# terms

id: PBO:0029383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trichostatin_A","termid":"PBO:0029383"}


id: PR:O74940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine-dependent NAD(+) synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04261","PRO:DNx","PANTHER:PTHR23090:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.02","secondary_identifiers":["UniProtKB:O74940"],"synonyms":[{"name":"NAD(+) synthase [glutamine-hydrolyzing] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NADSYN1","type":"exact"}],"termid":"PR:O74940"}


id: GO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NFAT (nuclear factor of activated T cells) proteins, a family of transcription factors. NFAT proteins have crucial roles in the development and function of the immune system.","definition_xrefs":["PMID:15928679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"NFAT protein binding","secondary_identifiers":["GO:0051528","GO:0051530","GO:0051526","GO:0051527","GO:0051529"],"synonyms":[{"name":"NFAT binding","type":"exact"},{"name":"NFAT1 protein binding","type":"narrow"},{"name":"NFAT2 protein binding","type":"narrow"},{"name":"NFAT3 protein binding","type":"narrow"},{"name":"NFAT4 protein binding","type":"narrow"},{"name":"NFAT5 protein binding","type":"narrow"},{"name":"NFATc binding","type":"narrow"},{"name":"NFATc1 binding","type":"narrow"},{"name":"NFATc2 binding","type":"narrow"},{"name":"NFATc3 binding","type":"narrow"},{"name":"NFATc4 binding","type":"narrow"},{"name":"NFATp binding","type":"narrow"},{"name":"NFATx binding","type":"narrow"},{"name":"non-calcium-regulated NFAT protein binding","type":"narrow"},{"name":"nuclear factor of activated T cell protein binding","type":"exact"}],"termid":"GO:0051525"}


id: PR:000050504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has not been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279/Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:16920624","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/UnPhos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom-dis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279/Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, PR:000026291","type":"narrow"},{"name":"dis1/UnPhos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050504"}


id: GO:0003972
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86815],"is_not":false,"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (ribonucleotide)n-3'-hydroxyl + 5'-phospho-(ribonucleotide)m = (ribonucleotide)n+m + AMP + diphosphate.","definition_xrefs":["EC:6.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"RNA ligase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696816","MetaCyc:RNA-LIGASE-ATP-RXN"],"synonyms":[{"name":"poly(ribonucleotide):poly(ribonucleotide) ligase (AMP-forming)","type":"related"},{"name":"polyribonucleotide ligase activity","type":"related"},{"name":"polyribonucleotide synthase (ATP) activity","type":"related"},{"name":"ribonucleic ligase activity","type":"broad"}],"termid":"GO:0003972","terms_by_termid":{"GO:0003972":null}}


id: PBO:0090909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14","termid":"PBO:0090909"}


id: PBO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Histone Deacetylase","termid":"PBO:0016942"}


id: SO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (59-60 nt long) containing 5' and 3' ends that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_II_RNA","synonyms":[{"name":"class II RNA","type":"exact"}],"termid":"SO:0000989"}


id: GO:1905414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"negatively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dense core granule exocytosis","synonyms":[{"name":"down regulation of dense core granule exocytosis","type":"exact"},{"name":"down regulation of dense core vesicle exocytosis","type":"exact"},{"name":"down-regulation of dense core granule exocytosis","type":"exact"},{"name":"down-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"downregulation of dense core granule exocytosis","type":"exact"},{"name":"downregulation of dense core vesicle exocytosis","type":"exact"},{"name":"inhibition of dense core granule exocytosis","type":"narrow"},{"name":"inhibition of dense core vesicle exocytosis","type":"narrow"},{"name":"negative regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905414"}


id: GO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of the ectoplacental cone acquires specialized features of a spongiotrophoblast of the placenta. A spongiotrophoblast cell is a basophilic cell.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast differentiation","synonyms":[{"name":"spongiotrophoblast cell differentiation","type":"exact"}],"termid":"GO:0060708"}


id: FYPO:0004178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h+ mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:8668157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h+ cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h+ cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h+ cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h+ cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h+ cells","type":"exact"}],"termid":"FYPO:0004178"}


id: PBO:0084383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity glucose transporter of the major facilitator superfamily; expression is induced in low or high glucose conditions; HXT3 has a paralog, HXT5, that arose from the whole genome duplication","termid":"PBO:0084383"}


id: PBO:0084658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mismatch repair protein; forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability","termid":"PBO:0084658"}


id: GO:0033156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligogalacturonides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oligogalacturonide transport","termid":"GO:0033156"}


id: PBO:0086772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5p of TOM (Translocase of the Mitochondrial Outer Membrane) complex; YDR056C is not an essential protein","termid":"PBO:0086772"}


id: PBO:0069362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 622, pseudogene","termid":"PBO:0069362"}


id: PBO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_quiescence","termid":"PBO:0035716"}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: PBO:0074910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 81","termid":"PBO:0074910"}


id: GO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transmembrane transporter activity (obsolete GO:0042911)","synonyms":[{"name":"acridine transporter activity","type":"related"}],"termid":"GO:0042911"}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: PR:O14367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gti1 gene.","definition_xrefs":["UniProtKB:O14367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transport inducer 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.01c","synonyms":[{"name":"Spom972h-gti1","type":"exact"}],"termid":"PR:O14367"}


id: FYPO:0002552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer lipid droplets than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"lipid droplets present in decreased numbers","synonyms":[{"name":"decreased level of lipid droplets","type":"related"},{"name":"fewer lipid droplets present during vegetative growth","type":"exact"},{"name":"lipid droplets present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"lipid droplets present in decreased numbers during vegetative growth","type":"exact"},{"name":"lipid droplets present in reduced numbers","type":"exact"},{"name":"lipid particles present in decreased numbers","type":"exact"}],"termid":"FYPO:0002552"}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: PBO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase (predicted)","termid":"PBO:0000311"}


id: GO:1903139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MAPK cascade involved in cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stress-activated MAPK cascade","termid":"GO:0032874"},{"relation_name":"is_a","term_name":"regulation of cell wall integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"positively_regulates","term_name":"cell wall integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall integrity MAPK cascade","synonyms":[{"name":"activation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"activation of MAPK cascade involved in cell wall organization or biogenesis","type":"narrow"},{"name":"activation of MAPKKK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"activation of Mpk1 cascade","type":"narrow"},{"name":"activation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"activation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"activation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"activation of Slt2 cascade","type":"narrow"},{"name":"activation of cell integrity MAPK pathway","type":"narrow"},{"name":"activation of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"positive regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"positive regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"positive regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"positive regulation of Mpk1 cascade","type":"narrow"},{"name":"positive regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"positive regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"positive regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"positive regulation of Slt2 cascade","type":"narrow"},{"name":"positive regulation of cell integrity MAPK pathway","type":"exact"},{"name":"positive regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"up regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"up regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"up regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"up regulation of Mpk1 cascade","type":"narrow"},{"name":"up regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"up regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"up regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"up regulation of Slt2 cascade","type":"narrow"},{"name":"up regulation of cell integrity MAPK pathway","type":"exact"},{"name":"up regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"up-regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"up-regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"up-regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"up-regulation of Mpk1 cascade","type":"narrow"},{"name":"up-regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"up-regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"up-regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"up-regulation of Slt2 cascade","type":"narrow"},{"name":"up-regulation of cell integrity MAPK pathway","type":"exact"},{"name":"up-regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"upregulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"upregulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"upregulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"upregulation of Mpk1 cascade","type":"narrow"},{"name":"upregulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"upregulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"upregulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"upregulation of Slt2 cascade","type":"narrow"},{"name":"upregulation of cell integrity MAPK pathway","type":"exact"},{"name":"upregulation of cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:1903139"}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: PBO:0078978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-3","termid":"PBO:0078978"}


id: GO:0097725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 79 of the histone.","definition_xrefs":["GOC:hbye","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 dimethylation (obsolete GO:0097725)","synonyms":[{"name":"histone H3 K79 dimethylation","type":"exact"},{"name":"histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:0097725"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: GO:0032479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: PBO:0049995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIPK1 antisense RNA 1","termid":"PBO:0049995"}


id: PBO:0058910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12128","termid":"PBO:0058910"}


id: GO:0099629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane of a symmetric synapse, consisting of anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components that spatially and functionally organize the neurotransmitter receptors at the synapse. This structure is not as thick or electron dense as the postsynaptic densities found in asymmetric synapses.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization","termid":"GO:0099572"},{"relation_name":"part_of","term_name":"symmetric synapse","termid":"GO:0032280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse","synonyms":[{"name":"postsynaptic density of inhibitory synapse","type":"exact"}],"termid":"GO:0099629"}


id: PBO:0044884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND10 pseudogene 1","termid":"PBO:0044884"}


id: PBO:0074600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11","termid":"PBO:0074600"}


id: GO:0075282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of uredinium development","termid":"GO:0075280"},{"relation_name":"negatively_regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uredinium development","termid":"GO:0075282"}


id: PBO:0068477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 56, pseudogene","termid":"PBO:0068477"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: PBO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from","termid":"PBO:0000099"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: GO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Co-chaperones are proteins that bind to chaperones and this complex then folds misfolded proteins. Co-chaperones by themselves do not possess chaperone activity.","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete co-chaperone activity (obsolete GO:0003767)","synonyms":[{"name":"co-chaperone activity","type":"exact"}],"termid":"GO:0003767"}


id: GO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-33 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-33 receptor activity","synonyms":[{"name":"IL-33 receptor activity","type":"exact"},{"name":"IL-33R","type":"exact"}],"termid":"GO:0002114"}


id: GO:0071680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indole-3-methanol stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to indole-3-methanol","synonyms":[{"name":"response to indole-3-carbinol","type":"exact"}],"termid":"GO:0071680"}


id: GO:2000005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metanephric S-shaped body morphogenesis.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric S-shaped body morphogenesis","termid":"GO:2000004"},{"relation_name":"negatively_regulates","term_name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric S-shaped body morphogenesis","termid":"GO:2000005"}


id: GO:1905446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:23707074","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"regulation of mitochondrial electron transport","type":"broad"},{"name":"regulation of organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:1905446"}


id: PBO:0028187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_length","termid":"PBO:0028187"}


id: GO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + anthranilate = N-methylanthranilate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:12180","EC:2.1.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"anthranilate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00984","MetaCyc:ANTHRANILATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:anthranilate N-methyltransferase activity","type":"related"},{"name":"anthranilic acid N-methyltransferase activity","type":"related"}],"termid":"GO:0030774"}


id: GO:1900602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of endocrocin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"endocrocin biosynthetic process","synonyms":[{"name":"endocrocin anabolism","type":"exact"},{"name":"endocrocin biosynthesis","type":"exact"},{"name":"endocrocin formation","type":"exact"},{"name":"endocrocin synthesis","type":"exact"}],"termid":"GO:1900602"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: GO:0008899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + succinyl-CoA = O-succinyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.46","RHEA:22008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-succinyltransferase activity","termid":"GO:0016750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homoserine O-succinyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01777","MetaCyc:HOMSUCTRAN-RXN"],"synonyms":[{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-homoserine O-succinyltransferase activity","type":"related"}],"termid":"GO:0008899"}


