# terms

id: PBO:0050539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1","termid":"PBO:0050539"}


id: GO:0070556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIID complex that contains the TBP-associated factor TAF4B (also known as TAFII105 in human), a cell-type-specific variant of TAF4.","definition_xrefs":["PMID:8858156","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIID complex","termid":"GO:0005669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TAF4B-containing transcription factor TFIID complex","synonyms":[{"name":"TFIID complex, B-cell specific","type":"related"}],"termid":"GO:0070556"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: PBO:0091898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose:proton symporter, unknown specificity Ght8","termid":"PBO:0091898"}


id: PATO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased life span","synonyms":[{"name":"low life span","type":"exact"}],"termid":"PATO:0001604"}


id: FYPO:0008152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of transcribed  cryptic unstable trancripts (CUTs) measured in a cell is  normal  (i.e. indistinguishable from wild type).  Total CUT RNA or a CUT transcribed from a specific locus may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal CUT RNA level","termid":"FYPO:0008152"}


id: PBO:0069033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 278, pseudogene","termid":"PBO:0069033"}


id: RO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","termid":"RO:0002503"}


id: GO:0038037
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors.","definition_xrefs":["GOC:al","PMID:10713101","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G protein-coupled receptor dimeric complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled receptor dimer","type":"exact"},{"name":"G-protein coupled receptor dimeric complex","type":"exact"},{"name":"GPCR dimer","type":"exact"}],"termid":"GO:0038037","terms_by_termid":{"GO:0038038":null}}


id: GO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by a neurotransmitter. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}


id: GO:0090215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090215)","termid":"GO:0090215"}


id: SO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid rRNA is an RNA component of the small or large subunits of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA","synonyms":[{"name":"plastid rRNA","type":"exact"}],"termid":"SO:0002346"}


id: PBO:0052214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 1","termid":"PBO:0052214"}


id: PBO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 47","termid":"PBO:0070817"}


id: GO:0006901
data:
  {"annotated_genes":["SJAG_00906","SJAG_04615","SJAG_03268","SJAG_04391","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113824,89359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"},{"annotations":[91657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048208"},{"annotations":[106252,104866],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"vesicle budding from membrane","termid":"GO:0006900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_03268":null,"SJAG_04391":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"vesicle coating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat assembly","type":"broad"}],"termid":"GO:0006901","terms_by_termid":{"GO:0003400":null,"GO:0048205":null,"GO:0048208":null}}


id: FYPO:0006655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the unwinding of G-quadruplex DNA structures does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished G-quadruplex DNA unwinding","synonyms":[{"name":"G-quadruplex DNA unwinding abolished","type":"exact"},{"name":"abolished G-quadruplex DNA unwinding during mitotic cell cycle","type":"related"},{"name":"abolished G-quadruplex DNA unwinding during vegetative growth","type":"exact"},{"name":"abolished G-quartet DNA unwinding","type":"exact"},{"name":"abolished G4 DNA unwinding","type":"exact"}],"termid":"FYPO:0006655"}


id: PATO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collapsed","termid":"PATO:0001478"}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84463,98731],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: PR:O14017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.14c gene.","definition_xrefs":["UniProtKB:O14017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.14c","synonyms":[{"name":"Spom972h-SPAC29A4.14c","type":"exact"}],"termid":"PR:O14017"}


id: GO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to protein stimulus (obsolete GO:0071445)","synonyms":[{"name":"cellular response to protein stimulus","type":"exact"}],"termid":"GO:0071445"}


id: PBO:0017779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly protein Emi5 (predicted)","termid":"PBO:0017779"}


id: PBO:0047748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 1","termid":"PBO:0047748"}


id: PBO:0057095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 191","termid":"PBO:0057095"}


id: PBO:0085260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral peroxisomal membrane protein; involved in controlling peroxisome size and number, interacts with Pex25p; PEX27 has a paralog, PEX25, that arose from the whole genome duplication","termid":"PBO:0085260"}


id: FYPO:0000903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule shrinkage during vegetative growth","type":"related"},{"name":"increased microtubule stability during vegetative growth","type":"related"},{"name":"reduced rate of microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0000903"}


id: GO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions downstream of the MRN complex to promote DNA repair and the G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and is composed of SOSS-B (SOSS-B1/OBFC2B or SOSS-B2/OBFC2A), SOSS-A/INTS3 and SOSS-C/C9orf80.","definition_xrefs":["PMID:19683501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SOSS complex","termid":"GO:0070876"}


id: PBO:0084463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; interacts with Ssk1p, leading to autophosphorylation and activation of Ssk2p which phosphorylates Pbs2p; also mediates actin cytoskeleton recovery from osmotic stress; a HOG-independent function of Ssk2p mediates the calcium-sensitive phenotype of the ptp2 msg5 double disruptant; SSK2 has a paralog, SSK22, that arose from the whole genome duplication","termid":"PBO:0084463"}


id: PBO:0058592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-3","termid":"PBO:0058592"}


id: GO:0070370
data:
  {"annotated_genes":["SJAG_04187","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100336,100444],"is_not":false,"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of a cell in response to high temperatures.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat acclimation","termid":"GO:0010286"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular heat acclimation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular thermotolerance","type":"exact"}],"termid":"GO:0070370","terms_by_termid":{"GO:0070370":null}}


id: PBO:0049083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137C","termid":"PBO:0049083"}


id: GO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"roof of mouth development","synonyms":[{"name":"palatum development","type":"exact"}],"termid":"GO:0060021"}


id: PBO:0108925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFC1 pseudogene 1","termid":"PBO:0108925"}


id: PBO:0039281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 10, pseudogene","termid":"PBO:0039281"}


id: PBO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to predicted tyrosine phosphatases Oca1p and Siw14p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL056W is not an essential gene","termid":"PBO:0086002"}


id: GO:0018344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a geranylgeranyl group to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenylation","termid":"GO:0018342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein geranylgeranylation","secondary_identifiers":["GO:0018348"],"synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"narrow"},{"name":"protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:0018344"}


id: GO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"granular component","secondary_identifiers":["NIF_Subcellular:sao1217793903"],"synonyms":[{"name":"pars granulosa","type":"broad"}],"termid":"GO:0001652"}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: GO:0016714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced pteridine and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","secondary_identifiers":["EC:1.14.16.-"],"termid":"GO:0016714"}


id: FYPO:0001634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of tryptophan measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tryptophan level","termid":"FYPO:0001643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar tryptophan level","synonyms":[{"name":"normal level of tryptophan in vacuole","type":"exact"},{"name":"normal vacuolar tryptophan level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tryptophan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001634"}


id: GO:0106361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-beta-L-rhamnose + L-arginyl-[protein] = dTDP + H+ + N(omega)-(L-rhamnosyl)-L-arginyl-[protein].","definition_xrefs":["PMID:25686373","RHEA:66692","GOC:sp","PMID:26060278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-arginine rhamnosyltransferase activity","termid":"GO:0106361"}


id: FYPO:0000796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased glycerol dehydrogenase activity","termid":"FYPO:0000796"}


id: FYPO:0007523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to oxidative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to oxidative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to oxidative stress","type":"exact"},{"name":"decreased protein level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007523"}


id: PBO:0053796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1050","termid":"PBO:0053796"}


id: GO:1905810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of excitatory synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905810"}


id: FYPO:0001387
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115608,115666,115667,115668],"is_not":false,"summary":null,"term":"FYPO:0001387"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature higher than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability at high temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_04464","SJAG_03575","SJAG_03351"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased viability at high temperature","type":"exact"},{"name":"loss of cell population viability at high temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at high temperature","type":"exact"}],"termid":"FYPO:0001387","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0001387":null}}


id: PBO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBPL divergent transcript","termid":"PBO:0061603"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_04593","SJAG_01924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90531,110282],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: PBO:0055139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2558","termid":"PBO:0055139"}


id: GO:1905583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannose stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to mannose","termid":"GO:1905582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mannose","termid":"GO:1905583"}


id: GO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.","definition_xrefs":["UM-BBD_pathwayID:nta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nitrilotriacetate metabolic process","synonyms":[{"name":"nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018934"}


id: PBO:0016042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PTBP3","termid":"PBO:0016042"}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: GO:0018763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(ethylamino)-2-hydroxy-6-(isopropylamino)-1,3,5-triazine + H2O = N-isopropylammelide + ethylamine.","definition_xrefs":["EC:3.5.4.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"hydroxydechloroatrazine ethylaminohydrolase activity","secondary_identifiers":["UM-BBD_enzymeID:e0085","MetaCyc:R122-RXN","RHEA:23092"],"synonyms":[{"name":"4-(ethylamino)-2-hydroxy-6-(isopropylamino)-1,3,5-triazine ethylaminohydrolase activity","type":"related"},{"name":"AtzB","type":"related"},{"name":"hydroxyatrazine ethylaminohydrolase activity","type":"exact"},{"name":"hydroxyatrazine hydrolase activity","type":"related"}],"termid":"GO:0018763"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: GO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"},{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hypertrophy in response to stress","termid":"GO:0003299"}


id: PBO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(6)","termid":"PBO:0017093"}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: FYPO:0005006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation (obsolete FYPO:0005006)","synonyms":[{"name":"normal peptidyl-serine phosphorylation","type":"exact"}],"termid":"FYPO:0005006"}


id: FYPO:0006870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone methylation is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone methylation","termid":"FYPO:0006870"}


id: GO:2000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA export from nucleus","termid":"GO:0046833"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"positively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA export from nucleus","synonyms":[{"name":"positive regulation of tRNA export from cell nucleus","type":"exact"},{"name":"positive regulation of tRNA export out of nucleus","type":"exact"},{"name":"positive regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000240"}


id: GO:0016830
data:
  {"annotated_genes":["SJAG_02980","SJAG_02505","SJAG_00815","SJAG_02902","SJAG_04627","SJAG_01081","SJAG_03349","SJAG_04242","SJAG_03632","SJAG_02230","SJAG_00043","SJAG_03164","SJAG_04842","SJAG_04265","SJAG_00937","SJAG_01455","SJAG_02450","SJAG_03373","SJAG_03524","SJAG_03743","SJAG_02734","SJAG_04109","SJAG_00480","SJAG_01310","SJAG_02176","SJAG_00706","SJAG_03775","SJAG_02225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106359"},{"annotations":[103106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008686"},{"annotations":[102205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008696"},{"annotations":[110624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043727"},{"annotations":[109504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004014"},{"annotations":[103282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016832"},{"annotations":[99630,110774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004049"},{"annotations":[101063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004150"},{"annotations":[90583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004163"},{"annotations":[110715,96176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097023"},{"annotations":[101944,101943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004332"},{"annotations":[78540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004351"},{"annotations":[99631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033984"},{"annotations":[99632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004425"},{"annotations":[90341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"},{"annotations":[85075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004586"},{"annotations":[112834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004590"},{"annotations":[114580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008948"},{"annotations":[106549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016833"},{"annotations":[100463,90789,92555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004609"},{"annotations":[85555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004633"},{"annotations":[110627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004638"},{"annotations":[93411,84700,93412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004737"},{"annotations":[109954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102521"},{"annotations":[113088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004853"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00480":null,"SJAG_00706":null,"SJAG_00815":null,"SJAG_00937":null,"SJAG_01081":null,"SJAG_01310":null,"SJAG_01455":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02230":null,"SJAG_02450":null,"SJAG_02505":null,"SJAG_02734":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03164":null,"SJAG_03349":null,"SJAG_03373":null,"SJAG_03524":null,"SJAG_03632":null,"SJAG_03743":null,"SJAG_03775":null,"SJAG_04109":null,"SJAG_04242":null,"SJAG_04265":null,"SJAG_04627":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-carbon lyase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.-.-","Reactome:R-HSA-389611"],"synonyms":[{"name":"other carbon-carbon lyase activity","type":"narrow"}],"termid":"GO:0016830","terms_by_termid":{"GO:0004014":null,"GO:0004049":null,"GO:0004150":null,"GO:0004163":null,"GO:0004332":null,"GO:0004351":null,"GO:0004425":null,"GO:0004586":null,"GO:0004590":null,"GO:0004609":null,"GO:0004633":null,"GO:0004638":null,"GO:0004737":null,"GO:0004853":null,"GO:0008686":null,"GO:0008696":null,"GO:0008732":null,"GO:0008948":null,"GO:0016832":null,"GO:0016833":null,"GO:0033984":null,"GO:0043727":null,"GO:0097023":null,"GO:0102521":null,"GO:0106359":null}}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: GO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"glycogen (starch) synthase activity","secondary_identifiers":["Reactome:R-HSA-3322041","Reactome:R-HSA-3322001","Reactome:R-HSA-3322009","RHEA:18549","MetaCyc:RXN-7668","Reactome:R-HSA-3828061","Reactome:R-HSA-3858506"],"synonyms":[{"name":"UDP-glucose-glycogen glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glycogen synthase activity","type":"related"},{"name":"UDPG-glycogen synthetase activity","type":"related"},{"name":"UDPG-glycogen transglucosylase activity","type":"related"},{"name":"UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"glycogen (starch) synthetase activity","type":"exact"},{"name":"uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"related"}],"termid":"GO:0004373"}


id: PBO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7 (predicted)","termid":"PBO:0002653"}


id: GO:0035438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclic-di-GMP, cyclic dimeric guanosine monophosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-GMP binding","synonyms":[{"name":"3',5'-cyclic di-GMP binding","type":"exact"},{"name":"c-di-GMP binding","type":"exact"},{"name":"cyclic dinucleotide di-GMP binding","type":"exact"}],"termid":"GO:0035438"}


id: PBO:0048172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP1 pseudogene 1","termid":"PBO:0048172"}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: PBO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1","termid":"PBO:0018251"}


id: GO:0035828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rubidium ions (Rb+) by the kidney.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete renal rubidium ion transport (obsolete GO:0035828)","synonyms":[{"name":"renal Rb+ transport","type":"exact"},{"name":"renal rubidium cation transport","type":"exact"}],"termid":"GO:0035828"}


