# terms

id: GO:0051495
data:
  {"annotated_genes":["SJAG_02332","SJAG_03936","SJAG_04597","SJAG_00082","SJAG_03631","SJAG_03581","SJAG_04776","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[90547,86170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[106656,90548,109492,90716,83731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[107560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"positively_regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02332":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04312":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cytoskeleton organization","type":"narrow"},{"name":"positive regulation of cytoskeleton organisation","type":"exact"},{"name":"positive regulation of cytoskeleton organization and biogenesis","type":"related"},{"name":"stimulation of cytoskeleton organization","type":"narrow"},{"name":"up regulation of cytoskeleton organization","type":"exact"},{"name":"up-regulation of cytoskeleton organization","type":"exact"},{"name":"upregulation of cytoskeleton organization","type":"exact"}],"termid":"GO:0051495","terms_by_termid":{"GO:0031117":null,"GO:0110161":null,"GO:1903473":null,"GO:1903501":null}}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: GO:0006924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen and is triggered by T cell receptor stimulation and signals transmitted via various surface-expressed members of the TNF receptor family such as Fas ligand, Fas, and TNF and the p55 and p75 TNF receptors.","definition_xrefs":["PMID:12414721","GOC:mtg_apoptosis","PMID:12752672","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced cell death of T cells","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activation-induced cell death of T lymphocytes","type":"exact"},{"name":"activation-induced cell death of T-cells","type":"exact"},{"name":"activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0006924"}


id: PR:Q09742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.01c gene.","definition_xrefs":["UniProtKB:Q09742","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.01c","synonyms":[{"name":"Spom972h-SPBC12C2.01c","type":"exact"}],"termid":"PR:Q09742"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: PR:Q9UTI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing boundary-establishment protein FUB1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.10","synonyms":[{"name":"Spom972h-fub1","type":"exact"},{"name":"proteasome inhibitor PI31-like protein SPAC15E1.10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI1"}


id: GO:0045070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral genome replication","synonyms":[{"name":"activation of viral genome replication","type":"narrow"},{"name":"stimulation of viral genome replication","type":"narrow"},{"name":"up regulation of viral genome replication","type":"exact"},{"name":"up-regulation of viral genome replication","type":"exact"},{"name":"upregulation of viral genome replication","type":"exact"}],"termid":"GO:0045070"}


id: PBO:0004672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transaminase Car2","termid":"PBO:0004672"}


id: GO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a type I interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["ISBN:0126896631","GOC:add","GOC:signaling","PMID:15546383","PMID:16681834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"type I interferon receptor activity","synonyms":[{"name":"interferon-alpha receptor activity","type":"narrow"},{"name":"interferon-alpha/beta receptor activity","type":"narrow"},{"name":"interferon-beta receptor activity","type":"narrow"},{"name":"interferon-delta receptor activity","type":"narrow"},{"name":"interferon-epsilon receptor activity","type":"narrow"},{"name":"interferon-kappa receptor activity","type":"narrow"},{"name":"interferon-omega receptor activity","type":"narrow"},{"name":"interferon-tau receptor activity","type":"narrow"},{"name":"interferon-zeta receptor activity","type":"narrow"},{"name":"type I IFN receptor activity","type":"exact"}],"termid":"GO:0004905"}


id: GO:0106125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A matrix composed of planar membranes, vesicles and lipid inclusions within the reservosome.","definition_xrefs":["PMID:18452191","PMID:21818313","GOC:ach","PMID:19288526","PMID:15521631","PMID:22425988","PMID:12204365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"reservosome matrix","termid":"GO:0106125"}


id: GO:0098916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from pre to post-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}


id: PBO:0027860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_DNA_damage","termid":"PBO:0027860"}


id: PBO:0067986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 288","termid":"PBO:0067986"}


id: GO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate chain (obsolete GO:0001684)","synonyms":[{"name":"axonemal dynein intermediate chain","type":"exact"}],"termid":"GO:0001684"}


id: GO:0071251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to silicon dioxide","termid":"GO:0034021"},{"relation_name":"is_a","term_name":"cellular response to inorganic substance","termid":"GO:0071241"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to silicon dioxide","synonyms":[{"name":"cellular response to silica","type":"exact"},{"name":"cellular response to silox","type":"exact"}],"termid":"GO:0071251"}


id: FYPO:0002923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is normal (i.e. indistinguishable from wild type). Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"normal histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"normal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002923"}


id: FYPO:0007311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007311"}


id: PBO:0071717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 15","termid":"PBO:0071717"}


id: PBO:0091332
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans Ppz1","termid":"PBO:0091332"}


id: SO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 21S_rRNA, which functions as a component of the large subunit of the ribosome in mitochondria.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002241 rRNA_21S_gene (obsolete SO:0002241)","synonyms":[{"name":"21S rRNA gene","type":"exact"},{"name":"21S_rRNA_gene","type":"exact"}],"termid":"SO:0002241"}


id: GO:0033935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic links in oligoxyloglucans so as to remove successive isoprimeverose (i.e. alpha-xylo-1,6-beta-D-glucosyl-) residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oligoxyloglucan beta-glycosidase activity","secondary_identifiers":["MetaCyc:3.2.1.120-RXN"],"synonyms":[{"name":"isoprimeverose-producing oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan xyloglucohydrolase activity","type":"related"}],"termid":"GO:0033935"}


id: PBO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD nuclear envelope phosphatase 1","termid":"PBO:0044151"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: GO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: creatine(out) + Na+(out) = creatine(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine transmembrane transporter activity","termid":"GO:0005308"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"creatine:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-200396"],"synonyms":[{"name":"sodium/chloride-dependent creatine transporter","type":"broad"}],"termid":"GO:0005309"}


id: PBO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031467"}


id: GO:0009956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial pattern formation","synonyms":[{"name":"radial pattern specification","type":"narrow"}],"termid":"GO:0009956"}


id: FYPO:0004555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize choline, and therefore requires choline in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for choline","synonyms":[{"name":"choline auxotrophy","type":"exact"},{"name":"growth auxotrophic for choline during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for choline during vegetative growth","type":"exact"}],"termid":"FYPO:0004555"}


id: FYECO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleic acid","termid":"FYECO:0000049"}


id: MOD:01207
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01207"}


id: GO:1905424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:bf","PMID:17244647","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905424)","synonyms":[{"name":"regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron differentiation by regulation of Wnt signaling","type":"related"}],"termid":"GO:1905424"}


id: PBO:0006822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase Bst1 (predicted)","termid":"PBO:0006822"}


id: GO:0031380
data:
  {"annotated_genes":["SJAG_02725","SJAG_03356","SJAG_03193"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95680,111526,114054],"is_not":false,"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A complex required for RNAi mediated heterochromatin assembly. In S. pombe this contains RNA-directed RNA polymerase, a putative helicase and a protein containing a pap25 associated domain.","definition_xrefs":["GOC:vw","PMID:15607976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RDRC","type":"exact"},{"name":"Rdr1 complex","type":"narrow"}],"termid":"GO:0031380","terms_by_termid":{"GO:0031380":null}}


id: GO:1900380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of asperthecin biosynthetic process","termid":"GO:1900379"},{"relation_name":"negatively_regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of asperthecin biosynthetic process","synonyms":[{"name":"down regulation of asperthecin biosynthesis","type":"exact"},{"name":"down regulation of asperthecin biosynthetic process","type":"exact"},{"name":"down regulation of asperthecin formation","type":"exact"},{"name":"down regulation of asperthecin synthesis","type":"exact"},{"name":"down-regulation of asperthecin biosynthesis","type":"exact"},{"name":"down-regulation of asperthecin biosynthetic process","type":"exact"},{"name":"down-regulation of asperthecin formation","type":"exact"},{"name":"down-regulation of asperthecin synthesis","type":"exact"},{"name":"downregulation of asperthecin biosynthesis","type":"exact"},{"name":"downregulation of asperthecin biosynthetic process","type":"exact"},{"name":"downregulation of asperthecin formation","type":"exact"},{"name":"downregulation of asperthecin synthesis","type":"exact"},{"name":"inhibition of asperthecin biosynthesis","type":"exact"},{"name":"inhibition of asperthecin biosynthetic process","type":"narrow"},{"name":"inhibition of asperthecin formation","type":"exact"},{"name":"inhibition of asperthecin synthesis","type":"exact"},{"name":"negative regulation of asperthecin biosynthesis","type":"exact"},{"name":"negative regulation of asperthecin formation","type":"exact"},{"name":"negative regulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900380"}


id: PBO:0054285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1676","termid":"PBO:0054285"}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["UniProtKB:Q10367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: GO:0010853
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cyclase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010853","terms_by_termid":{"GO:0010856":null}}


id: PBO:0051387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 4 (pseudogene)","termid":"PBO:0051387"}


id: PBO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 17","termid":"PBO:0050107"}


id: PBO:0080015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 1","termid":"PBO:0080015"}


id: GO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an irinotecan stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to irinotecan","termid":"GO:0061482"}


id: PBO:0035921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0035921"}


id: GO:0141090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein phospho-serine + inositol 5-triphosphate pentakisphosphate = protein diphospho-serine + inositol 5-diphosphate pentakisphosphate.","definition_xrefs":["PMID:36603579","RHEA:64104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein serine pyrophosphorylase activity","synonyms":[{"name":"protein serine pyrophosphatase activity","type":"related"}],"termid":"GO:0141090"}


id: PBO:0086491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide","termid":"PBO:0086491"}


id: GO:0014887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle adaptation","synonyms":[{"name":"cardiac muscle plasticity","type":"related"}],"termid":"GO:0014887"}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GO_REF:0000071","PMID:19260726","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: GO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 6.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 6 signaling pathway","synonyms":[{"name":"TLR6 signaling pathway","type":"exact"},{"name":"toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034150"}


id: SOFP:sp_comment
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sp_comment","termid":"SOFP:sp_comment"}


id: GO:1902191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbutanoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbutanoyl-CoA(4-) metabolic process","termid":"GO:1902189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006629","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902191"}


id: PBO:0081969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 antisense RNA 1","termid":"PBO:0081969"}


id: PBO:0072278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 7","termid":"PBO:0072278"}


id: GO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-L-fucose metabolic process","synonyms":[{"name":"GDP-L-fucose metabolism","type":"exact"}],"termid":"GO:0046368"}


id: PBO:0074778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3K","termid":"PBO:0074778"}


id: PBO:0078470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-8","termid":"PBO:0078470"}


id: PBO:0078649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-5","termid":"PBO:0078649"}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["PMID:18468511","GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: PBO:0004887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)","termid":"PBO:0004887"}


id: PBO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 1","termid":"PBO:0040034"}


id: PBO:0077942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-2","termid":"PBO:0077942"}


id: PBO:0052875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 7-1","termid":"PBO:0052875"}


id: MOD:00904
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-aspartic acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-aspartic acid residue","synonyms":[{"name":"ModAsp","type":"exact"}],"termid":"MOD:00904"}


id: PATO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000306 absolute age value (obsolete PATO:0000306)","termid":"PATO:0000306"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: GO:0032973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"amino acid export across plasma membrane","secondary_identifiers":["GO:0044746"],"synonyms":[{"name":"amino acid efflux","type":"exact"},{"name":"amino acid export","type":"broad"},{"name":"amino acid transmembrane export","type":"broad"}],"termid":"GO:0032973"}


id: GO:0005095
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112422],"is_not":false,"summary":null,"term":"GO:0005095"}]},"cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"GTPase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GIP","type":"broad"}],"termid":"GO:0005095","terms_by_termid":{"GO:0005095":null}}


id: PR:Q9UTL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.15c","synonyms":[{"name":"COG complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog1","type":"exact"}],"termid":"PR:Q9UTL1"}


id: PBO:0068342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113B","termid":"PBO:0068342"}


id: PBO:0089093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase","termid":"PBO:0089093"}


id: PBO:0028466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip_during_mitotic_interphase","termid":"PBO:0028466"}


id: PBO:0038530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 4, N-acyl phospholipase B","termid":"PBO:0038530"}


id: PATO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark purple","termid":"PATO:0001259"}


id: GO:2000638
data:
  {"annotated_genes":["SJAG_02682","SJAG_00293","SJAG_00642","SJAG_01253","SJAG_01150","SJAG_01632","SJAG_03568"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87388,107839,102014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[109566,113092,89824,89825,89826,109564,109565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the SREBP signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"SREBP signaling pathway","termid":"GO:0032933"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01632":null,"SJAG_02682":null,"SJAG_03568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of SREBP-mediated signaling pathway","type":"exact"},{"name":"regulation of SREBP-mediated signalling pathway","type":"exact"}],"termid":"GO:2000638","terms_by_termid":{"GO:2000639":null,"GO:2000640":null}}


id: PBO:0049185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 2","termid":"PBO:0049185"}