id: PBO:0091981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Dms1","termid":"PBO:0091981"}


id: GO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.","definition_xrefs":["RHEA:53544","GOC:kad","PMID:21934147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"7-hydroxymethyl chlorophyll a reductase activity","secondary_identifiers":["EC:1.17.7.2"],"termid":"GO:0090415"}


id: GO:0006017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"},{"relation_name":"is_a","term_name":"deoxyribose 1,5-bisphosphate metabolic process","termid":"GO:0046387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate biosynthetic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate anabolism","type":"exact"},{"name":"deoxyribose 1,5-bisphosphate biosynthesis","type":"exact"},{"name":"deoxyribose 1,5-bisphosphate formation","type":"exact"},{"name":"deoxyribose 1,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:0006017"}


id: PBO:0041063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF1 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041063"}


id: FYPO:0005544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abnormal.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell division site plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to plasma membrane division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005544"}


id: PBO:0048873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A5","termid":"PBO:0048873"}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: FYPO:0000523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished peroxisomal transport","synonyms":[{"name":"abolished peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"absent peroxisomal transport","type":"exact"},{"name":"peroxisomal transport abolished","type":"exact"},{"name":"peroxisomal transport abolished during vegetative growth","type":"exact"},{"name":"peroxisomal transport: absent","type":"related"}],"termid":"FYPO:0000523"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: PBO:0040451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11A","termid":"PBO:0040451"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: GO:1902232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["PMID:22080863","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive thymic T cell selection","synonyms":[{"name":"regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"regulation of positive thymic T-cell selection","type":"exact"},{"name":"regulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902232"}


id: GO:0032492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of oomycetes origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of oomycetes origin","termid":"GO:0002240"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of oomycetes origin","synonyms":[{"name":"detection of oomycetes associated molecule","type":"exact"}],"termid":"GO:0032492"}


id: PBO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YBR121C","termid":"PBO:0016536"}


id: PBO:0090481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, CHD family Hrp1","termid":"PBO:0090481"}


id: PBO:0068507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 96, pseudogene","termid":"PBO:0068507"}


id: GO:0022406
data:
  {"annotated_genes":["SJAG_00029","SJAG_03499","SJAG_03247","SJAG_01168","SJAG_01598","SJAG_01305","SJAG_03552","SJAG_02699","SJAG_02626","SJAG_03416","SJAG_04978","SJAG_04023","SJAG_00171","SJAG_04413","SJAG_01437","SJAG_01633","SJAG_01324","SJAG_04221","SJAG_01697","SJAG_02587","SJAG_03170","SJAG_02320","SJAG_00380","SJAG_04966","SJAG_03848","SJAG_03347","SJAG_01564","SJAG_03710","SJAG_01772","SJAG_01929","SJAG_00280","SJAG_03005","SJAG_04417","SJAG_04370","SJAG_05184","SJAG_00053","SJAG_03536","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[93593,100498,87628,114225,115012,107789,86577,97915,114749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[91696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[101966,87066,112729,103785,103154,103656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[105563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[111318,103156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[90457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[96336,97248,105945,105796,95638,96439,108809,114609,104817,113637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[113598,114280,86743,114505,114904,85892,96377,88477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:isa_complete","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane docking","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022406","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: PBO:0061870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 2","termid":"PBO:0061870"}


id: PBO:0086524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR209W is not an essential gene","termid":"PBO:0086524"}


id: GO:0016183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of clathrin coated pits in the presynaptic membrane endocytic zone, triggered by the presence of high concentrations of synaptic vesicle components. This process leads to, but does not include budding of the membrane to form new vesicles.","definition_xrefs":["PMID:20448150","PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"part_of","term_name":"synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0016185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle coating","termid":"GO:0016183"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["UniProtKB:Q9P7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: GO:0071549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"response to dexamethasone","termid":"GO:0071548"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dexamethasone stimulus","termid":"GO:0071549"}


id: PBO:0078695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 6-1","termid":"PBO:0078695"}


id: PBO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Sds21","termid":"PBO:0005220"}


id: GO:0051795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"positively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of catagen","synonyms":[{"name":"activation of catagen","type":"narrow"},{"name":"positive regulation of catagen","type":"related"},{"name":"stimulation of catagen","type":"narrow"},{"name":"up regulation of catagen","type":"related"},{"name":"up-regulation of catagen","type":"related"},{"name":"upregulation of catagen","type":"related"}],"termid":"GO:0051795"}


id: PBO:0029140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_autophagosome","termid":"PBO:0029140"}


id: PBO:0085462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted protein kinase; negatively regulates the hexosamine biosynthetic pathway (HBP), which converts fructose-6-phosphate into UDP-N-acetylglucosamine, a precursor of chitin biosynthesis, GPI-anchor formation and glycosylation; interacts genetically with GFA1, encoding the first enzyme in the HBP; involved in Gfa1p phosphorylation (S332, T334); contains a Pho85p-regulated SCF-CDC4 phosphodegron; unstable, cell cycle regulated protein, peaking at G1/S","termid":"PBO:0085462"}


id: PBO:0076286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spleen associated tyrosine kinase","termid":"PBO:0076286"}


id: PBO:0028175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mating_type_switching_resulting_in_duplication_or_deletion_in_mating-type_region","termid":"PBO:0028175"}


id: PATO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling cheese.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseous","synonyms":[{"name":"cheese-like","type":"exact"}],"termid":"PATO:0002109"}


id: PBO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm2 (predicted)","termid":"PBO:0001422"}


id: PBO:0055445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2876","termid":"PBO:0055445"}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: GO:0018064
data:
  {"annotated_genes":["SJAG_02868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83851],"is_not":false,"summary":null,"term":"GO:0018064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + S-adenosyl-L-methionine = N(tele)-methyl-L-histidyl-[protein] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:19369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016741","GO:0003674","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"protein-L-histidine N-tele-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.85","MetaCyc:2.1.1.85-RXN"],"synonyms":[{"name":"S-adenosyl methionine:protein-histidine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-histidine N-tele-methyltransferase activity","type":"related"},{"name":"actin-specific histidine methyltransferase activity","type":"related"},{"name":"peptidyl-histidine N-methyltransferase activity","type":"exact"},{"name":"protein (histidine) methyltransferase activity","type":"related"},{"name":"protein methylase IV activity","type":"narrow"},{"name":"protein-histidine N-methyltransferase activity","type":"broad"}],"termid":"GO:0018064","terms_by_termid":{"GO:0018064":null}}


id: FYPO:0002853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-cysteine ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}


id: GO:0034778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA = 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0034778"}


id: PBO:0090817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex alpha subunit Mas2","termid":"PBO:0090817"}


id: GO:0060943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation from a neural crest cell to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell development","termid":"GO:0060936"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell development","termid":"GO:0060943"}


id: PR:O13880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vht1 gene.","definition_xrefs":["UniProtKB:O13880","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.16c","synonyms":[{"name":"H(+)/biotin symporter vht1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-vht1","type":"exact"}],"termid":"PR:O13880"}


id: PBO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglucosaminyltransferase (predicted)","termid":"PBO:0000170"}


id: PBO:0081882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 830","termid":"PBO:0081882"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PBO:0057771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2117","termid":"PBO:0057771"}


id: FYECO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which uracil was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ura","synonyms":[{"name":"uracil added","type":"exact"}],"termid":"FYECO:0000225"}


id: GO:1904825
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a microtubule plus-end.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24039245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule end","termid":"GO:1905725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule plus-end","type":"exact"}],"termid":"GO:1904825","terms_by_termid":{"GO:1904518":null}}


id: PR:O74546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh3 gene.","definition_xrefs":["UniProtKB:O74546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.07","synonyms":[{"name":"Spom972h-omh3","type":"exact"}],"termid":"PR:O74546"}


id: GO:0007095
data:
  {"annotated_genes":["SJAG_01873","SJAG_02576","SJAG_02771","SJAG_04671","SJAG_01429","SJAG_01205","SJAG_00640","SJAG_01680","SJAG_01146","SJAG_02563","SJAG_00364","SJAG_03942","SJAG_05373","SJAG_02098","SJAG_02266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84739,85299,86385,87577,87936,90086,95483,96659,97174,102745,105454,107856,110380,113121,113793],"is_not":false,"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PMID:16299494","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03942":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031572","GO:0072425","GO:0072434","GO:1902504","GO:1902506","GO:1902505"],"synonyms":[{"name":"G2 DNA damage checkpoint","type":"related"},{"name":"G2/M transition DNA damage checkpoint","type":"exact"},{"name":"down regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"inhibition of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"negative regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"negative regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"signal transduction involved in G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0007095","terms_by_termid":{"GO:0007095":null}}


id: GO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemocyte precursor cell acquires the characteristics of a crystal cell, a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crystal cell differentiation","termid":"GO:0042688"}


id: GO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the cyanelle, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The best characterized cyanelle ribonuclease P complex, from the alga Cyanophora paradoxa, contains a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["PMID:12045094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"cyanelle ribonuclease P complex","synonyms":[{"name":"cyanelle RNase P complex","type":"exact"}],"termid":"GO:0030679"}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: GO:0036412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + oxalate = acetate + oxalyl-CoA.","definition_xrefs":["GOC:imk","PMID:23935849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"acetyl-CoA:oxalate CoA-transferase","secondary_identifiers":["RHEA:37883"],"termid":"GO:0036412"}


id: PBO:0010259
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster HMT1(CG4225)","termid":"PBO:0010259"}


id: GO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Singlet microtubule that lie underneath the inner membrane pellicle complex and emanate from the basal ring of the conoid.","definition_xrefs":["GOC:mb","PMID:24800253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"subpellicular microtubule","termid":"GO:0020025"}


id: GO:0042905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 9-cis-retinoic acid, a metabolically active vitamin A derivative.","definition_xrefs":["GOC:jl","PMID:11279029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"9-cis-retinoic acid metabolic process","synonyms":[{"name":"9-cis-retinoic acid metabolism","type":"exact"}],"termid":"GO:0042905"}


id: PBO:0109403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 30, pseudogene","termid":"PBO:0109403"}


id: PATO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000197 transfer_arousal (obsolete PATO:0000197)","termid":"PATO:0000197"}


id: PBO:0068363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 145","termid":"PBO:0068363"}


id: SO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rearrangement breakpoint between two different chromosomes.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_breakpoint","synonyms":[{"name":"interchromosomal breakpoint","type":"exact"}],"termid":"SO:0001873"}


id: PBO:0079299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tocopherol transfer protein","termid":"PBO:0079299"}


id: GO:0030388
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100587],"is_not":false,"summary":null,"term":"GO:0030388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fructose 1,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0030388","terms_by_termid":{"GO:0030388":null}}


id: PBO:0077487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 207","termid":"PBO:0077487"}


id: PBO:0049070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 87","termid":"PBO:0049070"}


id: PBO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8","termid":"PBO:0043106"}


id: POMBASE_GENE_EX_REL:directly_localizes
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"_global:has_input"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_localizes","termid":"POMBASE_GENE_EX_REL:directly_localizes"}


id: FYPO:0000885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000885"}


id: PBO:0062950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1","termid":"PBO:0062950"}


id: PBO:0056175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 homolog, negative regulator of RNA polymerase III","termid":"PBO:0056175"}