id: PBO:0059327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S2","termid":"PBO:0059327"}


id: PBO:0070370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 8","termid":"PBO:0070370"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: GO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylputrescine + H2O = acetate + putrescine.","definition_xrefs":["RHEA:23412","EC:3.5.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"acetylputrescine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLPUTRESCINE-DEACETYLASE-RXN","KEGG_REACTION:R01156"],"synonyms":[{"name":"N-acetylputrescine acetylhydrolase activity","type":"related"}],"termid":"GO:0047609"}


id: GO:0035458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-beta","termid":"GO:0035456"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-beta","synonyms":[{"name":"cellular response to beta-1 interferon","type":"related"},{"name":"cellular response to fiblaferon","type":"exact"},{"name":"cellular response to fibroblast interferon","type":"exact"}],"termid":"GO:0035458"}


id: FYECO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ K ions","synonyms":[{"name":"potassium ions added","type":"exact"}],"termid":"FYECO:0000031"}


id: PBO:0011093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome","termid":"PBO:0011093"}


id: PBO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/ORY-1 (pseudogene)","termid":"PBO:0051323"}


id: PBO:0041329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 83","termid":"PBO:0041329"}


id: GO:1990119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an RNA helicase.","definition_xrefs":["GOC:rb","PMID:23721653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"RNA helicase inhibitor activity","synonyms":[{"name":"ATP-dependent RNA helicase inhibitor activity","type":"exact"}],"termid":"GO:1990119"}


id: PBO:0058633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6765","termid":"PBO:0058633"}


id: GO:0033424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"CCG codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033424"}


id: PBO:0053561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 571","termid":"PBO:0053561"}


id: PBO:0053587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 612","termid":"PBO:0053587"}


id: GO:0052871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-tocopherol + O2 + NADPH + H+ = 13'-hydroxy-alpha-tocopherol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tocopherol omega-hydroxylase activity","termid":"GO:0052870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-tocopherol omega-hydroxylase activity","synonyms":[{"name":"alpha-tocopherol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052871"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["PMID:20935643","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: PBO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34 (predicted)","termid":"PBO:0000966"}


id: PBO:0038602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAP2 intronic transcript 1","termid":"PBO:0038602"}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: PBO:0041450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 putative open reading frame 163","termid":"PBO:0041450"}


id: GO:0033304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a metabolic process","synonyms":[{"name":"chlorophyll a metabolism","type":"exact"}],"termid":"GO:0033304"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: PBO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 9 Y-linked","termid":"PBO:0061819"}


id: RO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelopath_of","termid":"RO:0002555"}


id: GO:0015721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bile acid and bile salts into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:krc","PMID:14699511","PMID:12663868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"bile acid and bile salt transport","synonyms":[{"name":"bile acid transport","type":"narrow"},{"name":"bile salt transport","type":"narrow"}],"termid":"GO:0015721"}


id: PBO:0112266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assigned_by","termid":"PBO:0112266"}


id: PBO:0080775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 6","termid":"PBO:0080775"}


id: GO:0061629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II-specific DNA-binding transcription factor binding","secondary_identifiers":["GO:0001102","GO:0001085","GO:0001103"],"synonyms":[{"name":"RNA polymerase II activating transcription factor binding","type":"related"},{"name":"RNA polymerase II repressing transcription factor binding","type":"related"},{"name":"RNA polymerase II sequence-specific DNA binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II sequence-specific DNA-binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II transcription factor binding","type":"related"}],"termid":"GO:0061629"}


id: GO:0006786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["PubChem_Compound:122208","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme C biosynthetic process","synonyms":[{"name":"haem C biosynthesis","type":"exact"},{"name":"haem C biosynthetic process","type":"exact"},{"name":"heme C anabolism","type":"exact"},{"name":"heme C biosynthesis","type":"exact"},{"name":"heme C formation","type":"exact"},{"name":"heme C synthesis","type":"exact"}],"termid":"GO:0006786"}


id: SO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of genomic sequence known to undergo mutational events with greater frequency than expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutational_hotspot","synonyms":[{"name":"mutational hotspot","type":"exact"}],"termid":"SO:0002186"}


id: SO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_J_cluster","synonyms":[{"name":"V D J cluster","type":"exact"},{"name":"V-D-J-CLUSTER","type":"exact"}],"termid":"SO:0000532"}


id: PBO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mei2","termid":"PBO:0004753"}


id: GO:0098502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA dephosphorylation (obsolete GO:0098502)","termid":"GO:0098502"}


id: PBO:0042581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine dioxygenase type 1","termid":"PBO:0042581"}


id: PBO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 2","termid":"PBO:0046091"}


id: PBO:0064333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 3","termid":"PBO:0064333"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: PBO:0045473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 2","termid":"PBO:0045473"}


id: GO:0014747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tonic skeletal muscle contraction","termid":"GO:0014747"}


id: PR:O74942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidylprolyl isomerase domain and WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11071:SF40","OMA:SCHPO04259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.04","secondary_identifiers":["UniProtKB:O74942"],"synonyms":[{"name":"PPIase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPWD1","type":"exact"},{"name":"cyclophilin 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74942"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0053794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1048","termid":"PBO:0053794"}


id: PBO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1","termid":"PBO:0089714"}


id: PBO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_level","termid":"PBO:0028868"}


id: GO:0033771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + O2 + reduced [NADPH--hemoprotein reductase] = a 2-hydroxyflavanone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.162","RHEA:57584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavanone 2-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07198","MetaCyc:RXN-19645"],"synonyms":[{"name":"licodione synthase activity","type":"narrow"}],"termid":"GO:0033771"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: PBO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma binding protein","termid":"PBO:0047441"}


id: GO:0102237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,-6-trans-farnesol + ATP = 2-trans,-6-trans-farnesyl monophosphate + ADP + H+.","definition_xrefs":["GOC:pz","RHEA:61656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ATP:farnesol kinase activity","secondary_identifiers":["MetaCyc:RXN-12304"],"synonyms":[{"name":"ATP-dependent farnesol kinase activity","type":"related"}],"termid":"GO:0102237"}


id: GO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0003674","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"ligase inhibitor activity","termid":"GO:0055104"}


id: GO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-ornithine transmembrane export from vacuole","termid":"GO:0089706"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: PBO:0063354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen C-endopeptidase enhancer 2","termid":"PBO:0063354"}


id: GO:0060643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell of the mammary placode becomes a cell of the mammary gland bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland bud formation","termid":"GO:0060615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}


id: GO:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from secreted and periplasmic proteins precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase I activity (obsolete GO:0009004)","synonyms":[{"name":"Escherichia coli leader peptidase","type":"narrow"},{"name":"HOSP","type":"related"},{"name":"PuIO prepilin peptidase","type":"narrow"},{"name":"SPC","type":"related"},{"name":"SPase I activity","type":"related"},{"name":"bacterial leader peptidase 1","type":"related"},{"name":"bacterial leader peptidase I activity","type":"narrow"},{"name":"eukaryotic signal peptidase","type":"narrow"},{"name":"eukaryotic signal proteinase","type":"narrow"},{"name":"leader peptidase I","type":"related"},{"name":"leader peptidase activity","type":"related"},{"name":"leader peptide hydrolase activity","type":"related"},{"name":"leader proteinase activity","type":"related"},{"name":"phage-procoat-leader peptidase activity","type":"narrow"},{"name":"pilin leader peptidase","type":"narrow"},{"name":"prokaryotic leader peptidase","type":"narrow"},{"name":"prokaryotic signal peptidase","type":"narrow"},{"name":"prokaryotic signal proteinase","type":"narrow"},{"name":"propeptidase activity","type":"related"},{"name":"signal peptidase I activity","type":"exact"},{"name":"signal peptide hydrolase activity","type":"related"},{"name":"signal proteinase activity","type":"related"},{"name":"signalase activity","type":"related"}],"termid":"GO:0009004"}


id: PBO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrichrome synthetase Sib1","termid":"PBO:0000629"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: PBO:0044947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 2","termid":"PBO:0044947"}


id: GO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:14616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: GO:1900203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spread of virus in host, cell to cell (obsolete GO:1900203)","synonyms":[{"name":"activation of cell to cell spread of virus within host","type":"exact"},{"name":"activation of spread of virus in host, cell to cell","type":"narrow"},{"name":"activation of spread of virus within host, cell to cell","type":"exact"},{"name":"activation of viral spread within host, cell to cell","type":"exact"},{"name":"positive regulation of cell to cell spread of virus within host","type":"exact"},{"name":"positive regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"positive regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"positive regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up regulation of viral spread within host, cell to cell","type":"exact"},{"name":"up-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"up-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"up-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"up-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"upregulation of cell to cell spread of virus within host","type":"exact"},{"name":"upregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"upregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"upregulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900203"}


id: PATO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant","synonyms":[{"name":"variable","type":"exact"}],"termid":"PATO:0001227"}


id: PBO:0041121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD3 antisense RNA 1","termid":"PBO:0041121"}


id: GO:0098579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sex chromosome that has not been inactivated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"active sex chromosome","termid":"GO:0098579"}


id: GO:0031629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a synaptic vesicle with the presynaptic active zone membrane, thereby releasing its cargo neurotransmitters into the synaptic cleft.","definition_xrefs":["GOC:aruk","PMID:18618940","ISBN:0071120009","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"},{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"synaptic vesicle fusion","type":"broad"},{"name":"synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031629"}


id: GO:1903589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23388056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell proliferation","termid":"GO:0001938"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"activation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"activation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"positive regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"upregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"upregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"}],"termid":"GO:1903589"}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: PBO:0085595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the proximal pole; BUD8 has a paralog, BUD9, that arose from the whole genome duplication","termid":"PBO:0085595"}


id: PBO:0056874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence D (pseudogene)","termid":"PBO:0056874"}


id: GO:0016730
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[105824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.18.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on iron-sulphur proteins as donors","type":"exact"}],"termid":"GO:0016730","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: PBO:0026654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_mitotic_actomyosin_contractile_ring_localization","termid":"PBO:0026654"}


id: PBO:0055438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2869","termid":"PBO:0055438"}


id: PBO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 14, pseudogene","termid":"PBO:0044128"}


id: PBO:0068357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 2","termid":"PBO:0068357"}


id: GO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory system development","termid":"GO:0048880"}


id: GO:1901334
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone metabolism","type":"exact"}],"termid":"GO:1901334","terms_by_termid":{"GO:0070485":null}}


id: PBO:0030622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha-glucosidase_activity","termid":"PBO:0030622"}


id: PBO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VI","termid":"PBO:0060340"}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: PR:Q9UTC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00203","PRO:DNx","PANTHER:PTHR19846:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C227.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.12","secondary_identifiers":["UniProtKB:Q9UTC7"],"synonyms":[{"name":"Spom972h-PRPF4","type":"exact"}],"termid":"PR:Q9UTC7"}


id: GO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.","definition_xrefs":["GOC:curators","PMID:8606779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"kinesin binding","termid":"GO:0019894"}


id: PATO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000400 morphology value (obsolete PATO:0000400)","termid":"PATO:0000400"}


id: PBO:0108944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 1","termid":"PBO:0108944"}


id: GO:0018376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-asparagine to form peptidyl-L-erythro-beta-hydroxyasparagine; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).","definition_xrefs":["RESID:AA0026"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine hydroxylation to form L-erythro-beta-hydroxyasparagine (obsolete GO:0018376)","termid":"GO:0018376"}


id: SO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a Y RNA.","definition_xrefs":["PMID:6816230","PMID:7520568","PMID:7539809","PMID:8836182","PMID:6187471","PMID:1698620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_gene","termid":"SO:0002359"}


id: PBO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 1B","termid":"PBO:0060898"}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_00987","SJAG_04009","SJAG_02730","SJAG_00792","SJAG_04813","SJAG_00124","SJAG_03473","SJAG_04584","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89434,102376,79320,90860,90209,104940,112192,100569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[92530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001141","GO:0001220","GO:0001218","GO:0001219"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: PBO:0078960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-3","termid":"PBO:0078960"}


id: FYPO:0006631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin","synonyms":[{"name":"decreased protein localisation to chromatin","type":"exact"},{"name":"reduced protein localization to chromatin","type":"exact"}],"termid":"FYPO:0006631"}


id: PBO:0087339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific translational activator for the COX1 mRNA; binds to the COX1 mRNA; also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains 12 pentatricopeptide repeats (PPRs)","termid":"PBO:0087339"}


id: PBO:0091001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit","termid":"PBO:0091001"}


id: PBO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med18","termid":"PBO:0017595"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: PBO:0041985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC28A antisense RNA 1","termid":"PBO:0041985"}


id: GO:0031489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"myosin V binding","termid":"GO:0031489"}


id: PBO:0042553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 16","termid":"PBO:0042553"}


id: PBO:0110472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX16 pseudogene 1","termid":"PBO:0110472"}


id: GO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hormone-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to hormone","type":"related"},{"name":"induction of apoptosis by hormones","type":"related"}],"termid":"GO:0008628"}


id: GO:0008791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + L-arginine = CoA + N2-succinyl-L-arginine.","definition_xrefs":["EC:2.3.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"arginine N-succinyltransferase activity","secondary_identifiers":["RHEA:15185","MetaCyc:ARGININE-N-SUCCINYLTRANSFERASE-RXN"],"synonyms":[{"name":"AOST activity","type":"related"},{"name":"AST activity","type":"related"},{"name":"AstA","type":"related"},{"name":"arginine and ornithine N(2)-succinyltransferase activity","type":"related"},{"name":"arginine and ornithine N2-succinyltransferase activity","type":"related"},{"name":"arginine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine 2-N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine N2-succinyltransferase activity","type":"related"}],"termid":"GO:0008791"}


id: PBO:0048842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase pseudogene","termid":"PBO:0048842"}