id: GO:0018584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,5-trichlorophenoxyacetic acid + 1/2 O2 = glyoxylate + 2,4,5-trichlorophenol.","definition_xrefs":["UM-BBD_reactionID:r0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid oxygenase activity","secondary_identifiers":["EC:1.13.99.-"],"termid":"GO:0018584"}


id: GO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:pg","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lateral pseudopodium assembly (obsolete GO:0031277)","synonyms":[{"name":"activation of lateral pseudopodium formation","type":"narrow"},{"name":"positive regulation of lateral pseudopodium formation","type":"related"},{"name":"stimulation of lateral pseudopodium formation","type":"narrow"},{"name":"up regulation of lateral pseudopodium formation","type":"related"},{"name":"up-regulation of lateral pseudopodium formation","type":"related"},{"name":"upregulation of lateral pseudopodium formation","type":"related"}],"termid":"GO:0031277"}


id: GO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a secretory granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"secretory granule lumen","termid":"GO:0034774"}


id: PBO:0080257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 20 pseudogene","termid":"PBO:0080257"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:17576928"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:0061317)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: PBO:0049434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 11","termid":"PBO:0049434"}


id: PBO:0031414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G2/M_transition_delay","termid":"PBO:0031414"}


id: PBO:0084210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoaconitase; catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway","termid":"PBO:0084210"}


id: GO:1903722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000058","PMID:20616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of centriole elongation","termid":"GO:1903722"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: FYPO:0005976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase B.","definition_xrefs":["PMID:27872152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"increased rate of spindle elongation during anaphase B of mitosis","type":"exact"}],"termid":"FYPO:0005976"}


id: PBO:0028247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_medial_cortical_node_movement_during_contractile_ring_assembly","termid":"PBO:0028247"}


id: GO:1905377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactose stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:26261574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to D-galactose","synonyms":[{"name":"response to D-Gal","type":"exact"},{"name":"response to D-galacto-hexose","type":"exact"}],"termid":"GO:1905377"}


id: PR:Q09171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11624:SF11","OMA:SCHPO03549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.13c","secondary_identifiers":["UniProtKB:Q09171"],"synonyms":[{"name":"PDHE1-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PDHB","type":"exact"}],"termid":"PR:Q09171"}


id: SO:1000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a cytidine to a thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition","synonyms":[{"name":"C to T transition","type":"exact"}],"termid":"SO:1000011"}


id: GO:2000831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of steroid hormone secretion","termid":"GO:2000831"}


id: PR:O13809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.12c gene.","definition_xrefs":["UniProtKB:O13809","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C17H9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.12c","synonyms":[{"name":"Spom972h-SPAC17H9.12c","type":"exact"}],"termid":"PR:O13809"}


id: PBO:0045806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early endosome antigen 1","termid":"PBO:0045806"}


id: PBO:0076368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 5","termid":"PBO:0076368"}


id: FYPO:0002421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has an abnormal shape and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division","termid":"FYPO:0001042"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell or double division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002421"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: PBO:0068093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 400","termid":"PBO:0068093"}


id: PBO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated proten Vts1 (predicted)","termid":"PBO:0001393"}


id: PBO:0058925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7d","termid":"PBO:0058925"}


id: FYPO:0000520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular respiration","termid":"FYPO:0000565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased oxidative phosphorylation","synonyms":[{"name":"increased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: increased","type":"related"}],"termid":"FYPO:0000520"}


id: GO:0072232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the S2 portion of the metanephric proximal convoluted tubule over time, from its formation to the mature structure. The S2 portion of the metanephric proximal tubule is involved in reabsorption of water and sodium chloride.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal convoluted tubule segment 2 development","termid":"GO:0072032"},{"relation_name":"part_of","term_name":"metanephric proximal convoluted tubule development","termid":"GO:0072229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal convoluted tubule segment 2 development","synonyms":[{"name":"metanephric S2 development","type":"exact"}],"termid":"GO:0072232"}


id: PBO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis","termid":"PBO:0031378"}


id: SO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature (CNV) are either increased or decreased.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_variant","termid":"SO:0002160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_change","synonyms":[{"name":"copy number change","type":"exact"}],"termid":"SO:0001563"}


id: PBO:0049266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin E","termid":"PBO:0049266"}


id: GO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water.","definition_xrefs":["GOC:jp","GOC:mah","PMID:9797333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"part_of","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose metabolism in response to water deprivation","synonyms":[{"name":"trehalose metabolic process involved in response to water deprivation","type":"exact"}],"termid":"GO:0070416"}


id: GO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of ecdysteroid secretion","synonyms":[{"name":"down regulation of ecdysteroid secretion","type":"exact"},{"name":"down-regulation of ecdysteroid secretion","type":"exact"},{"name":"downregulation of ecdysteroid secretion","type":"exact"},{"name":"inhibition of ecdysteroid secretion","type":"narrow"}],"termid":"GO:0045999"}


id: GO:0052181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont defense response (obsolete GO:0052181)","termid":"GO:0052181"}


id: GO:0090085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein deubiquitination","termid":"GO:0090085"}


id: PBO:0082360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-related protein and dual specificity member of the E1 family; mediates the attachment of Atg12p to Atg5p and Atg8p to phosphatidylethanolamine which are required steps in autophagosome formation; E1 enzymes are also known as ubiquitin-activating enzymes; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0082360"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: MOD:01362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-thiophospho-L-serine.","definition_xrefs":["PubMed:12110917","PubMed:11507762","Unimod:260#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-serine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01362"}


id: GO:1901399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta3 activation (obsolete GO:1901399)","synonyms":[{"name":"down regulation of TGF-beta 3 activation","type":"exact"},{"name":"down regulation of TGFB3 activation","type":"exact"},{"name":"down regulation of TGFbeta 3 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"down-regulation of TGF-beta 3 activation","type":"exact"},{"name":"down-regulation of TGFB3 activation","type":"exact"},{"name":"down-regulation of TGFbeta 3 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"downregulation of TGF-beta 3 activation","type":"exact"},{"name":"downregulation of TGFB3 activation","type":"exact"},{"name":"downregulation of TGFbeta 3 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta3 activation","type":"exact"},{"name":"inhibition of TGF-beta 3 activation","type":"exact"},{"name":"inhibition of TGFB3 activation","type":"exact"},{"name":"inhibition of TGFbeta 3 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta3 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 3 activation","type":"exact"},{"name":"negative regulation of TGFB3 activation","type":"exact"},{"name":"negative regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901399"}


id: PBO:0024856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage ubiquitin-protein ligase E3 Mpe1 (predicted)","termid":"PBO:0024856"}


id: PBO:0066169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 2","termid":"PBO:0066169"}


id: GO:0106341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2,3-tri-(9Z,12Z)-octadecadienoylglycerol + N-(30-hydroxytriacontanoyl)-sphing-4-enine = di-(9Z,12Z)-octadecadienoylglycerol + N-[30-(9Z,12Z-octadecadienoyloxy)-triacontanoyl]-sphing-4-enine.","definition_xrefs":["PMID:28248318","RHEA:55264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"omega-hydroxyceramide transacylase activity","termid":"GO:0106341"}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["GOC:mah","PMID:15556404","PMID:17525341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: PBO:0040503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase C","termid":"PBO:0040503"}


id: PBO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 3","termid":"PBO:0045977"}


id: PBO:0081056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 13","termid":"PBO:0081056"}


id: FYPO:0000855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning in heterochromatin","synonyms":[{"name":"abnormal nucleosome occupancy in heterochromatin","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000855"}


id: PBO:0015231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens PSMD14","termid":"PBO:0015231"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:23447642","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: GO:0030148
data:
  {"annotated_genes":["SJAG_02488","SJAG_02429","SJAG_01356","SJAG_02590","SJAG_05311","SJAG_03015","SJAG_00880","SJAG_04913","SJAG_03690","SJAG_04178","SJAG_01300","SJAG_04878","SJAG_03076","SJAG_00506","SJAG_04550","SJAG_01057","SJAG_03953","SJAG_00176","SJAG_02085","SJAG_04986","SJAG_01219","SJAG_02885","SJAG_01857","SJAG_02168","SJAG_02305","SJAG_02842","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85674,86764,87949,88090,89694,91281,93640,96366,97537,98286,102003,105763,105851,108664,110902,113604],"is_not":false,"summary":null,"term":"GO:0030148"},{"annotations":[88049,88924,101661,104949,105850,106204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[91874,86900,91390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[88925,102107,105852,93044,93800,101662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00506":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03076":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5129"],"synonyms":[{"name":"sphingolipid anabolism","type":"exact"},{"name":"sphingolipid biosynthesis","type":"exact"},{"name":"sphingolipid formation","type":"exact"},{"name":"sphingolipid synthesis","type":"exact"}],"termid":"GO:0030148","terms_by_termid":{"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: PR:O13938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C23H3.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.04","synonyms":[{"name":"Spom972h-SPAC23H3.04","type":"exact"}],"termid":"PR:O13938"}


id: FYPO:0002288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0002288)","synonyms":[{"name":"abolished peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein tyrosine phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002288"}


id: PBO:0038490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1","termid":"PBO:0038490"}


id: FYPO:0008142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount heme measured in a cell is too low to detect.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"heme absent from cell","termid":"FYPO:0008142"}


id: PBO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m5U54) methyltransferase Trm2 (predicted)","termid":"PBO:0000582"}


id: PBO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal mitochondrial protein","termid":"PBO:0003948"}


id: PBO:0064670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 5","termid":"PBO:0064670"}


id: PR:O13693
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.14 gene.","definition_xrefs":["UniProtKB:O13693","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.14","synonyms":[{"name":"Spom972h-SPAC11E3.14","type":"exact"}],"termid":"PR:O13693"}


id: PBO:0072602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase related","termid":"PBO:0072602"}


id: PBO:0069892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1181, pseudogene","termid":"PBO:0069892"}


id: PBO:0081197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIM2 antisense RNA 1","termid":"PBO:0081197"}


id: PBO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rogdi atypical leucine zipper","termid":"PBO:0070383"}


id: PBO:0072609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 4","termid":"PBO:0072609"}


id: GO:0006702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androgen metabolic process","termid":"GO:0008209"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"androgen biosynthetic process","synonyms":[{"name":"androgen anabolism","type":"exact"},{"name":"androgen biosynthesis","type":"exact"},{"name":"androgen formation","type":"exact"},{"name":"androgen synthesis","type":"exact"}],"termid":"GO:0006702"}


id: PBO:0067797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 99","termid":"PBO:0067797"}


id: PBO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_heat_shock","termid":"PBO:0035900"}


id: PBO:0077384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 125","termid":"PBO:0077384"}


id: PBO:0066789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 88","termid":"PBO:0066789"}


id: GO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"tRNA modification guide activity","termid":"GO:0030557"}


id: PBO:0081158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, FOG family member 2","termid":"PBO:0081158"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: GO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (systematic name, tetradecanoyl) group to a sulfur atom on a cysteine residue of a protein molecule in the reaction: tetradecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-tetradecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:22247542","RHEA:59736","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-myristoyltransferase activity","termid":"GO:0019705"}


id: PBO:0051232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-30-21 (pseudogene)","termid":"PBO:0051232"}


id: PBO:0055297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2724","termid":"PBO:0055297"}


id: FYPO:0003008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to zinc. Specific genes are more highly transcribed in the presence of zinc in the mutant than in wild type.","definition_xrefs":["PomBase:mah","PMID:22496451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to zinc","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to zinc","type":"exact"},{"name":"decreased repression of transcription during cellular response to zinc during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to zinc during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to zinc","type":"exact"},{"name":"reduced repression of transcription during cellular response to zinc","type":"exact"}],"termid":"FYPO:0003008"}


id: PATO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's forming a bundle of aligned anatomical fibers, as of muscle or nerve.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciculation","termid":"PATO:0002013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculated","synonyms":[{"name":"fascicled","type":"exact"}],"termid":"PATO:0001861"}


id: PBO:0074390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 1 (Vel blood group)","termid":"PBO:0074390"}


id: FYPO:0005748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein export from nucleus during glucose starvation","synonyms":[{"name":"normal protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"normal protein export from nucleus during glucose depletion","type":"exact"},{"name":"normal protein export from nucleus during glucose deprivation","type":"exact"},{"name":"normal protein export from nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0005748"}


id: PBO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF2 (predicted)","termid":"PBO:0000785"}


id: PBO:0065326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 50","termid":"PBO:0065326"}


id: GO:0022035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere.","definition_xrefs":["GO_REF:0000021","PMID:15629700","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell migration","termid":"GO:0022035"}


id: FYPO:0004518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","termid":"FYPO:0002170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004518"}


id: PBO:0028451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_cell,_single_septa_between_nuclei,_during_stationary_phase","termid":"PBO:0028451"}