id: GO:0070114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, of the two lipid bilayers surrounding an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peribacteroid membrane","termid":"GO:0043661"},{"relation_name":"is_a","term_name":"organellar chromatophore membrane","termid":"GO:0070112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore outer membrane","synonyms":[{"name":"Paulinella-type chromatophore outer membrane","type":"exact"}],"termid":"GO:0070114"}


id: GO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of host on or near symbiont surface (obsolete GO:0044151)","synonyms":[{"name":"growth of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044151"}


id: FYPO:0004496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains more than one septum, when the cell is in a culture in stationary phase.","definition_xrefs":["PMID:8292390","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small multiseptate cell during stationary phase","termid":"FYPO:0004496"}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: PBO:0070092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 6 pseudogene","termid":"PBO:0070092"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: PBO:0085956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutation does not confer any obvious defects in growth, spore germination, viability, or carbohydrate utilization","termid":"PBO:0085956"}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: PBO:0039564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 60","termid":"PBO:0039564"}


id: GO:0072188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric cap acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"},{"relation_name":"is_a","term_name":"metanephric cap formation","termid":"GO:0072187"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap specification","termid":"GO:0072188"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: GO:0018983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.","definition_xrefs":["UM-BBD_pathwayID:car"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldoxime metabolic process","termid":"GO:0019330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pao"],"synonyms":[{"name":"Z-phenylacetaldoxime metabolism","type":"exact"}],"termid":"GO:0018983"}


id: PBO:0001473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family (predicted)","termid":"PBO:0001473"}


id: GO:0110112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","PMID:27365390","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid transporter activity","termid":"GO:0110112"}


id: PBO:0067512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 653, pseudogene","termid":"PBO:0067512"}


id: FYPO:0006142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal G0 to G1 transition","synonyms":[{"name":"normal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0006142"}


id: GO:0007558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of juvenile hormone secretion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of juvenile hormone secretion","termid":"GO:0007558"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: GO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that catalyzes the cleavage of complement components C3 and C5, and acts in the classical pathway of complement activation; consists of one monomer of C2a and one monomer of C4b; C2a is the catalytic subunit, but cannot catalyze cleavage alone.","definition_xrefs":["BRENDA:3.4.21.43","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"classical-complement-pathway C3/C5 convertase complex","termid":"GO:0005601"}


id: GO:0021862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of neurons. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early neuron differentiation in forebrain","termid":"GO:0021862"}


id: PR:P87227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centromere protein I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00370","PANTHER:PTHR15408:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein mis6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.20c","secondary_identifiers":["UniProtKB:P87227"],"synonyms":[{"name":"Spom972h-CENPI","type":"exact"},{"name":"sim4 complex subunit mis6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87227"}


id: FYPO:0006354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription during glucose starvation","synonyms":[{"name":"abnormal transcription during cellular response to glucose starvation","type":"exact"},{"name":"abnormal transcription during glucose depletion","type":"exact"},{"name":"abnormal transcription during glucose deprivation","type":"exact"},{"name":"abnormal transcription during glucose limitation","type":"related"},{"name":"abnormal transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0006354"}


id: PBO:0078312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 8-1","termid":"PBO:0078312"}


id: PBO:0050844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of Bruton tyrosine kinase pseudogene 1","termid":"PBO:0050844"}


id: PBO:0028129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trapoxin_A","termid":"PBO:0028129"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:go_curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"contractile muscle fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: PBO:0088930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr1","termid":"PBO:0088930"}


id: GO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endothelial cell to another endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-cell adhesion","termid":"GO:0071603"}


id: GO:0034456
data:
  {"annotated_genes":["SJAG_03931","SJAG_03617","SJAG_03156","SJAG_00142","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87334,89879,104534,108121,108203],"is_not":false,"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome. In S. cerevisiae, it is composed of Rrp7p, Utp22p, Ckb1p, Cka1p, Ckb2p and Cka2p.","definition_xrefs":["GOC:mah","PMID:17515605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_03156":null,"SJAG_03617":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0030684","GO:0005730","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UTP-C complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rrp7p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034456","terms_by_termid":{"GO:0034456":null}}


id: RO:HOM0000025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pro-orthology_relationship_with","synonyms":[{"name":"pro-orthologous to","type":"exact"}],"termid":"RO:HOM0000025"}


id: PBO:0064715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 51","termid":"PBO:0064715"}


id: PBO:0057674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1265","termid":"PBO:0057674"}


id: GO:0005805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-Golgi transport vesicle (obsolete GO:0005805)","synonyms":[{"name":"ER-Golgi transport vesicle","type":"exact"}],"termid":"GO:0005805"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: PBO:0027835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septum_disassembly","termid":"PBO:0027835"}


id: PBO:0108692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec72","termid":"PBO:0108692"}


id: FYPO:0007462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased filamentous actin level","synonyms":[{"name":"increased F-actin level","type":"exact"},{"name":"increased accumulation of filamentous actin in cell","type":"related"},{"name":"increased cellular F-actin level","type":"exact"},{"name":"increased cellular filamentous actin level","type":"exact"},{"name":"increased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"increased filamentous actin level during vegetative growth","type":"exact"}],"termid":"FYPO:0007462"}


id: PBO:0111782
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0111782"}


id: PBO:0058060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4280 host gene","termid":"PBO:0058060"}


id: GO:0019524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate catabolic process","termid":"GO:0046181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate catabolic process","secondary_identifiers":["MetaCyc:DHGLUCONATE-PYR-CAT-PWY"],"synonyms":[{"name":"keto-D-gluconate breakdown","type":"exact"},{"name":"keto-D-gluconate catabolism","type":"exact"},{"name":"keto-D-gluconate degradation","type":"exact"}],"termid":"GO:0019524"}


id: PBO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16","termid":"PBO:0018105"}


id: PBO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein gamma","termid":"PBO:0042684"}


id: PR:O42963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup44 gene.","definition_xrefs":["UniProtKB:O42963","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup44 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.15","synonyms":[{"name":"Spom972h-nup44","type":"exact"},{"name":"nuclear pore protein nup44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42963"}


id: PBO:0081804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 733, pseudogene","termid":"PBO:0081804"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: PBO:0083856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2","termid":"PBO:0083856"}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: GO:0032295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which satellite glial cells isolate neuronal cell bodies.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ensheathment of neurons","termid":"GO:0007272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neuronal cell bodies","termid":"GO:0032295"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: MOD:00134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue by an isopeptide bond to form N6-glycyl-L-lysine.","definition_xrefs":["RESID:AA0125","ChEBI:21885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-glycyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(aminoacetyl)amino]hexanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl lysine isopeptide (Gly-Lys) (interchain with K-...)","type":"exact"},{"name":"CROSSLNK Glycyl lysine isopeptide (Lys-Gly) (interchain with G-...)","type":"exact"},{"name":"N6-(glycyl)-L-lysine","type":"exact"},{"name":"N6-glycyllysine","type":"exact"},{"name":"XLNK-N6Lys-1Gly","type":"exact"}],"termid":"MOD:00134"}


id: GO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 3-O-acetylation of a trichothecene. Trichothecenes are sesquiterpene epoxide mycotoxins that act as potent inhibitors of eukaryotic protein synthesis.","definition_xrefs":["PMID:10583973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase activity","termid":"GO:0045462"}


id: GO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"positively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor recycling","synonyms":[{"name":"activation of receptor recycling","type":"narrow"},{"name":"stimulation of receptor recycling","type":"narrow"},{"name":"up regulation of receptor recycling","type":"exact"},{"name":"up-regulation of receptor recycling","type":"exact"},{"name":"upregulation of receptor recycling","type":"exact"}],"termid":"GO:0001921"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: PBO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase Rrg1 (predicted)","termid":"PBO:0005468"}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: PBO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within","termid":"PBO:0035697"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: PBO:0045993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 1","termid":"PBO:0045993"}


id: PBO:0085269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal adenine nucleotide transporter; involved in beta-oxidation of medium-chain fatty acid; required for peroxisome proliferation","termid":"PBO:0085269"}


id: PBO:0003610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec31 (predicted)","termid":"PBO:0003610"}


id: PBO:0083896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup49p)","termid":"PBO:0083896"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["GOC:rb","PMID:11238902","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["GOC:elh","PMID:10915863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: PBO:0066951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 253","termid":"PBO:0066951"}


id: FYPO:0000709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under nitrogen starvation conditions, such as in nitrogen-deficient minimal medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth during nitrogen starvation","secondary_identifiers":["FYPO:0002124"],"synonyms":[{"name":"decreased cell population growth during nitrogen depletion","type":"exact"},{"name":"decreased cell population growth during nitrogen deprivation","type":"exact"},{"name":"decreased cell population growth in response to nitrogen starvation","type":"exact"},{"name":"hypersensitive to nitrogen starvation","type":"related"},{"name":"reduced cell population growth during nitrogen starvation","type":"related"},{"name":"sensitive to nitrogen depletion","type":"related"},{"name":"sensitive to nitrogen deprivation","type":"related"},{"name":"sensitive to nitrogen starvation","type":"related"},{"name":"slow cell population growth during nitrogen starvation","type":"narrow"},{"name":"slow cell population growth in nitrogen-deficient minimal medium","type":"related"},{"name":"slow growth during nitrogen starvation","type":"broad"}],"termid":"FYPO:0000709"}


id: PBO:0072273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 2","termid":"PBO:0072273"}


id: FYPO:0003109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere during vegetative growth","termid":"FYPO:0003108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to telomere during vegetative growth","synonyms":[{"name":"abolished protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abolished protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"protein absent from telomere during vegetative growth","type":"related"},{"name":"protein localization to telomere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003109"}


id: PBO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036078"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: PBO:0087120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger ubiquitin ligase (E3); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; null mutant sensitive to hydroxyurea (HU)","termid":"PBO:0087120"}


id: SO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA sequence that has catalytic activity with or without an associated ribonucleoprotein.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"enzymatic","termid":"SO:0001185"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA","synonyms":[{"name":"enzymatic RNA","type":"exact"}],"termid":"SO:0000372"}


id: PBO:0080560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 11","termid":"PBO:0080560"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: GO:0140750
data:
  {"annotated_genes":["SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109429],"is_not":false,"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A histone octamer slider activity that spaces nucleosomes along chromosomal DNA. This activity is involved in assembling chromatin in uniform nucleosome arrays to regulate transcription by RNA polymerases I, II, and III, as well as DNA replication, recombination and repair.","definition_xrefs":["PMID:16468993","PMID:11683384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone octamer slider activity","termid":"GO:0140751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleosome array spacer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome array spacing activity","type":"exact"}],"termid":"GO:0140750","terms_by_termid":{"GO:0140750":null}}


id: PBO:0058729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6857","termid":"PBO:0058729"}


id: GO:1900038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"negatively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hypoxia","synonyms":[{"name":"down regulation of cellular response to hypoxia","type":"related"},{"name":"down regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"down-regulation of cellular response to hypoxia","type":"related"},{"name":"down-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"downregulation of cellular response to hypoxia","type":"related"},{"name":"downregulation of cellular response to hypoxic stress","type":"exact"},{"name":"downregulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"inhibition of cellular response to hypoxia","type":"related"},{"name":"inhibition of cellular response to hypoxic stress","type":"exact"},{"name":"inhibition of cellular response to lowered oxygen tension","type":"exact"},{"name":"negative regulation of cellular response to hypoxic stress","type":"exact"},{"name":"negative regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900038"}


