# terms

id: PR:P87056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.08c gene.","definition_xrefs":["UniProtKB:P87056","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain-containing protein C57A10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.08c","synonyms":[{"name":"Spom972h-SPAC57A10.08c","type":"exact"}],"termid":"PR:P87056"}


id: GO:1901366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of funalenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"funalenone metabolic process","termid":"GO:1901364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"funalenone biosynthetic process","synonyms":[{"name":"funalenone anabolism","type":"exact"},{"name":"funalenone biosynthesis","type":"exact"},{"name":"funalenone formation","type":"exact"},{"name":"funalenone synthesis","type":"exact"}],"termid":"GO:1901366"}


id: GO:0015695
data:
  {"annotated_genes":["SJAG_05346","SJAG_03400","SJAG_00835","SJAG_02125","SJAG_00543","SJAG_04984","SJAG_00991","SJAG_01589","SJAG_03970","SJAG_03591","SJAG_02716","SJAG_01890","SJAG_04588","SJAG_03652","SJAG_04637","SJAG_02029","SJAG_04725","SJAG_04731","SJAG_02605","SJAG_03808","SJAG_02059","SJAG_02962","SJAG_02060","SJAG_04673","SJAG_04295","SJAG_02152","SJAG_03256","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62985,109822,115073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[94361,96361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[96486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[93500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[99965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[62778,94952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[96487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99969,98931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[106157,99970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[99971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[64758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[99972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[95378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"},{"annotations":[104039,94363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[84463,98731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[99771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[84286],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[89464,106673,87883,95007],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[89465,87884,95008],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[89466],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[103208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[86311,86310,114817,113559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[86313,114818,113560,86312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[68487,63713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901962"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"},{"annotations":[105584,113439,105578,105590,57675,107061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[96800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86317,96801,86316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"},{"annotations":[62779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01589":null,"SJAG_01890":null,"SJAG_02029":null,"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02152":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_03970":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04673":null,"SJAG_04725":null,"SJAG_04731":null,"SJAG_04984":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organic cation transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015695","terms_by_termid":{"GO:0015825":null,"GO:0015828":null,"GO:0015847":null,"GO:0071934":null,"GO:0072489":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0140125":null,"GO:0140300":null,"GO:1901482":null,"GO:1901962":null,"GO:1903090":null,"GO:1903091":null,"GO:1903711":null,"GO:1903712":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990575":null,"GO:1990818":null}}


id: PBO:0076141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 divergent transcript","termid":"PBO:0076141"}


id: GO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to external biotic stimulus","termid":"GO:0071217"}


id: GO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25S)-5beta-spirostan-3beta-ol + UDP-D-glucose = (25S)-5beta-spirostan-3beta-yl beta-D-glucoside + H+ + UDP.","definition_xrefs":["EC:2.4.1.193","RHEA:14461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"sarsapogenin 3-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.193-RXN","KEGG_REACTION:R04359"],"synonyms":[{"name":"UDP-glucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(25S)-5beta-spirostan-3beta-ol 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"sarsapogenin 3beta-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sarsapogenin glucosyltransferase activity","type":"related"}],"termid":"GO:0047249"}


id: PBO:0049226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 7","termid":"PBO:0049226"}


id: GO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the siderochrome enterobactin, a cyclic trimer of 2, 3 dihydroxybenzoylserine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"enterobactin transport","synonyms":[{"name":"enterochelin transport","type":"exact"}],"termid":"GO:0042930"}


id: GO:0008336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 4-(trimethylammonio)butanoate + O2 = carnitine + CO2 + succinate.","definition_xrefs":["EC:1.14.11.1","RHEA:24028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-butyrobetaine dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02397","MetaCyc:1.14.11.1-RXN","Reactome:R-HSA-71261"],"synonyms":[{"name":"4-trimethylammoniobutanoate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"alpha-butyrobetaine hydroxylase activity","type":"related"},{"name":"butyrobetaine hydroxylase activity","type":"related"},{"name":"g-butyrobetaine dioxygenase activity","type":"exact"},{"name":"gamma-BBH activity","type":"related"},{"name":"gamma-butyrobetaine hydroxylase activity","type":"related"},{"name":"gamma-butyrobetaine,2-oxoglutarate dioxygenase activity","type":"exact"}],"termid":"GO:0008336"}


id: GO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling posture","synonyms":[{"name":"regulation of posture","type":"exact"}],"termid":"GO:0050884"}


id: GO:0044023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4-serine (position 1) + ATP = histone H4-phosphoserine (position 1) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 1 of histone H4.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H4 kinase activity","termid":"GO:0140997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0140096","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"histone H4S1 kinase activity","synonyms":[{"name":"histone kinase activity (H4-S1 specific)","type":"exact"},{"name":"histone serine kinase activity (H4-S1 specific)","type":"exact"},{"name":"histone-serine kinase activity (H4-S1 specific)","type":"exact"}],"termid":"GO:0044023"}


id: PBO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y1","termid":"PBO:0070294"}


id: PBO:0084998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N alpha-acetyl-transferase; involved in acetylation of the N-terminal residues of histones H4 and H2A","termid":"PBO:0084998"}


id: GO:2000179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"positively_regulates","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"}


id: PBO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 42","termid":"PBO:0071847"}


id: GO:0043750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of one or more alpha-D-mannose residues from GDP-mannose to positions 2,6 and others in 1-phosphatidyl-myo-inositol.","definition_xrefs":["EC:2.4.1.345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"phosphatidylinositol alpha-mannosyltransferase activity","secondary_identifiers":["RHEA:47368","MetaCyc:2.4.1.57-RXN"],"synonyms":[{"name":"GDP mannose-phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP mannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose:1-phosphatidyl-1D-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"GDPmannose:1-phosphatidyl-myo-inositol alpha-D-mannosyltransferase activity","type":"exact"},{"name":"guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase activity","type":"exact"},{"name":"phosphatidyl-myo-inositol alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0043750"}


id: PBO:0077368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 107","termid":"PBO:0077368"}


id: PR:O94442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NUBP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01886","PRO:DNx","PANTHER:PTHR23264:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor nbp35 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.08","secondary_identifiers":["UniProtKB:O94442"],"synonyms":[{"name":"Spom972h-NUBP1","type":"exact"},{"name":"nucleotide-binding protein 35 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94442"}


id: GO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound catabolic process","termid":"GO:0052805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole catabolic process","synonyms":[{"name":"nitroimidazole breakdown","type":"exact"},{"name":"nitroimidazole catabolism","type":"exact"},{"name":"nitroimidazole degradation","type":"exact"}],"termid":"GO:0052804"}


id: PBO:0083192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified essential gene RPT1; identified by expression profiling and mass spectrometry","termid":"PBO:0083192"}


id: GO:0051520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops the active process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bipolar cell growth","termid":"GO:0051517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"termination of bipolar cell growth","termid":"GO:0051520"}


id: PBO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelium and lymphocyte associated ASCH domain 1","termid":"PBO:0046383"}


id: GO:1904757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"positively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of gut granule assembly","synonyms":[{"name":"activation of gut granule assembly","type":"narrow"},{"name":"activation of gut granule biogenesis","type":"narrow"},{"name":"activation of gut granule formation","type":"narrow"},{"name":"positive regulation of gut granule biogenesis","type":"exact"},{"name":"positive regulation of gut granule formation","type":"exact"},{"name":"up regulation of gut granule assembly","type":"exact"},{"name":"up regulation of gut granule biogenesis","type":"exact"},{"name":"up regulation of gut granule formation","type":"exact"},{"name":"up-regulation of gut granule assembly","type":"exact"},{"name":"up-regulation of gut granule biogenesis","type":"exact"},{"name":"up-regulation of gut granule formation","type":"exact"},{"name":"upregulation of gut granule assembly","type":"exact"},{"name":"upregulation of gut granule biogenesis","type":"exact"},{"name":"upregulation of gut granule formation","type":"exact"}],"termid":"GO:1904757"}


