# terms

id: GO:0010710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen catabolic process","synonyms":[{"name":"regulation of collagen breakdown","type":"exact"},{"name":"regulation of collagen catabolism","type":"exact"},{"name":"regulation of collagen degradation","type":"exact"}],"termid":"GO:0010710"}


id: GO:0072247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric glomerular parietal epithelial cell. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. These cells may also give rise to podocytes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell fate commitment","termid":"GO:0072147"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell fate commitment","termid":"GO:0072315"},{"relation_name":"part_of","term_name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell fate commitment","synonyms":[{"name":"metanephric Bowman's capsule cell fate commitment","type":"exact"}],"termid":"GO:0072247"}


id: GO:0005976
data:
  {"annotated_genes":["SJAG_04184","SJAG_03123","SJAG_01209","SJAG_03057","SJAG_00620","SJAG_00183","SJAG_02222","SJAG_03295","SJAG_02718","SJAG_00424","SJAG_04868","SJAG_04483","SJAG_03851","SJAG_00485","SJAG_01376","SJAG_01787","SJAG_01288","SJAG_05285","SJAG_02131","SJAG_03646","SJAG_01017","SJAG_05001","SJAG_04666","SJAG_04963","SJAG_02916","SJAG_01835","SJAG_01888","SJAG_01561","SJAG_04864","SJAG_04771","SJAG_04509","SJAG_02590","SJAG_02478","SJAG_04073","SJAG_04878","SJAG_03705","SJAG_03013","SJAG_01171","SJAG_00876","SJAG_04236","SJAG_00115","SJAG_04327","SJAG_02649","SJAG_02076","SJAG_00667","SJAG_06309","SJAG_02178","SJAG_01028","SJAG_02446","SJAG_00218","SJAG_02192","SJAG_04668","SJAG_01290","SJAG_01783","SJAG_01426","SJAG_02278","SJAG_04462","SJAG_00771","SJAG_03587","SJAG_00963","SJAG_01963","SJAG_03444","SJAG_01453","SJAG_03824","SJAG_01089","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86761,90351,98584,112662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96741,89468,91388,101883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[110499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[107439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"},{"annotations":[90599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[84894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87912,97636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[87736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[115184,85272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[90163,96266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[90165,107441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072000"},{"annotations":[110121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046379"},{"annotations":[105209,110500,100300,113873,85323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[105439,84266,87727,102224,109293,103911,111931,87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98767,104746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[91241,98073,104202,98072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[102226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[84883,102819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[98076,84478,102820,104204,98077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[105034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[99433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[114559,110558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[86254,96406,104782,105907,94741,93744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[77841,87092],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[111730,92248,83646,104524,92247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[88562],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83714,88565],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84094],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[86934,98975,101463,113986,88551,88567],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[88571,98977,91073,85613],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"macromolecule metabolic 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metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044263"],"synonyms":[{"name":"glycan metabolic process","type":"narrow"},{"name":"glycan metabolism","type":"narrow"},{"name":"multicellular organismal polysaccharide metabolic process","type":"narrow"},{"name":"polysaccharide metabolism","type":"exact"}],"termid":"GO:0005976","terms_by_termid":{"GO:0000272":null,"GO:0005977":null,"GO:0005978":null,"GO:0005980":null,"GO:0006078":null,"GO:0009251":null,"GO:0030979":null,"GO:0030995":null,"GO:0032951":null,"GO:0034217":null,"GO:0034232":null,"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0045719":null,"GO:0046379":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0061723":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0072000":null,"GO:0072316":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: GO:0035282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis.","definition_xrefs":["PMID:10611687","PMID:9706689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segmentation","secondary_identifiers":["Wikipedia:Segmentation_(biology)"],"termid":"GO:0035282"}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: PATO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the midline of the jaw to the side opposite the midline.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesiodistally compressed","termid":"PATO:0005018"}


id: PBO:0083886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferro-O2-oxidoreductase; multicopper oxidase that oxidizes ferrous (Fe2+) to ferric iron (Fe3+) for subsequent cellular uptake by transmembrane permease Ftr1p; required for high-affinity iron uptake and involved in mediating resistance to copper ion toxicity, belongs to class of integral membrane multicopper oxidases; protein abundance increases in response to DNA replication stress","termid":"PBO:0083886"}


id: PBO:0014598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor activator Rep2","termid":"PBO:0014598"}


id: GO:2000651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"positive regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000651"}


id: SO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The leftmost segment of homology in the HML and MAT mating loci, but not present in HMR.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"W_region","secondary_identifiers":["SO:0002000"],"synonyms":[{"name":"W-region","type":"exact"}],"termid":"SO:0002024"}


id: PBO:0067331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 423, pseudogene","termid":"PBO:0067331"}


id: PBO:0056646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 7","termid":"PBO:0056646"}


id: SO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a duplication, which is an insertion which derives from, or is identical in sequence to, nucleotides present at a known location in the genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication_attribute","synonyms":[{"name":"duplication attribute","type":"related"}],"termid":"SO:0001523"}


id: PBO:0053562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 572","termid":"PBO:0053562"}