id: PATO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric","termid":"PATO:0015006"}


id: PBO:0078416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-2","termid":"PBO:0078416"}


id: PBO:0080358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 13 pseudogene","termid":"PBO:0080358"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: GO:0160082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-prolyl-[hypoxia-inducible factor alpha subunit] + O2 = CO2 + succinate + trans-4-hydroxy-L-prolyl-[hypoxia-inducible factor alpha subunit].","definition_xrefs":["PMID:11595184","PMID:11598268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"hypoxia-inducible factor-proline dioxygenase activity","secondary_identifiers":["RHEA:48400","EC:1.14.11.29"],"synonyms":[{"name":"HIF hydroxylase","type":"broad"},{"name":"HIF prolyl hydroxylase","type":"exact"}],"termid":"GO:0160082"}


id: GO:0140489
data:
  {"annotated_genes":["SJAG_02886","SJAG_01215","SJAG_01756","SJAG_03835","SJAG_00856","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102570,104989,106719,96207,113285,105754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140490"}]},"cv_name":"molecular_function","definition":"The action of a molecule that provides a shape or a sequence mimicking or complementary to the final product, providing template for copying the original molecule's shape or sequence.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular template activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140489","terms_by_termid":{"GO:0140490":null}}


id: GO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of an epithelial tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"tube closure","termid":"GO:0060606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"}


id: GO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 8.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 8 signaling pathway","synonyms":[{"name":"TLR8 signaling pathway","type":"exact"},{"name":"toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034158"}


id: PR:O13761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.11 gene.","definition_xrefs":["UniProtKB:O13761","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A2.11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.11","synonyms":[{"name":"Spom972h-SPAC17A2.11","type":"exact"}],"termid":"PR:O13761"}


id: _global:finishes
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X finishes Y if X is part_of Y and X and Y share a 3' or C terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finishes","termid":"_global:finishes"}


id: PBO:0087613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate","termid":"PBO:0087613"}


id: PBO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp5 interacting protein Ftp105","termid":"PBO:0001179"}


id: PBO:0034369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-commensually_interacts_with","termid":"PBO:0034369"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0040169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain containing 1","termid":"PBO:0040169"}


id: PBO:0066997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL1","termid":"PBO:0066997"}


id: PBO:0027962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027962"}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: GO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by one or more rounds of nuclear division without cytokinesis.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation","termid":"GO:0006949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation by mitosis without cytokinesis","synonyms":[{"name":"syncytium formation by mitosis without cell division","type":"related"}],"termid":"GO:0000769"}


id: PATO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mottled","termid":"PATO:0002274"}


id: PR:G2TRP2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein new15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.23","synonyms":[{"name":"Spom972h-new15","type":"exact"}],"termid":"PR:G2TRP2"}


id: PR:Q9US24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein ATG12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13385:SF0","PRO:DNx","OMA:SCHPO00908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein ATG12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.06c","secondary_identifiers":["UniProtKB:Q9US24"],"synonyms":[{"name":"Spom972h-ATG12","type":"exact"},{"name":"autophagy-related protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US24"}


id: PBO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 133 (pseudogene)","termid":"PBO:0044852"}


id: PBO:0034049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-child_nucleus_of_in_male","termid":"PBO:0034049"}


id: PBO:0072475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 4","termid":"PBO:0072475"}


id: PR:O14188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng2 gene.","definition_xrefs":["UniProtKB:O14188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rng2","type":"exact"}],"termid":"PR:O14188"}


id: FYPO:0008037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate of elongation of a transcript initiated from an RNA polymerase II promoter is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription elongation from RNA polymerase II promoter","termid":"FYPO:0004065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of transcription elongation from RNA polymerase II promoter","termid":"FYPO:0008037"}


id: PBO:0091913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf9","termid":"PBO:0091913"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: GO:0042792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of ribosomal RNA (rRNA) from a mitochondrial DNA template.","definition_xrefs":["PMID:23632312","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA transcription (obsolete GO:0042792)","synonyms":[{"name":"rRNA transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0042792"}


id: GO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + H+ + NADPH + O2 = 3-hydroxybenzoyl-CoA + H2O + NADP+.","definition_xrefs":["RHEA:23216","EC:1.14.13.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoyl-CoA 3-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02449","MetaCyc:1.14.13.58-RXN"],"synonyms":[{"name":"benzoyl-CoA 3-hydroxylase activity","type":"exact"},{"name":"benzoyl-CoA,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0047090"}


id: PATO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000989 absolute consistency value (obsolete PATO:0000989)","termid":"PATO:0000989"}


id: PBO:0091247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1","termid":"PBO:0091247"}


id: GO:0048363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectin component of mucilage.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mucilage pectin metabolic process","synonyms":[{"name":"mucilage pectin metabolism","type":"exact"}],"termid":"GO:0048363"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_03400","SJAG_00877","SJAG_01636","SJAG_01336","SJAG_03256","SJAG_02716","SJAG_00051","SJAG_04725","SJAG_02029","SJAG_04715","SJAG_04983","SJAG_01923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86566],"is_not":false,"summary":null,"term":"GO:0015802"},{"annotations":[86565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[100152,100154,93485,100151,63585,100153,84632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[62778,94952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99969,98931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99970,106157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0015802":null,"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: GO:0055112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splitting or migration of one epithelial sheet into two involved in the process of deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"delamination involved in gastrulation with mouth forming second","termid":"GO:0055112"}


id: GO:0060621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cholesterol import. Cholesterol import is the directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"negatively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol import","termid":"GO:0060621"}


id: PBO:0051642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1 pseudogene 1","termid":"PBO:0051642"}


id: PBO:0062180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 1 pseudogene","termid":"PBO:0062180"}


id: PBO:0065366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing 2","termid":"PBO:0065366"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: GO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an increase in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of increased arterial stretch","termid":"GO:0003023"}


id: GO:0102854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-18:1-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-18:2-2-18:1-phosphatidylcholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8321"],"termid":"GO:0102854"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: GO:0061638
data:
  {"annotated_genes":["SJAG_00307","SJAG_02778","SJAG_01745","SJAG_01332","SJAG_04038","SJAG_01050","SJAG_00170","SJAG_03126","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86231,87476,88211,98185,102416,105799,108075,112632,113239],"is_not":false,"summary":null,"term":"GO:0061638"},{"annotations":[98186],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The specialized chromatin located in the centromeric core region or the entire centromeric region in organisms with point centromeres, which is enriched for CENP-A-containing nucleosomes. This chromatin forms a 3-dimensional structure which provides a platform for kinetochore assembly and microtubule attachment.","definition_xrefs":["PMID:22729156","PMID:20206496","PMID:24710126","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"chromosome, centromeric core domain","termid":"GO:0034506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00307":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"CENP-A containing chromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1904834"],"synonyms":[{"name":"centromeric core domain chromatin","type":"related"},{"name":"centromeric core region chromatin","type":"exact"},{"name":"chromatin containing CENP-A","type":"exact"},{"name":"nuclear CENP-A containing chromatin","type":"narrow"}],"termid":"GO:0061638","terms_by_termid":{"GO:0043505":null,"GO:0061638":null}}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: PBO:0063051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein associated with LIN7 2, MAGUK p55 family member","termid":"PBO:0063051"}


id: GO:0009377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the ATP-dependent hydrolysis of peptide bonds in substrates including E. coli SulA and misfolded proteins.","definition_xrefs":["PMID:10368141","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete HslUV protease activity (obsolete GO:0009377)","synonyms":[{"name":"HslUV protease activity","type":"exact"}],"termid":"GO:0009377"}


id: PBO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor Ncb2 (predicted)","termid":"PBO:0018017"}


id: GO:0035491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukotriene production involved in inflammatory response","termid":"GO:0035491"}


id: GO:0051206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving silicates, the salts of silicic acids. Silicates are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"silicate metabolic process","synonyms":[{"name":"silicate metabolism","type":"exact"}],"termid":"GO:0051206"}


id: GO:0097653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the intracellular environment and the plasma membrane; it excludes any external encapsulating structures.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unencapsulated part of cell","synonyms":[{"name":"non-encapsulated part of cell","type":"exact"}],"termid":"GO:0097653"}


id: GO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-(1,3)-N-acetyl-D-glucosaminyl-R = GDP + beta-D-galactosyl-(1,3)-[alpha-L-fucosyl-(1,4)]-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9603986","Reactome:R-HSA-5693925","RHEA:23628","MetaCyc:2.4.1.65-RXN"],"synonyms":[{"name":"(Le(a))-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"(Lea)-dependent (alpha-3/4)-fucosyltransferase activity","type":"broad"},{"name":"3-alpha-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"FucT-II activity","type":"broad"},{"name":"GDP-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:3-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 4I-alpha-L-fucosyltransferase activity","type":"related"},{"name":"Lewis FT activity","type":"broad"},{"name":"Lewis alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1,3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis blood group alpha-(1->3/4)-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1,3/4)-L-fucosyltransferase activity","type":"broad"},{"name":"Lewis(Le) blood group gene-dependent alpha-(1->3/4)-L-fucosyltransferase activity","type":"narrow"},{"name":"alpha(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1,3/1,4) fucosyltransferase III activity","type":"broad"},{"name":"alpha-(1,4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-(1->4)-L-fucosyltransferase activity","type":"broad"},{"name":"alpha-4-L-fucosyltransferase activity","type":"broad"},{"name":"beta-acetylglucosaminylsaccharide fucosyltransferase activity","type":"broad"},{"name":"blood group Lewis alpha-4-fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Le(a)-dependent fucosyltransferase activity","type":"broad"},{"name":"blood-group substance Lea-dependent fucosyltransferase","type":"broad"},{"name":"fuca(1,3)-glycosidic linkage formation","type":"related"},{"name":"galactoside 3(4)-L-fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose-beta-acetylglucosaminylsaccharide 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 4-alpha-fucosyltransferase activity","type":"related"}],"termid":"GO:0017060"}


id: GO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis.","definition_xrefs":["GOC:mah","GOC:jh","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline (obsolete GO:0007571)","synonyms":[{"name":"age-dependent decreased translational activity","type":"narrow"},{"name":"age-dependent increased protein content","type":"narrow"},{"name":"age-dependent yeast cell size increase","type":"related"},{"name":"nucleolar size increase","type":"narrow"}],"termid":"GO:0007571"}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: PBO:0018087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Prp24","termid":"PBO:0018087"}


id: FYPO:0006051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a lower extent than normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000121"],"is_obsolete":false,"name":"decreased lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"decreased lipid droplet localization to FSM leading edge","type":"exact"},{"name":"decreased lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"decreased lipid particle localization to prospore membrane leading edge","type":"exact"},{"name":"reduced lipid droplet localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006051"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: PATO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000913 qualitative value (obsolete PATO:0000913)","termid":"PATO:0000913"}