id: FYPO:0003642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal urease activity","termid":"FYPO:0003642"}


id: PR:O13978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg101 gene.","definition_xrefs":["UniProtKB:O13978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 66 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.03","synonyms":[{"name":"Spom972h-atg101","type":"exact"},{"name":"autophagy-related protein 101 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13978"}


id: GO:1903638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16374546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of protein insertion into mitochondrial outer membrane","termid":"GO:1903636"},{"relation_name":"is_a","term_name":"positive regulation of protein targeting to mitochondrion","termid":"GO:1903955"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0007005","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"activation of mitochondrial outer membrane protein import","type":"narrow"},{"name":"activation of protein import into mitochondrial outer membrane","type":"narrow"},{"name":"activation of protein insertion into mitochondrial outer membrane","type":"narrow"},{"name":"activation of protein transport into mitochondrial outer membrane","type":"narrow"},{"name":"positive regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"positive regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"positive regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"up regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"up regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"up-regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"up-regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"upregulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"upregulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903638"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: PBO:0029309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell","termid":"PBO:0029309"}


id: PBO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.1","termid":"PBO:0001601"}


id: GO:0016630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.","definition_xrefs":["EC:1.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"protochlorophyllide reductase activity","secondary_identifiers":["RHEA:11132","MetaCyc:RXN1F-10"],"synonyms":[{"name":"NADPH-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"NADPH-protochlorophyllide reductase activity","type":"related"},{"name":"NADPH2-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ 7,8-oxidoreductase activity","type":"related"},{"name":"protochlorophyllide oxidoreductase activity","type":"related"},{"name":"protochlorophyllide photooxidoreductase activity","type":"related"}],"termid":"GO:0016630"}


id: PBO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease S. Pombe","termid":"PBO:0002831"}


id: GO:0102657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:15579662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity","secondary_identifiers":["MetaCyc:RXN-1728","EC:1.14.19.42"],"termid":"GO:0102657"}


id: SO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A position or feature within a sequence that is identical to the comparable position or feature of a specified reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_comparison","termid":"SO:0002072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no_sequence_alteration","synonyms":[{"name":"no sequence alteration","type":"exact"}],"termid":"SO:0002073"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: PBO:0111427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo2","termid":"PBO:0111427"}


id: PBO:0030978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030978"}


id: SO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: GO:0042779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA; may involve endonucleolytic or exonucleolytic cleavage, or both.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA 3'-trailer cleavage (obsolete GO:0042779)","synonyms":[{"name":"removal of tRNA 3'-trailer sequence","type":"exact"},{"name":"tRNA 3'-end cleavage","type":"exact"}],"termid":"GO:0042779"}


id: PBO:0041085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain and CAAX motif containing","termid":"PBO:0041085"}


id: PBO:0041205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Burkitt lymphoma variant rearranging region 1","termid":"PBO:0041205"}


id: GO:0060389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to a pathway restricted SMAD protein. A pathway restricted SMAD protein is an effector protein that acts directly downstream of the transforming growth factor family receptor.","definition_xrefs":["ISBN:3527303782","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-restricted SMAD protein phosphorylation (obsolete GO:0060389)","synonyms":[{"name":"R-SMAD protein phosphorylation","type":"exact"},{"name":"pathway restricted SMAD protein phosphorylation","type":"exact"},{"name":"receptor regulated SMAD protein phosphorylation","type":"exact"},{"name":"receptor-regulated SMAD protein phosphorylation","type":"exact"}],"termid":"GO:0060389"}


id: PBO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 35","termid":"PBO:0071429"}


id: GO:0035489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/G mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanine/guanine mispair binding","synonyms":[{"name":"G/G mispair binding","type":"exact"}],"termid":"GO:0035489"}


id: MOD:01556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01556"}


id: PBO:0080749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 5","termid":"PBO:0080749"}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["ISBN:0781702534","ISBN:0781718325","PMID:11581394","PMID:9188566","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["GO:0046801","GO:0046743","GO:0046742"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: GO:1905000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:mtg_cardiac_conduct_nov11","GOC:rph","PMID:21098446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell membrane repolarization","termid":"GO:0060372"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"regulates","term_name":"membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:0098914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"regulation of atrial repolarization","type":"related"},{"name":"regulation of electrocardiogram QRS complex","type":"related"}],"termid":"GO:1905000"}


id: GO:1905142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GO_REF:0000058","PMID:18359901","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of apical ectodermal ridge formation","termid":"GO:1905140"},{"relation_name":"positively_regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical ectodermal ridge formation","synonyms":[{"name":"activation of AER formation","type":"related"},{"name":"positive regulation of AER formation","type":"related"},{"name":"positive regulation of apical epidermal ridge formation","type":"exact"},{"name":"positive regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"up regulation of AER formation","type":"related"},{"name":"up regulation of apical ectodermal ridge formation","type":"exact"},{"name":"up regulation of apical epidermal ridge formation","type":"exact"},{"name":"up regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"up-regulation of AER formation","type":"related"},{"name":"up-regulation of apical ectodermal ridge formation","type":"exact"},{"name":"up-regulation of apical epidermal ridge formation","type":"exact"},{"name":"up-regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"upregulation of AER formation","type":"related"},{"name":"upregulation of apical ectodermal ridge formation","type":"exact"},{"name":"upregulation of apical epidermal ridge formation","type":"exact"},{"name":"upregulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905142"}


id: PBO:0056211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6","termid":"PBO:0056211"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of tyramine to form octopamine.","definition_xrefs":["PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","termid":"GO:0004836"}


id: PBO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase (predicted)","termid":"PBO:0002246"}


id: PBO:0089695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar CorA family magnesium ion transmembrane transporter Mnr2","termid":"PBO:0089695"}


id: PBO:0074368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm mitochondria associated cysteine rich protein","termid":"PBO:0074368"}


id: GO:0009583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus","synonyms":[{"name":"detection of light","type":"exact"},{"name":"perception of light","type":"related"}],"termid":"GO:0009583"}


id: GO:0034501
data:
  {"annotated_genes":["SJAG_01297","SJAG_03540","SJAG_04259","SJAG_04126","SJAG_02761","SJAG_03327","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97456,97925,109917],"is_not":false,"summary":null,"term":"GO:0034501"},{"annotations":[96514,100034,104396,114738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the kinetochore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"condensin localization to kinetochore","type":"narrow"},{"name":"protein localisation to kinetochore","type":"exact"}],"termid":"GO:0034501","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: PBO:0088748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-6 family microtubule motor protein Klp9","termid":"PBO:0088748"}


id: FYPO:0001109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of menadione than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to menadione","synonyms":[{"name":"resistance to menadione during mitotic cell cycle","type":"related"},{"name":"resistance to menadione during vegetative growth","type":"exact"},{"name":"resistance to vitamin K3","type":"related"},{"name":"resistant to menadione","type":"exact"}],"termid":"FYPO:0001109"}


id: PBO:0070625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 9","termid":"PBO:0070625"}


id: FYPO:0004358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphatase activity","termid":"FYPO:0001758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased protein phosphatase activity during mitosis","synonyms":[{"name":"increased phosphoprotein phosphatase activity during mitosis","type":"exact"},{"name":"increased protein phosphatase activity during mitotic M phase","type":"related"},{"name":"increased protein phosphatase activity during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004358"}


id: PBO:0048945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOSR2 divergent transcript","termid":"PBO:0048945"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:bf","GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: PBO:0028514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028514"}


id: PATO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of a tissue or organ due to failure to develop.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis","termid":"PATO:0002291"}


id: PBO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF9 antisense RNA 1","termid":"PBO:0052361"}


id: GO:0035305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the stops, prevents, or reduces the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dephosphorylation","synonyms":[{"name":"down regulation of dephosphorylation","type":"exact"},{"name":"down-regulation of dephosphorylation","type":"exact"},{"name":"downregulation of dephosphorylation","type":"exact"},{"name":"inhibition of dephosphorylation","type":"narrow"}],"termid":"GO:0035305"}


id: FYPO:0003800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at an origin of replication.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at replication origin","synonyms":[{"name":"normal chromatin binding at origin of replication","type":"exact"}],"termid":"FYPO:0003800"}


id: SO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule that is the product of a longer exogenous or endogenous dsRNA, which is either a bimolecular duplex or very long hairpin, processed (via the Dicer pathway) such that numerous siRNAs accumulate from both strands of the dsRNA. siRNAs trigger the cleavage of their target molecules.","definition_xrefs":["PMID:12592000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/SiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:siRNA","type":"exact"},{"name":"small interfering RNA","type":"exact"}],"termid":"SO:0000646"}


id: GO:0097607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nuclear envelope permeability (obsolete GO:0097607)","synonyms":[{"name":"negative regulation of nuclear membrane permeability","type":"related"}],"termid":"GO:0097607"}


id: GO:0071072
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187","SJAG_03940","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105867,108870],"is_not":false,"summary":null,"term":"GO:0071072"},{"annotations":[111585,107497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phospholipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phospholipid biosynthetic process","type":"exact"},{"name":"down-regulation of phospholipid biosynthetic process","type":"exact"},{"name":"downregulation of phospholipid biosynthetic process","type":"exact"},{"name":"inhibition of phospholipid biosynthetic process","type":"narrow"},{"name":"negative regulation of phospholipid anabolism","type":"exact"},{"name":"negative regulation of phospholipid biosynthesis","type":"exact"},{"name":"negative regulation of phospholipid formation","type":"exact"},{"name":"negative regulation of phospholipid synthesis","type":"exact"}],"termid":"GO:0071072","terms_by_termid":{"GO:0071072":null,"GO:2001211":null}}


id: PBO:0091892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1773 family protein, with repeat expansion","termid":"PBO:0091892"}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["UniProtKB:Q10086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: PBO:0062168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 11 pseudogene","termid":"PBO:0062168"}


id: PBO:0066251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein X-linked","termid":"PBO:0066251"}


id: PBO:0074444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 45","termid":"PBO:0074444"}


id: GO:0035274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diphenyl phthalate, C(20)H(14)O(4).","direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diphenyl phthalate binding","synonyms":[{"name":"DPP binding","type":"exact"}],"termid":"GO:0035274"}


id: GO:1904061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16310969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of locomotor rhythm","termid":"GO:1904059"},{"relation_name":"positively_regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotor rhythm","synonyms":[{"name":"activation of circadian locomotor activity rhythm","type":"narrow"},{"name":"activation of locomotor rhythm","type":"narrow"},{"name":"positive regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"up regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"up regulation of locomotor rhythm","type":"exact"},{"name":"up-regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"up-regulation of locomotor rhythm","type":"exact"},{"name":"upregulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"upregulation of locomotor rhythm","type":"exact"}],"termid":"GO:1904061"}


id: PBO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3","termid":"PBO:0047690"}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: PBO:0028211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutively_activated_MAPK_cascade_involved_in_cell_wall_organization_or_biogenesis","termid":"PBO:0028211"}


id: GO:0033543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to trans-2-enoyl-CoA by 2,4-dienoyl-CoA reductase and delta3-delta2-enoyl-CoA isomerase; trans-2-enoyl-CoA returns to the core beta-oxidation pathway for further degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway","termid":"GO:0033543"}


id: PBO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase Fmp31 (predicted)","termid":"PBO:0002245"}


id: PBO:0051723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor related receptor","termid":"PBO:0051723"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: PBO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 1 polycomb repressive complex 2 subunit","termid":"PBO:0046786"}


id: PBO:0044209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin O","termid":"PBO:0044209"}


id: GO:0003135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in heart induction (obsolete GO:0003135)","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003135"}


id: PBO:0059951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 37","termid":"PBO:0059951"}


id: PBO:0058290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4665","termid":"PBO:0058290"}


id: PBO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein (predicted)","termid":"PBO:0001890"}


id: PBO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARP","termid":"PBO:0018212"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: GO:0005637
data:
  {"annotated_genes":["SJAG_05226","SJAG_05196","SJAG_01745","SJAG_00680","SJAG_03449","SJAG_03491","SJAG_01263","SJAG_03657"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85250,87482,89979,98943,99538,102067,113641,114234],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[113642,102068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01263":null,"SJAG_01745":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1612527463"],"synonyms":[{"name":"inner envelope","type":"broad"},{"name":"inner nuclear membrane","type":"exact"},{"name":"nucleus inner membrane","type":"exact"}],"termid":"GO:0005637","terms_by_termid":{"GO:0005637":null,"GO:1990862":null}}


id: PBO:0027604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0027604"}


id: PBO:0051229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-26-2 (pseudogene)","termid":"PBO:0051229"}


id: PBO:0058238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4526","termid":"PBO:0058238"}


id: GO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C5a anaphylatoxin chemotactic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C5a anaphylatoxin chemotactic receptor binding","synonyms":[{"name":"C5a anaphylatoxin chemotactic receptor ligand","type":"narrow"}],"termid":"GO:0031714"}