id: PBO:0062580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 4","termid":"PBO:0062580"}


id: GO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052429)","synonyms":[{"name":"modulation by organism of symbiont B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052429"}


id: GO:0160166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoadipate + H+ + N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase] = CO2 + N(6)-[(R)-S(8)-glutaryldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase].","definition_xrefs":["PMID:32695416","PMID:29191460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoadipate dehydrogenase activity","secondary_identifiers":["RHEA:69576"],"termid":"GO:0160166"}


id: PR:O43076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SHQ1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02840","PANTHER:PTHR12967:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein shq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.13","secondary_identifiers":["UniProtKB:O43076"],"synonyms":[{"name":"Spom972h-SHQ1","type":"exact"}],"termid":"PR:O43076"}


id: FYPO:0000515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear import is decreased. Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nuclear import","synonyms":[{"name":"decreased nuclear import during mitotic cell cycle","type":"related"},{"name":"decreased nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: decreased","type":"related"},{"name":"reduced nuclear import","type":"exact"}],"termid":"FYPO:0000515"}


id: GO:0106026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Gly-tRNA(Ala).","definition_xrefs":["PMID:28362257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003674","GO:0016788","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"Gly-tRNA(Ala) hydrolase activity","termid":"GO:0106026"}


id: PBO:0057288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 508","termid":"PBO:0057288"}


id: FYPO:0009040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tea tree oil than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tea tree oil","synonyms":[{"name":"resistance to tea tree oil during mitotic cell cycle","type":"related"},{"name":"resistance to tea tree oil during vegetative growth","type":"exact"},{"name":"resistant to tea tree oil","type":"exact"}],"termid":"FYPO:0009040"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["GOC:hjd","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["PubMed:12216740","Unimod:30#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: PR:O60183
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.08","synonyms":[{"name":"Spom972h-sat1","type":"exact"}],"termid":"PR:O60183"}


id: PBO:0029698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_multiseptate_vegetative_cell","termid":"PBO:0029698"}


id: GO:0046941
data:
  {"annotated_genes":["SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88907],"is_not":false,"summary":null,"term":"GO:0046941"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.","definition_xrefs":["PMID:12761200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"azetidine-2-carboxylic acid acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046941","terms_by_termid":{"GO:0046941":null}}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107938],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02874","MetaCyc:SQUALENE-MONOOXYGENASE-RXN","Reactome:R-HSA-191299","EC:1.14.14.17"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: FYPO:0000088
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115632],"is_not":false,"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[115630,115631,115636,115637,115638],"is_not":false,"summary":null,"term":"FYPO:0000088"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydroxyurea. Cells stop growing (and may die) at a concentration of hydroxyurea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01205":null,"SJAG_01680":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":6,"genotypes_by_uniquename":{"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01205","SJAG_01680"],"name":"sensitive to hydroxyurea","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_01680","SJAG_04287","SJAG_04671","SJAG_01205","SJAG_00364"],"single_locus_genotype_uniquenames":["cds1delta","mrc1delta","chk1delta","crb2delta","rad3delta"],"synonyms":[{"name":"hypersensitive to hydroxyurea","type":"exact"},{"name":"sensitive to HU","type":"exact"},{"name":"sensitive to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0000088","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000088":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0088239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Stm1","termid":"PBO:0088239"}


id: PBO:0067238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 309, pseudogene","termid":"PBO:0067238"}


id: FYPO:0001543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphorus-containing substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular phosphorus level","synonyms":[{"name":"normal cellular level of phosphorus-containing substance","type":"exact"},{"name":"normal cellular phosphorus accumulation","type":"related"},{"name":"normal cellular phosphorus level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphorus level during vegetative growth","type":"exact"}],"termid":"FYPO:0001543"}


id: FYPO:0005727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint occurs more slowly than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:19592249","PomBase:mah","PMID:21664573","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased rate of deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"delayed inactivation of the SAC","type":"broad"},{"name":"delayed inactivation of the mitotic SAC","type":"exact"},{"name":"delayed inactivation of the mitotic spindle assembly checkpoint","type":"exact"},{"name":"reduced rate of deactivation of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005727"}


id: PBO:0076912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2A antisense RNA 1","termid":"PBO:0076912"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: PBO:0070607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 75","termid":"PBO:0070607"}


id: GO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the trabecular meshwork over time, from its formation to the mature structure. The trabecular meshwork is a fenestrated endothelial-like tissue situated at the intersection of the cornea and the iris. The trabecular meshwork provides drainage for the aqueous humor.","definition_xrefs":["PMID:20568247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecular meshwork development","termid":"GO:0002930"}


id: PBO:0086385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; YMR279C has a paralog, ATR1, that arose from the whole genome duplication","termid":"PBO:0086385"}


id: PBO:0074591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5C","termid":"PBO:0074591"}


id: GO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerulus development","termid":"GO:0090192"}


id: PBO:0004976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic enzyme (predicted)","termid":"PBO:0004976"}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + a glucosylceramide = a lactosylceramide + uridine-5'-diphosphate. The glucosylceramide has sphinganine as the long chain base.","definition_xrefs":["PMID:9593693","MetaCyc:RXN-10764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9851347"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: PBO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenylyl_cyclase_activity","termid":"PBO:0030056"}


id: PBO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 8 pseudogene","termid":"PBO:0042633"}


id: GO:0035391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at silent mating-type loci.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at silent mating-type cassette (obsolete GO:0035391)","termid":"GO:0035391"}


id: GO:1990338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma3 polypeptide chains.","definition_xrefs":["PMID:15979864","PMID:17453709","GOC:bhm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-14 complex","synonyms":[{"name":"laminin-423","type":"exact"}],"termid":"GO:1990338"}


id: GO:2001298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001298"}


id: PBO:0054537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1937","termid":"PBO:0054537"}


id: PBO:0074821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 19","termid":"PBO:0074821"}


id: PBO:0078394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 4-1","termid":"PBO:0078394"}


id: GO:0071865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"regulation of apoptosis in bone marrow","type":"narrow"},{"name":"regulation of apoptotic process in bone marrow","type":"exact"}],"termid":"GO:0071865"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.10-RXN","MetaCyc:RXN-1824","MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: PBO:0081310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92","termid":"PBO:0081310"}


id: PBO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase, pseudogene","termid":"PBO:0060517"}


id: PBO:0013228
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penetrance","termid":"PBO:0013228"}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GOC:TermGenie","PMID:22735702","GOC:di","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: GO:2001044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of integrin-mediated signaling pathway","synonyms":[{"name":"regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001044"}


id: GO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell of the mammary placode becomes an epithelial cell at the periphery of the mammary gland bud. Cells at the periphery of the bud are larger that those of the surrounding epithelium and are arranged concentrically.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral mammary gland bud epithelial cell differentiation","termid":"GO:0060645"}


id: GO:0072588
data:
  {"annotated_genes":["SJAG_01234","SJAG_04754","SJAG_00566","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91489,97283,102405,86181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.","definition_xrefs":["PMID:25590339","GOC:BHF_telomerase","GOC:jbu","PMID:17284456","GOC:BHF","GOC:vw","GOC:mah","PMID:20227365","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box H/ACA RNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA snoRNP pseudouridylase complex","type":"related"},{"name":"sRNP complex","type":"narrow"}],"termid":"GO:0072588","terms_by_termid":{"GO:0031429":null}}


id: PBO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 7","termid":"PBO:0050709"}


id: PBO:0078714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 2-2","termid":"PBO:0078714"}


id: PBO:0039222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKR7A2 pseudogene 1","termid":"PBO:0039222"}


id: GO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric distal tubule identity","termid":"GO:0072295"}