id: GO:0010506
data:
  {"annotated_genes":["SJAG_04655","SJAG_02765","SJAG_00824","SJAG_04232","SJAG_04496","SJAG_01716","SJAG_04435","SJAG_04502","SJAG_00704","SJAG_01184","SJAG_02433","SJAG_00004","SJAG_01509","SJAG_04249","SJAG_05000","SJAG_05289","SJAG_00457","SJAG_05346","SJAG_02723","SJAG_00169","SJAG_03371","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67773,71663,94695,113899],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[105397,114432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[102777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104786,104696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[110694,105815,95006,107088,95569,90309,103530,107972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[67984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[94146,102381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00169":null,"SJAG_00457":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01509":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03371":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010506","terms_by_termid":{"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0018345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104072,104071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["PMID:28732250","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164617","Reactome:R-HSA-163090"],"termid":"GO:0003720","terms_by_termid":{"GO:0003721":null}}


id: GO:0060180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of a female organism that is associated with reproduction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female mating behavior","termid":"GO:0060180"}


id: PBO:0054278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1668","termid":"PBO:0054278"}


id: GO:1902833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"activation of cell proliferation in dorsal spinal cord","type":"narrow"},{"name":"up regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"up-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"upregulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:1902833"}


id: PBO:0001217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase I alpha subunit Cwp1","termid":"PBO:0001217"}


id: GO:0043035
data:
  {"annotated_genes":["SJAG_03354","SJAG_00585","SJAG_01827","SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95702,103053,105270,111474],"is_not":false,"summary":null,"term":"GO:0043035"}]},"cv_name":"molecular_function","definition":"Binding to a chromatin insulator sequence, a DNA sequence that prevents enhancer-mediated activation or repression of transcription.","definition_xrefs":["GOC:jl","PMID:12783795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin DNA binding","termid":"GO:0031490"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"chromatin insulator sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043035","terms_by_termid":{"GO:0043035":null}}


id: PBO:0061528
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id: PBO:0047040
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id: GO:0048477
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id: GO:0006970
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id: PBO:0086418
data:
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id: FYECO:0000137
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type"}]}]},"win1delta":{"display_name":"win1delta","display_uniquename":"win1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04777:allele-1","expression":"Null"}]}]},"wis1delta":{"display_name":"wis1delta","display_uniquename":"wis1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02342:allele-1","expression":"Null"}]}]},"wis4delta":{"display_name":"wis4delta","display_uniquename":"wis4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03384:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00028","SJAG_03575","SJAG_04522","SJAG_01143","SJAG_02266","SJAG_01205","SJAG_03892","SJAG_04280","SJAG_02392","SJAG_03596","SJAG_05207","SJAG_03198","SJAG_01680","SJAG_01946","SJAG_00118"],"name":"YES","references_by_uniquename":{"PMID:20368354":null,"PMID:22300943":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:25866389":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null,"PMID:37233261":null},"secondary_identifiers":["FYECO:0000012"],"single_locus_annotated_genes":["SJAG_04777","SJAG_03351","SJAG_00993","SJAG_04280","SJAG_02592","SJAG_00118","SJAG_00601","SJAG_04332","SJAG_04522","SJAG_00514","SJAG_01680","SJAG_02923","SJAG_02266","SJAG_03596","SJAG_04551","SJAG_02392","SJAG_04312","SJAG_02771","SJAG_02576","SJAG_01605","SJAG_02342","SJAG_02819","SJAG_02379","SJAG_03892","SJAG_04287","SJAG_05207","SJAG_01355","SJAG_00409","SJAG_02486","SJAG_00364","SJAG_01745","SJAG_01205","SJAG_01956","SJAG_00266","SJAG_03920","SJAG_03720","SJAG_02527","SJAG_04009","SJAG_03384","SJAG_01050","SJAG_01181","SJAG_03581","SJAG_03143","SJAG_04843","SJAG_04671","SJAG_04883","SJAG_02252","SJAG_01410","SJAG_01143","SJAG_03198","SJAG_03453","SJAG_01794","SJAG_03753","SJAG_03575","SJAG_01718","SJAG_03048","SJAG_00028","SJAG_00429","SJAG_04697","SJAG_01753","SJAG_04284","SJAG_02013","SJAG_01946"],"single_locus_genotype_uniquenames":["oar2delta","byr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mkh1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","rad51delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","pmk1delta","pom1delta","nur1delta","chk1delta","tel1delta","gms1delta","scd2delta","cds1delta","pka1delta","mrc1delta","rip1delta","cem1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ace2delta","rad26delta","byr2delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pek1delta","gef1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","rad9delta","fum1delta","scd1delta","efc25delta","nup61delta","mdh1delta","rad1delta","wis4delta","gap1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta","sep1delta","win1delta","ras1delta","rad3delta","rad24delta","cox6delta","sdh3delta","wis1delta","mid1delta","rad25delta","atf1delta","ste11delta","ptp4delta","ste6delta","pyp1delta","cmp7delta","sty1delta","lem2delta","spk1delta","rga6delta","crb2delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"YE","type":"narrow"},{"name":"YE4S","type":"narrow"},{"name":"YE5S","type":"narrow"},{"name":"complex medium","type":"related"},{"name":"glucose rich medium","type":"exact"},{"name":"normal glucose rich medium","type":"exact"},{"name":"standard dextrose rich medium","type":"exact"},{"name":"standard glucose rich medium","type":"exact"}],"termid":"FYECO:0000137","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0102566
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90179],"is_not":false,"summary":null,"term":"GO:0102566"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-oleoylglycerone 3-phosphate + NADPH + H+ = 1-oleoyl-sn-glycero-3-phosphate + NADP.","definition_xrefs":["EC:1.1.1.101","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1-acyl dihydroxyacetone phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-15046"],"termid":"GO:0102566","terms_by_termid":{"GO:0102566":null}}


id: PBO:0028590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_growth","termid":"PBO:0028590"}


id: PBO:0065030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDX5 pseudogene 1","termid":"PBO:0065030"}


id: GO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell fate commitment","termid":"GO:0072253"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: GO:0061389
data:
  {"annotated_genes":["SJAG_04724","SJAG_00216","SJAG_03705","SJAG_04322","SJAG_02838","SJAG_01456","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106894,99619,95858,112595,84251,113982,102979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"Any process that modulates the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of direction of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061389","terms_by_termid":{"GO:0051523":null}}


id: PBO:0078072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 1","termid":"PBO:0078072"}


id: PBO:0066329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN2 divergent transcript","termid":"PBO:0066329"}


id: FYPO:0007746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle elongates during metaphase of the first meiotic nuclear division, when elongation is normally paused.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle elongation during meiotic metaphase I","synonyms":[{"name":"normal spindle elongation during meiotic metaphase I spindle phase II","type":"exact"},{"name":"normal spindle elongation during metaphase I","type":"exact"},{"name":"normal spindle elongation during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007746"}


id: GO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin phosphatase myosin binding (obsolete GO:0017021)","synonyms":[{"name":"myosin phosphatase myosin binding","type":"exact"}],"termid":"GO:0017021"}


id: PATO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/frequency"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frequency","termid":"PATO:0000044"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: GO:0099059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic active zone membrane (obsolete GO:0099059)","termid":"GO:0099059"}


id: GO:0021690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar molecular layer to attain its fully functional state. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar molecular layer development","termid":"GO:0021679"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer maturation","termid":"GO:0021690"}


id: PBO:0061451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 2","termid":"PBO:0061451"}


id: PBO:0027170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_minus-end","termid":"PBO:0027170"}


id: GO:0140540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:18457993","PMID:15749104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of melanization defense response","termid":"GO:0035009"},{"relation_name":"is_a","term_name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"},{"relation_name":"negatively_regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation melanotic encapsulation of foreign target","termid":"GO:0140540"}


id: GO:1902136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-secoisolariciresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(-)-secoisolariciresinol metabolic process","synonyms":[{"name":"(-)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902136"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0053067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte transmembrane adaptor 1","termid":"PBO:0053067"}


id: GO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of sclerotome development","termid":"GO:0061190"},{"relation_name":"positively_regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerotome development","termid":"GO:0061189"}


id: GO:0010617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the concentration of cytosolic free calcium ion [Ca2+]cyt with a regularity of approximately 24 hours.","definition_xrefs":["PMID:17982000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"circadian regulation of calcium ion oscillation","synonyms":[{"name":"circadian regulation of Ca2+ oscillation","type":"related"},{"name":"circadian regulation of [Ca2+]cyt oscillation","type":"related"},{"name":"circadian regulation of cytosolic calcium ion homeostasis","type":"exact"},{"name":"circadian regulation of cytosolic free calcium ion oscillation","type":"related"}],"termid":"GO:0010617"}


id: GO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which factors in the hemolymph (the invertebrate equivalent of vertebrate blood and lymph) precipitate into insoluble clots in order to prevent loss of body fluid, and at the same time prevent the movement of microbes. Hemolymph coagulation is also part of the invertebrate humoral immune response.","definition_xrefs":["PMID:10561606","ISBN:0198506732","PMID:11915949","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"humoral immune response","termid":"GO:0006959"},{"relation_name":"is_a","term_name":"hemostasis","termid":"GO:0007599"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"coagulation","termid":"GO:0050817"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemolymph coagulation","synonyms":[{"name":"hemolymph clotting","type":"exact"}],"termid":"GO:0042381"}


id: GO:0004471
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114578],"is_not":false,"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.","definition_xrefs":["EC:1.1.1.39","EC:1.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malic enzyme activity","termid":"GO:0004470"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"malate dehydrogenase (decarboxylating) (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012268","MetaCyc:1.1.1.39-RXN","KEGG_REACTION:R00214","GO:0004472","GO:0016619","RHEA:12653"],"synonyms":[{"name":"'malic' enzyme","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating)","type":"related"},{"name":"NAD-linked malic enzyme","type":"related"},{"name":"NAD-malic enzyme activity","type":"broad"},{"name":"NAD-specific malic enzyme","type":"related"},{"name":"malate dehydrogenase (decarboxylating) activity","type":"related"},{"name":"malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"GO:0004471","terms_by_termid":{"GO:0004471":null}}


id: PBO:0029438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029438"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: PBO:0057709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295b","termid":"PBO:0057709"}


id: PBO:0068338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF103-CHMP3 readthrough","termid":"PBO:0068338"}


id: MOD:01926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to one of the diastereomeric 3-hydroxy-L-aspartic acid residues.","definition_xrefs":["OMSSA:59","Unimod:35#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-aspartic acid","synonyms":[{"name":"(2S)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S)-3-hydroxyaspartic acid","type":"exact"},{"name":"3HyAsp","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"erythro-beta-hydroxylated L-aspartic acid","type":"exact"},{"name":"hydroxylationd","type":"exact"},{"name":"monohydroxylated aspartic acid","type":"exact"}],"termid":"MOD:01926"}


id: PBO:0056464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 2","termid":"PBO:0056464"}


id: GO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, compact region of heterochromatin located in the middle of the polytene chromosome chromocenter, which undergoes little or no replication during polytenization.","definition_xrefs":["PMID:8878678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"alpha-heterochromatin","termid":"GO:0005723"}


id: PBO:0068381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 182","termid":"PBO:0068381"}


id: PBO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 5","termid":"PBO:0071142"}


id: PBO:0005782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog","termid":"PBO:0005782"}