id: PBO:0054061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1405","termid":"PBO:0054061"}


id: PBO:0078252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 27","termid":"PBO:0078252"}


id: CHEBI:52651
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin","termid":"CHEBI:52651"}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["UniProtKB:Q9C0Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: GO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a high voltage-gated calcium channel.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"generation of L-type calcium current","type":"related"}],"termid":"GO:0061577"}


id: PBO:0067500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 636, pseudogene","termid":"PBO:0067500"}


id: SO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_alteration is a sequence_feature whose extent is the deviation from another sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_comparison","termid":"SO:0002072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_alteration","secondary_identifiers":["SO:1000004","SO:1000007"],"synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_feature:variation","type":"exact"},{"name":"INSDC_note:sequence_alteration","type":"exact"},{"name":"partially characterised change in DNA sequence","type":"narrow"},{"name":"partially_characterised_change_in_DNA_sequence","type":"narrow"},{"name":"sequence alteration","type":"exact"},{"name":"sequence variation","type":"related"},{"name":"uncharacterised_change_in_nucleotide_sequence","type":"narrow"}],"termid":"SO:0001059"}


id: PATO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000042 relative distance (obsolete PATO:0000042)","termid":"PATO:0000042"}


id: GO:0043112
data:
  {"annotated_genes":["SJAG_02619","SJAG_03324","SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113399,97429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016562"},{"annotations":[98789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001881"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_02619":null,"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor metabolism","type":"exact"}],"termid":"GO:0043112","terms_by_termid":{"GO:0001881":null,"GO:0016562":null}}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:31911490","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos(T50)","type":"exact"}],"termid":"PR:000050454"}


id: FYPO:0003656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to vanadate ions (VO4(3-)). Cells stop growing (and may die) at a concentration of vanadate ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to vanadate","secondary_identifiers":["FYPO:0000718"],"synonyms":[{"name":"hypersensitive to trisodium vanadate","type":"narrow"},{"name":"hypersensitive to vanadate","type":"exact"},{"name":"sensitive to sodium orthovanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate","type":"narrow"},{"name":"sensitive to trisodium vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to trisodium vanadate during vegetative growth","type":"narrow"},{"name":"sensitive to vanadate during mitotic cell cycle","type":"related"},{"name":"sensitive to vanadate during vegetative growth","type":"exact"},{"name":"sensitive to vanadate ions","type":"exact"},{"name":"sensitive to vanadate(3-)","type":"exact"},{"name":"sensitive to vanadium oxoanion","type":"broad"}],"termid":"FYPO:0003656"}


id: PBO:0062508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 3","termid":"PBO:0062508"}


id: MOD:00498
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen of a residue with a fluorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorinated residue","synonyms":[{"name":"FRes","type":"exact"},{"name":"Fluoro","type":"related"},{"name":"Fluorophenylalanyl","type":"exact"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:00498"}


id: PBO:0087562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Snt2C complex, RING finger ubiquitin ligase (E3); physically associates with Ecm5p and Rpd3p; along with Ecm5p, recruits Rpd3p to small number of promoters; colocalizes with Ecm5p, independently of Rpd3p, to promoters of stress response genes upon oxidative stress; involved in ubiquitination, degradation of excess histones; interacts with Ubc4p; role in regulating genes encoding amine transporters; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087562"}


id: PBO:0049460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYG2 antisense RNA 1","termid":"PBO:0049460"}


id: GO:1901359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tungstate.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tungstate binding","termid":"GO:1901359"}


id: PBO:0056796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional ROCO family signaling regulator 1","termid":"PBO:0056796"}


id: PBO:0003630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, involved in endocytic trafficking (predicted)","termid":"PBO:0003630"}


id: PBO:0075871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 1","termid":"PBO:0075871"}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN","EC:4.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["RHEA:23368","UM-BBD_reactionID:r1049"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: PBO:0018157
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspers-Huttenlocher Syndrome","termid":"PBO:0018157"}


id: PBO:0041048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 4","termid":"PBO:0041048"}


id: PBO:0052397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C3","termid":"PBO:0052397"}


id: GO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"part_of","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"long-term strengthening of neuromuscular junction","termid":"GO:0042062"}


id: PBO:0005655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm7 (predicted)","termid":"PBO:0005655"}


id: PBO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 37","termid":"PBO:0060136"}


id: MOD:01714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01714"}


id: PBO:0091138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human C6orf136 ortholog","termid":"PBO:0091138"}


id: PBO:0038801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 7","termid":"PBO:0038801"}


id: PBO:0053039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1B","termid":"PBO:0053039"}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["EC:1.1.1.220","MetaCyc:1.1.1.220-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: PBO:0069782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1067, pseudogene","termid":"PBO:0069782"}


id: PATO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light blue","termid":"PATO:0001243"}


id: PBO:0111777
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0111777"}


id: PBO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase","termid":"PBO:0034786"}


id: GO:0014916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung blood pressure","synonyms":[{"name":"regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0014916"}


id: PBO:0078352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 18-1","termid":"PBO:0078352"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:21370995","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: PBO:0049818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC9 antisense RNA 1","termid":"PBO:0049818"}


id: PBO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H3","termid":"PBO:0050426"}


id: PBO:0059122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 2","termid":"PBO:0059122"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: PBO:0075043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-6","termid":"PBO:0075043"}


id: PR:O14332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-A2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin rem1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.17c","secondary_identifiers":["UniProtKB:O14332"],"synonyms":[{"name":"Spom972h-CCNA2","type":"exact"}],"termid":"PR:O14332"}


id: GO:0046578
data:
  {"annotated_genes":["SJAG_02379","SJAG_00329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00329":null,"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046578","terms_by_termid":{"GO:0046579":null,"GO:0046580":null}}


id: GO:0008236
data:
  {"annotated_genes":["SJAG_00975","SJAG_01285","SJAG_03121","SJAG_03910","SJAG_00984","SJAG_03648","SJAG_03261","SJAG_01136","SJAG_04398","SJAG_05286","SJAG_00737","SJAG_04928","SJAG_02565","SJAG_01868","SJAG_04785","SJAG_02809","SJAG_02432","SJAG_04819","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85316],"is_not":false,"summary":null,"term":"GO:0008236"},{"annotations":[87964,84403,100513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[114514,93778,105330,109541,97417,99956,99208,90297,83677,89409,100958,99950,87752,89319,104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[97418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"serine hydrolase activity","termid":"GO:0017171"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0008233","GO:0140096"],"is_obsolete":false,"name":"serine-type peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3132753","Reactome:R-HSA-9839110","Reactome:R-HSA-9839072","Reactome:R-HSA-6801766","Reactome:R-HSA-2022383","Reactome:R-HSA-1461993"],"synonyms":[{"name":"serine protease activity","type":"narrow"}],"termid":"GO:0008236","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null}}


id: PBO:0063961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2","termid":"PBO:0063961"}


id: PBO:0048463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase","termid":"PBO:0048463"}


id: PR:Q10295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A poly(A) polymerase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase pla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.04","secondary_identifiers":["UniProtKB:Q10295"],"synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAPOLB","type":"exact"},{"name":"polynucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10295"}


id: PBO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion library version 2. has incorrect strain","termid":"PBO:0011111"}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0048661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 3","termid":"PBO:0048661"}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: PBO:0049391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 4","termid":"PBO:0049391"}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: PBO:0043948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A4","termid":"PBO:0043948"}


id: PBO:0028390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glyoxalase_III_activity","termid":"PBO:0028390"}


id: FYPO:0002357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"protein-RNA interaction phenotype","termid":"FYPO:0002131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0002131"],"is_obsolete":false,"name":"normal protein-RNA interaction","synonyms":[{"name":"normal RNA binding","type":"exact"},{"name":"normal RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002357"}


id: PBO:0068418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase","termid":"PBO:0068418"}


id: GO:1903105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:19853560","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903105)","synonyms":[{"name":"down regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"down regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"down regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"down regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"down-regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"down-regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"down-regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"down-regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"downregulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"downregulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"downregulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"downregulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"inhibition of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signaling pathway involved in determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"inhibition of insulin receptor signalling pathway of determination of adult lifespan","type":"narrow"},{"name":"negative regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"negative regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"negative regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903105"}


id: PBO:0050718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 4","termid":"PBO:0050718"}


id: PBO:0055704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 3","termid":"PBO:0055704"}


id: FYPO:0001103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydrogen peroxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hydrogen peroxide","synonyms":[{"name":"resistance to H2O2","type":"exact"},{"name":"resistance to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistant to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001103"}


id: GO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FACT complex.","definition_xrefs":["PMID:10682845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FACT complex binding","termid":"GO:0062059"}


id: PBO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein Moa1","termid":"PBO:0002201"}


id: GO:0097234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an epidermal lamellar body, a specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body membrane","termid":"GO:0097232"},{"relation_name":"part_of","term_name":"epidermal lamellar body","termid":"GO:0097209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"epidermal lamellar body membrane","termid":"GO:0097234"}


id: PBO:0078820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-3","termid":"PBO:0078820"}


id: PBO:0051626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN antisense RNA 1","termid":"PBO:0051626"}


id: PBO:0079820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 2","termid":"PBO:0079820"}


id: PBO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 5","termid":"PBO:0050227"}


id: PATO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000917 relative thickness (obsolete PATO:0000917)","termid":"PATO:0000917"}


id: GO:2000729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in ureter development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in ureter development","termid":"GO:0072199"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"positive regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"positive regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:2000729"}


id: GO:0070199
data:
  {"annotated_genes":["SJAG_03540","SJAG_01297","SJAG_02336","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114738,100034,96514,104396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: PBO:0084075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; regulated by the GTPase-activating protein, Cin2p, the human retinitis pigmentosa 2 (RP2) homolog","termid":"PBO:0084075"}


id: PBO:0030627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_nitrogen_starvation","termid":"PBO:0030627"}


id: FYPO:0002155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: PBO:0057428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-1","termid":"PBO:0057428"}


id: PBO:0057371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548am","termid":"PBO:0057371"}


id: PBO:0017727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0017727"}


id: PBO:0077857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 2","termid":"PBO:0077857"}


id: GO:0039654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.","definition_xrefs":["VZ:992","GOC:bf","UniProtKB-KW:KW-1170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fusion involved in viral entry into host cell","termid":"GO:0039663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host endosome membrane","secondary_identifiers":["GO:0075501","GO:0075517"],"synonyms":[{"name":"fusion of virus membrane with host endosomal membrane","type":"exact"},{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via caveolin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with host endosome","type":"related"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with the endosome membrane","type":"related"},{"name":"viral penetration via endocytosis followed by caveolae-mediated membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral penetration via endocytosis followed by clathrin-mediated membrane fusion with the endosome membrane","type":"narrow"}],"termid":"GO:0039654"}


id: PBO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Rxt2","termid":"PBO:0003196"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: PR:Q9US00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US00"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.14","synonyms":[{"name":"Spom972h-amt2","type":"exact"}],"termid":"PR:Q9US00"}


id: GO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin E","termid":"GO:0034695"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin E stimulus","termid":"GO:0071380"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: PATO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemon-shaped","termid":"PATO:0002345"}


id: GO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","secondary_identifiers":["GO:0048004"],"synonyms":[{"name":"antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0019885"}


id: PBO:0045818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 8","termid":"PBO:0045818"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: PR:Q9P7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.18 gene.","definition_xrefs":["UniProtKB:Q9P7I8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0390 protein C24B10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.18","synonyms":[{"name":"Spom972h-SPCC24B10.18","type":"exact"}],"termid":"PR:Q9P7I8"}


id: SO:1001261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a mature mRNA transcript, modified before translation or during translation, usually by special cis-acting signals.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded","termid":"SO:0000881"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_mRNA","synonyms":[{"name":"recoded mRNA","type":"exact"}],"termid":"SO:1001261"}


id: PBO:0087530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain","termid":"PBO:0087530"}


id: PBO:0055715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 1","termid":"PBO:0055715"}


id: PBO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 2","termid":"PBO:0071670"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: PBO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png3 (predicted)","termid":"PBO:0002095"}


id: PBO:0051276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-6","termid":"PBO:0051276"}


id: GO:0032267
data:
  {"annotated_genes":["SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84461],"is_not":false,"summary":null,"term":"GO:0032267"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of lysine onto the cytidine residue present at the wobble position (usually position 34) of an AUA-specific isoleucine tRNA, to form the derivative lysidine. This modification converts both the codon specificity of tRNA(Ile) from AUG to AUA and its amino acid specificity from methionine to isoleucine.","definition_xrefs":["PMID:14527414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016874","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.4.-"],"synonyms":[{"name":"tRNA(Ile)-2-lysyl-cytidine synthase activity","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase activity","type":"exact"}],"termid":"GO:0032267","terms_by_termid":{"GO:0032267":null}}


