"},{"annotations":[106632],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[106633],"is_not":false,"summary":null,"term":"GO:0003727"},{"annotations":[106634],"is_not":false,"summary":null,"term":"GO:0008270"}],"multi_locus_phenotype":[{"annotations":[115338],"is_not":false,"summary":null,"term":"FYPO:0002061"}],"single_locus_phenotype":[{"annotations":[115337],"is_not":false,"summary":null,"term":"FYPO:0002061"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09372","EnsemblGenomes-Gn:SJAG_04574","InterPro:IPR007728","InterPro:IPR000953","InterPro:IPR011381","InterPro:IPR023779","InterPro:IPR003616","InterPro:IPR001214","UniProtKB/TrEMBL:B6K768","InterPro:IPR016197","InterPro:IPR023780","GOA:B6K768"],"deletion_viability":"inviable","disordered_region_coords":[[3,12],[20,25],[53,54],[63,69],[133,161],[163,202],[210,216],[223,225],[228,229],[317,318],[487,493],[72,89],[102,121]],"feature_publications":[{"reference_uniquename":"PMID:35226668","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"},{"name":"cop1","uniquename":"SJAG_04569"}],"genes_by_uniquename":{"HGNC:11479":null,"HGNC:17287":null,"SJAG_03118":null,"SJAG_04574":null,"SPBC428.08c":null},"genotypes_by_uniquename":{"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.170.270.10","interpro_id":"IPR046341","interpro_name":"SET domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":482,"score":0.0,"start":221}],"model":"1mvhA00","name":"SET domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":75,"score":1.8999999397044928e-20,"start":13}],"model":"1g6zA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00385","interpro_id":"IPR023780","interpro_name":"Chromo domain","interpro_type":"Domain","locations":[{"end":71,"score":2.999999901276418e-11,"start":19}],"model":"PF00385","name":"Chromo (CHRromatin Organisation MOdifier) domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00856","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":478,"score":1.3000000492180588e-18,"start":366}],"model":"PF00856","name":"SET domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05033","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":347,"score":5.2999998318072695e-21,"start":245}],"model":"PF05033","name":"Pre-SET motif"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF009343","interpro_id":"IPR011381","interpro_name":"Histone-lysine N-methyltransferase SUV39H1/2-like","interpro_type":"Family","locations":[{"end":517,"score":0.0,"start":3}],"model":"PIRSF009343","name":"Histone H3-K9 methyltransferase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00598","interpro_id":"IPR023779","interpro_name":"Chromo domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":58,"score":0.0,"start":38}],"model":"PS00598","name":"Chromo domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50013","interpro_id":"IPR000953","interpro_name":"Chromo/chromo shadow domain","interpro_type":"Domain","locations":[{"end":72,"score":0.0,"start":19}],"model":"PS50013","name":"Chromo and chromo shadow domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50280","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":479,"score":0.0,"start":355}],"model":"PS50280","name":"SET domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50867","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":352,"score":0.0,"start":286}],"model":"PS50867","name":"Pre-SET domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50868","interpro_id":"IPR003616","interpro_name":"Post-SET domain","interpro_type":"Domain","locations":[{"end":517,"score":0.0,"start":501}],"model":"PS50868","name":"Post-SET domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46223","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":516,"score":0.0,"start":27}],"model":"PTHR46223:SF3","name":"HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00298","interpro_id":"IPR000953","interpro_name":"Chromo/chromo shadow domain","interpro_type":"Domain","locations":[{"end":73,"score":1.300000011068489e-13,"start":18}],"model":"SM00298","name":"Chromatin organization modifier domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00317","interpro_id":"IPR001214","interpro_name":"SET domain","interpro_type":"Domain","locations":[{"end":485,"score":4.199999989514762e-35,"start":355}],"model":"SM00317","name":"SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00468","interpro_id":"IPR007728","interpro_name":"Pre-SET domain","interpro_type":"Domain","locations":[{"end":339,"score":6.000000117248888e-25,"start":237}],"model":"SM00468","name":"N-terminal to some SET domains"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00508","interpro_id":"IPR003616","interpro_name":"Post-SET domain","interpro_type":"Domain","locations":[{"end":517,"score":0.0004400000034365803,"start":501}],"model":"SM00508","name":"Cysteine-rich motif following a subset of SET domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54160","interpro_id":"IPR016197","interpro_name":"Chromo-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":75,"score":1.4599999200634505e-17,"start":13}],"model":"0046932","name":"Chromo domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82199","interpro_id":"IPR046341","interpro_name":"SET domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":480,"score":0.0,"start":228}],"model":"0048228","name":"SET domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":593494,"start_pos":591711,"strand":"reverse"},"low_complexity_region_coords":[[16,18],[90,101],[122,132]],"name":"clr4","ortholog_annotations":[{"gene_uniquename":"SJAG_04574","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11479","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04574","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17287","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04574","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.08c","reference_uniquename":"PMID:21511999"}],"product":"histone lysine H3-K9 methyltransferase (Suv39) Clr4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:35226668":null},"subset_termids":["FYPO:0002059","GO:0006325","GO:0005654","GO:0008276","GO:0005634","GO:0140096","GO:0005694","GO:0016741","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null,"GO:0003690":null,"GO:0003697":null,"GO:0003727":null,"GO:0005634":null,"GO:0005721":null,"GO:0008168":null,"GO:0008270":null,"GO:0016279":null,"GO:0030466":null,"GO:0031508":null,"GO:0031934":null,"GO:0033562":null,"GO:0043494":null,"GO:0046974":null,"GO:0071040":null,"GO:0140566":null,"GO:0140720":null,"GO:0140727":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04574.1"],"transcripts_by_uniquename":{"SJAG_04574.1":null},"uniprot_identifier":"B6K768","uniquename":"SJAG_04574"}


id: SJAG_04575
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[106610],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[106611],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106612],"is_not":false,"summary":null,"term":"GO:0008289"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K769","InterPro:IPR039483","InterPro:IPR011993","EnsemblGenomes-Gn:SJAG_04575","InterPro:IPR001849","InterPro:IPR039712","EnsemblGenomes-Tr:EEB09373"],"deletion_viability":"unknown","disordered_region_coords":[[3,6],[17,18],[44,55],[57,59],[123,150],[296,301],[637,669],[23,30],[320,359],[377,405],[423,422],[432,439],[452,463],[476,489],[513,520],[534,580],[603,620]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"},{"uniquename":"SJAG_04570"}],"genes_by_uniquename":{"SJAG_04575":null,"SPBC428.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":242,"score":2.4000000848900527e-6,"start":164}],"model":"2d9xA01","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15406","interpro_id":"IPR039483","interpro_name":"Meiotic expression up-regulated protein 6, PH domain","interpro_type":"Domain","locations":[{"end":234,"score":1.7000000521282105e-36,"start":110}],"model":"PF15406","name":"Pleckstrin homology domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50003","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":237,"score":0.0,"start":74}],"model":"PS50003","name":"PH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42073","interpro_id":"IPR039712","interpro_name":"Meiotic expression up-regulated protein 6","interpro_type":"Family","locations":[{"end":661,"score":0.0,"start":1}],"model":"PTHR42073:SF1","name":"MEIOTIC EXPRESSION UP-REGULATED PROTEIN 6"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00233","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":239,"score":0.000019999999494757503,"start":115}],"model":"SM00233","name":"Pleckstrin homology domain."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":249,"score":3.41000006010006e-10,"start":170}],"model":"0050517","name":"PH domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00821","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":230,"score":3.069899889851513e-7,"start":168}],"model":"cd00821","name":"Pleckstrin homology (PH) domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":591339,"start_pos":589231,"strand":"forward"},"low_complexity_region_coords":[[31,43],[138,152],[278,295],[360,376],[406,422],[423,431],[440,451],[464,475],[490,512],[521,533],[581,602],[621,636]],"name":"meu6","ortholog_annotations":[{"gene_uniquename":"SJAG_04575","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.07","reference_uniquename":"PMID:21511999"}],"product":"pleckstrin homology domain protein Meu6","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0008289","GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005730":null,"GO:0008289":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04575.1"],"transcripts_by_uniquename":{"SJAG_04575.1":null},"uniprot_identifier":"B6K769","uniquename":"SJAG_04575"}


id: SJAG_04576
data:
  {"coiled_coil_coords":[[1,21]],"cv_annotations":{"biological_process":[{"annotations":[106608],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[106609],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[106605],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[106606],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[106607],"is_not":false,"summary":null,"term":"GO:0070210"}]},"dbxrefs":["GOA:B6K770","EnsemblGenomes-Tr:EEB09374","InterPro:IPR013904","UniProtKB/TrEMBL:B6K770","InterPro:IPR039602","EnsemblGenomes-Gn:SJAG_04576"],"deletion_viability":"unknown","disordered_region_coords":[[25,32],[163,168],[217,238]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"},{"name":"gpt1","uniquename":"SJAG_04571"}],"genes_by_uniquename":{"SJAG_04576":null,"SPBC428.06c":null,"YBR095C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08595","interpro_id":"IPR013904","interpro_name":"Transcriptional regulatory protein RXT2, N-terminal","interpro_type":"Domain","locations":[{"end":156,"score":3.699999941847443e-12,"start":33}],"model":"PF08595","name":"RXT2-like, N-terminal"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28232","interpro_id":"IPR039602","interpro_name":"Transcriptional regulatory protein Rxt2","interpro_type":"Family","locations":[{"end":226,"score":0.0,"start":158}],"model":"PTHR28232:SF1","name":"TRANSCRIPTIONAL REGULATORY PROTEIN RXT2"}],"location":{"chromosome_name":"supercont5.3","end_pos":588834,"start_pos":587877,"strand":"reverse"},"name":"rxt2","ortholog_annotations":[{"gene_uniquename":"SJAG_04576","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04576","ortholog_taxonid":4932,"ortholog_uniquename":"YBR095C","reference_uniquename":"PMID:29761456"}],"product":"Clr6 and Rpd3L histone deacetylase complex subunit Rxt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006355","GO:0005654","GO:0006325","GO:0006351","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006357":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04576.1"],"transcripts_by_uniquename":{"SJAG_04576.1":null},"uniprot_identifier":"B6K770","uniquename":"SJAG_04576"}