id: PBO:0083406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032W-A","termid":"PBO:0083406"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: GO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,3-diol + NAD+ = 3-hydroxypropanal + NADH + H+.","definition_xrefs":["EC:1.1.1.202","MetaCyc:13-PROPANEDIOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1,3-propanediol dehydrogenase activity","secondary_identifiers":["RHEA:23188"],"synonyms":[{"name":"1,3-PD:NAD+ oxidoreductase activity","type":"related"},{"name":"1,3-propanediol oxidoreductase activity","type":"related"},{"name":"1,3-propanediol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-hydroxypropionaldehyde reductase activity","type":"related"},{"name":"propane-1,3-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047516"}


id: PR:Q10428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- par1 gene.","definition_xrefs":["UniProtKB:Q10428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta 1 isoform (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.02","synonyms":[{"name":"PP2A, B subunit, B' delta 1 isoform (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-par1","type":"exact"}],"termid":"PR:Q10428"}


id: PBO:0063977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 11","termid":"PBO:0063977"}


id: PBO:0017824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent DNA helicase Swr1","termid":"PBO:0017824"}


id: PBO:0054265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1650","termid":"PBO:0054265"}


id: MOD:00673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to a methylated asparagine, such as N4-methyl-L-asparagine, or N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated asparagine","synonyms":[{"name":"MeAsn","type":"exact"}],"termid":"MOD:00673"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["UniProtKB:P87179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: PBO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRR-NUC nuclease associated domain, human MTMR15 homolog","termid":"PBO:0003425"}


id: GO:1990456
data:
  {"annotated_genes":["SJAG_01116","SJAG_03710","SJAG_04370","SJAG_01305","SJAG_01929","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87066,101966,103154,103656,103785,112729],"is_not":false,"summary":null,"term":"GO:1990456"}]},"cv_name":"biological_process","definition":"The attachment of a mitochondrion and an endoplasmic reticulum via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140056"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tethering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion-ER attachment","type":"exact"},{"name":"mitochondrion-ER membrane tethering","type":"exact"},{"name":"mitochondrion-ER tethering","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum attachment","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum tethering","type":"exact"}],"termid":"GO:1990456","terms_by_termid":{"GO:1990456":null}}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: FYPO:0004970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated when the cell is subject to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable elongated vegetative cell during phosphate starvation","synonyms":[{"name":"elongated viable vegetative cell during phosphate starvation","type":"exact"},{"name":"viable elongated cell during phosphate starvation during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during cellular response to phosphate starvation","type":"exact"},{"name":"viable elongated vegetative cell during phosphate starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004970"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0087208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; required for wybutosine formation in phenylalanine-accepting tRNA; member of the seven beta-strand family","termid":"PBO:0087208"}


id: GO:0090651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytoplasm located at the apical side of the cell. Used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:17494872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apical cytoplasm","termid":"GO:0090651"}


id: PBO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 8","termid":"PBO:0047481"}


id: PBO:0054143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1509","termid":"PBO:0054143"}


id: GO:0018650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene + NADPH + FADH + O2 = NADP+ + FAD+ + H2O + styrene oxide.","definition_xrefs":["UM-BBD_reactionID:r0225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"styrene monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018650"}


id: FYPO:0002075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population at high temperature (obsolete FYPO:0002075)","termid":"FYPO:0002075"}


id: PBO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IB","termid":"PBO:0061547"}


id: FYPO:0004216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0008179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me1 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004216"}


id: PBO:0017047
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PCNA","termid":"PBO:0017047"}


id: GO:0001725
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65297],"is_not":false,"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.","definition_xrefs":["PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin","termid":"GO:0042641"},{"relation_name":"is_a","term_name":"contractile actin filament bundle","termid":"GO:0097517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"stress fiber","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actin cable","type":"related"},{"name":"stress fibre","type":"exact"}],"termid":"GO:0001725","terms_by_termid":{"GO:0001725":null}}


id: FYPO:0004303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished phosphatase activity","synonyms":[{"name":"phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004303"}


id: GO:0060759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokine stimulus","termid":"GO:0060759"}


id: GO:0043481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of the pigment anthocyanin in a particular location in a tissue, occurring in response to a UV light stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation in tissues in response to UV light","termid":"GO:0043479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}


id: GO:0098791
data:
  {"annotated_genes":["SJAG_03278","SJAG_01488","SJAG_04770","SJAG_03670","SJAG_02912","SJAG_03555","SJAG_04338","SJAG_01571","SJAG_02168","SJAG_01276","SJAG_00567","SJAG_01448","SJAG_00669","SJAG_03634","SJAG_04095","SJAG_00330","SJAG_01945","SJAG_05209","SJAG_03756","SJAG_01409","SJAG_04398","SJAG_01516","SJAG_04112","SJAG_00296","SJAG_02525","SJAG_04739","SJAG_04548","SJAG_03347","SJAG_02902","SJAG_03953","SJAG_04358","SJAG_01633","SJAG_04819","SJAG_03663","SJAG_00816","SJAG_01025","SJAG_05330","SJAG_02240","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113070,92190],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[94841],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031985"},{"annotations":[97279,109192,86499,94233],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[92551,106978,87317,91694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005795"},{"annotations":[86500,92191,95629,97280,109193],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[108823],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[101066,114119,94023,83698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[88428,113706,97687,95633,95879,89314,95175,100193,84850,95594,96027,108619,96308,92836,99503,98786,94843,100512,114566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005802"},{"annotations":[89352,86899,103497,87365,91873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"A compartment that consists of a lumen and an enclosing membrane, and is part of the Golgi apparatus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00330":null,"SJAG_00567":null,"SJAG_00669":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi apparatus subcompartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi subcompartment","type":"exact"}],"termid":"GO:0098791","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0005802":null,"GO:0031985":null,"GO:0032588":null,"GO:0140497":null}}