id: PBO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","termid":"PBO:0012288"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: GO:1903302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:mr","PMID:15804508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate kinase activity","synonyms":[{"name":"regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"regulation of phosphoenolpyruvate kinase activity","type":"exact"}],"termid":"GO:1903302"}


id: FYPO:0006775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"decreased PI-4-P accumulation","type":"related"},{"name":"decreased cellular PI(4)P level","type":"exact"},{"name":"decreased cellular PI-4-P level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006775"}


id: GO:1900104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of hyaluranon cable assembly","synonyms":[{"name":"regulation of HA cable assembly","type":"exact"}],"termid":"GO:1900104"}


id: GO:0060114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vestibular hair cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell differentiation","synonyms":[{"name":"vestibular hair cell differentiation","type":"exact"}],"termid":"GO:0060114"}


id: GO:0032795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heterotrimeric G-protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heterotrimeric G-protein binding","termid":"GO:0032795"}


id: PBO:0111531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 228","termid":"PBO:0111531"}


id: GO:0008924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + a quinone = oxaloacetate + a quinol.","definition_xrefs":["PMID:234747","RHEA:46012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.4","MetaCyc:MALATE-DEHYDROGENASE-ACCEPTOR-RXN"],"synonyms":[{"name":"(S)-malate:(quinone) oxidoreductase activity","type":"related"},{"name":"(S)-malate:quinone oxidoreductase activity","type":"related"},{"name":"FAD-dependent malate dehydrogenase activity","type":"related"},{"name":"MQO activity","type":"broad"}],"termid":"GO:0008924"}


id: PBO:0082656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved in transcription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not3p and Not5p is mutated in cancers","termid":"PBO:0082656"}


id: FYPO:0003225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule polymerization, i.e. the addition of tubulin dimers to a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:23051734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"normal microtubule polymerization rate","type":"exact"},{"name":"normal rate of microtubule growth","type":"related"},{"name":"normal rate of microtubule polymerisation","type":"exact"},{"name":"normal rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule polymerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003225"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115590],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: PBO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETV5 antisense RNA 1","termid":"PBO:0046707"}


id: PBO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q","termid":"PBO:0048797"}


id: PR:000049784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-) that has been phosphorylated on two consecutive residues equivalent to Ser-35 and Ser-36 in the sequence represented by UniProtKB:Q9UUG5-1. Example: UniProtKB:Q9UUG5-1, Ser-35/Ser-36, MOD:00046.","definition_xrefs":["PMID:19570908","PomBase:MAH","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUG5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rlc1/Phos(S35,S36)","pombase_gene_id":"SPAC926.03","synonyms":[{"name":"Rlc1p phosphorylated 1","type":"broad"},{"name":"myosin II regulatory light chain Rlc1p Ser-35/Ser-36 phosphorylated","type":"related"},{"name":"rlc1/Phos(S35,S36)","type":"exact"}],"termid":"PR:000049784"}


id: PBO:0090589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIB complex subunit, human DNAJC11 ortholog","termid":"PBO:0090589"}


id: PR:Q9P7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATPase family AAA domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C24B10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.10c","secondary_identifiers":["UniProtKB:Q9P7J5"],"synonyms":[{"name":"Spom972h-ATAD1","type":"exact"}],"termid":"PR:Q9P7J5"}


id: PBO:0073252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN4 antisense RNA 1","termid":"PBO:0073252"}


id: PATO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000248 pupillary reflex (obsolete PATO:0000248)","termid":"PATO:0000248"}


id: PBO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFN1 pseudogene 1","termid":"PBO:0056798"}


id: PBO:0077385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126A","termid":"PBO:0077385"}


id: PBO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK4 antisense RNA 1","termid":"PBO:0045325"}


id: GO:0001164
data:
  {"annotated_genes":["SJAG_02813","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105289,108064],"is_not":false,"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE.","definition_xrefs":["GOC:txnOH","PMID:12865296","PMID:14969726","PMID:8057832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"},{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase I core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001187"],"synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting","type":"related"}],"termid":"GO:0001164","terms_by_termid":{"GO:0001164":null}}


id: FYPO:0006279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal transcription termination","termid":"FYPO:0007463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"normal termination of RNA polymerase II transcription","synonyms":[{"name":"normal RNA polymerase II transcription termination","type":"exact"},{"name":"normal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0006279"}


id: PBO:0077790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis and ovary specific TOPAZ 1","termid":"PBO:0077790"}


id: PBO:0047751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha pseudogene 1","termid":"PBO:0047751"}


id: GO:0098911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a ventricular cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell action potential","termid":"GO:0098911"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: GO:1904407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:11991626","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"positively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide metabolic process","synonyms":[{"name":"activation of nitric oxide metabolic process","type":"narrow"},{"name":"activation of nitric oxide metabolism","type":"narrow"},{"name":"positive regulation of nitric oxide metabolism","type":"exact"},{"name":"up regulation of nitric oxide metabolic process","type":"exact"},{"name":"up regulation of nitric oxide metabolism","type":"exact"},{"name":"up-regulation of nitric oxide metabolic process","type":"exact"},{"name":"up-regulation of nitric oxide metabolism","type":"exact"},{"name":"upregulation of nitric oxide metabolic process","type":"exact"},{"name":"upregulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904407"}


id: GO:0048009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to an insulin-like growth factor receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"IGF receptor signaling pathway","type":"exact"},{"name":"IGF receptor signalling pathway","type":"exact"}],"termid":"GO:0048009"}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: FYPO:0002106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"viable stubby vegetative cell","synonyms":[{"name":"stubby viable cell during vegetative growth","type":"exact"},{"name":"stubby viable vegetative cell","type":"exact"},{"name":"viable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002106"}


id: PBO:0042404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14C","termid":"PBO:0042404"}


id: PBO:0029234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029234"}


id: GO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + methylphosphonate = alpha-D-ribose 1-methylphosphonate 5-triphosphate + adenine.","definition_xrefs":["PMID:22089136","GOC:dph","EC:2.7.8.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN0-6732","RHEA:34679"],"termid":"GO:0061693"}


id: SO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA sequence formed from the ligation of two sticky ends where the palindrome is broken and no longer comprises the recognition site and thus cannot be re-cut by the restriction enzymes used to create the sticky ends.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_region","termid":"SO:0001954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_assembly_scar","termid":"SO:0001953"}


id: GO:0120116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mature glucagon by proteolysis of the precursor proglucagon.","definition_xrefs":["PMID:28719828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"glucagon processing","termid":"GO:0120116"}


id: PATO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001123 relative power value (obsolete PATO:0001123)","termid":"PATO:0001123"}


id: PBO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ste11","termid":"PBO:0002559"}


id: GO:0036071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring a fucosyl group to an N-glycan. An N-glycan is the carbohydrate portion of an N-glycoprotein when attached to a nitrogen from asparagine or arginine side-chains.","definition_xrefs":["GOC:sart","PMID:19948734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosylation","termid":"GO:0036065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan fucosylation","synonyms":[{"name":"glycoprotein fucosylation","type":"related"}],"termid":"GO:0036071"}


id: GO:0019474
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-lysine breakdown to acetyl-CoA","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019474","terms_by_termid":{"GO:0033512":null}}


id: PBO:0063978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 12","termid":"PBO:0063978"}


id: GO:0005980
data:
  {"annotated_genes":["SJAG_02076","SJAG_03851","SJAG_04963","SJAG_06309","SJAG_01561","SJAG_00115","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99433],"is_not":false,"summary":null,"term":"GO:0005980"},{"annotations":[93744,86254,94741,104782,96406,105907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen metabolic process","termid":"GO:0005977"},{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_02076":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glycogen catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5941","MetaCyc:PWY-7662","MetaCyc:GLYCOCAT-PWY"],"synonyms":[{"name":"glycogen breakdown","type":"exact"},{"name":"glycogen catabolism","type":"exact"},{"name":"glycogen degradation","type":"exact"},{"name":"glycogenolysis","type":"exact"}],"termid":"GO:0005980","terms_by_termid":{"GO:0005980":null,"GO:0061723":null}}