id: PBO:0064329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastin 3","termid":"PBO:0064329"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: GO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate.","definition_xrefs":["PMID:9153262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"heparan sulfate 2-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076508"],"synonyms":[{"name":"heparan-sulfate 2-O-sulphotransferase activity","type":"exact"},{"name":"heparin 2-sulfotransferase activity","type":"related"},{"name":"heparin-sulphate 2-sulphotransferase activity","type":"related"}],"termid":"GO:0004394"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: FYPO:0004776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular threonine level","termid":"FYPO:0001565"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar threonine level","synonyms":[{"name":"increased level of threonine in vacuole","type":"exact"},{"name":"increased vacuolar L-threonine level","type":"exact"},{"name":"increased vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004776"}


id: GO:0003300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy","termid":"GO:0003300"}


id: PBO:0043458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNNM3 divergent transcript","termid":"PBO:0043458"}


id: PR:P87310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03848","PRO:DNx","PANTHER:PTHR13345:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.09c","secondary_identifiers":["UniProtKB:P87310"],"synonyms":[{"name":"Spom972h-MED10","type":"exact"},{"name":"mediator complex subunit 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87310"}


id: GO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism out of a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:rs","PMID:19325115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from host cell","secondary_identifiers":["GO:0035890"],"synonyms":[{"name":"ejection from host","type":"related"},{"name":"ejection from host cell","type":"related"},{"name":"exit from host","type":"related"},{"name":"host cell exit","type":"exact"}],"termid":"GO:0035891"}


id: GO:1905610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:bc","GO_REF:0000059","GOC:PARL","PMID:23409027","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA cap binding","termid":"GO:1905610"}


id: PBO:0038895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRA1 antisense RNA 1","termid":"PBO:0038895"}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: PBO:0080809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 5","termid":"PBO:0080809"}


id: GO:0033574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to testosterone","synonyms":[{"name":"response to testosterone stimulus","type":"exact"}],"termid":"GO:0033574"}


id: PBO:0039161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6","termid":"PBO:0039161"}


id: GO:0106172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPI-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:29535154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"COPI-coated vesicle lumen","termid":"GO:0106172"}


id: PBO:0076735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like","termid":"PBO:0076735"}


id: PR:O42915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin fusion degradation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12555:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.09c","secondary_identifiers":["UniProtKB:O42915"],"synonyms":[{"name":"SPBC16A3.09c","type":"related"},{"name":"Spom972h-UFD1L","type":"exact"},{"name":"UB fusion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42915"}


id: FYPO:0007466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation","synonyms":[{"name":"abnormal histone H3 K9 methylation","type":"exact"},{"name":"abnormal histone H3K9me","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation","type":"exact"}],"termid":"FYPO:0007466"}


id: GO:0061004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the kidney to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"},{"relation_name":"part_of","term_name":"renal system pattern specification","termid":"GO:0072048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in kidney development","synonyms":[{"name":"kidney pattern formation","type":"related"},{"name":"kidney pattern specification","type":"exact"},{"name":"pattern formation involved in kidney development","type":"related"}],"termid":"GO:0061004"}


id: FYPO:0006922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of a sliding clamp such as PCNA from DNA during replication is abnormal.","definition_xrefs":["PomBase:mah","GO:0090618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA clamp unloading","synonyms":[{"name":"abnormal DNA clamp unloading during mitotic cell cycle","type":"related"},{"name":"abnormal DNA clamp unloading during vegetative growth","type":"exact"},{"name":"abnormal PCNA unloading","type":"related"}],"termid":"FYPO:0006922"}


id: PBO:0075707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP2 antisense RNA 1","termid":"PBO:0075707"}


id: PBO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 3","termid":"PBO:0045481"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: PR:O74804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- est1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere elongation protein est1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.13","synonyms":[{"name":"Spom972h-est1","type":"exact"},{"name":"ever shorter telomeres protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74804"}


id: FYPO:0000371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification does not occur. All RNA modification may be abolished, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished RNA modification","synonyms":[{"name":"RNA modification abolished","type":"exact"},{"name":"RNA modification abolished during vegetative growth","type":"exact"},{"name":"RNA modification: absent","type":"related"},{"name":"abolished RNA modification during mitotic cell cycle","type":"related"},{"name":"absent RNA modification","type":"exact"}],"termid":"FYPO:0000371"}


id: PBO:0004183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 guanyl-nucleotide exchange factor Efc25","termid":"PBO:0004183"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0038023","GO:0016740","GO:0140096","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: PBO:0084399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lumazine synthase (DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin; DMRL synthase stands for 6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0084399"}


id: FYPO:0001153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular methylamine level","synonyms":[{"name":"normal cellular methylamine accumulation","type":"related"},{"name":"normal cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methylamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001153"}


id: PBO:0056427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 2","termid":"PBO:0056427"}


id: PBO:0038828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 1","termid":"PBO:0038828"}


id: PBO:0073091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C","termid":"PBO:0073091"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: PBO:0079252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 23 like","termid":"PBO:0079252"}


id: PBO:0045088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase pseudogene 1","termid":"PBO:0045088"}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: PBO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 2","termid":"PBO:0043923"}


id: PBO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2B","termid":"PBO:0043027"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex alpha subunit Alp3","termid":"PBO:0034757"}


id: PBO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036063"}


id: PBO:0045048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLC1 Rho GTPase activating protein","termid":"PBO:0045048"}


id: PBO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_translation_phenotype","termid":"PBO:0031586"}


id: PBO:0027590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027590"}


id: GO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which nuclear pore complexes reform during mitotic cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore complex assembly","termid":"GO:0051292"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear pore complex reassembly","termid":"GO:0007087"}


id: MOD:00549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:15283597","Unimod:196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA d3","synonyms":[{"name":"(3-acrylamidopropyl)trimethylammonium","type":"related"},{"name":"APTA d3","type":"related"},{"name":"QAT:2H(3)","type":"related"}],"termid":"MOD:00549"}


id: PBO:0040416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 1","termid":"PBO:0040416"}


id: GO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088"}


id: PBO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase(predicted)","termid":"PBO:0004277"}


id: GO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN","RHEA:14817","GO:0018841","Reactome:R-HSA-71173","UM-BBD_reactionID:r0106"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: GO:1904430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of t-circle formation.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of t-circle formation","termid":"GO:1904429"},{"relation_name":"negatively_regulates","term_name":"t-circle formation","termid":"GO:0090656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0044085","GO:0032200"],"is_obsolete":false,"name":"negative regulation of t-circle formation","synonyms":[{"name":"down regulation of t-circle formation","type":"exact"},{"name":"down regulation of telomeric circle formation","type":"exact"},{"name":"down-regulation of t-circle formation","type":"exact"},{"name":"down-regulation of telomeric circle formation","type":"exact"},{"name":"downregulation of t-circle formation","type":"exact"},{"name":"downregulation of telomeric circle formation","type":"exact"},{"name":"inhibition of t-circle formation","type":"narrow"},{"name":"inhibition of telomeric circle formation","type":"narrow"},{"name":"negative regulation of telomeric circle formation","type":"exact"}],"termid":"GO:1904430"}


id: PR:Q09834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.08","secondary_identifiers":["UniProtKB:Q09834"],"synonyms":[{"name":"Spom972h-SLC25A44","type":"exact"}],"termid":"PR:Q09834"}


id: GO:0033904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,6-alpha-D-glucosidic linkages in dextran.","definition_xrefs":["EC:3.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"dextranase activity","secondary_identifiers":["MetaCyc:3.2.1.11-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan 6-glucanohydrolase activity","type":"related"},{"name":"DL 2","type":"related"},{"name":"alpha-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"alpha-D-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"dextran hydrolase activity","type":"related"},{"name":"dextranase DL 2 activity","type":"narrow"},{"name":"endo-dextranase activity","type":"related"},{"name":"endodextranase activity","type":"related"}],"termid":"GO:0033904"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: PBO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck1","termid":"PBO:0001517"}


id: PR:000037299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe serine/threonine-protein kinase cds1 primed by rad3-rad26 complex.","definition_xrefs":["PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos(T11) dimer","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"cds1/Phos(T11) dimer","type":"exact"}],"termid":"PR:000037299"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: PR:Q10259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal peptidase complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12804:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal signal peptidase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.11","secondary_identifiers":["UniProtKB:Q10259"],"synonyms":[{"name":"SPAC56F8.11","type":"related"},{"name":"Spom972h-SPCS3","type":"exact"}],"termid":"PR:Q10259"}


id: FYPO:0002513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased protein palmitoylation during meiosis","synonyms":[{"name":"increased protein palmitoylation during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002513"}


id: PBO:0040171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 2","termid":"PBO:0040171"}


id: GO:0021833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of a cell and the extracellular matrix involved in the directed tangential movement of cells mediated by cell-cell interactions in the developing cerebral cortex.","definition_xrefs":["PMID:12626695","GOC:ascb_2009","GOC:dph","GOC:cls","GO_REF:0000021","GOC:tb","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in tangential migration using cell-cell interactions","termid":"GO:0021833"}


id: PBO:0041833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 9","termid":"PBO:0041833"}


id: GO:0070507
data:
  {"annotated_genes":["SJAG_02045","SJAG_02332","SJAG_00244","SJAG_04312","SJAG_00845","SJAG_00514","SJAG_01821","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99835,111163,111428],"is_not":false,"summary":null,"term":"GO:0070507"},{"annotations":[97976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[107560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[87535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[107145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[86044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton organisation","type":"exact"},{"name":"regulation of microtubule dynamics","type":"exact"}],"termid":"GO:0070507","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PBO:0057084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181c","termid":"PBO:0057084"}


id: PBO:0058840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8070","termid":"PBO:0058840"}


id: PBO:0067945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 247","termid":"PBO:0067945"}


id: FYPO:0001820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lithium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on lithium","synonyms":[{"name":"normal cell population growth in presence of lithium ions","type":"exact"},{"name":"normal cell population growth on lithium","type":"exact"},{"name":"normal cell population growth on lithium ion","type":"exact"},{"name":"normal cellular response to lithium ion","type":"related"},{"name":"normal growth on lithium ion","type":"exact"},{"name":"normal vegetative cell population growth on lithium ion","type":"exact"}],"termid":"FYPO:0001820"}


id: PATO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000179 body position (obsolete PATO:0000179)","termid":"PATO:0000179"}


id: PBO:0052018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD7-PLA2G4B readthrough","termid":"PBO:0052018"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: PBO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein BiP","termid":"PBO:0000823"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: PBO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-12","termid":"PBO:0051279"}


id: PBO:0108900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 13","termid":"PBO:0108900"}


id: GO:0098533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex that functions in ATPase dependent active transport across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase dependent transmembrane transport complex","termid":"GO:0098533"}


id: FYPO:0002755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"decreased cysteine synthase activity","synonyms":[{"name":"reduced cysteine synthase activity","type":"exact"}],"termid":"FYPO:0002755"}


id: GO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in).","definition_xrefs":["TC:2.A.22.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter:sodium symporter activity","synonyms":[{"name":"sodium/neurotransmitter symporter activity","type":"exact"}],"termid":"GO:0005328"}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PomBase:mah","PMID:31601154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: GO:0006432
data:
  {"annotated_genes":["SJAG_03626","SJAG_02206","SJAG_02615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89768,93351,114113],"is_not":false,"summary":null,"term":"GO:0006432"}]},"cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. The phenylalanyl-tRNA synthetase is a class-II synthetase. However, unlike other class II enzymes, The activated amino acid is transferred to the 2'-OH group of a phenylalanine-accepting tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_02615":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"phenylalanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006432","terms_by_termid":{"GO:0006432":null}}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: GO:0015151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alpha-glucosides from one side of a membrane to the other. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"}


id: PBO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal haemoglobinuri","termid":"PBO:0003559"}


id: GO:0160159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-acetylmuramic acid catabolic process.","definition_xrefs":["PMID:18723630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"N-acetylmuramic acid catabolic process","termid":"GO:0097173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of N-acetylmuramic acid catabolic process","termid":"GO:0160159"}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PomBase:MAH","PMID:11242054","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: PBO:0028627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_mitotic_interphase","termid":"PBO:0028627"}


id: PBO:0070096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 10 pseudogene","termid":"PBO:0070096"}


id: PBO:0034203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by_part_of","termid":"PBO:0034203"}


id: GO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity via signaling pathways and mediated by adaptor proteins.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1, type I, activating receptor activity","secondary_identifiers":["GO:0019967"],"synonyms":[{"name":"IL-1 type I, activating binding","type":"exact"},{"name":"IL-1 type I, activating receptor","type":"exact"},{"name":"interleukin-1 activating receptor activity","type":"exact"},{"name":"interleukin-1 type I receptor activity","type":"exact"},{"name":"interleukin-1, type I, activating binding","type":"related"}],"termid":"GO:0004909"}


id: PBO:0074049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 30","termid":"PBO:0074049"}


id: PBO:0071372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 31","termid":"PBO:0071372"}


id: PBO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 40","termid":"PBO:0045850"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: PBO:0083470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRR1","termid":"PBO:0083470"}


id: PBO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2 (predicted)","termid":"PBO:0005854"}


id: GO:1903147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["PMID:24600391","GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"negatively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248","GO:0007005"],"is_obsolete":false,"name":"negative regulation of autophagy of mitochondrion","synonyms":[{"name":"down regulation of mitochondrial degradation","type":"broad"},{"name":"down regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitophagy","type":"broad"},{"name":"downregulation of mitochondrion degradation","type":"broad"},{"name":"inhibition of mitochondrion degradation","type":"related"},{"name":"inhibition of mitophagy","type":"narrow"}],"termid":"GO:1903147"}


id: PBO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: PBO:0063242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 7","termid":"PBO:0063242"}


id: PBO:0049451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 5","termid":"PBO:0049451"}


id: PBO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_nitrogen_starvation","termid":"PBO:0030080"}


id: PBO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Phx1","termid":"PBO:0004538"}