id: PBO:0090242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Urm1","termid":"PBO:0090242"}


id: GO:0050602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + NADPH + H+ + 7-O-methylluteone = H2O + NADP+ + dihydrofurano derivatives.","definition_xrefs":["MetaCyc:1.14.99.34-RXN","EC:1.14.99.34"],"gene_count":0,"genotype_count":0,"name":"obsolete monoprenyl isoflavone epoxidase activity (obsolete GO:0050602)","synonyms":[{"name":"7-O-methylluteone,NADPH:O2 oxidoreductase activity","type":"related"},{"name":"7-O-methylluteone:O2 oxidoreductase activity","type":"related"},{"name":"monoprenyl isoflavone monooxygenase activity","type":"related"}],"termid":"GO:0050602"}


id: PBO:0063995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 29","termid":"PBO:0063995"}


id: GO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in).","definition_xrefs":["PMID:15060041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0022857","GO:0003824","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity","termid":"GO:0090588"}


id: PBO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type zinc finger","termid":"PBO:0004120"}


id: PBO:0079423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 6","termid":"PBO:0079423"}


id: PR:O42890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao2 gene.","definition_xrefs":["UniProtKB:O42890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein cao2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.16c","synonyms":[{"name":"Spom972h-cao2","type":"exact"}],"termid":"PR:O42890"}


id: GO:1902733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte differentiation","termid":"GO:1902733"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: PBO:0063152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator","termid":"PBO:0063152"}


id: SO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 2.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000846 RNApol_III_promoter_type_2_region (obsolete SO:0000846)","termid":"SO:0000846"}


id: PBO:0055140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2559","termid":"PBO:0055140"}


id: GO:0047955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + glycerol = AH(2) + glycerone.","definition_xrefs":["RHEA:17493","EC:1.1.99.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycerol dehydrogenase (acceptor) activity","secondary_identifiers":["KEGG_REACTION:R01045","MetaCyc:GLYCEROL-DEHYDROGENASE-ACCEPTOR-RXN"],"synonyms":[{"name":"glycerol:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"glycerol:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047955"}


id: FYPO:0003871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal when the cell is in G0 phase. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","PMID:20133687","GO:0006325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization during G0","synonyms":[{"name":"abnormal chromatin organisation during G0","type":"exact"},{"name":"abnormal chromatin organization during cell quiescence","type":"exact"},{"name":"abnormal chromatin organization during quiescence","type":"exact"}],"termid":"FYPO:0003871"}


id: GO:0140043
data:
  {"annotated_genes":["SJAG_00405","SJAG_02736"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99052,113036],"is_not":false,"summary":null,"term":"GO:0140043"}]},"cv_name":"biological_process","definition":"Any process in which a lipid droplet is transported to, or maintained to the prospore membrane leading edge.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_02736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid droplet localization to prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome localization to FSM membrane leading edge","type":"exact"},{"name":"adiposome localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"adiposome localization to forespore membrane leading edge","type":"related"},{"name":"lipid body localization to FSM membrane leading edge","type":"exact"},{"name":"lipid body localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid body localization to forespore membrane leading edge","type":"related"},{"name":"lipid particle localization to FSM membrane leading edge","type":"exact"},{"name":"lipid particle localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid particle localization to forespore membrane leading edge","type":"related"}],"termid":"GO:0140043","terms_by_termid":{"GO:0140043":null}}


id: PBO:0043853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular retinoic acid binding protein 2","termid":"PBO:0043853"}


id: PBO:0067346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 443, pseudogene","termid":"PBO:0067346"}


id: PBO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_message_for_curators","termid":"PBO:0034032"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: MOD:01102
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00504. Remap to MOD:00504.","definition_xrefs":["DeltaMass:348"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01102 myristoylation-4H (two double bonds) (obsolete MOD:01102)","termid":"MOD:01102"}


id: PBO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1","termid":"PBO:0061535"}


id: GO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of glutamine family amino acid metabolic process","synonyms":[{"name":"regulation of glutamine family amino acid metabolism","type":"exact"}],"termid":"GO:0000820"}


id: GO:1904472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelin production.","definition_xrefs":["PMID:15560120","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of endothelin production","termid":"GO:1904470"},{"relation_name":"positively_regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelin production","synonyms":[{"name":"activation of EDN1 secretion","type":"narrow"},{"name":"activation of EDN2 secretion","type":"narrow"},{"name":"activation of EDN3 secretion","type":"narrow"},{"name":"activation of endothelin secretion","type":"narrow"},{"name":"activation of endothelin-1 secretion","type":"narrow"},{"name":"activation of endothelin-2 secretion","type":"narrow"},{"name":"activation of endothelin-3 secretion","type":"narrow"},{"name":"positive regulation of EDN1 secretion","type":"narrow"},{"name":"positive regulation of EDN2 secretion","type":"narrow"},{"name":"positive regulation of EDN3 secretion","type":"narrow"},{"name":"positive regulation of endothelin secretion","type":"narrow"},{"name":"positive regulation of endothelin-1 secretion","type":"narrow"},{"name":"positive regulation of endothelin-2 secretion","type":"narrow"},{"name":"positive regulation of endothelin-3 secretion","type":"narrow"},{"name":"up regulation of EDN1 secretion","type":"narrow"},{"name":"up regulation of EDN2 secretion","type":"narrow"},{"name":"up regulation of EDN3 secretion","type":"narrow"},{"name":"up regulation of endothelin secretion","type":"exact"},{"name":"up regulation of endothelin-1 secretion","type":"narrow"},{"name":"up regulation of endothelin-2 secretion","type":"narrow"},{"name":"up regulation of endothelin-3 secretion","type":"narrow"},{"name":"up-regulation of EDN1 secretion","type":"narrow"},{"name":"up-regulation of EDN2 secretion","type":"narrow"},{"name":"up-regulation of EDN3 secretion","type":"narrow"},{"name":"up-regulation of endothelin secretion","type":"exact"},{"name":"up-regulation of endothelin-1 secretion","type":"narrow"},{"name":"up-regulation of endothelin-2 secretion","type":"narrow"},{"name":"up-regulation of endothelin-3 secretion","type":"narrow"},{"name":"upregulation of EDN1 secretion","type":"narrow"},{"name":"upregulation of EDN2 secretion","type":"narrow"},{"name":"upregulation of EDN3 secretion","type":"narrow"},{"name":"upregulation of endothelin secretion","type":"exact"},{"name":"upregulation of endothelin-1 secretion","type":"narrow"},{"name":"upregulation of endothelin-2 secretion","type":"narrow"},{"name":"upregulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904472"}


id: GO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"swim bladder morphogenesis","termid":"GO:0048795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder formation","synonyms":[{"name":"gas bladder biosynthesis","type":"exact"},{"name":"gas bladder formation","type":"exact"}],"termid":"GO:0048797"}


id: FYPO:0002608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal during a cellular response to hydroxyurea. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"increased histone H2A phosphorylation during cellular response to HU","type":"exact"},{"name":"increased histone H2A phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002608"}


id: GO:0044390
data:
  {"annotated_genes":["SJAG_00033","SJAG_01533","SJAG_00435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73204,73318,76321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031624"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin-like protein conjugating enzyme such as ubiquitin conjugating enzyme.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00435":null,"SJAG_01533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ubiquitin-like protein conjugating enzyme binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"E2 protein ligase binding","type":"exact"},{"name":"small protein conjugating enzyme binding","type":"exact"}],"termid":"GO:0044390","terms_by_termid":{"GO:0031624":null}}


id: PBO:0074886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63B","termid":"PBO:0074886"}


id: PBO:0089979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal conserved protein YML020W protein ortholog, PTHR47349 family","termid":"PBO:0089979"}


id: PBO:0086573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7","termid":"PBO:0086573"}


id: GO:0102699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2-methylpropionitrile + O2 + NADPH = 2-hydroxy-2-methylpropanenitrile + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-methylpropionitrile hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-5082","RHEA:51964"],"termid":"GO:0102699"}


id: PBO:0073523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3BP5 antisense RNA 1","termid":"PBO:0073523"}


id: PATO:0001813
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lack elastic tension that facilitate response to stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonicity","termid":"PATO:0001439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonicity","termid":"PATO:0001813"}


id: GO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic phospholipase A2 activity (obsolete GO:0004626)","synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004626"}


id: GO:0036522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25063865","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host protein localization to phagocytic vesicle","termid":"GO:0036521"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to phagocytic vesicle","termid":"GO:1905170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by symbiont of host protein localization to phagocytic vesicle","synonyms":[{"name":"disruption of host protein localisation to phagosome","type":"exact"},{"name":"inhibition of host protein localisation to phagosome","type":"exact"},{"name":"suppression of host protein localisation to phagosome","type":"exact"}],"termid":"GO:0036522"}


id: PBO:0069440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 705, pseudogene","termid":"PBO:0069440"}


id: PBO:0059274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 3","termid":"PBO:0059274"}


id: PBO:0089021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6","termid":"PBO:0089021"}


id: PBO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 5","termid":"PBO:0045872"}


id: PR:P87147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nascent polypeptide-associated complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.05","secondary_identifiers":["UniProtKB:P87147"],"synonyms":[{"name":"NAC-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NACA2","type":"exact"},{"name":"alpha-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87147"}


id: PBO:0073866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 2","termid":"PBO:0073866"}


id: PBO:0043999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal Src kinase","termid":"PBO:0043999"}


id: PBO:0075176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 6","termid":"PBO:0075176"}


id: PBO:0082122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; responsible for incorporation of N4-acetylcytidine into mRNAs; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance; essential gene; NAT10, the human homolog, implicated in several types of cancer and premature aging","termid":"PBO:0082122"}


id: PBO:0046731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVX1 antisense RNA","termid":"PBO:0046731"}


id: MOD:00513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) HexNAc","definition_xrefs":["PubMed:1694179","PubMed:111247","PubMed:5490222","RESID:AA0151#var","Unimod:145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"HexNAc1dHex2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(2)","type":"related"},{"name":"HexNAc1dHex2","type":"related"}],"termid":"MOD:00513"}


id: GO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that contains the serum response factor (SRF) and the basic helix-loop-helix proteins myogenin and E12, and is involved in activating transcription of muscle-specific genes.","definition_xrefs":["PMID:8617811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SRF-myogenin-E12 complex","termid":"GO:0070514"}


id: PBO:0089530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2","termid":"PBO:0089530"}


id: GO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + phosphate = beta-L-galactose-1-phosphate + GDP.","definition_xrefs":["RHEA:27698","PMID:17462988","PMID:18463094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"GDP-L-galactose phosphorylase activity","secondary_identifiers":["EC:2.7.7.69","GO:0010475","MetaCyc:RXNQT-4141"],"synonyms":[{"name":"GDP:galactose-1-phosphate guanyltransferase activity","type":"exact"},{"name":"galactose-1-phosphate guanylyltransferase (GDP) activity","type":"exact"}],"termid":"GO:0080047"}


id: PBO:0057725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-9 host gene","termid":"PBO:0057725"}


id: PBO:0110395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL1 pseudogene 1","termid":"PBO:0110395"}


id: PBO:0063391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6 divergent transcript","termid":"PBO:0063391"}


id: PBO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2226","termid":"PBO:0054813"}


id: PBO:0075097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 146","termid":"PBO:0075097"}


id: PBO:0086778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDL241W is not an essential gene","termid":"PBO:0086778"}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: PBO:0077521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 236","termid":"PBO:0077521"}


id: PBO:0038316
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_added_date","termid":"PBO:0038316"}


id: PBO:0056151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACC1 antisense RNA 1","termid":"PBO:0056151"}


id: PBO:0062304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 1 pseudogene","termid":"PBO:0062304"}


id: PBO:0056686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 6","termid":"PBO:0056686"}


id: FYPO:0001641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular tyrosine level","synonyms":[{"name":"normal cellular L-tyrosine level","type":"exact"},{"name":"normal cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal cellular tyrosine level during vegetative growth","type":"exact"},{"name":"normal level of tyrosine in cell","type":"exact"}],"termid":"FYPO:0001641"}


id: PBO:0031429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glycerol_dehydrogenase_activity","termid":"PBO:0031429"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: PBO:0062012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 1 pseudogene","termid":"PBO:0062012"}


id: PR:O60148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.18c gene.","definition_xrefs":["UniProtKB:O60148","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18H10.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.18c","synonyms":[{"name":"Spom972h-SPBC18H10.18c","type":"exact"}],"termid":"PR:O60148"}


id: PBO:0063031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein interacting protein 2","termid":"PBO:0063031"}


id: PBO:0068778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 15, pseudogene","termid":"PBO:0068778"}


id: PBO:0063372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1 like","termid":"PBO:0063372"}