id: PBO:0084992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance","termid":"PBO:0084992"}


id: PBO:0109139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3109","termid":"PBO:0109139"}


id: PBO:0110041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 4","termid":"PBO:0110041"}


id: GO:2000897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin catabolic process","synonyms":[{"name":"Amylopectin catabolism","type":"exact"}],"termid":"GO:2000897"}


id: GO:1990690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi medial cisterna-derived vesicle to the lipid bilayer membrane around the Golgi cis cisterna. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"retrograde transport, vesicle recycling within Golgi","termid":"GO:0000301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"Golgi medial cisterna-derived vesicle fusion with Golgi cis cisterna membrane","synonyms":[{"name":"Golgi apparatus medial cisterna-derived vesicle fusion with Golgi apparatus cis cisterna membrane","type":"exact"},{"name":"medial-Golgi cisterna-derived vesicle fusion with cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990690"}


id: GO:0036099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of female germ-line stem cells.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line stem cell population maintenance","termid":"GO:0036099"}


id: PBO:0036470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1 (predicted)","termid":"PBO:0036470"}


id: PBO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo4-Spo6 kinase complex regulatory subunit Spo6","termid":"PBO:0004361"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_00027","SJAG_03828","SJAG_00605","SJAG_04192","SJAG_03373","SJAG_00839","SJAG_06622","SJAG_01310","SJAG_00633","SJAG_06621","SJAG_02369","SJAG_02796","SJAG_02009","SJAG_04495","SJAG_03903","SJAG_00685","SJAG_03660","SJAG_02107","SJAG_05314","SJAG_03852","SJAG_00461","SJAG_02945","SJAG_04334","SJAG_02135","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105059,99515,90660,105528,105065,101575,105527,105529,105532,94405,105060,105063,105531,105061,99774,91150,100586,101941,105526,112467,101942,94134,101577,105062,105064,101576,105530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107703,94323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72010,75050],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006096":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0084586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR062W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR061W","termid":"PBO:0084586"}


id: PBO:0005273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein Negative Regulator","termid":"PBO:0005273"}


id: PBO:0013106
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"csx1-related protein 1","termid":"PBO:0013106"}


id: PBO:0036260
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADEnine requiring","termid":"PBO:0036260"}


id: GO:0070722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the proteins Tle3 (also known as Grg3b) and Aes (Grg5), which are homologs of the Drosophila groucho gene product.","definition_xrefs":["PMID:8955148","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Tle3-Aes complex","synonyms":[{"name":"Grg3b-Grg5 complex","type":"exact"}],"termid":"GO:0070722"}


id: PBO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 divergent transcript","termid":"PBO:0060852"}


id: PBO:0071189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 30","termid":"PBO:0071189"}


id: PBO:0038319
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_electronic_publication_date","termid":"PBO:0038319"}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: GO:0102812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-(p-coumaroyl)-glucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8204"],"termid":"GO:0102812"}


id: GO:0007543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the interactions between somatic cells and gonadal cells that ultimately results in the specification of sexual status of the organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"primary sex determination, germ-line","termid":"GO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, somatic-gonadal interaction","synonyms":[{"name":"sex determination, somatic/gonadal interaction","type":"exact"}],"termid":"GO:0007543"}


id: GO:0120179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["PMID:25490267","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction disassembly","termid":"GO:0120179"}


id: PBO:0067124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 169, pseudogene","termid":"PBO:0067124"}


id: GO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinetochore multiprotein complex that bridges the subunits that are in contact with centromeric DNA and the subunits bound to microtubules during kinetochore assembly. In yeast, consists of Ctf19p, Okp1p, Mcm21p, and Ame1p.","definition_xrefs":["PMID:14633972","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0000776","GO:0005694","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"COMA complex","synonyms":[{"name":"Ctf19p-Okp1p-Mcm1p-Ame1p complex","type":"exact"}],"termid":"GO:0000817"}


id: PBO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, involved in translation initiation Psi1","termid":"PBO:0005792"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["UniProtKB:Q92348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: PBO:0051278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-9","termid":"PBO:0051278"}


id: GO:0140549
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the spore core (endospore core) that separates it from its external environment.","definition_xrefs":["PMID:23202530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spore inner membrane","synonyms":[{"name":"spore membrane","type":"broad"}],"termid":"GO:0140549"}


id: GO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An angiotensin receptor activity that acts via Gi protein coupling and cGMP (NO) generation, and may also act via additional signaling mechanisms.","definition_xrefs":["GOC:mah","PMID:10977869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor activity","termid":"GO:0001595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"angiotensin type II receptor activity","termid":"GO:0004945"}


id: PR:O13656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import receptor subunit TOM40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02828","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.13","secondary_identifiers":["UniProtKB:O13656"],"synonyms":[{"name":"Spom972h-TOMM40","type":"exact"},{"name":"translocase of outer membrane 40 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13656"}


id: PBO:0027283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0027283"}


id: PBO:0064102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 3","termid":"PBO:0064102"}


id: GO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + a 2'-deoxynucleoside = a nucleoside + a 2'-deoxynucleoside 5'-monophosphate.","definition_xrefs":["EC:2.7.1.77","MetaCyc:NUCLEOSIDE-PHOSPHOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside phosphotransferase activity","secondary_identifiers":["Reactome:R-HSA-2162066","Reactome:R-HSA-9754916","RHEA:19961"],"synonyms":[{"name":"nonspecific nucleoside phosphotransferase activity","type":"related"},{"name":"nucleotide:2'-nucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:3'-deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"nucleotide:nucleoside 5'-phosphotransferase activity","type":"related"}],"termid":"GO:0050146"}


id: PBO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPLANE1 antisense RNA 1","termid":"PBO:0043799"}


id: PBO:0056359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 1 interacting protein 1 like","termid":"PBO:0056359"}


id: PBO:0075943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 2","termid":"PBO:0075943"}


id: PBO:0089139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin related conserved fungal protein","termid":"PBO:0089139"}


id: PBO:0026677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_dodecyl_sulfate","termid":"PBO:0026677"}


id: GO:0090609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of the same species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species submerged biofilm formation","termid":"GO:0090609"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: PBO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 25, pseudogene","termid":"PBO:0070068"}


id: PBO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 53","termid":"PBO:0071914"}


id: GO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-galloyl-beta-D-glucose = 1,6-bis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["RHEA:11416","EC:2.3.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-glucogallin O-galloyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.90-RXN","KEGG_REACTION:R00049"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1-O-galloyl-beta-D-glucose O-galloyltransferase activity","type":"related"}],"termid":"GO:0047201"}


id: PBO:0086962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of the Fps1p glycerol channel; under nonstress conditions, binds to Fps1p to positively regulate glycerol transport; under osmotic stress, multiple phosphorylation by Hog1p causes Ask10p to dissociate from Fps1p; forms homodimers and heterodimerizes with paralog Rgc1p; phosphorylated in response to oxidative stress; has a role in destruction of Ssn8p; associates with RNA polymerase II holoenzyme","termid":"PBO:0086962"}


id: PBO:0047066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member A","termid":"PBO:0047066"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: GO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-1483107","MetaCyc:GLYCPDIESTER-RXN","Reactome:R-HSA-1483116","RHEA:12969"],"synonyms":[{"name":"IgD-binding protein D","type":"related"},{"name":"gene hpd protein","type":"related"},{"name":"glycerophosphodiester glycerophosphohydrolase activity","type":"related"},{"name":"glycerophosphoryl diester phosphodiesterase activity","type":"related"}],"termid":"GO:0008889"}


id: GO:0010922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"positive regulation of dephosphorylation","termid":"GO:0035306"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatase activity","termid":"GO:0010922"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of signal transduction in another organism","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: PBO:0029401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029401"}


id: PBO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 5, pseudogene","termid":"PBO:0060569"}


id: GO:0035231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a cytoneme, a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.","definition_xrefs":["PMID:10675901","PMID:10367889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"cytoneme morphogenesis","termid":"GO:0003399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cytoneme assembly","synonyms":[{"name":"cytoneme biogenesis","type":"related"}],"termid":"GO:0035231"}


id: PR:P36613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin mcs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.02","secondary_identifiers":["UniProtKB:P36613"],"synonyms":[{"name":"Spom972h-CCNH","type":"exact"},{"name":"mitotic catastrophe suppressor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36613"}


id: PATO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation(from_normal)","termid":"PATO:0000069"}


id: FYPO:0000860
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115341,115343],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115342,115344],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[115247,115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115246,115250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115327],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115473],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115329],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115680,115678,115679],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"},{"annotations":[115328],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal. 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id: FYPO:0002924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing maltose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on maltose carbon source","synonyms":[{"name":"decreased growth on maltose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on maltose carbon source","type":"exact"},{"name":"growth defects, growth inhibition in maltose-based medium","type":"related"},{"name":"reduced cell growth on maltose carbon source","type":"exact"},{"name":"slow cell growth on maltose carbon source","type":"narrow"}],"termid":"FYPO:0002924"}


id: GO:0034491
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of neutral amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"neutral amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034491","terms_by_termid":{"GO:0090516":null}}


id: GO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["GOC:sd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha-1,3-glucosidase activity","termid":"GO:0090600"}


id: GO:0061124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP","termid":"GO:0061122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}


id: GO:0071045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histone messenger RNA (mRNA) within the nucleus.","definition_xrefs":["PMID:17855393","GOC:dgf","GOC:krc","PMID:17179095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA catabolic process","termid":"GO:0071044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"nuclear histone mRNA catabolic process","termid":"GO:0071045"}


id: GO:0033340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"},{"relation_name":"is_a","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelvic fin development","termid":"GO:0033340"}


id: FYPO:0006918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during mitotic interphase","termid":"FYPO:0004753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during mitotic interphase","synonyms":[{"name":"abolished protein localisation to nucleoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to nucleoplasm during interphase of mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0006918"}


id: RO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"RO:0002018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","termid":"RO:0002017"}


id: PBO:0067604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 769, pseudogene","termid":"PBO:0067604"}


id: PR:O94536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase ucp12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.09c","synonyms":[{"name":"Spom972h-ucp12","type":"exact"}],"termid":"PR:O94536"}


id: GO:1990051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase C.","definition_xrefs":["PMID:3156004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase C activity","synonyms":[{"name":"PKC activation","type":"exact"},{"name":"protein kinase C activation","type":"exact"}],"termid":"GO:1990051"}


id: GO:0032525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the rostro-caudal axis of a somite, prior to the morphological formation of a somite boundary.","definition_xrefs":["GOC:bf","PMID:16326386","PMID:17360776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite rostral/caudal axis specification","synonyms":[{"name":"somite rostrocaudal axis specification","type":"exact"},{"name":"somite rostrocaudal polarity","type":"related"}],"termid":"GO:0032525"}


id: PBO:0005497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non functional as it contains a stop codon","termid":"PBO:0005497"}


id: PBO:0076102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 7","termid":"PBO:0076102"}


id: FYPO:0003913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a lower frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased minichromosome loss during vegetative growth","synonyms":[{"name":"decreased minichromosome loss during mitotic cell cycle","type":"related"},{"name":"reduced minichromosome loss during vegetative growth","type":"exact"}],"termid":"FYPO:0003913"}