id: GO:1905756
data:
  {"annotated_genes":["SJAG_04597","SJAG_03048","SJAG_04666","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[88564,83732,90551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905756","terms_by_termid":{"GO:1905757":null,"GO:1905758":null}}


id: PR:O14301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00809","PANTHER:PTHR19856:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C9G1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.05","secondary_identifiers":["UniProtKB:O14301"],"synonyms":[{"name":"Spom972h-WDR1","type":"exact"}],"termid":"PR:O14301"}


id: PBO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit alpha","termid":"PBO:0042299"}


id: PR:Q9P7W2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-formyltetrahydrofolate cyclo-ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23407:SF1","OMA:SCHPO03479","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.08c","secondary_identifiers":["UniProtKB:Q9P7W2"],"synonyms":[{"name":"5,10-methenyl-tetrahydrofolate synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTHFS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTHFS","type":"exact"},{"name":"methenyl-THF synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W2"}


id: PBO:0062330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 69 pseudogene","termid":"PBO:0062330"}


id: PBO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 6","termid":"PBO:0060105"}


id: GO:0071755
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgM immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","PMID:20176268","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgM immunoglobulin complex","termid":"GO:0071753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgM B cell receptor complex","synonyms":[{"name":"membrane-bound IgM","type":"narrow"},{"name":"surface IgM","type":"narrow"}],"termid":"GO:0071755"}


id: GO:1902667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon guidance.","definition_xrefs":["GOC:hjd","GOC:TermGenie","GO_REF:0000058","PMID:23006775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon guidance","synonyms":[{"name":"regulation of axon chemotaxis","type":"related"},{"name":"regulation of axon growth cone guidance","type":"narrow"},{"name":"regulation of axon pathfinding","type":"exact"}],"termid":"GO:1902667"}


id: GO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-vacuole transport vesicle (obsolete GO:0005809)","synonyms":[{"name":"Golgi-vacuole transport vesicle","type":"exact"}],"termid":"GO:0005809"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: SO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5_8S_rRNA (5.8S rRNA), which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5_8S_gene","synonyms":[{"name":"5.8S rRNA gene","type":"exact"},{"name":"5_8S rRNA gene","type":"exact"},{"name":"5_8S_rRNA_gene","type":"exact"}],"termid":"SO:0002240"}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: GO:1904035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:19137015","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell apoptotic process","synonyms":[{"name":"regulation of epithelial cell apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"regulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904035"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 2","termid":"PBO:0052215"}


id: PBO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Tu Tuf1","termid":"PBO:0003784"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PMID:26108447","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: GO:0016888
data:
  {"annotated_genes":["SJAG_01173","SJAG_05237","SJAG_01648","SJAG_04183","SJAG_03994","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93269,84589,103894,99333,100289,97295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016893"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788","GO:0140097"],"is_obsolete":false,"name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-912368","EC:3.1.21.-"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016888","terms_by_termid":{"GO:0017108":null}}


id: PBO:0085340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in the cytoplasm-to-vacuole targeting (CVT) pathway, autophagy, micronucleophagy and mitophagy; binds to several phosphoinositides including: PtdIns(3,5)P2, PI3P and PI4P; involved in PI3P-dependent recruitment and organization of both the Atg12-Atg5-Atg16 complex and Atg8p at the pre-autophagosomal structure; necessary for oxidant-induced cell death; WD-40 repeat containing PROPPIN family member","termid":"PBO:0085340"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: FYPO:0004307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during metaphase.","definition_xrefs":["PomBase:mah","PMID:10398680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0000120","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"long mitotic spindle during metaphase","synonyms":[{"name":"elongated mitotic spindle during metaphase","type":"exact"},{"name":"increased mitotic spindle length during metaphase","type":"exact"},{"name":"long bipolar mitotic spindle during metaphase","type":"exact"},{"name":"long mitotic spindle during metaphase during vegetative growth","type":"exact"},{"name":"long mitotic spindles during metaphase","type":"exact"},{"name":"long spindle during metaphase of mitosis","type":"exact"},{"name":"long spindle during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004307"}


id: PBO:0064692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 28","termid":"PBO:0064692"}


id: MOD:01778
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal glycine residue to N-(glycyl)-L-cysteine by forming a peptide bond with a free L-cysteine.","definition_xrefs":["PubMed:18799456","PubMed:18771296","PubMed:18842002","RESID:AA0529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(glycyl)-L-cysteine","synonyms":[{"name":"(2R)-2-[(aminoacetyl)amino]-3-sulfanylpropanoic acid","type":"exact"},{"name":"MOD_RES CysO-cysteine adduct","type":"exact"},{"name":"N-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"N-(glycyl)-L-cysteine","type":"exact"}],"termid":"MOD:01778"}


id: PBO:0079732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 9 (pseudogene)","termid":"PBO:0079732"}


id: PBO:0076184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase modifying factor 2","termid":"PBO:0076184"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: PBO:0049139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 3","termid":"PBO:0049139"}


id: SO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_dimethylguanosine","secondary_identifiers":["RNAMOD:090"],"synonyms":[{"name":"N2 7 dimethylguanosine","type":"exact"},{"name":"N2,7-dimethylguanosine","type":"exact"},{"name":"m2,7G","type":"exact"}],"termid":"SO:0001338"}


id: PR:Q9Y7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.11 gene.","definition_xrefs":["UniProtKB:Q9Y7X7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C365.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.11","synonyms":[{"name":"Spom972h-SPBC365.11","type":"exact"}],"termid":"PR:Q9Y7X7"}


id: PBO:0029145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029145"}


id: PR:Q9Y7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C365.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.16","synonyms":[{"name":"Spom972h-SPBC365.16","type":"exact"}],"termid":"PR:Q9Y7X4"}


id: PR:Q9Y7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.03","synonyms":[{"name":"Spom972h-SPBC2A9.03","type":"exact"}],"termid":"PR:Q9Y7K5"}


id: PBO:0088133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; member of the multidrug resistance family; YCR023C is not an essential gene","termid":"PBO:0088133"}


id: PBO:0043929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein pseudogene 1","termid":"PBO:0043929"}


id: PBO:0052717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 9","termid":"PBO:0052717"}


id: GO:0034972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 26 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 methylation (obsolete GO:0034972)","synonyms":[{"name":"histone H3 R26 methylation","type":"exact"},{"name":"histone H3R26me","type":"exact"},{"name":"histone lysine H3 R26 methylation","type":"exact"}],"termid":"GO:0034972"}


id: PBO:0082071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0082071"}


id: GO:1902440
data:
  {"annotated_genes":["SJAG_04455","SJAG_00229","SJAG_03437","SJAG_01224","SJAG_00883","SJAG_04468","SJAG_00082","SJAG_05319","SJAG_01211","SJAG_01546","SJAG_02514","SJAG_01775","SJAG_03508","SJAG_01371","SJAG_02731","SJAG_05266","SJAG_06270","SJAG_05220","SJAG_01790","SJAG_03376","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86175],"is_not":false,"summary":null,"term":"GO:1902440"},{"annotations":[91783,97395,103673,106305,89600,101154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061509"},{"annotations":[103362],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902543"},{"annotations":[113024,87140,96642,85320,105018,85919,110219,103635,92915,94762,106027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[97067,102504],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902542"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle pole body.","definition_xrefs":["PMID:22438582","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_02731":null,"SJAG_03376":null,"SJAG_03437":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990975"],"synonyms":[{"name":"establishment of protein localization to mitotic spindle pole body","type":"narrow"},{"name":"protein localisation in mitotic spindle pole body","type":"exact"},{"name":"protein localisation to mitotic spindle pole body","type":"exact"},{"name":"protein localization in mitotic spindle pole body","type":"exact"}],"termid":"GO:1902440","terms_by_termid":{"GO:0061509":null,"GO:1902440":null,"GO:1902542":null,"GO:1902543":null,"GO:1990976":null}}


id: PBO:0069363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 623, pseudogene","termid":"PBO:0069363"}


id: GO:0070127
data:
  {"annotated_genes":["SJAG_02977","SJAG_00653","SJAG_02428","SJAG_04840","SJAG_01797","SJAG_04094","SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[93149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[90800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[93434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"}]},"cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00653":null,"SJAG_01352":null,"SJAG_01797":null,"SJAG_02428":null,"SJAG_02977":null,"SJAG_04094":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation for mitochondrial protein translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070127","terms_by_termid":{"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null}}


id: PBO:0062730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 4","termid":"PBO:0062730"}


id: GO:0008617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine metabolic process","synonyms":[{"name":"guanosine metabolism","type":"exact"}],"termid":"GO:0008617"}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: PBO:0041367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 45","termid":"PBO:0041367"}


id: PBO:0081746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 676","termid":"PBO:0081746"}


id: PBO:0090002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13","termid":"PBO:0090002"}


id: PATO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000055 relative number (obsolete PATO:0000055)","termid":"PATO:0000055"}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: PBO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031652"}


id: GO:1904672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"}


id: PBO:0086706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mCherry fusion protein localizes to the cytosol and nucleus","termid":"PBO:0086706"}


id: PBO:0081431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285","termid":"PBO:0081431"}


id: GO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host autophagy","synonyms":[{"name":"autophagy during symbiotic interaction","type":"related"},{"name":"autophagy involved in symbiotic interaction","type":"related"},{"name":"modulation by symbiont of host autophagic process","type":"related"},{"name":"modulation by symbiont of host autophagy","type":"exact"},{"name":"symbiont-mediated modulation of host autophagy","type":"exact"}],"termid":"GO:0075071"}


id: PBO:0076888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 41","termid":"PBO:0076888"}


id: PBO:0056363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK6 divergent transcript","termid":"PBO:0056363"}


id: PBO:0069369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 629, pseudogene","termid":"PBO:0069369"}


id: PBO:0082227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, ubiquitin ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters; substrate of Rsp5p-mediated Lys63-polyubiquitination and Ubp2-mediated deubiquitination; promoter contains several Gcn4p binding sites required for induction in response to starvation via Gcn4p and the general amino acid control pathway; ECM21 has a paralog, CSR2, that arose from the whole genome duplication","termid":"PBO:0082227"}


id: PBO:0069075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 322, pseudogene","termid":"PBO:0069075"}


id: PR:Q9UUK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylglycinamide formyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.08c","secondary_identifiers":["UniProtKB:Q9UUK7"],"synonyms":[{"name":"5'-phosphoribosylglycinamide transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GAR transformylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GART (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-purN","type":"exact"}],"termid":"PR:Q9UUK7"}


id: SO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Conserved_region"],"synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:conserved_region","type":"exact"},{"name":"conserved region","type":"exact"}],"termid":"SO:0000330"}


id: PBO:0092019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan (cca), mitochondrial","termid":"PBO:0092019"}


id: PBO:0059338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S9","termid":"PBO:0059338"}


id: PBO:0072819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD12 antisense RNA 1","termid":"PBO:0072819"}


id: GO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085","GO:0006810","GO:0140056","GO:0016192"],"is_obsolete":false,"name":"phagosome-lysosome docking","synonyms":[{"name":"lysosome recruitment to phagosome","type":"exact"}],"termid":"GO:0090384"}


id: PBO:0079899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCR10 pseudogene 1","termid":"PBO:0079899"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: PBO:0110805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1, glucose sensing","termid":"PBO:0110805"}


id: PBO:0003525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor Pex5","termid":"PBO:0003525"}


id: FYPO:0001511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, cell shape is altered, and cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001121"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001312","FYPO:0000257","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable lumpy cell","type":"related"},{"name":"inviable vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0001511"}


id: FYPO:0000725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to methyl methanesulfonate","synonyms":[{"name":"resistance to MMS","type":"exact"},{"name":"resistance to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to methyl methanesulphonate","type":"exact"},{"name":"resistant to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0000725"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: PBO:0027996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_G2_phase","termid":"PBO:0027996"}


id: GO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIb hypersensitivity","synonyms":[{"name":"down regulation of type IIb hypersensitivity","type":"exact"},{"name":"down-regulation of type IIb hypersensitivity","type":"exact"},{"name":"downregulation of type IIb hypersensitivity","type":"exact"},{"name":"inhibition of type IIb hypersensitivity","type":"narrow"}],"termid":"GO:0001800"}


id: GO:0018873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide.","definition_xrefs":["UM-BBD_pathwayID:atr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine metabolic process","synonyms":[{"name":"atrazine metabolism","type":"exact"}],"termid":"GO:0018873"}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: GO:0005457
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89476],"is_not":false,"summary":null,"term":"GO:0005457"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a GDP-fucose from one side of a membrane to the other. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transporter activity","termid":"GO:0036080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"GDP-fucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-742345","Reactome:R-HSA-5653596"],"termid":"GO:0005457","terms_by_termid":{"GO:0005457":null}}


id: PBO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA/DNA_annealing_activity","termid":"PBO:0034691"}


id: PBO:0030058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_minichromosome_loss","termid":"PBO:0030058"}


id: PBO:0059121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 like","termid":"PBO:0059121"}


id: PBO:0015693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Dis2","termid":"PBO:0015693"}


id: PATO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased intensity","synonyms":[{"name":"low intensity","type":"exact"}],"termid":"PATO:0001783"}


id: GO:0072756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"response to paraquat","termid":"GO:1901562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to paraquat","termid":"GO:0072756"}


id: PBO:0108549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoside hydrolase family protein Gls1","termid":"PBO:0108549"}


id: PBO:0090749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-like containing protein, implicated in vesicle formation/trafficking","termid":"PBO:0090749"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: MOD:00649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylated residue","synonyms":[{"name":"AcylRes","type":"exact"}],"termid":"MOD:00649"}


id: PBO:0065832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7B, member RAS oncogene family","termid":"PBO:0065832"}


id: PBO:0072438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 2","termid":"PBO:0072438"}