id: PBO:0045261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1 pseudogene 1","termid":"PBO:0045261"}


id: GO:0007546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The events determining the somatic sexual phenotype after the initial transmission of that phenotype to soma-specific information pathways.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processes downstream of sex determination signal","termid":"GO:0007545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic processes downstream of sex determination signal","termid":"GO:0007546"}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 6 pseudogene","termid":"PBO:0048664"}


id: PBO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 5","termid":"PBO:0071328"}


id: PATO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigmoid","synonyms":[{"name":"S-shaped","type":"exact"},{"name":"sigmoidal","type":"exact"}],"termid":"PATO:0001878"}


id: GO:1903315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"negatively_regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"negatively_regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071941"],"is_obsolete":false,"name":"negative regulation of nitrogen cycle metabolic process","synonyms":[{"name":"down regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"down-regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"downregulation of nitrogen cycle metabolic process","type":"exact"},{"name":"inhibition of nitrogen cycle metabolic process","type":"narrow"}],"termid":"GO:1903315"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: GO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.","definition_xrefs":["PMID:8936405","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"outer acrosomal membrane","termid":"GO:0002081"}


id: PBO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Spindle Disanchored","termid":"PBO:0004330"}


id: RO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_overlaps","termid":"RO:0002490"},{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"RO:0002497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","termid":"RO:0002492"}


id: GO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKKK activity (obsolete GO:0051390)","synonyms":[{"name":"inactivation of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAPKKK activity","type":"exact"}],"termid":"GO:0051390"}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: PBO:0057908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3611","termid":"PBO:0057908"}


id: PBO:0039513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 1","termid":"PBO:0039513"}


id: MOD:01307
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:332#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphate labeled with biotin-HPDP","termid":"MOD:00639"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP -site S","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:01307"}


id: GO:1990187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained at mRNA.","definition_xrefs":["GOC:rb","PMID:22890846"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to mRNA (obsolete GO:1990187)","synonyms":[{"name":"protein localization to mRNA","type":"exact"}],"termid":"GO:1990187"}


id: PBO:0089316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate cleavage peptidase Icp55","termid":"PBO:0089316"}


id: PBO:0077352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 92","termid":"PBO:0077352"}


id: PBO:0085330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0085330"}


id: PBO:0061433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 2","termid":"PBO:0061433"}


id: PBO:0053738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 963","termid":"PBO:0053738"}


id: GO:1900089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["PMID:22307851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol biosynthetic process","termid":"GO:1900088"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inositol biosynthetic process","synonyms":[{"name":"down regulation of inositol anabolism","type":"exact"},{"name":"down regulation of inositol biosynthesis","type":"exact"},{"name":"down regulation of inositol biosynthetic process","type":"exact"},{"name":"down regulation of inositol formation","type":"exact"},{"name":"down regulation of inositol synthesis","type":"exact"},{"name":"down regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"down-regulation of inositol anabolism","type":"exact"},{"name":"down-regulation of inositol biosynthesis","type":"exact"},{"name":"down-regulation of inositol biosynthetic process","type":"exact"},{"name":"down-regulation of inositol formation","type":"exact"},{"name":"down-regulation of inositol synthesis","type":"exact"},{"name":"down-regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"down-regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"down-regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"down-regulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"downregulation of inositol anabolism","type":"exact"},{"name":"downregulation of inositol biosynthesis","type":"exact"},{"name":"downregulation of inositol biosynthetic process","type":"exact"},{"name":"downregulation of inositol formation","type":"exact"},{"name":"downregulation of inositol synthesis","type":"exact"},{"name":"downregulation of myo-inositol biosynthesis","type":"narrow"},{"name":"downregulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"downregulation of vitamin Bh biosynthesis","type":"exact"},{"name":"downregulation of vitamin Bh biosynthetic process","type":"exact"},{"name":"inhibition of inositol anabolism","type":"exact"},{"name":"inhibition of inositol biosynthesis","type":"exact"},{"name":"inhibition of inositol biosynthetic process","type":"narrow"},{"name":"inhibition of inositol formation","type":"exact"},{"name":"inhibition of inositol synthesis","type":"exact"},{"name":"inhibition of myo-inositol biosynthesis","type":"narrow"},{"name":"inhibition of myo-inositol biosynthetic process","type":"narrow"},{"name":"inhibition of vitamin Bh biosynthesis","type":"exact"},{"name":"inhibition of vitamin Bh biosynthetic process","type":"exact"},{"name":"negative regulation of inositol anabolism","type":"exact"},{"name":"negative regulation of inositol biosynthesis","type":"exact"},{"name":"negative regulation of inositol formation","type":"exact"},{"name":"negative regulation of inositol synthesis","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900089"}


id: PBO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SnoaL","termid":"PBO:0000134"}


id: PBO:0073648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salt inducible kinase 2","termid":"PBO:0073648"}


id: GO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the salivary gland to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in salivary gland development","termid":"GO:0060691"}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: PBO:0065881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB31, member RAS oncogene family","termid":"PBO:0065881"}


id: PBO:0027469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_NAD(P)H_oxidase_activity","termid":"PBO:0027469"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0003674","GO:0005488","GO:0098772"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: GO:0090308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090308"}


id: FYPO:0002214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with abnormal morphology (i.e. size, shape, or structure).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, abnormal germ tube morphology (obsolete FYPO:0002214)","synonyms":[{"name":"cell population inviable after spore germination, abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore population, abnormal germ tube morphology","type":"exact"},{"name":"inviable population of undivided germinated spores with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002214"}


id: PR:Q92350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase C6G9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.05","synonyms":[{"name":"Spom972h-pcd1","type":"exact"}],"termid":"PR:Q92350"}


id: GO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1->4)-alpha-D-glucan.","definition_xrefs":["EC:2.4.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"4-alpha-glucanotransferase activity","secondary_identifiers":["MetaCyc:RXN-1828","MetaCyc:RXN-9023","Reactome:R-HSA-71552","MetaCyc:AMYLOMALT-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 4-alpha-D-glycosyltransferase activity","type":"related"},{"name":"D-enzyme activity","type":"related"},{"name":"amylomaltase activity","type":"related"},{"name":"debranching enzyme maltodextrin glycosyltransferase activity","type":"related"},{"name":"dextrin glycosyltransferase activity","type":"related"},{"name":"dextrin transglycosylase activity","type":"related"},{"name":"disproportionating enzyme activity","type":"related"},{"name":"oligo-1,4-1,4-glucantransferase activity","type":"related"}],"termid":"GO:0004134"}


id: GO:1905600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:22848640","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905600"}


id: PBO:0080553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 12","termid":"PBO:0080553"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: PBO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G1_phase_during_nitrogen_starvation","termid":"PBO:0030737"}


id: PBO:0079126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 2","termid":"PBO:0079126"}


id: GO:0090640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves the two-step acylation of sn-glycero-3-phosphocholine to a phosphatidylcholine.","definition_xrefs":["PMID:27758859","MetaCyc:PWY-7470","PMID:24329598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from sn-glycero-3-phosphocholine","termid":"GO:0090640"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: GO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors.","definition_xrefs":["GOC:mtg_cardio","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hydrogen ion","termid":"GO:0003030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by chemoreceptor signaling","synonyms":[{"name":"detection of pH by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003022"}


id: PBO:0079677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Z","termid":"PBO:0079677"}


id: PBO:0026847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_tRNA_gene","termid":"PBO:0026847"}