id: PBO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y1","termid":"PBO:0061416"}


id: SO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC","secondary_identifiers":["http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"],"synonyms":[{"name":"P1","type":"exact"},{"name":"P1 artificial chromosome","type":"exact"}],"termid":"SO:0000154"}


id: GO:0018592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrocatechol + O2 + 4 e- + 3 H+ = H2O + nitrite + 1,2,4-benzenetriol.","definition_xrefs":["UM-BBD_reactionID:r0231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-nitrocatechol 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.166"],"termid":"GO:0018592"}


id: PBO:0089641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specifity cAMP/cGMP phosphodiesterase Cgs2","termid":"PBO:0089641"}


id: PBO:0084153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: GO:0106130
data:
  {"annotated_genes":["SJAG_06634","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[89902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[89903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[89905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RMP + diphosphate = R + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["PMID:5123876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01859":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"purine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748951","Reactome:R-HSA-74215","Reactome:R-HSA-9734274"],"termid":"GO:0106130","terms_by_termid":{"GO:0000310":null,"GO:0003999":null,"GO:0004422":null,"GO:0052657":null}}


id: GO:0061474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a phagolysosome.","definition_xrefs":["GOC:dph","PMID:22073313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"phagocytic vesicle membrane","termid":"GO:0030670"},{"relation_name":"part_of","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"phagolysosome membrane","termid":"GO:0061474"}


id: GO:0046681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbamate","synonyms":[{"name":"carbamate resistance","type":"related"},{"name":"carbamate susceptibility/resistance","type":"related"}],"termid":"GO:0046681"}


id: GO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class I phosphatidylinositol 3-kinase complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic class IA phosphoinositide 3-kinase (PI3K) subunit and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways.","definition_xrefs":["PMID:9255069","PMID:9759495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class I","termid":"GO:0097651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class IA","secondary_identifiers":["GO:0035030"],"synonyms":[{"name":"1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex","type":"exact"},{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA complex","type":"exact"},{"name":"class IA PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class IA","type":"exact"}],"termid":"GO:0005943"}


id: GO:0102551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["EC:2.5.1.116","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homogentisate geranylgeranyl transferase activity (obsolete GO:0102551)","termid":"GO:0102551"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:25736836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: PBO:0073579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 1","termid":"PBO:0073579"}


id: GO:0045786
data:
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id: FYPO:0005492
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id: GO:0001912
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id: PR:O14106
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgg8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rgg8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.06","synonyms":[{"name":"Spom972h-rgg8","type":"exact"}],"termid":"PR:O14106"}


id: PBO:0005898
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 8 (predicted)","termid":"PBO:0005898"}


id: FYPO:0001909
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein glycosylation is normal (i.e. indistinguishable from wild type). Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein glycosylation during vegetative growth","synonyms":[{"name":"normal protein glycosylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001909"}


id: PBO:0030540
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030540"}


id: GO:0100003
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sodium ion transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by transcription from RNA polymerase II promoter (obsolete GO:0100003)","termid":"GO:0100003"}


id: PBO:0076375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAB2 antisense RNA 1","termid":"PBO:0076375"}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: PBO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBP type","termid":"PBO:0000474"}


id: PBO:0068341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113A","termid":"PBO:0068341"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: PBO:0086481
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial transport protein; null mutant is viable, exhibits decreased levels of chitin and normal resistance to calcofluor white","termid":"PBO:0086481"}


id: SOFP:map
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  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A map location","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map","termid":"SOFP:map"}


id: PBO:0061808
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odr-4 GPCR localization factor homolog","termid":"PBO:0061808"}


id: PBO:0029379
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV","termid":"PBO:0029379"}


id: PBO:0053145
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 1","termid":"PBO:0053145"}


id: PBO:0038772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T1","termid":"PBO:0038772"}


id: PATO:0000750
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000750 learning and memory value (obsolete PATO:0000750)","termid":"PATO:0000750"}


id: FYECO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Calcium ions were completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium absent","termid":"FYECO:0000150"}


id: PBO:0005478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine induced death protein Cid2","termid":"PBO:0005478"}


id: GO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to F420, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme F420 binding","termid":"GO:0070967"}


id: GO:1905691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a lipid particle into its constituent components.","definition_xrefs":["GOC:pr","GOC:autophagy","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet disassembly","synonyms":[{"name":"adiposome disassembly","type":"exact"},{"name":"lipid body disassembly","type":"exact"},{"name":"lipid droplet reserve breakdown","type":"exact"},{"name":"lipid particle disassembly","type":"exact"}],"termid":"GO:1905691"}


id: FYPO:0005675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"normal protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005675"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PBO:0047119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member B","termid":"PBO:0047119"}


id: PBO:0065792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 1","termid":"PBO:0065792"}


id: PBO:0047974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 divergent transcript","termid":"PBO:0047974"}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:16849602","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: GO:0140598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and carrying a lipoprotein between two different cellular locations by moving along with the target lipoprotein.","definition_xrefs":["PMID:7628437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674","GO:0140597"],"is_obsolete":false,"name":"lipoprotein carrier activity","termid":"GO:0140598"}


id: PBO:0053262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF receptor subunit alpha","termid":"PBO:0053262"}


id: GO:0098729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["GOC:dos","PMID:19948499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell division","termid":"GO:0042078"},{"relation_name":"is_a","term_name":"symmetric stem cell division","termid":"GO:0098724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline stem cell symmetric division","termid":"GO:0098729"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: GO:0019350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"teichoic acid biosynthetic process","secondary_identifiers":["MetaCyc:TEICHOICACID-PWY"],"synonyms":[{"name":"teichoic acid anabolism","type":"exact"},{"name":"teichoic acid biosynthesis","type":"exact"},{"name":"teichoic acid formation","type":"exact"},{"name":"teichoic acid synthesis","type":"exact"}],"termid":"GO:0019350"}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: PBO:0074737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 95","termid":"PBO:0074737"}


id: GO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of heat generation.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heat generation","synonyms":[{"name":"down regulation of heat generation","type":"exact"},{"name":"down-regulation of heat generation","type":"exact"},{"name":"downregulation of heat generation","type":"exact"},{"name":"inhibition of heat generation","type":"narrow"}],"termid":"GO:0031651"}


id: PBO:0018091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transmembrane transporter (predicted)","termid":"PBO:0018091"}


id: PBO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification_during_vegetative_growth","termid":"PBO:0031664"}


id: PBO:0025420
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disorders","termid":"PBO:0025420"}


id: PATO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrorse","termid":"PATO:0002237"}


id: GO:0070349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of brown fat cell proliferation","termid":"GO:0070347"},{"relation_name":"positively_regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of brown fat cell proliferation","synonyms":[{"name":"activation of brown fat cell proliferation","type":"narrow"},{"name":"positive regulation of brown adipocyte proliferation","type":"exact"},{"name":"positive regulation of brown adipose cell proliferation","type":"exact"},{"name":"stimulation of brown fat cell proliferation","type":"narrow"},{"name":"up regulation of brown fat cell proliferation","type":"exact"},{"name":"up-regulation of brown fat cell proliferation","type":"exact"},{"name":"upregulation of brown fat cell proliferation","type":"exact"}],"termid":"GO:0070349"}


id: PBO:0087994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase; required for de novo biosynthesis of NAD+ from tryptophan via kynurenine; up-regulated by telomere uncapping, and interacts genetically with capping gene CDC13; overexpression reduces lipid droplet accumulation by skewing glycolytic flux towards biosynthesis of shikimate, aromatic amino acids, and NAD+ during aging and extends lifespan; regulated by Hst1p and Aftp","termid":"PBO:0087994"}


id: PBO:0039605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member E","termid":"PBO:0039605"}


id: PBO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain protein","termid":"PBO:0000462"}


id: PBO:0028140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_18S_rRNA_level","termid":"PBO:0028140"}


id: GO:1902808
data:
  {"annotated_genes":["SJAG_03699","SJAG_01401","SJAG_01210","SJAG_02723","SJAG_02404","SJAG_01825","SJAG_03681","SJAG_01311","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97749,113170,102781,102089,101932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[87887,102092,105027,111448,112017,97751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"positively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G1/S phase transition","type":"narrow"},{"name":"up regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"up-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"upregulation of cell cycle G1/S phase transition","type":"exact"}],"termid":"GO:1902808","terms_by_termid":{"GO:0007089":null,"GO:1900087":null}}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: GO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"sorbitol biosynthetic process","synonyms":[{"name":"sorbitol anabolism","type":"exact"},{"name":"sorbitol biosynthesis","type":"exact"},{"name":"sorbitol formation","type":"exact"},{"name":"sorbitol synthesis","type":"exact"}],"termid":"GO:0006061"}


id: PBO:0050687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 14","termid":"PBO:0050687"}


id: GO:0097616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12037568","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont type IV pilus-dependent motility","termid":"GO:0097615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of symbiont type IV pilus-dependent motility","synonyms":[{"name":"positive regulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097616"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: PBO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes","termid":"PBO:0006184"}


id: PBO:0076394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2A","termid":"PBO:0076394"}


id: GO:0044175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome membrane","synonyms":[{"name":"host endosome membrane","type":"exact"}],"termid":"GO:0044175"}


id: FYECO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ciclopirox olamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ciclopirox olamine","synonyms":[{"name":"+ ciclopirox olamine","type":"exact"}],"termid":"FYECO:0000423"}


id: PBO:0085072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-proteolytic ATPase of the AAA family; stimulates incorporation of the pyridoxal phosphate cofactor into Hem1p (5-aminolevulinic acid synthase); localized to the mitochondrial matrix; ortholog of vertebrate CLPX, which promotes erythropoiesis","termid":"PBO:0085072"}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: SO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_2_prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:054"],"synonyms":[{"name":"5,2'-O-dimethyluridine","type":"exact"},{"name":"five two prime O dimethyluridine","type":"exact"},{"name":"m5Um","type":"exact"}],"termid":"SO:0001346"}


id: PBO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 divergent transcript","termid":"PBO:0061642"}


id: FYPO:0000552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"},{"relation_name":"is_a","term_name":"decreased cell growth","termid":"FYPO:0004075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased pseudohyphal growth","secondary_identifiers":["FYPO:0000437"],"synonyms":[{"name":"decreased filamentous growth","type":"broad"},{"name":"filamentous growth: decreased","type":"broad"},{"name":"pseudohyphal growth: decreased","type":"related"},{"name":"reduced pseudohyphal growth","type":"exact"}],"termid":"FYPO:0000552"}


id: MOD:01834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfoxide","termid":"MOD:01834"}


id: SO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_attribute","synonyms":[{"name":"mRNA attribute","type":"exact"}],"termid":"SO:0000863"}


id: FYPO:0005165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is abnormal. Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PMID:17304223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"abnormal replication foci dynamics","type":"related"},{"name":"abnormal replication focus organization","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"abnormal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"abnormal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"abnormal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005165"}


id: GO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.","definition_xrefs":["RESID:AA0229"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018118)","synonyms":[{"name":"peptidyl-L-cysteine glutathione disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018118"}


id: GO:0102929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-propenylsulfenate = propanethiol S-oxide.","definition_xrefs":["EC:5.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"lachrymatory factor synthase activity","secondary_identifiers":["MetaCyc:RXN-8911"],"termid":"GO:0102929"}