id: GO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of BMP signaling pathway","secondary_identifiers":["GO:0090099"],"synonyms":[{"name":"down regulation of BMP signaling pathway","type":"exact"},{"name":"down-regulation of BMP signaling pathway","type":"exact"},{"name":"downregulation of BMP signaling pathway","type":"exact"},{"name":"inhibition of BMP signaling pathway","type":"narrow"},{"name":"negative regulation of BMP receptor signaling pathway","type":"related"},{"name":"negative regulation of BMP signalling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"negative regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030514"}


id: GO:0070647
data:
  {"annotated_genes":["SJAG_02082","SJAG_04948","SJAG_03950","SJAG_00878","SJAG_02764","SJAG_00615","SJAG_00795","SJAG_00776","SJAG_05977","SJAG_00033","SJAG_03733","SJAG_03325","SJAG_04011","SJAG_00720","SJAG_03843","SJAG_02503","SJAG_01985","SJAG_00727","SJAG_00604","SJAG_01776","SJAG_01018","SJAG_02341","SJAG_05032","SJAG_01302","SJAG_03896","SJAG_03616","SJAG_05297","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57416],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033234"},{"annotations":[105128,91434,89139,102612,106466,97436,87600,89024,85809,101411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[98999,92625,108446,85424,90736,114463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[105693,110760,92340,85766,93897,100598,85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[101976,104540,92131,113288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00720":null,"SJAG_00727":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_01985":null,"SJAG_02082":null,"SJAG_02341":null,"SJAG_02503":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03616":null,"SJAG_03733":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05032":null,"SJAG_05297":null,"SJAG_05977":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0070647","terms_by_termid":{"GO:0000338":null,"GO:0016925":null,"GO:0032447":null,"GO:0033234":null,"GO:0045116":null}}


id: PBO:0068434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 4","termid":"PBO:0068434"}


id: GO:0042052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere development","synonyms":[{"name":"rhabdomere organization","type":"exact"}],"termid":"GO:0042052"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: PATO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluid flow that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluid flow rate","termid":"PATO:0002243"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fluid flow","synonyms":[{"name":"high flow","type":"exact"}],"termid":"PATO:0001839"}


id: GO:1901548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle lumen acidification","termid":"GO:1901546"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"activation of synaptic vesicle lumen acidification","type":"narrow"},{"name":"activation of synaptic vesicle lumen pH reduction","type":"narrow"},{"name":"positive regulation of proton loading","type":"exact"},{"name":"positive regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"up regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"up regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"up-regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"up-regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"upregulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"upregulation of synaptic vesicle lumen pH reduction","type":"exact"}],"termid":"GO:1901548"}


id: PBO:0063313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 7 pseudogene","termid":"PBO:0063313"}


id: GO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host defense response (obsolete GO:0044416)","synonyms":[{"name":"activation by symbiont of host defense response","type":"exact"},{"name":"activation of host defense response","type":"exact"},{"name":"induction by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host defense response","type":"related"},{"name":"stimulation by symbiont of host defense response","type":"related"},{"name":"up regulation by symbiont of host defense response","type":"related"},{"name":"up-regulation by symbiont of host defense response","type":"related"},{"name":"upregulation by symbiont of host defense response","type":"related"}],"termid":"GO:0044416"}


id: FYPO:0007797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased glucan 1,3-alpha-glucosidase activity","synonyms":[{"name":"reduced glucan 1,3-alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0007797"}


id: PBO:0075558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm equatorial segment protein 1","termid":"PBO:0075558"}


id: GO:0032655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-12 production","secondary_identifiers":["GO:0045075","GO:2001182"],"synonyms":[{"name":"regulation of CLMF production","type":"related"},{"name":"regulation of IL-12 production","type":"exact"},{"name":"regulation of NKSF production","type":"related"},{"name":"regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032655"}


id: PBO:0052254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 1","termid":"PBO:0052254"}


id: FYPO:0003956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A translation phenotype in which a tRNA pairs with mRNA at the stop codon UAA, and incorporates an amino acid residue into the nascent polypeptide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"UAA suppression","synonyms":[{"name":"UAA suppressor","type":"exact"},{"name":"ochre suppression","type":"exact"},{"name":"ochre suppressor","type":"exact"}],"termid":"FYPO:0003956"}


id: PBO:0082146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the absence of oxygen; ARE1 has a paralog, ARE2, that arose from the whole genome duplication","termid":"PBO:0082146"}


id: PBO:0081336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 135","termid":"PBO:0081336"}


id: PBO:0079432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1 pseudogene","termid":"PBO:0079432"}


id: PR:Q9C0W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial membrane protein C800.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.14c","synonyms":[{"name":"Spom972h-SPBC800.14c","type":"exact"}],"termid":"PR:Q9C0W5"}


id: GO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete general transcriptional repressor activity (obsolete GO:0016565)","synonyms":[{"name":"general transcriptional repressor activity","type":"exact"}],"termid":"GO:0016565"}


id: GO:0005942
data:
  {"annotated_genes":["SJAG_00638","SJAG_01236","SJAG_03403","SJAG_04552","SJAG_02289","SJAG_02699","SJAG_01876","SJAG_04860","SJAG_02665","SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109686,103420,83929,106121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070772"},{"annotations":[107642,88764,98256,93723,90761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[88765,93724,101830,98257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A protein complex capable of phosphatidylinositol 3-kinase activity and containing subunits of any phosphatidylinositol 3-kinase (PI3K) enzyme. These complexes are divided in three classes (called I, II and III) that differ for their presence across taxonomic groups and for the type of their constituents. Catalytic subunits of phosphatidylinositol 3-kinase enzymes are present in all 3 classes; regulatory subunits of phosphatidylinositol 3-kinase enzymes are present in classes I and III; adaptor proteins have been observed in class II complexes and may be present in other classes too.","definition_xrefs":["PMID:24587488","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"extrinsic component of membrane","termid":"GO:0019898"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01236":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02665":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidylinositol 3-kinase complex","type":"exact"},{"name":"PI3-kinase p85-subunit alpha- PI3-kinase p110 complex","type":"narrow"},{"name":"PI3K complex","type":"exact"},{"name":"PIK3C3-PIK3R4 complex","type":"narrow"},{"name":"PIK3CA-PIK3R1 complex","type":"narrow"},{"name":"phosphoinositide 3-kinase complex","type":"exact"}],"termid":"GO:0005942","terms_by_termid":{"GO:0034271":null,"GO:0034272":null,"GO:0070772":null}}


id: GO:0006609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a heterogeneous nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-binding (hnRNP) protein import into nucleus (obsolete GO:0006609)","synonyms":[{"name":"mRNA-binding (hnRNP) protein import into cell nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein transport from cytoplasm to nucleus","type":"exact"},{"name":"mRNA-binding (hnRNP) protein-nucleus import","type":"exact"}],"termid":"GO:0006609"}


id: PBO:0059514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded minor H-strand promoter","termid":"PBO:0059514"}


id: GO:1990696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four proteins, loss of which results in Usher Syndrome type 2 (USH2 syndrome), a leading genetic cause of combined hearing and vision loss. This complex is conserved in many species; in mice, it is composed of USH2A, GPR98 (aka ADGRV1), WHRN, and PDZD7.","definition_xrefs":["PMID:25406310","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"USH2 complex","synonyms":[{"name":"USH2 quaternary protein complex","type":"exact"}],"termid":"GO:1990696"}


id: GO:0042763
data:
  {"annotated_genes":["SJAG_03483","SJAG_04001","SJAG_00974","SJAG_01697","SJAG_00826","SJAG_04948","SJAG_03915","SJAG_03013","SJAG_01769","SJAG_04080","SJAG_03721","SJAG_01855","SJAG_04922","SJAG_01084","SJAG_04781","SJAG_03536","SJAG_02076","SJAG_01825","SJAG_00405","SJAG_00663","SJAG_04470","SJAG_03079","SJAG_02368","SJAG_03638","SJAG_00971","SJAG_03145","SJAG_01469","SJAG_03688","SJAG_00821","SJAG_02169","SJAG_04483","SJAG_01867","SJAG_04275","SJAG_00430","SJAG_02736","SJAG_03250","SJAG_03746","SJAG_04184","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110579,87907,111443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042764"},{"annotations":[87999,109163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905754"},{"annotations":[89023,105435,113596,101405,115078,84405,112358,99384,87435,96969,91507,103513,110203,89701,92767,87642,97606,100298,97834,94955,114601,93684,90598,101090,86885,90005,99432,105198,113033],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005628"},{"annotations":[114602,99047,94956],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[99048,101406,114603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"},{"annotations":[112083,90638,96235,102132],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A cell or part of the cell that constitutes an early developmental stage of a spore, a small reproductive body that is highly resistant to desiccation and heat and is capable of growing into a new organism, produced especially by certain bacteria, fungi, algae, and nonflowering plants.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01084":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01769":null,"SJAG_01825":null,"SJAG_01855":null,"SJAG_01867":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03638":null,"SJAG_03688":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intracellular immature spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore","type":"related"}],"termid":"GO:0042763","terms_by_termid":{"GO:0005628":null,"GO:0032169":null,"GO:0042764":null,"GO:0070056":null,"GO:0070057":null,"GO:1905754":null}}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: PBO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob3","termid":"PBO:0003527"}


id: PBO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.1","termid":"PBO:0000965"}


id: PBO:0027786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_nitrogen_starvation","termid":"PBO:0027786"}


id: GO:1904633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23692924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of podocyte apoptotic process","synonyms":[{"name":"regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"regulation of podocyte apoptosis","type":"narrow"}],"termid":"GO:1904633"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:kmv","PMID:23358451","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: PBO:0071021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 23","termid":"PBO:0071021"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: GO:1990037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center portion of a Lewy body. In Parkinson's disease, it contains a matted meshwork of filaments.","definition_xrefs":["NIF_Subcellular:sao6587439252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body core","termid":"GO:1990037"}


id: PBO:0049847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 9","termid":"PBO:0049847"}


id: PBO:0055378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2808","termid":"PBO:0055378"}


id: PBO:0057619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-2","termid":"PBO:0057619"}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: GO:0016501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostacyclin (PGI(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostacyclin receptor activity","secondary_identifiers":["GO:0004959"],"synonyms":[{"name":"PGI receptor activity","type":"related"},{"name":"PGI(2) receptor activity","type":"exact"},{"name":"prostaglandin I receptor activity","type":"exact"}],"termid":"GO:0016501"}


id: PBO:0091016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1","termid":"PBO:0091016"}


id: GO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a sugar or dicarbonyl from a glycated L-arginine, L-lysine or L-cysteine residue within proteins that have been attacked and modified by glyoxal or 2-oxopropanal.","definition_xrefs":["PMID:14568004","GOC:PARL","EC:3.5.1.124","PMID:26873906","GOC:bf","PMID:25416785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0140096","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein deglycase activity","secondary_identifiers":["MetaCyc:RXN-17630","MetaCyc:RXN-17632","MetaCyc:RXN-17634"],"synonyms":[{"name":"glyoxylase III","type":"exact"},{"name":"protein deglycating enzyme","type":"related"}],"termid":"GO:0036524"}


id: PBO:0111426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo6","termid":"PBO:0111426"}


id: GO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion transport","synonyms":[{"name":"activation of potassium ion transport","type":"narrow"},{"name":"positive regulation of K+ conductance","type":"narrow"},{"name":"positive regulation of K+ transport","type":"exact"},{"name":"positive regulation of potassium conductance","type":"narrow"},{"name":"positive regulation of potassium ion conductance","type":"narrow"},{"name":"positive regulation of potassium transport","type":"exact"},{"name":"stimulation of potassium ion transport","type":"narrow"},{"name":"up regulation of potassium ion transport","type":"exact"},{"name":"up-regulation of potassium ion transport","type":"exact"},{"name":"upregulation of potassium ion transport","type":"exact"}],"termid":"GO:0043268"}


id: PBO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 11","termid":"PBO:0047380"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: SO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The interbase position where something (eg an aberration) occurred.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000408 site (obsolete SO:0000408)","termid":"SO:0000408"}


id: MOD:00079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-methyl-L-asparagine.","definition_xrefs":["OMSSA:75","PubMed:2356973","PubMed:11875433","PubMed:3782095","RESID:AA0070","Unimod:34#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"},{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4-methyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-N4-methylbutanediamic acid","type":"exact"},{"name":"MOD_RES N4-methylasparagine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(gamma)-methylasparagine","type":"exact"},{"name":"N-methylasparagine","type":"exact"},{"name":"N4-methyl-L-asparagine","type":"exact"},{"name":"N4-methylated L-asparagine","type":"exact"},{"name":"N4Me1Asn","type":"exact"},{"name":"beta-aspartyl methylamide","type":"exact"},{"name":"beta-methylasparagine","type":"related"},{"name":"methyln","type":"exact"}],"termid":"MOD:00079"}


id: PBO:0068501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 88, pseudogene","termid":"PBO:0068501"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: FYPO:0004448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"},{"relation_name":"output_of","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized protein during meiotic cell cycle","synonyms":[{"name":"mislocalised protein during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004448"}


id: GO:0043130
data:
  {"annotated_genes":["SJAG_00941","SJAG_01051","SJAG_02451","SJAG_00821","SJAG_03189","SJAG_02116","SJAG_04024","SJAG_01585","SJAG_01936","SJAG_03250","SJAG_02912","SJAG_00805","SJAG_03756","SJAG_00439","SJAG_01467","SJAG_04379","SJAG_00907","SJAG_02021","SJAG_00312","SJAG_00521","SJAG_02833","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57981,60040,60699,61033,62301,65195,66124,67593,70418,71012,71138,72103,72572,73159,74764,75680,76232,76724,77372,77394,77948,78788],"is_not":false,"summary":null,"term":"GO:0043130"}]},"cv_name":"molecular_function","definition":"Binding to ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein binding","termid":"GO:0032182"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00312":null,"SJAG_00439":null,"SJAG_00521":null,"SJAG_00805":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00941":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01467":null,"SJAG_01585":null,"SJAG_01936":null,"SJAG_02021":null,"SJAG_02116":null,"SJAG_02451":null,"SJAG_02833":null,"SJAG_02912":null,"SJAG_03189":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04024":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ubiquitin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-205008","Reactome:R-HSA-1169404","Reactome:R-HSA-983152"],"termid":"GO:0043130","terms_by_termid":{"GO:0043130":null}}