id: SJAG_04577
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106600],"is_not":false,"summary":null,"term":"GO:0006526"},{"annotations":[106601],"is_not":false,"summary":null,"term":"GO:0000053"},{"annotations":[106602],"is_not":false,"summary":null,"term":"GO:0000050"}],"cellular_component":[{"annotations":[106599],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[106603],"is_not":false,"summary":null,"term":"GO:0004055"},{"annotations":[106604],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_04577","InterPro:IPR024074","UniProtKB/TrEMBL:B6K771","EnsemblGenomes-Tr:EEB09375","InterPro:IPR023434","GOA:B6K771","InterPro:IPR018223","InterPro:IPR001518","InterPro:IPR014729"],"deletion_viability":"unknown","disordered_region_coords":[[208,213]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"},{"name":"rxt2","uniquename":"SJAG_04576"},{"name":"meu6","uniquename":"SJAG_04575"},{"name":"clr4","uniquename":"SJAG_04574"},{"name":"ubc4","uniquename":"SJAG_04573"},{"name":"rpn3","uniquename":"SJAG_04572"}],"genes_by_uniquename":{"HGNC:758":null,"SJAG_04577":null,"SPBC428.05c":null,"YOL058W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":181,"score":0.0,"start":1}],"model":"1vl2A01","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1260.10","interpro_id":"IPR024074","interpro_name":"Argininosuccinate synthetase, catalytic/multimerisation domain body","interpro_type":"Homologous_superfamily","locations":[{"end":410,"score":0.0,"start":182}],"model":"1vl2D02","name":"Argininosuccinate synthetase, chain A, domain 2"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00005","interpro_id":"IPR023434","interpro_name":"Argininosuccinate synthase, type 1 subfamily","interpro_type":"Family","locations":[{"end":409,"score":0.0,"start":6}],"model":"MF_00005","name":"Argininosuccinate synthase [argG]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00764","interpro_id":"IPR001518","interpro_name":"Argininosuccinate synthase","interpro_type":"Family","locations":[{"end":402,"score":0.0,"start":10}],"model":"PF00764","name":"Arginosuccinate synthase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00564","interpro_id":"IPR018223","interpro_name":"Argininosuccinate synthase, conserved site","interpro_type":"Conserved_site","locations":[{"end":20,"score":0.0,"start":12}],"model":"PS00564","name":"Argininosuccinate synthase signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00565","interpro_id":"IPR018223","interpro_name":"Argininosuccinate synthase, conserved site","interpro_type":"Conserved_site","locations":[{"end":130,"score":0.0,"start":119}],"model":"PS00565","name":"Argininosuccinate synthase signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11587","interpro_id":"IPR001518","interpro_name":"Argininosuccinate synthase","interpro_type":"Family","locations":[{"end":407,"score":0.0,"start":6}],"model":"PTHR11587:SF2","name":"ARGININOSUCCINATE SYNTHASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":177,"score":0.0,"start":7}],"model":"0039977","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF69864","interpro_id":"IPR024074","interpro_name":"Argininosuccinate synthetase, catalytic/multimerisation domain body","interpro_type":"Homologous_superfamily","locations":[{"end":407,"score":0.0,"start":180}],"model":"0039978","name":"Argininosuccinate synthetase, C-terminal domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00032","interpro_id":"IPR001518","interpro_name":"Argininosuccinate synthase","interpro_type":"Family","locations":[{"end":406,"score":0.0,"start":9}],"model":"TIGR00032","name":"argininosuccinate synthase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01999","interpro_id":"IPR023434","interpro_name":"Argininosuccinate synthase, type 1 subfamily","interpro_type":"Family","locations":[{"end":400,"score":0.0,"start":9}],"model":"cd01999","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":586975,"start_pos":585740,"strand":"reverse"},"low_complexity_region_coords":[[99,108]],"name":"arg12","ortholog_annotations":[{"gene_uniquename":"SJAG_04577","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:758","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_04577","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC428.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_04577","ortholog_taxonid":4932,"ortholog_uniquename":"YOL058W","reference_uniquename":"PMID:29761456"}],"product":"argininosuccinate synthase Arg12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0071941","GO:0016874","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000050":null,"GO:0000053":null,"GO:0004055":null,"GO:0005524":null,"GO:0005829":null,"GO:0006526":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_04577.1"],"transcripts_by_uniquename":{"SJAG_04577.1":null},"uniprot_identifier":"B6K771","uniquename":"SJAG_04577"}