id: GO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendrite are generated and organized.","definition_xrefs":["ISBN:0198506732","GOC:bc","GOC:aruk","PMID:22683681","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite morphogenesis","termid":"GO:0048813"}


id: GO:0010339
data:
  {"annotated_genes":["SJAG_01975","SJAG_00239","SJAG_04720","SJAG_04864","SJAG_04723"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84881,88637,88638,96928,96929,112069,112070],"is_not":false,"summary":null,"term":"GO:0010339"},{"annotations":[102982,97770,98846,99101,99102,97771,97191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070263"}]},"cv_name":"cellular_component","definition":"The side of the cell wall that is opposite to the side that faces the cell and its contents.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_01975":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0009986","GO:0005618","GO:0005575"],"is_obsolete":false,"name":"external side of cell wall","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010339","terms_by_termid":{"GO:0010339":null,"GO:0070263":null}}


id: PBO:0076242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 3","termid":"PBO:0076242"}


id: PBO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Z","termid":"PBO:0043848"}


id: PBO:0059634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCL1 pseudogene 1","termid":"PBO:0059634"}


id: PBO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic G1 APC coactivator Srw1/Ste9","termid":"PBO:0033820"}


id: RO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has direct input c iff c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_direct_input","termid":"RO:0002400"}


id: GO:0021608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","ISBN:0838580343","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve formation","synonyms":[{"name":"CN XI biosynthesis","type":"related"},{"name":"CN XI formation","type":"related"}],"termid":"GO:0021608"}


id: PBO:0069957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1250, pseudogene","termid":"PBO:0069957"}


id: PBO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member A","termid":"PBO:0047245"}


id: GO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the prostate gland where the increase in size or mass has the specific outcome of the progression of the gland, from its formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland growth","termid":"GO:0060736"}


id: SO:1000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000127 sequence_variant_causing_compensatory_transcript_secondary_structure_mutation (obsolete SO:1000127)","synonyms":[{"name":"mutation causing compensatory transcript secondary structure mutation","type":"related"},{"name":"sequence variant causing compensatory transcript secondary structure mutation","type":"exact"}],"termid":"SO:1000127"}


id: PR:Q9P3A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp8 gene.","definition_xrefs":["UniProtKB:Q9P3A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1565.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.05","synonyms":[{"name":"Spom972h-utp8","type":"exact"}],"termid":"PR:Q9P3A9"}


id: GO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Na+(in) + Mg2+(out) = Na+(out) + Mg2+(in).","definition_xrefs":["GOC:PARL","PMID:22031603","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"magnesium ion transmembrane transporter activity","termid":"GO:0015095"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"magnesium:sodium antiporter activity","termid":"GO:0061768"}


id: GO:1905571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-10 (IL-10) and that consists of, at a minimum, a dimeric interleukin, an alpha and a beta chain as well as optional additional kinase subunits. The alpha chain binds IL-10 with high affinity and subsequently binds the common beta receptor chain that forms part of multiple interleukin receptors.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:16982608","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-10 receptor complex","synonyms":[{"name":"IL-10 receptor complex","type":"exact"},{"name":"IL-10-receptor complex","type":"exact"},{"name":"IL10 receptor complex","type":"exact"},{"name":"interleukin-10-receptor complex","type":"exact"}],"termid":"GO:1905571"}


id: GO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-naphthaldehyde + NAD+ + H2O = 1-naphthoic acid + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-naphthaldehyde dehydrogenase activity","termid":"GO:0034525"}


id: PBO:0054433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1829","termid":"PBO:0054433"}


id: GO:0032469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"endoplasmic reticulum calcium ion homeostasis","synonyms":[{"name":"ER calcium ion concentration regulation","type":"exact"},{"name":"ER calcium ion homeostasis","type":"exact"},{"name":"calcium ion homeostasis in ER","type":"exact"},{"name":"calcium ion homeostasis in endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration regulation","type":"exact"},{"name":"regulation of ER calcium ion concentration","type":"exact"},{"name":"regulation of calcium ion concentration in ER","type":"exact"},{"name":"regulation of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"regulation of endoplasmic reticulum calcium ion concentration","type":"exact"}],"termid":"GO:0032469"}


id: PBO:0055257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2684","termid":"PBO:0055257"}


id: PBO:0014244
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpressed in BFA Resistant strains","termid":"PBO:0014244"}


id: GO:1901682
data:
  {"annotated_genes":["SJAG_03652","SJAG_01941","SJAG_00835","SJAG_01890","SJAG_04325","SJAG_01589","SJAG_02463","SJAG_02779","SJAG_04295","SJAG_04673","SJAG_03577","SJAG_03334","SJAG_02780","SJAG_01660","SJAG_00671","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[70826,88208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[109823,115074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[91669,109267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[96802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[84464,98732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000095"},{"annotations":[106259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[84611,96472,112737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015116"},{"annotations":[99772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[86324,86325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"},{"annotations":[84612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015117"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sulfur compound from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sulfur compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulfur molecular entity transmembrane transporter activity","type":"exact"}],"termid":"GO:1901682","terms_by_termid":{"GO:0000095":null,"GO:0008271":null,"GO:0008521":null,"GO:0015116":null,"GO:0015117":null,"GO:0015225":null,"GO:0015234":null,"GO:0033229":null,"GO:0034216":null,"GO:0034634":null,"GO:0046964":null,"GO:0090422":null,"GO:1902557":null}}


id: PBO:0084804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084804"}


id: PBO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 3","termid":"PBO:0050379"}


id: GO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal tissues.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal tolerance induction","termid":"GO:0002427"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: PBO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-36 (pseudogene)","termid":"PBO:0051348"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: PBO:0064607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 1","termid":"PBO:0064607"}


id: PR:Q1MTR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar import and degradation protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.14c","synonyms":[{"name":"Spom972h-SPBC1685.14c","type":"exact"}],"termid":"PR:Q1MTR3"}


id: PBO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_vegetative_growth","termid":"PBO:0031781"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: GO:0097201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:18086556","PMID:18627600","GOC:rn","PMID:11027285","PMID:15575969","PMID:16556235"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: FYPO:0005937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late replication origins is decreased.","definition_xrefs":["PMID:24656819","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at replication origin","termid":"FYPO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at late replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at late origin","type":"exact"},{"name":"decreased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at late replication origin","type":"exact"}],"termid":"FYPO:0005937"}


id: PBO:0077148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase like 1","termid":"PBO:0077148"}


id: RO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'regulates in other organism' y if and only if: (x is the realization of a function to exert an effect on the frequency, rate or extent of y) AND (the agents of x are produced by organism o1 and the agents of y are produced by organism o2).","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_in_other_organism","termid":"RO:0002010"}


id: GO:0048708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte differentiation","termid":"GO:0048708"}


id: PBO:0005181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a","termid":"PBO:0005181"}


id: GO:0099606
data:
  {"annotated_genes":["SJAG_04745","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90906,106042],"is_not":false,"summary":null,"term":"GO:0099606"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules. This process is part of mitotic metaphase plate congression.","definition_xrefs":["GOC:dos","PMID:26258632","PMID:26705896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04745":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"microtubule plus-end directed mitotic chromosome migration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plus-end directed chromosome gliding","type":"exact"}],"termid":"GO:0099606","terms_by_termid":{"GO:0099606":null}}


id: GO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"positively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of phagocytosis","synonyms":[{"name":"activation of phagocytosis","type":"narrow"},{"name":"stimulation of phagocytosis","type":"narrow"},{"name":"up regulation of phagocytosis","type":"exact"},{"name":"up-regulation of phagocytosis","type":"exact"},{"name":"upregulation of phagocytosis","type":"exact"}],"termid":"GO:0050766"}


id: PBO:0083960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General splicing factor; required for stable U2 snRNP binding to primary transcripts; essential for the first step of splicing; component of the pre-catalytic spliceosome complex containing Cef1p; similar to S. pombe Cwf24p","termid":"PBO:0083960"}


id: FYPO:0003151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to heat","synonyms":[{"name":"decreased protein accumulation during cellular response to heat","type":"related"},{"name":"decreased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to heat","type":"exact"},{"name":"thermo-sensitive","type":"related"},{"name":"thermosensitive","type":"related"}],"termid":"FYPO:0003151"}


id: PATO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongy","termid":"PATO:0001480"}


id: GO:0039581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by binding to double-stranded RNA (dsRNA). Binding of viral proteins to RNA may sequester or alter the RNA so it can not be recognized by host PKR, or may compete with PKR for dsRNA binding.","definition_xrefs":["PMID:7514679"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host PKR activity via double-stranded RNA binding (obsolete GO:0039581)","synonyms":[{"name":"suppression by virus of host PKR activity by binding to dsRNA","type":"exact"}],"termid":"GO:0039581"}


id: PBO:0069680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 957, pseudogene","termid":"PBO:0069680"}


id: PBO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member B","termid":"PBO:0046934"}


id: PBO:0056625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 6 pseudogene 1","termid":"PBO:0056625"}


id: PBO:0060927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFAT activating protein with ITAM motif 1","termid":"PBO:0060927"}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: GO:1904992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["PMID:26554819","GOC:kmv","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"positive regulation of dopamine receptor signaling pathway","termid":"GO:0060161"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"positive regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"upregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904992"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: PR:O60057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug147 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 147 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.06","synonyms":[{"name":"Spom972h-mug147","type":"exact"}],"termid":"PR:O60057"}


id: GO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin-glucuronoside = bilirubin + bilirubin-bisglucuronoside.","definition_xrefs":["RHEA:16885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bilirubin-glucuronoside glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00062"],"synonyms":[{"name":"bilirubin glucuronoside glucuronosyltransferase activity","type":"exact"},{"name":"bilirubin monoglucuronide transglucuronidase activity","type":"exact"},{"name":"bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0047278"}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11080161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: PBO:0082775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU and 90S preribosomes; involved in pre-18S rRNA processing; binds to U3 snoRNA and Mpp10p; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock","termid":"PBO:0082775"}


id: PBO:0079939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH1 protein network component harmonin","termid":"PBO:0079939"}


id: SO:1000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of an adenine to a guanine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_G_transition","synonyms":[{"name":"A to G transition","type":"exact"}],"termid":"SO:1000015"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_02780","SJAG_03497","SJAG_01890","SJAG_01344","SJAG_00835","SJAG_01589","SJAG_03334","SJAG_00671","SJAG_04325","SJAG_01941","SJAG_05213","SJAG_00991","SJAG_02779","SJAG_04673","SJAG_02463","SJAG_03652","SJAG_03577","SJAG_04295","SJAG_02962","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[88206,70829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[115073,109822,62985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[91666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[93194,114269,92210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[97479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[84463,98731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[84607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[99771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[89466],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[68487,63713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901962"},{"annotations":[96471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[63910,64945,112736,61258,106258,64944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[96800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[96801,86317,86316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0034775":null,"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1901962":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null}}


id: PATO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having mistakenly taken course, way, or passage; ill-routed.","definition_xrefs":["NDI:NDI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misrouted","termid":"PATO:0000629"}


id: GO:0047935
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114518],"is_not":false,"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + NADP+ = D-glucono-1,5-lactone + NADPH.","definition_xrefs":["EC:1.1.1.119","MetaCyc:GLUCOSE-1-DEHYDROGENASE-NADP+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14405"],"synonyms":[{"name":"D-glucose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-dependent glucose dehydrogenase activity","type":"related"},{"name":"NADP-linked aldohexose dehydrogenase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate-linked aldohexose dehydrogenase activity","type":"related"}],"termid":"GO:0047935","terms_by_termid":{"GO:0047935":null}}


id: PBO:0110198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1","termid":"PBO:0110198"}


id: PBO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tyrosine_import","termid":"PBO:0031158"}


id: GO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002744","GO:0002741"],"synonyms":[{"name":"activation of cytokine production during immune response","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"positive regulation of cytokine production during immune response","type":"related"},{"name":"positive regulation of cytokine secretion involved in immune response","type":"narrow"},{"name":"stimulation of cytokine production during immune response","type":"narrow"},{"name":"up regulation of cytokine production during immune response","type":"related"},{"name":"up-regulation of cytokine production during immune response","type":"related"},{"name":"upregulation of cytokine production during immune response","type":"related"}],"termid":"GO:0002720"}


id: SO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U12 small nuclear (snRNA), together with U4atac/U6atac, U5, and U11 snRNAs and associated proteins, forms a spliceosome that cleaves a divergent class of low-abundance pre-mRNA introns.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U12_snRNA"],"synonyms":[{"name":"U12 small nuclear RNA","type":"exact"},{"name":"U12 snRNA","type":"exact"},{"name":"small nuclear RNA U12","type":"exact"},{"name":"snRNA U12","type":"exact"}],"termid":"SO:0000399"}