id: PBO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity (predicted)","termid":"PBO:0001316"}


id: GO:0086083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a bundle of His cell with a Purkinje myocyte and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098631","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication","termid":"GO:0086083"}


id: PBO:0091704
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human U2AF2","termid":"PBO:0091704"}


id: PBO:0072384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 10","termid":"PBO:0072384"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: PBO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 3","termid":"PBO:0045092"}


id: GO:2000796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in negative regulation of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment","synonyms":[{"name":"N signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"}],"termid":"GO:2000796"}


id: PBO:0040545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 3","termid":"PBO:0040545"}


id: GO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + 3-hydroxy-2-methylpyridine-5-carboxylate = NADP+ + 2-(acetamidomethylene)succinate.","definition_xrefs":["EC:1.14.13.242","MetaCyc:1.14.12.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridinecarboxylate dioxygenase activity","secondary_identifiers":["RHEA:10864"],"synonyms":[{"name":"2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase activity","type":"related"},{"name":"3-hydroxy-2-methylpyridine-5-carboxylate,NADPH:oxygen oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxy-3-methylpyridinecarboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridine carboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridinecarboxylate oxidase activity","type":"related"}],"termid":"GO:0047081"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84437],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8955706","RHEA:17605","MetaCyc:6.3.2.25-RXN"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: GO:0031690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adrenergic receptor binding","synonyms":[{"name":"adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031690"}


id: PBO:0047340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBN1 divergent transcript","termid":"PBO:0047340"}


id: GO:1901597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbendazim","termid":"GO:1901597"}


id: PBO:0065115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C iota","termid":"PBO:0065115"}


id: PBO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A0","termid":"PBO:0050295"}


id: PBO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_glucose_starvation","termid":"PBO:0030543"}


id: PBO:0039094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase","termid":"PBO:0039094"}


id: PBO:0017849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase Fah1 (predicted)","termid":"PBO:0017849"}


id: PBO:0086172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the ATP-dependent transport of arginine; vacuolar membrane protein; involved in the ATP-dependent transport of arginine into the vacuole and possibly in balancing ion homeostasis; human homolog CLN3 involved in Batten disease (juvenile onset neuronal ceroid lipofuscinosis) can complement yeast null mutant","termid":"PBO:0086172"}


id: PBO:0081378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 217","termid":"PBO:0081378"}


id: PBO:0053971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1282","termid":"PBO:0053971"}


id: GO:0102577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopalmitic acid + H+ = 2-pentadecanone + carbon dioxide.","definition_xrefs":["GOC:pz","EC:4.1.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-oxo-palmitate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-15283"],"termid":"GO:0102577"}


id: GO:0003755
data:
  {"annotated_genes":["SJAG_00950","SJAG_00078","SJAG_03238","SJAG_02551","SJAG_02620","SJAG_00602","SJAG_00470","SJAG_01246","SJAG_04155","SJAG_03601","SJAG_03905","SJAG_02413","SJAG_01005","SJAG_04352","SJAG_01714","SJAG_02308","SJAG_01270"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57781,76860,86137,88127,88910,91458,93998,94583,99041,100608,100803,101510,103774,108552,109787,111412,113403],"is_not":false,"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2022073","RHEA:16237","Reactome:R-HSA-9626816","GO:0004752","GO:0042028","MetaCyc:PEPTIDYLPROLYL-ISOMERASE-RXN"],"synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"narrow"},{"name":"PPIase activity","type":"related"},{"name":"cis-trans proline isomerase activity","type":"exact"},{"name":"cyclophilin activity","type":"related"},{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"immunophilin","type":"related"},{"name":"juglone-sensitive cis-trans proline isomerase activity","type":"narrow"},{"name":"juglone-sensitive peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"parvulin","type":"related"},{"name":"peptide bond isomerase activity","type":"related"},{"name":"peptidyl-prolyl isomerase B reaction","type":"related"},{"name":"peptidylproline cis-trans-isomerase activity","type":"related"},{"name":"peptidylprolyl cis-trans isomerase activity","type":"related"},{"name":"peptidylprolyl isomerase activity","type":"related"},{"name":"rotamase activity","type":"related"}],"termid":"GO:0003755","terms_by_termid":{"GO:0003755":null}}


id: PBO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, truncated","termid":"PBO:0000144"}


id: GO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a leukocyte.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte mediated immunity","secondary_identifiers":["GO:0019723","GO:0042087"],"synonyms":[{"name":"cell-mediated immune response","type":"related"},{"name":"cellular immune response","type":"related"},{"name":"immune cell effector process","type":"exact"},{"name":"immune cell mediated immunity","type":"exact"},{"name":"leucocyte immune effector process","type":"exact"},{"name":"leucocyte mediated immunity","type":"exact"},{"name":"leukocyte immune effector process","type":"exact"}],"termid":"GO:0002443"}


id: PBO:0055267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2694","termid":"PBO:0055267"}


id: PBO:0065191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 3","termid":"PBO:0065191"}


id: PR:000050492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:30853434","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/Phos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046","type":"narrow"},{"name":"mid1/Phos","type":"exact"},{"name":"mid1/Phos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050492"}


id: GO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nicotinamide mononucleotide transmembrane transporter activity","secondary_identifiers":["GO:0015664"],"synonyms":[{"name":"nicotinamide mononucleotide permease activity","type":"related"},{"name":"nicotinamide ribonucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015663"}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: PBO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.130","termid":"PBO:0001647"}


id: MOD:01181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartate 4-methyl ester.","definition_xrefs":["PubMed:9629898","RESID:AA0435","PubMed:16888766","Unimod:34#D","OMSSA:69","PubMed:1556110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated L-aspartic acid","termid":"MOD:01681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-aspartic acid 4-methyl ester","synonyms":[{"name":"(2S)-2-amino-4-methoxy-4-oxobutanoic acid","type":"exact"},{"name":"2-aminobutanedioic acid 4-methyl ester","type":"exact"},{"name":"4-methyl L-2-aminosuccinic acid","type":"exact"},{"name":"4-methyl L-aspartate","type":"exact"},{"name":"4-methyl L-hydrogen aspartate","type":"exact"},{"name":"L-aspartic acid 4-methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"O4MeAsp","type":"exact"},{"name":"aspartic acid 4-methyl ester","type":"exact"},{"name":"aspartic acid beta-methyl ester","type":"exact"},{"name":"meesterd","type":"exact"}],"termid":"MOD:01181"}


id: PBO:0044382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 6","termid":"PBO:0044382"}


id: GO:0032464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"positively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein homooligomerization","synonyms":[{"name":"activation of protein homooligomerization","type":"narrow"},{"name":"induction of protein homooligomerization","type":"related"},{"name":"stimulation of protein homooligomerization","type":"narrow"},{"name":"up regulation of protein homooligomerization","type":"exact"},{"name":"up-regulation of protein homooligomerization","type":"exact"},{"name":"upregulation of protein homooligomerization","type":"exact"}],"termid":"GO:0032464"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: MOD:01306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-hexosaminyl-L-threonine.","definition_xrefs":["Unimod:454#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-hexosaminylated threonine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01306"}


id: PBO:0064801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1CB divergent transcript","termid":"PBO:0064801"}


id: GO:0032049
data:
  {"annotated_genes":["SJAG_04317","SJAG_03563","SJAG_00168","SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89172,102328,109146,113932],"is_not":false,"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"},{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cardiolipin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5269"],"synonyms":[{"name":"diphosphatidylglycerol biosynthesis","type":"related"},{"name":"diphosphatidylglycerol biosynthetic process","type":"related"}],"termid":"GO:0032049","terms_by_termid":{"GO:0032049":null}}


id: GO:0034644
data:
  {"annotated_genes":["SJAG_02818","SJAG_01262","SJAG_02334","SJAG_04190","SJAG_02200","SJAG_04877","SJAG_00729","SJAG_03898","SJAG_00208","SJAG_01648","SJAG_02199","SJAG_01010","SJAG_00814","SJAG_00863","SJAG_00272","SJAG_04150","SJAG_02182","SJAG_05197","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101050,98956,105245,91374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[102061,92160,103112,108404,93267,108955,85747,90108,107547,106955,91408,100358,91198,84208,89801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to UV light stimulus","type":"exact"},{"name":"cellular response to UV radiation stimulus","type":"exact"},{"name":"cellular response to ultraviolet light stimulus","type":"exact"},{"name":"cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0034644","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: GO:0052625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + ATP + amino acid = 4-aminobenzoyl amino acid conjugate + AMP + diphosphate.","definition_xrefs":["MetaCyc:RXN-10884","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"4-aminobenzoate amino acid synthetase activity","synonyms":[{"name":"4-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoate amino acid synthetase activity","type":"exact"},{"name":"p-aminobenzoyl amino acid synthetase activity","type":"exact"},{"name":"pABA amino acid synthetase activity","type":"exact"}],"termid":"GO:0052625"}


id: PBO:0036149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_nitrogen_starvation","termid":"PBO:0036149"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: GO:0031439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA cleavage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA cleavage (obsolete GO:0031439)","synonyms":[{"name":"activation of mRNA cleavage","type":"narrow"},{"name":"stimulation of mRNA cleavage","type":"narrow"},{"name":"up regulation of mRNA cleavage","type":"exact"},{"name":"up-regulation of mRNA cleavage","type":"exact"},{"name":"upregulation of mRNA cleavage","type":"exact"}],"termid":"GO:0031439"}


id: PBO:0075920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 12","termid":"PBO:0075920"}


id: PBO:0030059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0030059"}


id: PBO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase","termid":"PBO:0043973"}


id: PBO:0027353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_thiamine_level_during_stationary_phase","termid":"PBO:0027353"}


id: PBO:0060535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 14 (putative)","termid":"PBO:0060535"}


id: PBO:0080682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS/WASL interacting protein family member 2","termid":"PBO:0080682"}


id: GO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + putrescine = sym-homospermidine + propane-1,3-diamine.","definition_xrefs":["MetaCyc:2.5.1.45-RXN","EC:2.5.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"homospermidine synthase (spermidine-specific) activity","secondary_identifiers":["RHEA:11236"],"synonyms":[{"name":"spermidine:putrescine 4-aminobutyltransferase (propane-1,3-diamine-forming)","type":"related"}],"termid":"GO:0050514"}


id: PBO:0067006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 12, pseudogene","termid":"PBO:0067006"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: PR:000028949
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin oxidized form in Schizosaccharomyces pombe. The disulfide bond involves Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Ox+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"Spom-TXN/Ox+","type":"exact"},{"name":"trx1/Ox+","type":"exact"}],"termid":"PR:000028949"}


id: PBO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1 (predicted)","termid":"PBO:0017943"}


id: PBO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 3","termid":"PBO:0056806"}


id: PBO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin Pcp1","termid":"PBO:0001968"}


id: GO:1900237
data:
  {"annotated_genes":["SJAG_01113","SJAG_03067","SJAG_04206","SJAG_04813","SJAG_05153","SJAG_04009","SJAG_03346","SJAG_06638","SJAG_03309","SJAG_02472","SJAG_00256","SJAG_02066"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84053,95624,96617,97509,99495,100564,103180,104707,104937,112391,115146,115147],"is_not":false,"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_01113":null,"SJAG_02066":null,"SJAG_02472":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_04009":null,"SJAG_04206":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"positive regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion","type":"exact"}],"termid":"GO:1900237","terms_by_termid":{"GO:1900237":null}}


id: GO:1900985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vindoline.","definition_xrefs":["GOC:TermGenie","PMID:12228585","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"vindoline metabolic process","termid":"GO:1900983"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"vindoline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5292"],"synonyms":[{"name":"vindoline anabolism","type":"exact"},{"name":"vindoline biosynthesis","type":"exact"},{"name":"vindoline formation","type":"exact"},{"name":"vindoline synthesis","type":"exact"}],"termid":"GO:1900985"}


id: PBO:0040073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRDC1 antisense RNA 1","termid":"PBO:0040073"}


id: GO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of cysteine to form peptidyl-S-diphytanylglycerol diether-L-cysteine.","definition_xrefs":["RESID:AA0223","PMID:7797461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018115"}


id: GO:0006359
data:
  {"annotated_genes":["SJAG_02898","SJAG_01799","SJAG_00142","SJAG_03931"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87336,89887,104536],"is_not":false,"summary":null,"term":"GO:0006359"},{"annotations":[92529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA ploymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_02898":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006359","terms_by_termid":{"GO:0006359":null,"GO:0016480":null}}


id: PBO:0080540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 1","termid":"PBO:0080540"}


id: FYPO:0009089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of sodium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium chloride and SDS","type":"exact"},{"name":"resistance to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and SDS in combination","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to sodium chloride and SDS","type":"exact"},{"name":"resistant to sodium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009089"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: PBO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 36","termid":"PBO:0072507"}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: PBO:0074362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes flexible hinge domain containing 1","termid":"PBO:0074362"}


id: PBO:0059809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 35","termid":"PBO:0059809"}


id: PBO:0069526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 795, pseudogene","termid":"PBO:0069526"}


id: PBO:0049066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 83","termid":"PBO:0049066"}


id: GO:0046822
data:
  {"annotated_genes":["SJAG_01805","SJAG_04464","SJAG_02592","SJAG_04312","SJAG_01311","SJAG_01245","SJAG_03453","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[96566,97977,107142,89950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[90508,87010,98515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046822","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:0046827":null}}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: PBO:0027389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027389"}