id: PR:O13733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-terminal kinase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12984:SF3","OMA:SCHPO01548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.13","secondary_identifiers":["UniProtKB:O13733"],"synonyms":[{"name":"Spom972h-SCYL1","type":"exact"}],"termid":"PR:O13733"}


id: FYPO:0000430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal fermentation","synonyms":[{"name":"abnormal fermentation during mitotic cell cycle","type":"related"},{"name":"abnormal fermentation during vegetative growth","type":"exact"},{"name":"abnormal fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: abnormal","type":"related"}],"termid":"FYPO:0000430"}


id: PBO:0089145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, S-adenosylmethionine Pet802","termid":"PBO:0089145"}


id: FYPO:0000178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of cytokinesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of cytokinesis","synonyms":[{"name":"abnormal regulation of cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0000178"}


id: PBO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin X","termid":"PBO:0060345"}


id: PBO:0013761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II Urg1 (predicted)","termid":"PBO:0013761"}


id: GO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the direct addition of H2S, followed by the removal of 2 protons to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from H2S","termid":"GO:0044527"}


id: GO:0100036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates purine nucleotide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100036)","termid":"GO:0100036"}


id: PBO:0076149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component pseudogene 1","termid":"PBO:0076149"}


id: PBO:0079988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 26","termid":"PBO:0079988"}


id: GO:1905426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf","PMID:17244647"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905426)","synonyms":[{"name":"activation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain DA 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id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: GO:0046104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"thymidine metabolic process","synonyms":[{"name":"deoxyribosylthymine metabolic process","type":"exact"},{"name":"deoxyribosylthymine metabolism","type":"exact"},{"name":"thymidine metabolism","type":"exact"}],"termid":"GO:0046104"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: PBO:0089483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein","termid":"PBO:0089483"}


id: GO:0097576
data:
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id: PBO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion","termid":"PBO:0031672"}


id: FYPO:0000720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal fatty acid synthase activity","synonyms":[{"name":"abnormal FAS activity","type":"exact"}],"termid":"FYPO:0000720"}


id: PR:P25009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puc1 gene.","definition_xrefs":["UniProtKB:P25009","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin puc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.01c","synonyms":[{"name":"Spom972h-puc1","type":"exact"}],"termid":"PR:P25009"}


id: PBO:0068220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 527","termid":"PBO:0068220"}


id: PBO:0029808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029808"}


id: PBO:0083938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose permease; required for utilization of galactose; also able to transport glucose","termid":"PBO:0083938"}


id: FYPO:0003075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity","termid":"FYPO:0003075"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["CL:0000333","PMID:17076275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: PBO:0111952
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0111952"}


id: GO:0098747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The slow, second phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on high affinity calcium sensors and decays slowly, typically with a decay constant of over 100ms. The underlying molecular mechanisms of this process are distinct from those of the earlier, fast phase of release.","definition_xrefs":["GOC:parl","GOC:pad","GOC:dos","PMID:7809151","PMID:7954835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"slow, calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:0098747"}


id: GO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactomannan, a polysaccharide composed of D-galactosyl and D-mannosyl. The mannosyl units form the backbone structure (a linear main chain) with the D-galactosyl as single side units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactomannan metabolic process","termid":"GO:0051069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactomannan catabolic process","termid":"GO:0051682"}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: PBO:0029660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029660"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: GO:1905665
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98274],"is_not":false,"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["PMID:17640527","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion import","termid":"GO:0090280"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion import across plasma membrane","termid":"GO:1905664"},{"relation_name":"positively_regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of calcium ion import across plasma membrane","type":"exact"},{"name":"upregulation of calcium ion import across plasma membrane","type":"exact"}],"termid":"GO:1905665","terms_by_termid":{"GO:1905665":null}}


id: FYPO:0005502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription","synonyms":[{"name":"abnormal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0005502"}


id: GO:0032543
data:
  {"annotated_genes":["SJAG_02721","SJAG_05560","SJAG_01829","SJAG_02977","SJAG_02201","SJAG_03550","SJAG_00231","SJAG_03297","SJAG_04918","SJAG_01303","SJAG_02353","SJAG_01520","SJAG_04788","SJAG_04494","SJAG_04738","SJAG_01797","SJAG_01767","SJAG_01630","SJAG_04019","SJAG_00653","SJAG_02452","SJAG_01413","SJAG_02071","SJAG_02428","SJAG_06253","SJAG_04889","SJAG_02302","SJAG_02236","SJAG_04285","SJAG_04856","SJAG_03065","SJAG_03284","SJAG_03459","SJAG_01577","SJAG_03402","SJAG_00060","SJAG_00103","SJAG_04409","SJAG_05320","SJAG_00799","SJAG_03461","SJAG_03584","SJAG_04173","SJAG_04490","SJAG_00148","SJAG_00308","SJAG_01045","SJAG_04929","SJAG_02762","SJAG_02856","SJAG_03040","SJAG_01352","SJAG_02359","SJAG_05244","SJAG_00860","SJAG_04281","SJAG_06110","SJAG_05249","SJAG_05271","SJAG_04493","SJAG_03071","SJAG_00844","SJAG_04351","SJAG_04244","SJAG_00286","SJAG_03649","SJAG_03053","SJAG_00944","SJAG_05218","SJAG_02777","SJAG_04473","SJAG_04094","SJAG_04753","SJAG_00889","SJAG_05221","SJAG_02324","SJAG_01468","SJAG_02643","SJAG_00659","SJAG_01518","SJAG_05008","SJAG_00086","SJAG_00936","SJAG_02615","SJAG_00105","SJAG_03232","SJAG_04216","SJAG_00315","SJAG_05573","SJAG_04064","SJAG_01727","SJAG_01591","SJAG_03585","SJAG_01478","SJAG_02836","SJAG_01719","SJAG_04164","SJAG_00628","SJAG_04207","SJAG_07009","SJAG_04367","SJAG_03636","SJAG_16456","SJAG_04840","SJAG_03176","SJAG_05270","SJAG_04959","SJAG_02067","SJAG_01806","SJAG_01463","SJAG_01734","SJAG_04689","SJAG_01473","SJAG_04893","SJAG_00782","SJAG_01368","SJAG_04378","SJAG_03322","SJAG_01517","SJAG_03192","SJAG_04862","SJAG_00513","SJAG_04635","SJAG_00497","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84458,84546,85044,85204,85647,86050,86104,87612,87714,87796,88130,88225,88940,89959,90328,90608,90614,90626,91382,91486,92066,92079,92357,92396,92736,92771,92801,93038,94101,94121,94127,94128,94226,94356,95227,97219,97411,97422,97581,98060,98397,98443,98742,99211,99461,99489,99570,99820,100066,100132,100489,100983,101825,101972,102154,102515,102882,103241,103326,104076,104215,104218,104276,104313,104360,104501,104606,104721,105495,105976,106270,106516,106802,106910,107228,107415,108273,108352,108489,108590,108846,108992,109019,109580,110432,110707,110823,111351,111477,111523,111696,111782,112129,112161,112272,112380,113105,113212,113485,113998,114112,114151,114470],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[89862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070143"},{"annotations":[103346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070144"},{"annotations":[114126],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070146"},{"annotations":[93149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070150"},{"annotations":[90800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070158"},{"annotations":[99012,108274,107648,77907,108993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[104471,89795,87156,101712,98754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[100829,91641,94785,92080,98196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[93434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070183"},{"annotations":[93808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070185"},{"annotations":[98038,94836,108796],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[96582],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. 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id: GO:0061263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular mesangial cell in the mesonephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell development","termid":"GO:0072144"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell development","termid":"GO:0061263"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23242647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: PBO:0065318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 41","termid":"PBO:0065318"}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:go_curators","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PBO:0064951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 2","termid":"PBO:0064951"}


id: GO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 member 1 taste receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor binding","termid":"GO:0031883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 member 1 taste receptor binding","synonyms":[{"name":"type 1 member 1 taste receptor ligand","type":"narrow"}],"termid":"GO:0031884"}