id: GO:0009726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an endogenous stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of endogenous stimulus","synonyms":[{"name":"perception of endogenous stimulus","type":"related"}],"termid":"GO:0009726"}


id: PBO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.5","termid":"PBO:0000550"}


id: PBO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAT domain","termid":"PBO:0000490"}


id: PBO:0053131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase like","termid":"PBO:0053131"}


id: PR:Q09843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.02","secondary_identifiers":["UniProtKB:Q09843"],"synonyms":[{"name":"Spom972h-RFC4","type":"exact"},{"name":"activator 1 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"replication factor C2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09843"}


id: PBO:0077268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM9 domain family member B","termid":"PBO:0077268"}


id: PBO:0039308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 3, alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0039308"}


id: PBO:0044761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43 pseudogene 2","termid":"PBO:0044761"}


id: GO:0050946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthophore differentiation","termid":"GO:0050938"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of xanthophore differentiation","synonyms":[{"name":"activation of xanthophore differentiation","type":"narrow"},{"name":"stimulation of xanthophore differentiation","type":"narrow"},{"name":"up regulation of xanthophore differentiation","type":"exact"},{"name":"up-regulation of xanthophore differentiation","type":"exact"},{"name":"upregulation of xanthophore differentiation","type":"exact"}],"termid":"GO:0050946"}


id: PBO:0029563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_DNA_damage_checkpoint_signaling","termid":"PBO:0029563"}


id: PATO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001766 cellular polarity (obsolete PATO:0001766)","termid":"PATO:0001766"}


id: FYPO:0002172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during nitrogen starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of nitrogen starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to nitrogen starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen depletion gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of nitrogen starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of nitrogen starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased nitrogen starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002172"}


id: GO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of epithelial to mesenchymal transition that contributes to the shaping of the semicircular canal by effectively removing epithelial cells from the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by epithelial to mesenchymal transition","termid":"GO:0060886"}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: PBO:0055874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC3 divergent transcript","termid":"PBO:0055874"}


id: PR:Q9URM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G5.05 gene.","definition_xrefs":["UniProtKB:Q9URM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.05","synonyms":[{"name":"Spom972h-SPBC2G5.05","type":"exact"},{"name":"TK (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URM2"}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: PBO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036156"}


id: PBO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 1, pseudogene","termid":"PBO:0044478"}


id: GO:0031264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of signaling proteins with a death receptor upon ligand binding. The complex includes procaspases and death domain-containing proteins in addition to the ligand-bound receptor, and may control the activation of caspases 8 and 10.","definition_xrefs":["PMID:12628743","PMID:8521815","PMID:12655293","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"death-inducing signaling complex","secondary_identifiers":["Wikipedia:Death-inducing_signaling_complex"],"synonyms":[{"name":"DISC","type":"exact"},{"name":"DISC protein complex","type":"exact"},{"name":"death receptor-induced signaling complex","type":"exact"},{"name":"death receptor-induced signalling complex","type":"exact"},{"name":"death-inducing signalling complex","type":"exact"}],"termid":"GO:0031264"}


id: GO:0018913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylbenzene metabolic process","termid":"GO:0018915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic ethylbenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ethb"],"synonyms":[{"name":"anaerobic ethylbenzene metabolism","type":"exact"}],"termid":"GO:0018913"}


id: PBO:0077960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-1","termid":"PBO:0077960"}


id: GO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-(1->4)-linked D-xylose backbone decorated with glucuronic acid side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucuronoxylan metabolic process","synonyms":[{"name":"glucuronoxylan metabolism","type":"exact"}],"termid":"GO:0010413"}


id: PBO:0091096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Dhm2","termid":"PBO:0091096"}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: GO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in outflow tract morphogenesis","termid":"GO:0061325"}


id: GO:1902728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle satellite cell proliferation","termid":"GO:1902724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth factor dependent skeletal muscle satellite cell proliferation","termid":"GO:1902728"}


id: PBO:0053546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 552","termid":"PBO:0053546"}


id: PBO:0067648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 823, pseudogene","termid":"PBO:0067648"}


id: SO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_amino_acid_feature","synonyms":[{"name":"modified amino acid feature","type":"exact"}],"termid":"SO:0001385"}


id: GO:0008700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate.","definition_xrefs":["EC:4.1.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"},{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-2-oxoglutarate aldolase activity","secondary_identifiers":["MetaCyc:4OH2OXOGLUTARALDOL-RXN","Reactome:R-HSA-6784423","RHEA:18169"],"synonyms":[{"name":"2-keto-4-hydroxybutyrate aldolase activity","type":"related"},{"name":"2-keto-4-hydroxyglutarate aldolase activity","type":"related"},{"name":"2-keto-4-hydroxyglutaric aldolase activity","type":"related"},{"name":"2-oxo-4-hydroxyglutarate aldolase activity","type":"related"},{"name":"2-oxo-4-hydroxyglutaric aldolase activity","type":"related"},{"name":"4-hydroxy-2-ketoglutarate aldolase activity","type":"related"},{"name":"4-hydroxy-2-ketoglutaric aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxoglutarate glyoxylate-lyase (pyruvate-forming)","type":"related"},{"name":"4-hydroxy-2-oxoglutarate glyoxylate-lyase activity","type":"related"},{"name":"DL-4-hydroxy-2-ketoglutarate aldolase activity","type":"related"},{"name":"KHG-aldolase activity","type":"related"},{"name":"hydroxyketoglutarate aldolase activity","type":"related"},{"name":"hydroxyketoglutaric aldolase activity","type":"related"}],"termid":"GO:0008700"}


id: PBO:0056857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA2 antisense RNA 1","termid":"PBO:0056857"}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PBO:0049609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 12","termid":"PBO:0049609"}


id: PBO:0075483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 1","termid":"PBO:0075483"}


id: GO:0018076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal lysine of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}


id: GO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAP kinase activity","synonyms":[{"name":"down regulation of MAPK activity","type":"exact"},{"name":"down-regulation of MAPK activity","type":"exact"},{"name":"downregulation of MAPK activity","type":"exact"},{"name":"inhibition of MAPK activity","type":"narrow"},{"name":"negative regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043407"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["PubMed:16565085","RESID:AA0557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: GO:0032102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to external stimulus","synonyms":[{"name":"down regulation of response to external stimulus","type":"exact"},{"name":"down-regulation of response to external stimulus","type":"exact"},{"name":"downregulation of response to external stimulus","type":"exact"},{"name":"inhibition of response to external stimulus","type":"narrow"}],"termid":"GO:0032102"}


id: PBO:0027886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_dimethylation","termid":"PBO:0027886"}


id: GO:0106109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (R)-mevalonic acid biosynthetic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:24296663","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of (R)-mevalonic acid biosynthetic process","termid":"GO:0106107"},{"relation_name":"positively_regulates","term_name":"(R)-mevalonic acid biosynthetic process","termid":"GO:1901737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of (R)-mevalonic acid biosynthetic process","termid":"GO:0106109"}


id: PBO:0065858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB15, member RAS oncogene family","termid":"PBO:0065858"}


id: PBO:0082159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenine phosphoribosyltransferase; catalyzes the formation of AMP from adenine and 5-phosphoribosylpyrophosphate; involved in the salvage pathway of purine nucleotide biosynthesis; APT1 has a paralog, APT2, that arose from the whole genome duplication","termid":"PBO:0082159"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:10891884","PMID:15560120","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904467","GO:0042534"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: GO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An specialized occluding junction where three epithelial cells meet. It is composed of a branching network of sealing strands that run perpendicularly to the bicellular tight junction at the point of contact between three epithelial cells in an epithelial sheet.","definition_xrefs":["GOC:dk","GOC:dph","PMID:25822906","PMID:22520461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tricellular tight junction","termid":"GO:0061689"}


id: GO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}


id: PBO:0036467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3 (predicted)","termid":"PBO:0036467"}


id: GO:0009515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Appressed thylakoid membranes that are part of a granum (stacked regions). A characteristic of these appressed regions is the preferential localization of photosystem II.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"granum","termid":"GO:0009542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"granal stacked thylakoid","synonyms":[{"name":"chloroplast stacked thylakoid","type":"exact"}],"termid":"GO:0009515"}


id: PBO:0087889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor of nitric oxide oxidase; basic leucine zipper (bZIP) transcription factor; neighboring gene, YOL029C, created by frame-shift at position 708, corresponds to C-terminal part of YAP7 orthologs in other species; YAP7 has a paralog, YAP5, that arose from the whole genome duplication","termid":"PBO:0087889"}


id: PBO:0054144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1511","termid":"PBO:0054144"}


id: GO:1901284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00065","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydromethanopterin metabolic process","termid":"GO:1901283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin degradation","type":"exact"}],"termid":"GO:1901284"}


id: PBO:0005539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec7","termid":"PBO:0005539"}


id: PBO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.6","termid":"PBO:0002629"}


id: GO:2000871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of progesterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of female gonad development","termid":"GO:2000195"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of progesterone secretion","termid":"GO:2000870"},{"relation_name":"negatively_regulates","term_name":"progesterone secretion","termid":"GO:0042701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of progesterone secretion","termid":"GO:2000871"}


id: MOD:00789
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["Unimod:364","URL:http://www.serva.de/products/sheets/39230-E.pdf","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:00789"}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: GO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mannose binding lectin (obsolete GO:0005532)","synonyms":[{"name":"mannose binding lectin","type":"exact"},{"name":"mannose receptor","type":"related"}],"termid":"GO:0005532"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86717,86718,97522,97523],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["EC:2.5.1.58","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-17573","RHEA:13345","Reactome:R-HSA-9647978","Reactome:R-HSA-2530501","GO:0018223"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: FYECO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine absent","termid":"FYECO:0000418"}


id: GO:0102887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-sesquiphellandrene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"beta-sesquiphellandrene synthase activity","secondary_identifiers":["RHEA:32699","MetaCyc:RXN-8430"],"termid":"GO:0102887"}


id: PBO:0084729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein with similarity to Mdm31p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MDM10, MDM12, and MDM34; variation between SK1 and S288C at residues 182 and 262 impacts invasive growth and mitochondrial network structure","termid":"PBO:0084729"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_01149","SJAG_03061","SJAG_03967","SJAG_02057","SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113096,91942,107041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[105006,105166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["GOC:vw","PMID:16721054","PMID:17079683","PMID:10766736","GOC:bhm","PMID:19328067","PMID:7759473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: GO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism senses the number of X chromosomes and autosomes in its genomic complement and responds to it.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:mr","GOC:isa_complete","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"primary sex determination, soma","termid":"GO:0007539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, establishment of X:A ratio","termid":"GO:0007540"}


id: GO:0030653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-lactam antibiotic metabolic process","synonyms":[{"name":"beta-lactam antibiotic metabolism","type":"exact"}],"termid":"GO:0030653"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0052648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 16","termid":"PBO:0052648"}


id: SO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence that has been integrated with foreign sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic","termid":"SO:0000781"}


id: PBO:0029955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_binding","termid":"PBO:0029955"}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: GO:1905063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","GOC:rph","PMID:19088079","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"regulation of VSMC differentiation","type":"exact"},{"name":"regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905063"}