id: GO:0031023
data:
  {"annotated_genes":["SJAG_04781","SJAG_01805","SJAG_00773","SJAG_00594","SJAG_03544","SJAG_04745","SJAG_00719","SJAG_03915","SJAG_01760","SJAG_04558","SJAG_04003","SJAG_03200","SJAG_03052","SJAG_04901","SJAG_00794","SJAG_03264","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100666],"is_not":false,"summary":null,"term":"GO:0031023"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[91446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[74699,90904,91447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[98455,108890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031024"},{"annotations":[89942,111236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[108967,108762,111237,103557,86301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[87443,110062,93013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[85817,91511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051300"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow.","definition_xrefs":["GOC:dph","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_03052":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule organizing center organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"microtubule organising center organisation","type":"exact"},{"name":"microtubule organizing center organization and biogenesis","type":"related"}],"termid":"GO:0031023","terms_by_termid":{"GO:0000073":null,"GO:0031023":null,"GO:0031024":null,"GO:0031025":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1990395":null}}


id: PBO:0077802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated high mobility group box","termid":"PBO:0077802"}


id: MOD:00314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine cholesterol ester.","definition_xrefs":["PubMed:8824192","PubMed:11111088","ChEBI:143135","Unimod:432#C-term","RESID:AA0309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cholesterol ester","synonyms":[{"name":"C-cholesterol","type":"related"},{"name":"LIPID Cholesterol glycine ester","type":"exact"},{"name":"cholesterol ester","type":"related"},{"name":"cholesteryl glycinate","type":"exact"},{"name":"glycine cholest-5-en-3beta-ol ester","type":"exact"},{"name":"glycine cholesterol ester","type":"exact"},{"name":"hedgehog lipophilic adduct","type":"exact"}],"termid":"MOD:00314"}


id: GO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a leucophore cell. Leucophores are pigment cells derived from the neural crest. They contain uric acid or other purine crystals, deposited in stacks called leucosomes. This gives them a white appearance.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucophore differentiation","synonyms":[{"name":"leucophore cell differentiation","type":"exact"}],"termid":"GO:0048772"}


id: GO:1902445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in programmed necrotic cell death.","definition_xrefs":["PMID:22493254","GOC:TermGenie","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"part_of","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in programmed necrotic cell death","synonyms":[{"name":"regulation of transport across mitochondrial membrane involved in programmed necrotic cell death","type":"exact"}],"termid":"GO:1902445"}


id: GO:0072092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud grows along its axis and contributes to the formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud invasion","termid":"GO:0072092"}


id: FYPO:0003736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is normal (i.e. indistinguishable from wild type). The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal mitotic index","termid":"FYPO:0003736"}


id: GO:0006542
data:
  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90409],"is_not":false,"summary":null,"term":"GO:0006542"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLNSYN-PWY"],"synonyms":[{"name":"glutamine anabolism","type":"exact"},{"name":"glutamine biosynthesis","type":"exact"},{"name":"glutamine formation","type":"exact"},{"name":"glutamine synthesis","type":"exact"}],"termid":"GO:0006542","terms_by_termid":{"GO:0006542":null}}


id: GO:0004690
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004691"}]},"cv_name":"molecular_function","definition":"cNMP-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016301","GO:0016740","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004690","terms_by_termid":{"GO:0004691":null}}


id: PBO:0064273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G6","termid":"PBO:0064273"}


id: PBO:0044505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYTH1 pseudogene 1","termid":"PBO:0044505"}


id: GO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resting phase of hair cycle.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telogen","synonyms":[{"name":"hair resting phase","type":"narrow"}],"termid":"GO:0042639"}


id: PBO:0058387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4759","termid":"PBO:0058387"}


id: GO:0097554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.","definition_xrefs":["PMID:16607022","GOC:giardia","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left anterior flagellum","synonyms":[{"name":"left anterior cilium","type":"exact"}],"termid":"GO:0097554"}


id: GO:0019340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzofuran metabolic process","termid":"GO:0018893"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"dibenzofuran catabolic process","secondary_identifiers":["MetaCyc:P662-PWY"],"synonyms":[{"name":"dibenzofuran breakdown","type":"exact"},{"name":"dibenzofuran catabolism","type":"exact"},{"name":"dibenzofuran degradation","type":"exact"}],"termid":"GO:0019340"}


id: PBO:0088062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase involved in ER-associated degradation (ERAD) of misfolded proteins; upon autoubiquitination triggers retrotranslocation of misfolded proteins to cytosol for degradation; genetically linked to the unfolded protein response (UPR); regulated through association with Hrd3p; contains an H2 ring finger; likely plays a general role in targeting proteins that persistently associate with and potentially obstruct the ER-localized translocon","termid":"PBO:0088062"}


id: PBO:0063878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class G","termid":"PBO:0063878"}


id: GO:0009124
data:
  {"annotated_genes":["SJAG_00444","SJAG_03708","SJAG_04882","SJAG_03811","SJAG_04970","SJAG_01859","SJAG_01298","SJAG_04713","SJAG_04354","SJAG_00197","SJAG_00694","SJAG_04634","SJAG_04627","SJAG_03771","SJAG_06634","SJAG_03355","SJAG_04123","SJAG_04845","SJAG_01661","SJAG_01081","SJAG_00964","SJAG_03164","SJAG_01070","SJAG_00533","SJAG_04487","SJAG_02850","SJAG_00044","SJAG_04681","SJAG_02364","SJAG_01814","SJAG_03140","SJAG_04709"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85059,99551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106382,99552,106493,110622,113445,115045,95693,93944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[108042,89556,112833,85624,94634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[89677,112950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[66966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[85552,104508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95116,104509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[111835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[97315,59001,104401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[115046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89899,97940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[93852,106056,111074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009156"},{"annotations":[83662,84645,111030,89103,88114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside monophosphate anabolism","type":"exact"},{"name":"nucleoside monophosphate biosynthesis","type":"exact"},{"name":"nucleoside monophosphate formation","type":"exact"},{"name":"nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009124","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0006226":null,"GO:0006231":null,"GO:0009156":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null}}


id: GO:0099549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by carbon monoxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: PBO:0043145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 13","termid":"PBO:0043145"}


id: GO:0014008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microglia differentiation","termid":"GO:0014006"},{"relation_name":"is_a","term_name":"positive regulation of macrophage differentiation","termid":"GO:0045651"},{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"positively_regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglia differentiation","synonyms":[{"name":"activation of microglia differentiation","type":"narrow"},{"name":"positive regulation of microglial cell differentiation","type":"exact"},{"name":"stimulation of microglia differentiation","type":"narrow"},{"name":"up regulation of microglia differentiation","type":"exact"},{"name":"up-regulation of microglia differentiation","type":"exact"},{"name":"upregulation of microglia differentiation","type":"exact"}],"termid":"GO:0014008"}


id: GO:0046016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"},{"relation_name":"is_a","term_name":"regulation of transcription by glucose","termid":"GO:0046015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription by glucose","synonyms":[{"name":"activation of transcription by glucose","type":"narrow"},{"name":"stimulation of transcription by glucose","type":"narrow"},{"name":"up regulation of transcription by glucose","type":"exact"},{"name":"up-regulation of transcription by glucose","type":"exact"},{"name":"upregulation of transcription by glucose","type":"exact"}],"termid":"GO:0046016"}


id: PBO:0088000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors","termid":"PBO:0088000"}


id: PBO:0070627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 11","termid":"PBO:0070627"}


id: PR:P0CT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1402 gene.","definition_xrefs":["UniProtKB:P0CT57","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.13","synonyms":[{"name":"Spom972h-rps1402","type":"exact"}],"termid":"PR:P0CT57"}


id: PR:O74729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02717","PANTHER:PTHR11071:SF58","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.04c","secondary_identifiers":["UniProtKB:O74729"],"synonyms":[{"name":"PPIase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIH","type":"exact"},{"name":"rotamase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74729"}


id: GO:0006349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic mechanism of regulation of gene expression in which epigenetic modifications (imprints) are established during gametogenesis. For a given gene to show parentally biased expression, the imprint are established exclusively in one of the two parental genomes, thus generating an asymmetry between the maternal and paternal alleles.","definition_xrefs":["PMID:7502071","PMID:11498578","PMID:31896690"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression by genomic imprinting (obsolete GO:0006349)","synonyms":[{"name":"regulation of gene expression by DNA imprinting","type":"exact"},{"name":"regulation of gene expression by genetic imprinting","type":"related"}],"termid":"GO:0006349"}


id: GO:0038150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 2 receptor (CCR2) on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-C chemokine receptor CCR2 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 2 signaling pathway","type":"exact"}],"termid":"GO:0038150"}


id: FYPO:0006939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction progresses in a radially asymmetric fashion.","definition_xrefs":["PMID:30709916","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"asymmetric actomyosin contractile ring contraction","synonyms":[{"name":"asymmetric actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"asymmetric actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"non-concentric actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0006939"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["UM-BBD_enzymeID:e0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: MOD:01929
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an either an L-asparagine residue or an L-aspartic acid residue with an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine.","definition_xrefs":["ChEBI:21862","DeltaMass:0","PubMed:11000116","PubMed:6503713","RESID:AA0294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:01929"}


id: GO:0008683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + H+ = CO2 + succinate semialdehyde.","definition_xrefs":["RHEA:10524","EC:4.1.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00272","MetaCyc:RXN-7774"],"synonyms":[{"name":"2-oxoglutarate carboxy-lyase (succinate-semialdehyde-forming)","type":"related"},{"name":"2-oxoglutarate carboxy-lyase activity","type":"related"},{"name":"alpha-ketoglutarate decarboxylase activity","type":"related"},{"name":"alpha-ketoglutaric decarboxylase activity","type":"related"},{"name":"pre-2-oxoglutarate decarboxylase activity","type":"related"}],"termid":"GO:0008683"}


id: PBO:0040200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 13","termid":"PBO:0040200"}


id: PBO:0054156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1523","termid":"PBO:0054156"}


id: GO:0097498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endothelial tube morphogenesis process by which the tube is increased in length.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube lumen extension","termid":"GO:0097498"}


id: PBO:0068604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 55, pseudogene","termid":"PBO:0068604"}


id: GO:1900464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular hyperosmotic salinity response by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:16278455","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900464)","synonyms":[{"name":"negative regulation of cellular response to hyperosmotic salt stress by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900464"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: PBO:0050591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1 pseudogene 2","termid":"PBO:0050591"}


id: GO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + L-tyrosine + ATP = L-tyrosyl-L-arginine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.3.2.24","RHEA:15345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine-arginine ligase activity","secondary_identifiers":["MetaCyc:TYROSINE--ARGININE-LIGASE-RXN","KEGG_REACTION:R00735"],"synonyms":[{"name":"L-tyrosine:L-arginine ligase (AMP-forming)","type":"related"},{"name":"kyotorphin synthase activity","type":"related"},{"name":"kyotorphin synthetase activity","type":"related"},{"name":"kyotorphin-synthesizing enzyme activity","type":"related"},{"name":"tyrosyl-arginine synthase activity","type":"related"}],"termid":"GO:0050367"}


id: FYPO:0003343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}


id: PBO:0057348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 543","termid":"PBO:0057348"}


id: GO:0035509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphoprotein phosphatase activity","termid":"GO:0032515"},{"relation_name":"is_a","term_name":"regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035509"}


id: PBO:0061052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPBL divergent transcript","termid":"PBO:0061052"}


id: PBO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031529"}


id: PBO:0047874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(q27)","termid":"PBO:0047874"}


id: GO:1905228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GOC:TermGenie","PMID:15659068","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905228)","synonyms":[{"name":"activation of adhesion of symbiont to host epithelial cell","type":"narrow"},{"name":"up regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"up-regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"upregulation of adhesion of symbiont to host epithelial cell","type":"exact"}],"termid":"GO:1905228"}


id: RO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_habitat","termid":"RO:0002303"}


id: PBO:0029672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-angled_actomyosin_contractile_ring","termid":"PBO:0029672"}


id: PBO:0051222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-56 (pseudogene)","termid":"PBO:0051222"}


id: PBO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response pathway signalling (SRP), mediated phosphorylation of Ser402 ensures efficient reinitiation of tip growth and cell division during recovery from particular stress","termid":"PBO:0001385"}


id: PBO:0080983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 18","termid":"PBO:0080983"}


id: GO:0033684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"}


id: PBO:0051223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-81 (non-functional)","termid":"PBO:0051223"}


id: PBO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A7","termid":"PBO:0060718"}


id: PBO:0083345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DAD4/YDR320C-A","termid":"PBO:0083345"}


id: GO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis","termid":"GO:0090171"}


id: GO:0043891
data:
  {"annotated_genes":["SJAG_03828","SJAG_06622","SJAG_00027","SJAG_02945","SJAG_02135","SJAG_03903","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105537,105538,105083,105535,105084,105080,105086,105534,105085,105082,105533,105536,105539,105081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GAPDHSYNEC-RXN"],"synonyms":[{"name":"D-glyceraldehyde 3-phosphate:NAD(P)+ oxidoreductase (phosphorylating)","type":"exact"},{"name":"NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating)","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P))","type":"exact"},{"name":"triosephosphate dehydrogenase (NAD(P)+)","type":"related"}],"termid":"GO:0043891","terms_by_termid":{"GO:0004365":null}}


id: GO:0009867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid.","definition_xrefs":["PMID:20159850","GOC:jy","PMID:16478936","PMID:19522558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"jasmonic acid mediated signaling pathway","synonyms":[{"name":"JA signaling","type":"exact"},{"name":"jasmonate signaling","type":"related"},{"name":"jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009867"}


id: PBO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase (predicted)","termid":"PBO:0001982"}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: GO:0099016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades and ends degradation of its DNA when free DNA ends are exposed. DNA ends are exposed during the life cycle of some viruses and these are targeted by host cells to destroy the virus. For example, some bacteriophages encode proteins that bind to free viral DNA ends, protecting them from degradation by host exonucleases.","definition_xrefs":["VZ:3963","PMID:16949369","PMID:11894948","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of DNA end degradation by host","synonyms":[{"name":"DNA end degradation evasion by virus","type":"exact"},{"name":"evasion by virus of DNA end degradation","type":"related"},{"name":"evasion of DNA end degradation by host","type":"exact"}],"termid":"GO:0099016"}