id: GO:1902104
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902101"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"is_a","term_name":"positive regulation of meiotic chromosome separation","termid":"GO:1905134"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"activation of metaphase/anaphase transition of meiotic cell cycle","type":"narrow"},{"name":"positive regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"up regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"up regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"up-regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"up-regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"upregulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"upregulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"}],"termid":"GO:1902104","terms_by_termid":{"GO:1905191":null}}


id: GO:0089722
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108385,89473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpytuvate across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transport","termid":"GO:0015714"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089722","terms_by_termid":{"GO:1990536":null}}


id: GO:0031422
data:
  {"annotated_genes":["SJAG_03898","SJAG_02262","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91008,92148,100541],"is_not":false,"summary":null,"term":"GO:0031422"}]},"cv_name":"cellular_component","definition":"A complex containing a RecQ family helicase and a topoisomerase III homologue (a member of the topoisomerase type IA subfamily); may also include one or more additional proteins; conserved from E. coli to human.","definition_xrefs":["PMID:15889139","GOC:krc","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02262":null,"SJAG_03898":null,"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"RecQ family helicase-topoisomerase III complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RecQ helicase-Topo III complex","type":"exact"},{"name":"Sgs1-Top3 complex","type":"narrow"}],"termid":"GO:0031422","terms_by_termid":{"GO:0031422":null}}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:BHF","GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: PBO:0091254
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS3","termid":"PBO:0091254"}


id: PBO:0063172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXX non-homologous end joining factor","termid":"PBO:0063172"}


id: PBO:0012245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012245"}


id: PBO:0057578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 875","termid":"PBO:0057578"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 carboxylates.","definition_xrefs":["EC:3.1.1.26","MetaCyc:GALACTOLIPASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["RHEA:13189"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: GO:0016497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"substance K receptor activity","synonyms":[{"name":"neurokinin A receptor activity","type":"exact"},{"name":"neuromedin L receptor activity","type":"exact"}],"termid":"GO:0016497"}


id: PBO:0069529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 798, pseudogene","termid":"PBO:0069529"}


id: PBO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 21","termid":"PBO:0072492"}


id: PBO:0043751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 6","termid":"PBO:0043751"}


id: SO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence element that recruits a ribosomal subunit to internal mRNA for translation initiation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_ribosome_entry_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Internal_ribosome_entry_site"],"synonyms":[{"name":"IRES","type":"exact"},{"name":"internal ribosomal entry sequence","type":"exact"},{"name":"internal ribosomal entry site","type":"exact"},{"name":"internal ribosome entry sequence","type":"related"},{"name":"internal ribosome entry site","type":"exact"}],"termid":"SO:0000243"}


id: PBO:0034247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_marker_for","termid":"PBO:0034247"}


id: PBO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10B","termid":"PBO:0047420"}


id: GO:0103101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-methylthioheptylhydroximate = H+ + 6-methylthiohexyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4326"],"termid":"GO:0103101"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: GO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: GO:0099545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}


id: PBO:0053662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 839","termid":"PBO:0053662"}


id: GO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + maltose(out) = protein histidine + maltose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0016740","GO:0005215","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-maltose phosphotransferase system transporter activity","synonyms":[{"name":"maltose PTS transporter activity","type":"exact"}],"termid":"GO:0022873"}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["UniProtKB:G2TRP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: FYPO:0005735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased during mitotic M-phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to kinetochore during vegetative growth","termid":"FYPO:0003003"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"increased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"increased protein localization to kinetochore during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005735"}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: GO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3B, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Mad-Max-mSin3B complex","termid":"GO:0070440"}


id: PR:Q09781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps101 gene.","definition_xrefs":["UniProtKB:Q09781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.02c","synonyms":[{"name":"S3aE-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps101","type":"exact"}],"termid":"PR:Q09781"}


id: PBO:0054553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1954","termid":"PBO:0054553"}


id: PBO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 24","termid":"PBO:0070489"}


id: PBO:0040367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 4","termid":"PBO:0040367"}


id: GO:0140810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H1 L-arginyl (position 54)= histone H1 L-citrullyl (position 54) + NH4+, resulting in histone H1 citrullination at position 54.","definition_xrefs":["PMID:24463520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"histone H1R54 arginine deiminase activity","synonyms":[{"name":"H1-R54 citrullination","type":"exact"},{"name":"histone H1-R54 deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H1-R54 specific)","type":"exact"}],"termid":"GO:0140810"}


id: PBO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl5","termid":"PBO:0036492"}


id: GO:0047816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NAD+ = D-arabinono-1,4-lactone + NADH.","definition_xrefs":["MetaCyc:D-ARABINOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0045290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:20457"],"synonyms":[{"name":"D-arabinose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-pentose-dehydrogenase activity","type":"related"},{"name":"arabinose(fucose)dehydrogenase activity","type":"related"}],"termid":"GO:0047816"}


id: GO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of myosin II filament organization","synonyms":[{"name":"regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"regulation of myosin II filament organisation","type":"exact"}],"termid":"GO:0043519"}


id: GO:1902507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of thiazole synthase activity.","definition_xrefs":["PMID:12650933","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"thiazole synthase complex","termid":"GO:1902507"}


id: GO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands.","definition_xrefs":["GOC:sr","FMA:9905","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autonomic nervous system development","termid":"GO:0048483"}


id: PBO:0064500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C pseudogene 1","termid":"PBO:0064500"}


id: PBO:0069655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 932, pseudogene","termid":"PBO:0069655"}


id: PBO:0049171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAPL long non-coding downstream RNA","termid":"PBO:0049171"}


id: FYPO:0009081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of potassium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to potassium chloride and MMS","type":"exact"},{"name":"resistance to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and MMS in combination","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to potassium chloride and MMS","type":"exact"},{"name":"resistant to potassium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009081"}


id: PBO:0074730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 88","termid":"PBO:0074730"}


id: PBO:0077859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3","termid":"PBO:0077859"}


id: PBO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; structure defines a new subfamily of the split beta-alpha-beta sandwiches; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YML108W is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086007"}


id: PBO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Sec14","termid":"PBO:0018226"}


id: PBO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC27 antisense RNA 1","termid":"PBO:0045248"}


id: GO:2000945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of amylopectin metabolic process","termid":"GO:2000942"},{"relation_name":"regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of amylopectin catabolic process","synonyms":[{"name":"regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000945"}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: GO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The plasma membrane fusion process that results in fusion of mononuclear osteoclasts to form a multinuclear osteoclast.","definition_xrefs":["CL:0000779","GOC:BHF","GOC:mah","PMID:12713016","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"multinuclear osteoclast differentiation","termid":"GO:0072674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast fusion","termid":"GO:0072675"}


id: GO:1902956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:23530063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902956"}


id: PBO:0110423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 2","termid":"PBO:0110423"}


id: GO:0097122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A2-CDK1 complex","termid":"GO:0097122"}


id: GO:0021816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rearrangements of the microtubule cytoskeleton that result in the extension of a leading process, where this process is involved in the movement of cells along radial glial cells.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration","termid":"GO:0021815"},{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration","termid":"GO:0021816"}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: GO:0051238
data:
  {"annotated_genes":["SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"}]},"cv_name":"biological_process","definition":"The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sequestering of metal ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238","terms_by_termid":{"GO:0006880":null}}


id: GO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell mediated immunity","synonyms":[{"name":"down regulation of T cell mediated immunity","type":"exact"},{"name":"down-regulation of T cell mediated immunity","type":"exact"},{"name":"downregulation of T cell mediated immunity","type":"exact"},{"name":"inhibition of T cell mediated immunity","type":"narrow"},{"name":"negative regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of T-cell mediated immunity","type":"exact"},{"name":"negative regulation of T-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002710"}