id: PBO:0011442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc3","termid":"PBO:0011442"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["GOC:mah","PMID:7878057","PMID:9126736","GOC:isa_complete","PMID:14570049"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated modulation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: GO:0097530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a granulocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:24193336","PMID:24163421","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte migration","termid":"GO:0097530"}


id: PBO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 1","termid":"PBO:0072684"}


id: PR:Q9P781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.09c gene.","definition_xrefs":["UniProtKB:Q9P781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.09c","synonyms":[{"name":"Spom972h-SPBC1711.09c","type":"exact"}],"termid":"PR:Q9P781"}


id: PBO:0088457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body component, Nst1","termid":"PBO:0088457"}


id: MOD:00361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an S-adenosylmethionine and a four-iron four-sulfur cluster to tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:14704425","PubMed:11222759","RESID:AA0356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S-S-AdoMet)","type":"exact"},{"name":"tetra-mu3-sulfido(S-adenosylmethion-N,O-diyliron)tris(S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00361"}


id: PBO:0081419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 275","termid":"PBO:0081419"}


id: PBO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O3B","termid":"PBO:0047823"}


id: PBO:0069749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1031, pseudogene","termid":"PBO:0069749"}


id: PR:Q9C106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01373","PANTHER:PTHR12949:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.03","secondary_identifiers":["UniProtKB:Q9C106"],"synonyms":[{"name":"RNA polymerase III subunit C3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C82 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3C","type":"exact"}],"termid":"PR:Q9C106"}


id: GO:0180006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 2) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0004721","GO:0003824","GO:0016787","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S2 phosphatase activity","type":"exact"}],"termid":"GO:0180006"}


id: PBO:0055205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2630","termid":"PBO:0055205"}


id: FYPO:0003543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites","synonyms":[{"name":"accumulation of DNA damage foci","type":"related"},{"name":"accumulation of double-strand break sites","type":"exact"},{"name":"increased number of DNA damage foci","type":"related"}],"termid":"FYPO:0003543"}


id: GO:0008384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein.","definition_xrefs":["EC:2.7.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0004672","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"IkappaB kinase activity","secondary_identifiers":["MetaCyc:2.7.11.10-RXN","Reactome:R-HSA-5684267","RHEA:19073","Reactome:R-HSA-5684275"],"synonyms":[{"name":"ATP:IkappaB protein phosphotransferase activity","type":"related"},{"name":"CHUK","type":"related"},{"name":"IKBKA","type":"related"},{"name":"IKBKB","type":"related"},{"name":"IKK","type":"related"},{"name":"IKK-1","type":"related"},{"name":"IKK-2","type":"related"},{"name":"STK12","type":"related"},{"name":"TANK-binding kinase 1 activity","type":"narrow"},{"name":"TBK1","type":"related"},{"name":"inhibitor of NF-kappaB kinase activity","type":"related"},{"name":"inhibitor of NFkappaB kinase activity","type":"related"}],"termid":"GO:0008384"}


id: GO:0046174
data:
  {"annotated_genes":["SJAG_04048","SJAG_04192","SJAG_04870","SJAG_00244","SJAG_04320","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[112469,89196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[111158,84903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[101166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"polyol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol catabolic process","type":"exact"},{"name":"polyol breakdown","type":"exact"},{"name":"polyol catabolism","type":"exact"},{"name":"polyol degradation","type":"exact"}],"termid":"GO:0046174","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: GO:0045311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a pheromone stimulus.","definition_xrefs":["GOC:dph","GOC:mcc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"},{"relation_name":"part_of","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to pheromone","termid":"GO:0045311"}


id: FYPO:0005158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->6)-beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall beta-glucan level","termid":"FYPO:0001082"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall (1->6)-beta-D-glucan level","synonyms":[{"name":"decreased cell wall (1->6)-beta-D-glucan accumulation","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall (1->6)-beta-D-glucan level","type":"exact"}],"termid":"FYPO:0005158"}


id: GO:0102049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-methionine + ATP(4-) = H+ + indole-3-acetyl-methionine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-methionine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10431"],"termid":"GO:0102049"}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: PBO:0049021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3","termid":"PBO:0049021"}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GOC:TermGenie","PMID:11606552","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: GO:0048834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of petals formed in a flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ number","termid":"GO:0048833"},{"relation_name":"part_of","term_name":"corolla development","termid":"GO:0048465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of petal number","termid":"GO:0048834"}


id: PBO:0077985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 7-1","termid":"PBO:0077985"}


id: PBO:0077528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 242","termid":"PBO:0077528"}


id: PBO:0065722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP1 homolog, endonuclein","termid":"PBO:0065722"}


id: PBO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_catalytic_activity","termid":"PBO:0031537"}


id: PBO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 2 subunit","termid":"PBO:0043073"}


id: GO:0043136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 3-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycerol-3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8955794","MetaCyc:GLYCEROL-1-PHOSPHATASE-RXN"],"termid":"GO:0043136"}


id: GO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the facilitated diffusion of glycerol (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol transmembrane transporter activity","termid":"GO:0015168"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycerol channel activity","secondary_identifiers":["MetaCyc:TRANS-RXN-131","Reactome:R-HSA-432074","Reactome:R-HSA-432049","Reactome:R-HSA-507869","RHEA:29675","Reactome:R-HSA-507871"],"termid":"GO:0015254"}


id: PBO:0063511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1","termid":"PBO:0063511"}


id: PBO:0082916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b reductase and NADH-dependent reductase for Dph3p; required for diphthamide synthesis and tRNA wobble uridine modification; also detected in mitochondria; mutation in conserved NADH binding domain of the human ortholog results in type I methemoglobinemia","termid":"PBO:0082916"}


id: PBO:0074221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 5","termid":"PBO:0074221"}


id: PBO:0076960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3","termid":"PBO:0076960"}


id: GO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a garland nephrocyte. A garland nephrocyte is an insect renal cell that filters hemolymph and forms a ring with other garland nephrocytes around the esophagus. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["CL:0000486","GOC:dph","GOC:sart","GOC:mtg_kidney_jan10","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"garland nephrocyte differentiation","secondary_identifiers":["GO:0007514"],"synonyms":[{"name":"garland cell differentiation","type":"exact"}],"termid":"GO:0061321"}


id: GO:0003975
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99703],"is_not":false,"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.","definition_xrefs":["EC:2.7.8.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446191","MetaCyc:2.7.8.15-RXN","Reactome:R-HSA-4549334","RHEA:13289"],"synonyms":[{"name":"GlcNAc-1-P transferase activity","type":"related"},{"name":"N-acetylglucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-D-N-acetylglucosamine N-acetylglucosamine 1-phosphate transferase activity","type":"related"},{"name":"UDP-GlcNAc:dolichyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichol phosphate N-acetyl-D-glucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamine-1-phosphate transferase activity","type":"exact"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine phosphotransferase activity","type":"related"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"chitobiosylpyrophosphoryldolichol synthase activity","type":"related"},{"name":"dolichol phosphate N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichyl phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"}],"termid":"GO:0003975","terms_by_termid":{"GO:0003975":null}}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: PBO:0070551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 17","termid":"PBO:0070551"}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: PATO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in a population of multiple sexes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sex","termid":"PATO:0001338"}


id: PBO:0014252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1-driven selective elimination factor Iss10","termid":"PBO:0014252"}


id: FYPO:0002073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during a cellular response to copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to nucleus during cellular response to copper ion","synonyms":[{"name":"ectopic protein localization to nucleus during cellular response to copper","type":"exact"},{"name":"nuclear protein accumulation in response to copper","type":"related"},{"name":"protein mislocalised to nucleus during cellular response to copper ion","type":"exact"},{"name":"protein mislocalised to nucleus during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleus during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002073"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: PBO:0045075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP2 antisense RNA 1","termid":"PBO:0045075"}


id: GO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell homeostatic proliferation","synonyms":[{"name":"regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046013"}


id: PBO:0078888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-5","termid":"PBO:0078888"}


id: PATO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature","termid":"PATO:0001701"}


id: PBO:0048208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma1","termid":"PBO:0048208"}


id: PBO:0027905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_mitosis","termid":"PBO:0027905"}


id: GO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-189208","MetaCyc:RXN-22596","Reactome:R-HSA-429613","Reactome:R-HSA-8932955","Reactome:R-HSA-5656356","Reactome:R-HSA-5658163"],"synonyms":[{"name":"sodium/glucose symporter activity","type":"exact"}],"termid":"GO:0005412"}


id: PBO:0084219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase); dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions","termid":"PBO:0084219"}


id: GO:1903246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GO_REF:0000058","GOC:TermGenie","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903246)","synonyms":[{"name":"down regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"down-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"downregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"negative regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903246"}


id: PBO:0040232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 4","termid":"PBO:0040232"}


id: PBO:0038763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3C","termid":"PBO:0038763"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: GO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2).","definition_xrefs":["PMID:1504073","PMID:8566699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formate dehydrogenase complex","termid":"GO:0009326"}


id: PBO:0031302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-auxotrophy","termid":"PBO:0031302"}


id: GO:0102347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: icosanoyl-CoA(4-) + NADP(3-) = trans-2-icosenoyl-CoA(4-) + NADPH(4-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-arachidon-2-enoyl-CoA reductase activity (obsolete GO:0102347)","termid":"GO:0102347"}


id: GO:2000503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of natural killer cell chemotaxis","termid":"GO:2000501"},{"relation_name":"positively_regulates","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell chemotaxis","termid":"GO:2000503"}


id: PBO:0044424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 43","termid":"PBO:0044424"}


id: GO:1904053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:22020285","GOC:pad","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"activation of protein targeting to vacuole involved in autophagy","type":"narrow"},{"name":"up regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"up-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"upregulation of protein targeting to vacuole involved in autophagy","type":"exact"}],"termid":"GO:1904053"}


id: FYPO:0001374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex in spores","termid":"FYPO:0001372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to medial cortex in spores","synonyms":[{"name":"protein localisation to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial ring abolished in spores","type":"exact"}],"termid":"FYPO:0001374"}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: PBO:0057108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 198","termid":"PBO:0057108"}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: PBO:0074443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 44","termid":"PBO:0074443"}


id: PBO:0025492
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile neuronal ceroid lipofuscinosis","termid":"PBO:0025492"}


id: GO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:jh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"negatively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of glycerol transport","termid":"GO:0090373"}


id: PBO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 13","termid":"PBO:0072214"}


id: GO:1901661
data:
  {"annotated_genes":["SJAG_04000","SJAG_01672","SJAG_01668","SJAG_04642","SJAG_01911","SJAG_01820","SJAG_01043","SJAG_01866","SJAG_04568","SJAG_00933","SJAG_01865","SJAG_00459","SJAG_06603","SJAG_00721","SJAG_04223"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85369],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[99083,87967,113192,83907,104299,115657,110984,105412,115658,85805,109877,94526,87972,111330,99368,111973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[104300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[115656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006743"},{"annotations":[111974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinone.","definition_xrefs":["GOC:TermGenie","GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_01911":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinone metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["GO:0042375"],"synonyms":[{"name":"quinone cofactor metabolic process","type":"related"},{"name":"quinone cofactor metabolism","type":"related"},{"name":"quinone metabolism","type":"exact"}],"termid":"GO:1901661","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0032194":null,"GO:1901006":null,"GO:1904775":null}}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: PBO:0078176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-1","termid":"PBO:0078176"}


id: PBO:0072581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 4","termid":"PBO:0072581"}


id: GO:0015732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of prostaglandins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"prostaglandin transport","termid":"GO:0015732"}


id: PBO:0074926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 94","termid":"PBO:0074926"}


id: PBO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Sid1","termid":"PBO:0001270"}


id: GO:0061651
data:
  {"annotated_genes":["SJAG_01251"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89048],"is_not":false,"summary":null,"term":"GO:0061651"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of Atg12 from one protein to another via the reaction X-Atg12 + Y = Y-Atg12 + X, where both the X-Atg12 and Y-Atg12 linkages are thioester bonds between the C-terminal amino acid of Atg12 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01251":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0019787","GO:0140096","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Atg12 conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061651","terms_by_termid":{"GO:0061651":null}}


id: PBO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst4","termid":"PBO:0001402"}


id: GO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery.","definition_xrefs":["GOC:hjd","PMID:20622855","GOC:mr","Wikipedia:XY_sex-determination_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"XY body","termid":"GO:0001741"}


id: GO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoterpenoid metabolic process","synonyms":[{"name":"monoterpenoid metabolism","type":"exact"}],"termid":"GO:0016098"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["OMSSA:112","PubMed:626389","DeltaMass:253","PubMed:8297018","PubMed:8783016","Unimod:31#C","PubMed:11760118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: PBO:0076718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 25","termid":"PBO:0076718"}