id: PBO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 6","termid":"PBO:0048237"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: PBO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 4","termid":"PBO:0044653"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: GO:0009543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"chloroplast thylakoid","termid":"GO:0009534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast thylakoid lumen","termid":"GO:0009543"}


id: GO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"}


id: GO:0075029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of a swollen tip at the growing end of a symbiont spore which usually flattens against the host cell surface prior to appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"},{"relation_name":"part_of","term_name":"initiation of appressorium formation","termid":"GO:0075025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of appressorium germ tube hook structure","synonyms":[{"name":"formation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"formation of symbiont germ tube hook structure for appressorium development","type":"exact"},{"name":"formation of symbiont germ tube hook structure on or near host","type":"related"},{"name":"symbiont germ tube hook structure formation on or near host","type":"exact"}],"termid":"GO:0075029"}


id: GO:0102086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vanillate + L-glutamate(1-) + ATP = H+ + N-vanillate-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-vanillate-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10885"],"termid":"GO:0102086"}


id: PBO:0028398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_35S_rRNA_precursor_level","termid":"PBO:0028398"}


id: FYECO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which SDS (sodium dodecyl sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SDS","synonyms":[{"name":"sodium dodecyl sulfate added","type":"exact"}],"termid":"FYECO:0000167"}


id: PBO:0052457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF7 intronic transcript 1","termid":"PBO:0052457"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: PBO:0082956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases intracellular K+ by decreasing efflux; expression repressed by Ssn6p-Tup1p and Sko1p and induced by NaCl, KCl, and sorbitol through Gcn4p","termid":"PBO:0082956"}


id: GO:0000915
data:
  {"annotated_genes":["SJAG_00700","SJAG_04077","SJAG_02700","SJAG_04621","SJAG_03025","SJAG_03048","SJAG_02592","SJAG_04930","SJAG_01732","SJAG_03045","SJAG_01894","SJAG_03703","SJAG_01943","SJAG_02864","SJAG_04887","SJAG_01805","SJAG_04703","SJAG_00938","SJAG_01143","SJAG_04597","SJAG_03596","SJAG_04982","SJAG_00082","SJAG_02831","SJAG_00279","SJAG_02431","SJAG_00268","SJAG_04498","SJAG_00228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106932],"is_not":false,"summary":null,"term":"GO:0000915"},{"annotations":[104267,94170,85503,94425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[95028,108433,113959,73854,114533,115190,94171,97387,94060,88684,98553,88730,84454,93787,104269,107999,114712,88471,113137,91425,98690,93863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98498],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[86170,90547],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[89953,115449,90513],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"The process of assembly of a ring composed of actin, myosin, and associated proteins that will function in cytokinesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["GO:2000708","GO:0045573"],"synonyms":[{"name":"constriction ring assembly","type":"narrow"},{"name":"contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"cytokinesis, actomyosin ring formation","type":"related"},{"name":"cytokinesis, contractile ring assembly","type":"related"},{"name":"myosin filament organisation involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization of constriction ring assembly","type":"related"},{"name":"myosin filament organization of contractile ring assembly","type":"related"}],"termid":"GO:0000915","terms_by_termid":{"GO:0000915":null,"GO:0071520":null,"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: GO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out at the level of a muscle. Muscle tissue is composed of contractile cells or fibers.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle system process","synonyms":[{"name":"muscle physiological process","type":"related"}],"termid":"GO:0003012"}


id: FYPO:0008043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the nucleus is increased during stationary phase.","definition_xrefs":["PMID:36174923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nucleus during stationary phase","termid":"FYPO:0008043"}


id: GO:1902698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to butyrate.","definition_xrefs":["PMID:18727018","GO_REF:0000093","GOC:mengo_curators","GOC:TermGenie","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to butyrate (obsolete GO:1902698)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"pentose breakdown to butyrate","type":"exact"},{"name":"pentose catabolism to butyrate","type":"exact"},{"name":"pentose degradation to butyrate","type":"exact"}],"termid":"GO:1902698"}


id: FYPO:0008102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of tRNA measured in a cell  is increased from normal when the cell is in the vegetative growth phase of the life cycle  during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased tRNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased tRNA production during cellular response to phosphate starvation","type":"related"}],"termid":"FYPO:0008102"}


id: PBO:0077751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 1 membrane trafficking protein","termid":"PBO:0077751"}


id: PBO:0034523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subtelomeric_chromatin_knob_formation","termid":"PBO:0034523"}


id: PR:O94439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein fsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.05c","synonyms":[{"name":"Spom972h-fsc1","type":"exact"}],"termid":"PR:O94439"}


id: GO:1905527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Golgi lumen acidification.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:23447592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular pH reduction","termid":"GO:0032848"},{"relation_name":"is_a","term_name":"regulation of Golgi lumen acidification","termid":"GO:1905526"},{"relation_name":"negatively_regulates","term_name":"Golgi lumen acidification","termid":"GO:0061795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Golgi lumen acidification","synonyms":[{"name":"down regulation of Golgi lumen acidification","type":"exact"},{"name":"down-regulation of Golgi lumen acidification","type":"exact"},{"name":"downregulation of Golgi lumen acidification","type":"exact"},{"name":"inhibition of Golgi lumen acidification","type":"narrow"}],"termid":"GO:1905527"}


id: PATO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000127 relative mass (obsolete PATO:0000127)","termid":"PATO:0000127"}


id: PBO:0055329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2757","termid":"PBO:0055329"}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G1 pseudogene 1","termid":"PBO:0042201"}


id: PBO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 2","termid":"PBO:0080124"}


id: PBO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc1","termid":"PBO:0017874"}


id: PBO:0012587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3","termid":"PBO:0012587"}


id: PBO:0089436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1","termid":"PBO:0089436"}


id: PBO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome-lysosome associated apoptosis and autophagy regulator 1","termid":"PBO:0046151"}


id: PBO:0028348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028348"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: PBO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1 (predicted)","termid":"PBO:0002220"}


id: GO:0102770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-1-phosphatidyl-inositol + a dihydroceramide = an inositol phosphodihydroceramide + a 1,2-diacyl-sn-glycerol.","definition_xrefs":["EC:2.7.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol phosphorylceramide synthase activity","secondary_identifiers":["MetaCyc:RXN-7795"],"termid":"GO:0102770"}


id: PBO:0083726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 121 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in ER and Golgi inheritance in small buds; relocalizes away from bud neck upon DNA replication stress","termid":"PBO:0083726"}


id: PBO:0043916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collapsin response mediator protein 1","termid":"PBO:0043916"}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["EC:1.1.1.271","MetaCyc:1.1.1.271-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: PBO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2250","termid":"PBO:0054836"}


id: MOD:00656
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrocarbyl hydrogen with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"C-methylated residue","synonyms":[{"name":"CMeRes","type":"exact"}],"termid":"MOD:00656"}


id: PBO:0081754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 683","termid":"PBO:0081754"}


id: GO:1901059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-hydroxyphenyl lignin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"},{"relation_name":"is_a","term_name":"p-hydroxyphenyl lignin metabolic process","termid":"GO:1901058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin catabolic process","synonyms":[{"name":"H-lignin catabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin breakdown","type":"exact"},{"name":"p-hydroxyphenyl lignin catabolism","type":"exact"},{"name":"p-hydroxyphenyl lignin degradation","type":"exact"}],"termid":"GO:1901059"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: GO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine 5'-triphosphate,3'-diphosphate + H2O = guanosine 5'-diphosphate,3'-diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity","secondary_identifiers":["MetaCyc:PPPGPPHYDRO-RXN","RHEA:13073"],"synonyms":[{"name":"guanosine 5'-triphosphate 3'-diphosphate 5'-phosphatase activity","type":"related"},{"name":"guanosine 5'-triphosphate-3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine pentaphosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphatase activity","type":"related"},{"name":"guanosine pentaphosphate phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate 5'-phosphohydrolase activity","type":"related"},{"name":"guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase activity","type":"exact"},{"name":"pppGpp 5'-phosphohydrolase activity","type":"related"}],"termid":"GO:0008894"}


id: PBO:0053196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 2","termid":"PBO:0053196"}


id: GO:0008556
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108477],"is_not":false,"summary":null,"term":"GO:0008556"},{"annotations":[108478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + K+(out) = ADP + phosphate + K+(in).","definition_xrefs":["RHEA:16777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type potassium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.6","GO:0015618","MetaCyc:TRANS-RXN-2"],"synonyms":[{"name":"ATP phosphohydrolase (K+-importing)","type":"related"},{"name":"ATP-dependent potassium transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled potassium transmembrane transporter activity","type":"related"},{"name":"K(+)-importing ATPase activity","type":"narrow"},{"name":"K(+)-transporting ATPase activity","type":"related"},{"name":"K+-importing ATPase activity","type":"related"},{"name":"K+-transporting ATPase activity","type":"exact"},{"name":"potassium ABC transporter","type":"narrow"},{"name":"potassium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"potassium transporting ATPase activity","type":"exact"},{"name":"potassium-importing ATPase activity","type":"narrow"},{"name":"potassium-transporting ATPase activity","type":"exact"},{"name":"potassium-uptake-ATPase activity","type":"exact"}],"termid":"GO:0008556","terms_by_termid":{"GO:0008556":null,"GO:0008900":null}}


id: PBO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_actinomycin_D","termid":"PBO:0030721"}


id: GO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"},{"relation_name":"is_a","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoprotein lipid oxidation","termid":"GO:0034439"}


id: GO:0051839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation by host of cytolysis of symbiont cells (obsolete GO:0051839)","termid":"GO:0051839"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PomBase:mah","PMID:15498101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: GO:0008714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + H2O = D-ribose 5-phosphate + adenine.","definition_xrefs":["EC:3.2.2.4","RHEA:20129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"AMP nucleosidase activity","secondary_identifiers":["MetaCyc:AMP-NUCLEOSID-RXN","KEGG_REACTION:R00182"],"synonyms":[{"name":"AMP phosphoribohydrolase activity","type":"related"},{"name":"adenosine monophosphate nucleosidase activity","type":"related"},{"name":"adenylate nucleosidase activity","type":"related"}],"termid":"GO:0008714"}


id: PBO:0030676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_size","termid":"PBO:0030676"}


id: PBO:0047254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member B","termid":"PBO:0047254"}


id: PBO:0042405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 16","termid":"PBO:0042405"}


id: GO:0031516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 730nm. The response may involve a change in conformation.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light photoreceptor activity","termid":"GO:0009883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"far-red light photoreceptor activity","termid":"GO:0031516"}


id: PBO:0081592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 518A","termid":"PBO:0081592"}


id: GO:0120261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of heterochromatin organization","termid":"GO:0120261"}


id: GO:0009372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell signaling process in which single-celled organisms carry out coordinated responses by monitoring their own population density, and often also that of other microbes, by producing small, diffusible, signal molecules, detecting the concentration of these molecules, and triggering a signal transduction pathway when a certain threshold is reached. Quorum sensing can occur amongst microbial communities in the environment or within host organisms.","definition_xrefs":["PMID:16630813","PMID:8288518","GOC:mlg","PMID:15716452","PMID:16497924","PMID:10607620","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"quorum sensing","secondary_identifiers":["Wikipedia:Quorum_sensing","GO:0060247","GO:0010699"],"synonyms":[{"name":"cell-cell signaling involved in quorum sensing","type":"related"},{"name":"detection of cell density by secreted molecule","type":"related"},{"name":"quorum sensing system","type":"exact"}],"termid":"GO:0009372"}


id: PBO:0049529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 pseudogene 1","termid":"PBO:0049529"}


id: PBO:0028287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_mitotic_G2_DNA_damage_checkpoint_signaling","termid":"PBO:0028287"}


id: PR:Q9UT19
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00595","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.09","secondary_identifiers":["UniProtKB:Q9UT19"],"synonyms":[{"name":"Spom972h-metE","type":"exact"},{"name":"cobalamin-independent methionine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"methionine synthase, vitamin-B12 independent isozyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT19"}


id: PBO:0063115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 2","termid":"PBO:0063115"}


id: GO:0140255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:29414789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"}


id: GO:0035106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning to anticipate future events on the basis of past experience with the consequences of one's own behavior.","definition_xrefs":["PMID:14662373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"operant conditioning","secondary_identifiers":["Wikipedia:Operant_conditioning"],"synonyms":[{"name":"instrumental conditioning","type":"exact"}],"termid":"GO:0035106"}


id: PBO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like 2","termid":"PBO:0060232"}


id: PBO:0050944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 16","termid":"PBO:0050944"}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["PMID:11498047","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: FYPO:0006912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clomiphene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on clomiphene","synonyms":[{"name":"normal cell population growth in presence of clomiphene","type":"exact"},{"name":"normal cell population growth on clomiphene","type":"exact"},{"name":"normal cellular response to clomiphene","type":"related"},{"name":"normal vegetative cell population growth on clomiphene","type":"exact"}],"termid":"FYPO:0006912"}


id: PBO:0080499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vexin","termid":"PBO:0080499"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: PBO:0085756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in cell proliferation in response to nutrients; glucose-repressible; involved in signal transduction during cell proliferation in response to nutrients, specifically the establishment of stationary phase; identified as a regulator of IME2; phosphorylates Igo1p and Igo2p; substrate of Pho80p-Pho85p kinase","termid":"PBO:0085756"}


id: GO:0008064
data:
  {"annotated_genes":["SJAG_04479","SJAG_03086","SJAG_00279","SJAG_04982","SJAG_02566","SJAG_04703","SJAG_01993","SJAG_04100","SJAG_01943","SJAG_02700","SJAG_01894","SJAG_00521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84452,95026,88470,110439,114710,88654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[85999,86843,98868,97878,101284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93864,110442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament length","termid":"GO:0030832"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008064","terms_by_termid":{"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenoceptor signaling pathway","type":"exact"}],"termid":"GO:0071875"}