id: PBO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified in S. pombe only","termid":"PBO:0000067"}


id: GO:0047759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanal + CoA + NAD(P)+ = butanoyl-CoA + NAD(P)H + H+.","definition_xrefs":["MetaCyc:BUTANAL-DEHYDROGENASE-RXN","EC:1.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"butanal dehydrogenase activity","synonyms":[{"name":"butanal:NAD(P)+ oxidoreductase (CoA-acylating)","type":"related"}],"termid":"GO:0047759"}


id: GO:0103004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 9,10-epoxystearate + O2 + NADPH = 9,10-epoxy-18-hydroxystearate + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"9,10-epoxystearate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9805"],"termid":"GO:0103004"}


id: PBO:0049602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 5","termid":"PBO:0049602"}


id: GO:0032081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type II site-specific deoxyribonuclease activity","termid":"GO:0032085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type II restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type II restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032081"}


id: PR:O14232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superkiller viralicidic activity 2-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00545","PANTHER:PTHR11752:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mtr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.16c","secondary_identifiers":["UniProtKB:O14232"],"synonyms":[{"name":"Spom972h-SKIV2L2","type":"exact"}],"termid":"PR:O14232"}


id: PBO:0072541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 71","termid":"PBO:0072541"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: GO:0048824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a pigment cell precursor.","definition_xrefs":["GOC:dgh","PMID:16499899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell precursor differentiation","synonyms":[{"name":"chromatophore precursor differentiation","type":"exact"}],"termid":"GO:0048824"}


id: PBO:0040811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 2","termid":"PBO:0040811"}


id: PBO:0028190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028190"}


id: MOD:00694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a halogen atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogen containing residue","synonyms":[{"name":"HalRes","type":"exact"},{"name":"halogenated residue","type":"exact"}],"termid":"MOD:00694"}


id: GO:0023039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a physical damage signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by physical damage (obsolete GO:0023039)","synonyms":[{"name":"signal initiation by physical damage","type":"exact"}],"termid":"GO:0023039"}


id: GO:2001126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"positively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational frameshifting","termid":"GO:2001126"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0076169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1B member 1","termid":"PBO:0076169"}


id: PBO:0077532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 245","termid":"PBO:0077532"}


id: GO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-idonate + NADP+ = 5-dehydro-D-gluconate + NADPH.","definition_xrefs":["MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate 2-dehydrogenase activity (obsolete GO:0050027)","secondary_identifiers":["RHEA:21176","EC:1.1.1.128"],"synonyms":[{"name":"5-keto-D-gluconate 2-reductase activity","type":"related"},{"name":"5-ketogluconate 2-reductase activity","type":"related"},{"name":"5-ketoglucono-idono-reductase activity","type":"related"},{"name":"5KGR","type":"related"},{"name":"L-idonate 2-dehydrogenase activity","type":"exact"},{"name":"L-idonate dehydrogenase activity","type":"related"},{"name":"L-idonate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"reductase, 5-ketogluconate 5- (L-idonate-forming)","type":"related"}],"termid":"GO:0050027"}


id: GO:0062247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A intracellular vesicle that is part of a chloroplast.","definition_xrefs":["PMID:32245810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast vesicle","termid":"GO:0062247"}


id: PBO:0053879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1157","termid":"PBO:0053879"}


id: FYPO:0006666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a longer distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PMID:29697047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"increased spatial extent of double-strand break processing","synonyms":[{"name":"increased spatial extent of DSB processing","type":"exact"},{"name":"increased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"increased spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0006666"}


id: GO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the heart.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart growth","termid":"GO:0060419"}


id: FYPO:0001716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal succinate import","termid":"FYPO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased succinate import","synonyms":[{"name":"decreased succinate import across plasma membrane","type":"exact"},{"name":"decreased succinate import during mitotic cell cycle","type":"related"},{"name":"decreased succinate import during vegetative growth","type":"exact"},{"name":"decreased succinate import into cell","type":"exact"},{"name":"decreased succinate uptake","type":"exact"},{"name":"decreased succinic acid import","type":"related"},{"name":"reduced succinate import","type":"exact"}],"termid":"FYPO:0001716"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: PBO:0089379
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier protein] reductase","termid":"PBO:0089379"}


id: PBO:0044666
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCXR divergent transcript","termid":"PBO:0044666"}


id: GO:0034620
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id: GO:0008794
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id: PBO:0083969
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id: PBO:0078655
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 8-1","termid":"PBO:0078655"}


id: GO:0018491
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id: PBO:0044830
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id: PBO:0061069
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein pseudogene 1","termid":"PBO:0061069"}


id: GO:0010604
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id: GO:0050682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AF-2 protein domain, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"AF-2 domain binding","termid":"GO:0050682"}


id: PBO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transporter Atm1","termid":"PBO:0002170"}


id: GO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic assembly at neuromuscular junction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"negative regulation of neuromuscular junction development","termid":"GO:1904397"},{"relation_name":"negatively_regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"down regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"down-regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"downregulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"inhibition of synaptic growth at neuromuscular junction","type":"narrow"},{"name":"negative regulation of synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0045886"}


id: PBO:0072107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 5","termid":"PBO:0072107"}


id: GO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:ejs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal ganglion cell axon guidance","synonyms":[{"name":"retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:0031290"}


id: GO:0150166
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 acetylation (obsolete GO:0150166)","termid":"GO:0150166"}


id: PBO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL2 pseudogene 1","termid":"PBO:0072703"}


id: GO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a shelterin complex. A shelterin complex is a nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"shelterin complex assembly","synonyms":[{"name":"Pot1 complex assembly","type":"related"},{"name":"Pot1-Tpz1 complex assembly","type":"related"},{"name":"shelterin complex formation","type":"related"},{"name":"telosome assembly","type":"exact"}],"termid":"GO:0071573"}


id: PBO:0079629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q1 antisense RNA 1","termid":"PBO:0079629"}


id: PBO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 19","termid":"PBO:0045829"}


id: GO:0075102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont MAP kinase-mediated signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont MAP kinase-mediated signal transduction (obsolete GO:0075102)","termid":"GO:0075102"}


id: GO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + 3 H+ + 3 malonyl-CoA + NADPH = 6-methylsalicylate + 3 CO2 + 4 CoA + H2O + NADP+.","definition_xrefs":["EC:2.3.1.165","RHEA:12240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"6-methylsalicylic acid synthase activity","secondary_identifiers":["KEGG_REACTION:R07253","MetaCyc:2.3.1.165-RXN"],"synonyms":[{"name":"6-MSAS activity","type":"related"},{"name":"MSAS activity","type":"related"},{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl-reducing, thioester-hydrolysing and cyclizing)","type":"related"}],"termid":"GO:0050641"}


id: GO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD63.","definition_xrefs":["PMID:7629079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA3-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0071081"}


id: GO:0072517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that forms in the cytoplasm of the host cell, in which virus assembly takes place.","definition_xrefs":["PMID:20374631","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral assembly compartment","secondary_identifiers":["GO:0072516"],"synonyms":[{"name":"host cell viral assembly site","type":"related"},{"name":"host cell virion assembly compartment","type":"exact"},{"name":"viral assembly compartment","type":"exact"},{"name":"viral assembly site","type":"related"},{"name":"virion assembly compartment","type":"exact"}],"termid":"GO:0072517"}


id: PBO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthetase Ade2","termid":"PBO:0002618"}


id: PBO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 1","termid":"PBO:0005412"}


id: PBO:0038489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 11","termid":"PBO:0038489"}


id: GO:0102556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dammarenediol-II + NADPH + H+ + O2 = (20S)-protopanaxadiol + NADP + H2O.","definition_xrefs":["EC:1.14.14.120","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dammarenediol 12-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14975","RHEA:38579"],"termid":"GO:0102556"}