id: GO:0097269
data:
  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87973,109878,115653,115654],"is_not":false,"summary":null,"term":"GO:0097269"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-decaprenyl diphosphate.","definition_xrefs":["RHEA:27802","PMID:16262699","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"all-trans-decaprenyl-diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["EC:2.5.1.91","Reactome:R-HSA-2162253"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase activity","type":"exact"},{"name":"2-trans,6-trans-farnesyl diphosphate activity","type":"exact"}],"termid":"GO:0097269","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0097269":null}}


id: GO:0052918
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87281],"is_not":false,"summary":null,"term":"GO:0052918"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->6))-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["RHEA:29539","EC:2.4.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06261","MetaCyc:RXN-5469"],"termid":"GO:0052918","terms_by_termid":{"GO:0052918":null}}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: PBO:0086700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of chromosome V; regulated by inositol/choline","termid":"PBO:0086700"}


id: PBO:0048139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 3","termid":"PBO:0048139"}


id: PBO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0030755"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: GO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen and cuticulin-based cuticle development","termid":"GO:0040002"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development involved in collagen and cuticulin-based cuticle molting cycle","synonyms":[{"name":"collagen and cuticulin-based cuticle development during molting","type":"related"},{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042338"}


id: PBO:0074397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 7","termid":"PBO:0074397"}


id: PBO:0075397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP100 nuclear antigen","termid":"PBO:0075397"}


id: PBO:0063233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 19","termid":"PBO:0063233"}


id: PBO:0080640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87B, pseudogene","termid":"PBO:0080640"}


id: FYPO:0001945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein secretion","synonyms":[{"name":"normal protein secretion during mitotic cell cycle","type":"related"},{"name":"normal protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0001945"}


id: GO:1903344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GO_REF:0000058","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein polyglycylation","termid":"GO:1903344"}


id: GO:0034763
data:
  {"annotated_genes":["SJAG_00296","SJAG_03970","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109491,87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[84286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[84287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane transport","type":"exact"},{"name":"inhibition of transmembrane transport","type":"narrow"},{"name":"negative regulation of membrane transport","type":"exact"}],"termid":"GO:0034763","terms_by_termid":{"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: PBO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YNL102W","termid":"PBO:0002048"}


id: FYPO:0002201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable stubby vegetative cell population (obsolete FYPO:0002201)","synonyms":[{"name":"stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002201"}


id: GO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["Wikipedia:Peptide_hormone","PMID:15134857","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptide hormone","synonyms":[{"name":"response to peptide hormone stimulus","type":"exact"},{"name":"response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0043434"}


id: SO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes out of frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_out_of_frame_polypeptide_N_terminal","synonyms":[{"name":"elongated out of frame N terminal","type":"exact"}],"termid":"SO:0001615"}


id: PBO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ace2","termid":"PBO:0000562"}


id: _global:regulates_o_results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation that applies between a process that regulates cell fate commitment and the cell type that the regulated process results in commitment to.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_commitment_to","secondary_identifiers":["GOREL:0001022"],"synonyms":[{"name":"regulates_o_results_in_commitment_to","type":"exact"}],"termid":"_global:regulates_o_results_in_commitment_to"}


id: PBO:0063801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA1 antisense RNA 1","termid":"PBO:0063801"}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: GO:0008075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor guanylate cyclase activity (obsolete GO:0008075)","synonyms":[{"name":"receptor guanylate cyclase activity","type":"exact"}],"termid":"GO:0008075"}


id: GO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.","definition_xrefs":["MetaCyc:P184-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate catabolic process","termid":"GO:0019619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"protocatechuate catabolic process, meta-cleavage","synonyms":[{"name":"3,4-dihydroxybenzoate catabolic process, meta-cleavage","type":"related"},{"name":"protocatechuate breakdown, meta-cleavage","type":"exact"},{"name":"protocatechuate catabolic process to oxaloacetate and pyruvate","type":"exact"},{"name":"protocatechuate degradation, meta-cleavage","type":"exact"}],"termid":"GO:0019617"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: GO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses nitrite reductase [NAD(P)H] activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrite reductase complex [NAD(P)H]","termid":"GO:0009344"}


id: PBO:0078058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 48","termid":"PBO:0078058"}


id: PBO:0080443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrae development associated","termid":"PBO:0080443"}


id: GO:0010640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010640"}


id: PBO:0080488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 7","termid":"PBO:0080488"}


id: PBO:0054894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2308","termid":"PBO:0054894"}


id: GO:0051942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"down-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"downregulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"inhibition of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"negative regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"negative regulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051942"}


id: GO:0050954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of mechanical stimulus","synonyms":[{"name":"chemi-mechanical coupling","type":"related"},{"name":"mechanosensory perception","type":"exact"},{"name":"perception of mechanical stimulus","type":"exact"}],"termid":"GO:0050954"}


id: PBO:0066342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 4","termid":"PBO:0066342"}


id: PBO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 2","termid":"PBO:0044479"}


id: PBO:0069280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 536, pseudogene","termid":"PBO:0069280"}


id: PBO:0018053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein Enp1 (predicted)","termid":"PBO:0018053"}


id: PBO:0091442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal protein Rrg8","termid":"PBO:0091442"}


id: PBO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3","termid":"PBO:0043521"}


id: PBO:0090147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0090147"}


id: PBO:0065633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 2","termid":"PBO:0065633"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["PMID:21734656","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: GO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branches of the pancreas are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"pancreas morphogenesis","termid":"GO:0061113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in pancreas morphogenesis","termid":"GO:0061114"}


id: PBO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 11","termid":"PBO:0046569"}


id: GO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated immunity","synonyms":[{"name":"regulation of immune cell mediated immunity","type":"exact"},{"name":"regulation of leucocyte mediated immunity","type":"exact"}],"termid":"GO:0002703"}


id: GO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of muscle cells is acquired and determined.","definition_xrefs":["CL:0000187","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate commitment","termid":"GO:0042693"}


id: GO:0021707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","GOC:dgh","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell differentiation","termid":"GO:0021707"}


id: GO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"macronucleus","secondary_identifiers":["Wikipedia:Macronucleus"],"termid":"GO:0031039"}


id: PBO:0056187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A1","termid":"PBO:0056187"}


id: PBO:0054304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1696","termid":"PBO:0054304"}


id: FYPO:0004071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004071"}


id: PBO:0057062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 146a","termid":"PBO:0057062"}


id: PBO:0040259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12 pseudogene 2","termid":"PBO:0040259"}


id: GO:0032828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell differentiation","termid":"GO:0032825"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation involved in immune response","termid":"GO:0032826"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"activation of natural killer cell differentiation during immune response","type":"narrow"},{"name":"positive regulation of NK cell differentiation during immune response","type":"related"},{"name":"positive regulation of natural killer cell development involved in immune response","type":"related"},{"name":"positive regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"stimulation of natural killer cell differentiation during immune response","type":"narrow"},{"name":"up regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"up-regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"upregulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032828"}


id: PBO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 28 pseudogene","termid":"PBO:0062149"}


id: GO:0018630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxytoluene + NADH + O2 = NAD+ + OH- + 3-hydroxybenzyl alcohol.","definition_xrefs":["UM-BBD_reactionID:r0081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3,5-xylenol methylhydroxylase activity","secondary_identifiers":["EC:1.14.13.-","MetaCyc:3-5-XYLENOL-METHYLHYDROXYLASE-RXN"],"termid":"GO:0018630"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: PR:O14123
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sod22 gene.","definition_xrefs":["UniProtKB:O14123","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na(+)/H(+) antiporter C3A11.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.09","synonyms":[{"name":"Spom972h-sod22","type":"exact"}],"termid":"PR:O14123"}


id: PBO:0040986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOK antisense RNA 1","termid":"PBO:0040986"}


id: PBO:0079102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSBP1 and BTNL2 antisense RNA 1","termid":"PBO:0079102"}


id: PBO:0065984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1K pseudogene","termid":"PBO:0065984"}


id: PBO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 7","termid":"PBO:0046372"}


id: GO:0072099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the ureteric bud along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in ureteric bud development","synonyms":[{"name":"ureteric bud anterior/posterior pattern formation","type":"related"}],"termid":"GO:0072099"}


id: PBO:0062040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 10","termid":"PBO:0062040"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: MOD:00828
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tryptophan residue and an L-cysteine residue by a thioester bond to form S-(L-tryptophanyl)-L-cysteine.","definition_xrefs":["RESID:AA0417","PubMed:16030216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-tryptophanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Tryptophanyl cysteine thioester (Cys-Trp)","type":"exact"},{"name":"S-(L-tryptophanyl)-L-cysteine","type":"exact"},{"name":"S-[2-amino-3-(1H-indol-3-yl)propanoyl]cysteine","type":"exact"},{"name":"XLNK1TrpSCys","type":"exact"},{"name":"tryptophan cysteine thioester","type":"exact"}],"termid":"MOD:00828"}


id: GO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of alternate transcripts of immunoglobulin genes through alternate splicing of exons.","definition_xrefs":["ISBN:0781735149","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"alternate splicing of immunoglobulin genes","synonyms":[{"name":"alternate splicing of antibody genes","type":"exact"}],"termid":"GO:0002564"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: GO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + 3,4',5-trihydroxy-stilbene + 4 CO2.","definition_xrefs":["MetaCyc:TRIHYDROXYSTILBENE-SYNTHASE-RXN","EC:2.3.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"trihydroxystilbene synthase activity","secondary_identifiers":["RHEA:11936","MetaCyc:RXN-87"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"},{"name":"resveratrol synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050350"}


id: PBO:0053282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens intrinsic membrane protein 2","termid":"PBO:0053282"}


id: PBO:0040375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 3","termid":"PBO:0040375"}


id: PR:O74962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pantothenate kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.01c","secondary_identifiers":["UniProtKB:O74962"],"synonyms":[{"name":"Spom972h-PANK3","type":"exact"},{"name":"pantothenic acid kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74962"}


id: PBO:0028988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_small_RNA_level_(obsolete_FYPO:0003262)","termid":"PBO:0028988"}


id: GO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central T cell tolerance induction","synonyms":[{"name":"central T lymphocyte tolerance induction","type":"exact"},{"name":"central T-cell tolerance induction","type":"exact"},{"name":"central T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002512"}


id: PR:P87014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-S-isoprenylcysteine O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00496","PANTHER:PTHR12714:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S-isoprenylcysteine O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.12c","secondary_identifiers":["UniProtKB:P87014"],"synonyms":[{"name":"PPMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ICMT","type":"exact"},{"name":"isoprenylcysteine carboxylmethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pcCMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylated protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylcysteine carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87014"}


id: PBO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 4","termid":"PBO:0072028"}


id: PBO:0081256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF25 divergent transcript","termid":"PBO:0081256"}


id: FYPO:0007831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during anaphase B of mitosis. The nodes are \\\"ring\\\" nodes, observed when the contractile ring is constricting.","definition_xrefs":["PMID:33496728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic anaphase B","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical R-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during anaphase B","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic anaphase B during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical ring node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007831"}


id: PBO:0072841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 pseudogene 1","termid":"PBO:0072841"}


id: SO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The primary transcript of an evolutionarily conserved eukaryotic low molecular weight RNA capable of intermolecular hybridization with both homologous and heterologous 18S rRNA.","definition_xrefs":["PMID:2251119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA_primary_transcript","synonyms":[{"name":"4.5S snRNA primary transcript","type":"exact"},{"name":"U14 snoRNA primary transcript","type":"exact"}],"termid":"SO:0005837"}


id: PBO:0042319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD38 molecule","termid":"PBO:0042319"}


id: GO:1903937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acrylamide stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16292499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acrylamide","termid":"GO:1903937"}


id: PBO:0027636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027636"}


id: GO:0042419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0198506732","GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine catabolic process","synonyms":[{"name":"adrenaline catabolic process","type":"exact"},{"name":"adrenaline catabolism","type":"exact"},{"name":"epinephrine breakdown","type":"exact"},{"name":"epinephrine catabolism","type":"exact"},{"name":"epinephrine degradation","type":"exact"}],"termid":"GO:0042419"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: PBO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_negative_effect","termid":"PBO:0035694"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: GO:0030945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of phosphate removal from a phosphotyrosine using cysteine as a nucleophile and proceed by means of a thiol-phosphate intermediate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140096","GO:0004721","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity, via thiol-phosphate intermediate","termid":"GO:0030945"}


id: GO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-NFAT signaling cascade","termid":"GO:0070884"},{"relation_name":"is_a","term_name":"positive regulation of calcineurin-mediated signaling","termid":"GO:0106058"},{"relation_name":"positively_regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051533"],"synonyms":[{"name":"activation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"positive regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"positive regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"positive regulation of calcineurin-NFAT signalling cascade","type":"exact"},{"name":"stimulation of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"up regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"up-regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"upregulation of calcineurin-NFAT signaling cascade","type":"exact"}],"termid":"GO:0070886"}