id: PATO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's lacking photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoinsensitive","synonyms":[{"name":"photoresistant","type":"related"}],"termid":"PATO:0000546"}


id: GO:0005385
data:
  {"annotated_genes":["SJAG_01990","SJAG_01803","SJAG_00222","SJAG_03528","SJAG_04185","SJAG_00328","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86618,89918,89919,97352,100441,110461],"is_not":false,"summary":null,"term":"GO:0005385"},{"annotations":[100305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000006"}]},"cv_name":"molecular_function","definition":"Enables the transfer of zinc (Zn) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"zinc ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5654125","Reactome:R-HSA-442405","Reactome:R-HSA-437085","Reactome:R-HSA-442317","Reactome:R-HSA-442345","Reactome:R-HSA-437136","Reactome:R-HSA-442387","Reactome:R-HSA-435375","Reactome:R-HSA-442422","RHEA:29351","Reactome:R-HSA-437139","Reactome:R-HSA-442393","Reactome:R-HSA-9820566","Reactome:R-HSA-437084","MetaCyc:RXN0-12","Reactome:R-HSA-435366"],"synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"related"},{"name":"zinc, cadmium uptake permease activity","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"},{"name":"zinc, iron permease activity","type":"narrow"}],"termid":"GO:0005385","terms_by_termid":{"GO:0000006":null,"GO:0005385":null}}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0052744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 36","termid":"PBO:0052744"}


id: PBO:0087245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein of unknown function; predicted to be palmitoylated; overproduction suppresses growth inhibition caused by exposure to immunosuppressant leflunomide; MLF3 has a paralog, VHS2, that arose from the whole genome duplication","termid":"PBO:0087245"}


id: PBO:0004300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis protein Abc1/Coq8","termid":"PBO:0004300"}


id: GO:1990168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K33-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["PMID:23827681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K33-linked deubiquitination","termid":"GO:1990168"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: GO:1904815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["PMID:19487455","GOC:BHF_telomere","GOC:nc","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromosome, telomeric region","termid":"GO:1904814"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"down regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to telomere","type":"exact"},{"name":"down-regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to telomere","type":"exact"},{"name":"downregulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to telomere","type":"exact"},{"name":"inhibition of protein localisation to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to telomere","type":"narrow"},{"name":"negative regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"negative regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904815"}


id: PBO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin","termid":"PBO:0046445"}


id: PBO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 5","termid":"PBO:0048714"}


id: PBO:0069878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1165, pseudogene","termid":"PBO:0069878"}


id: PBO:0063522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prodynorphin","termid":"PBO:0063522"}


id: PBO:0111344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNA associated protein Dip2","termid":"PBO:0111344"}


id: MOD:01421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a serine hydroxyl with the carbonyl of the preceding residue to form an oxazole or oxazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: PBO:0028263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_queuosine_level_in_tRNA","termid":"PBO:0028263"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: GO:1903304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:mr","PMID:15804508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of pyruvate kinase activity","termid":"GO:1903302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyruvate kinase activity","synonyms":[{"name":"activation of ATP:pyruvate 2-O-phosphotransferase activity","type":"narrow"},{"name":"activation of phosphoenol transphosphorylase activity","type":"narrow"},{"name":"activation of phosphoenolpyruvate kinase activity","type":"narrow"},{"name":"activation of pyruvate kinase activity","type":"narrow"},{"name":"positive regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"positive regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"positive regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"up regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"up regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up regulation of pyruvate kinase activity","type":"exact"},{"name":"up-regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"up-regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"up-regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up-regulation of pyruvate kinase activity","type":"exact"},{"name":"upregulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"upregulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"upregulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"upregulation of pyruvate kinase activity","type":"exact"}],"termid":"GO:1903304"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["PMID:23645161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773","GO:0032991"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: PBO:0089814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex sigma subunit Aps2","termid":"PBO:0089814"}


id: PBO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15 receptor subunit alpha","termid":"PBO:0051570"}


id: PBO:0059999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 19","termid":"PBO:0059999"}


id: PBO:0003766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin, nuclear import receptor Mtr10 (predicted)","termid":"PBO:0003766"}


id: GO:0039511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host interferon receptor.","definition_xrefs":["GOC:bf","UniProtKB-KW:KW-1091","GOC:sp","VZ:843"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host interferon receptor activity (obsolete GO:0039511)","synonyms":[{"name":"down-regulation by virus of host interferon receptor activity","type":"exact"},{"name":"downregulation by virus of host interferon receptor activity","type":"exact"},{"name":"inhibition by virus of host interferon receptor activity","type":"narrow"},{"name":"inhibition of host interferon receptors by virus","type":"exact"},{"name":"negative regulation by virus of host interferon receptor activity","type":"exact"}],"termid":"GO:0039511"}


id: GO:0099079
data:
  {"annotated_genes":["SJAG_02566","SJAG_02700","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95017,97872,101254],"is_not":false,"summary":null,"term":"GO:0099079"}]},"cv_name":"cellular_component","definition":"An amorphous cytoskeletal structure consisting of aggregated actin filaments and associated proteins (including fibrin and capping protein) in which there is little or no actin filament turnover. In yeast (S. pombe and S. cerevisiae) these are found only in quiescent cells and are thought to serve as a reserve store of actin.","definition_xrefs":["PMID:16914523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02566":null,"SJAG_02700":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099079","terms_by_termid":{"GO:0099079":null}}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115649],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-serine to form peptidyl-O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine sulfation","termid":"GO:0050984"}


id: PBO:0091874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter","termid":"PBO:0091874"}


id: GO:0070409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:mah","GOC:rph","CHEBI:17672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoyl phosphate metabolic process","termid":"GO:0070408"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate biosynthetic process","synonyms":[{"name":"carbamoyl phosphate anabolism","type":"exact"},{"name":"carbamoyl phosphate biosynthesis","type":"exact"},{"name":"carbamoyl phosphate formation","type":"exact"},{"name":"carbamoyl phosphate synthesis","type":"exact"},{"name":"carbamyl phosphate biosynthetic process","type":"exact"}],"termid":"GO:0070409"}


id: PBO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-7","termid":"PBO:0052924"}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: FYECO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium azide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaN3","synonyms":[{"name":"+ respiratory chain inhibitor","type":"related"},{"name":"+ sodium azide","type":"exact"}],"termid":"FYECO:0000380"}


id: GO:0015833
data:
  {"annotated_genes":["SJAG_00922","SJAG_01983","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91668,99143,104116],"is_not":false,"summary":null,"term":"GO:0015833"}]},"cv_name":"biological_process","definition":"The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peptide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015833","terms_by_termid":{"GO:0015833":null}}


id: PATO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001062 absolute elasticity (obsolete PATO:0001062)","termid":"PATO:0001062"}


id: GO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process directed at removing immune complexes from the body. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance","termid":"GO:0002434"}


id: GO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune system process","termid":"GO:0002682"}


id: PBO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 31","termid":"PBO:0072467"}


id: PBO:0045865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 4","termid":"PBO:0045865"}


id: GO:0102487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dUTP + 2 H2O = dUMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz","EC:3.6.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete dUTP phosphohydrolase activity (obsolete GO:0102487)","secondary_identifiers":["MetaCyc:RXN-14199"],"termid":"GO:0102487"}


id: GO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (dicarboxylate or tricarboxylate)(out) + Na+(out) = (dicarboxylate or tricarboxylate)(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:dicarboxylate/tricarboxylate symporter activity (obsolete GO:0005311)","synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate cotransporter activity","type":"broad"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"exact"}],"termid":"GO:0005311"}


id: PR:O94520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.03c","synonyms":[{"name":"Spom972h-emc4","type":"exact"}],"termid":"PR:O94520"}


id: GO:0043227
data:
  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