id: PBO:0085494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; contributes to regulation of telomeric silencing; sequestered to the nucleolus under stress conditions","termid":"PBO:0085494"}


id: PBO:0040422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d2","termid":"PBO:0040422"}


id: PBO:0079199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 2","termid":"PBO:0079199"}


id: PBO:0025448
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Acetylglutamate Synthetase deficiency","termid":"PBO:0025448"}


id: GO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction sulfoquinovose = 6-deoxy-6-sulfofructose.","definition_xrefs":["GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"sulfoquinovose isomerase activity","termid":"GO:0061593"}


id: PBO:0018163
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSO1","termid":"PBO:0018163"}


id: GO:0055062
data:
  {"annotated_genes":["SJAG_03624","SJAG_04870","SJAG_05325","SJAG_01713","SJAG_00244","SJAG_03061","SJAG_04242","SJAG_01000","SJAG_00232","SJAG_03519","SJAG_03644"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96175,84904,98720,98719,103711,110714,88279,93331,98721,105168,103831,111160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of phosphate ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00244":null,"SJAG_01000":null,"SJAG_01713":null,"SJAG_03061":null,"SJAG_03519":null,"SJAG_03624":null,"SJAG_03644":null,"SJAG_04242":null,"SJAG_04870":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"phosphate ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Pi homeostasis","type":"exact"},{"name":"phosphate homeostasis","type":"broad"}],"termid":"GO:0055062","terms_by_termid":{"GO:0030643":null}}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: GO:2001075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"},{"relation_name":"negatively_regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric ureteric bud development","termid":"GO:2001075"}


id: SO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A translocation where the regions involved are from the same chromosome.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_translocation","termid":"SO:0002061"}


id: PBO:0053456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 408","termid":"PBO:0053456"}


id: GO:0047479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced glutathione + glutathionylspermidine + ATP = trypanothione + ADP + phosphate.","definition_xrefs":["MetaCyc:6.3.1.9-RXN","EC:6.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"trypanothione synthase activity","secondary_identifiers":["RHEA:21532"],"synonyms":[{"name":"TSR synthetase activity","type":"related"},{"name":"glutathionylspermidine:glutathione ligase (ADP-forming)","type":"related"}],"termid":"GO:0047479"}


id: GO:0052074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host salicylic acid-mediated defense response (obsolete GO:0052074)","synonyms":[{"name":"activation by symbiont of host salicylic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of host SA-mediated defense response","type":"narrow"},{"name":"induction by organism of host salicylic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of host SA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host salicylic acid-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052074"}


id: PBO:0066998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL2","termid":"PBO:0066998"}


id: GO:0051817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or processes of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of process of other organism involved in symbiotic interaction (obsolete GO:0051817)","synonyms":[{"name":"modification of morphology or physiology of other organism during symbiotic interaction","type":"related"},{"name":"modification of morphology or physiology of other organism involved in symbiotic interaction","type":"related"},{"name":"modulation of biological process of other organism involved in symbiotic interaction","type":"related"},{"name":"modulation of morphology or physiology of other organism during symbiotic interaction","type":"related"},{"name":"regulation of morphology of other organism during symbiotic interaction","type":"narrow"},{"name":"regulation of morphology or physiology of other organism during symbiotic interaction","type":"related"},{"name":"regulation of physiological process in other organism during symbiotic interaction","type":"narrow"},{"name":"regulation of physiology of other organism during symbiotic interaction","type":"narrow"}],"termid":"GO:0051817"}


id: GO:1990982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The immune response against a previously encountered antigen being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526"],"gene_count":0,"genotype_count":0,"name":"obsolete Immune memory response (obsolete GO:1990982)","termid":"GO:1990982"}


id: GO:0004784
data:
  {"annotated_genes":["SJAG_00668","SJAG_04788","SJAG_03303","SJAG_01734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85165,96281,100136,106274],"is_not":false,"summary":null,"term":"GO:0004784"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.","definition_xrefs":["EC:1.15.1.1","GOC:vw","PMID:15064408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_04788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"superoxide dismutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0004785","MetaCyc:SUPEROX-DISMUT-RXN","GO:0008382","GO:0008383","Reactome:R-HSA-3777112","Reactome:R-HSA-1222462","GO:0016954","RHEA:20696","Reactome:R-HSA-3299680","Reactome:R-HSA-3299691","Reactome:R-HSA-1222469","Reactome:R-HSA-3299682"],"synonyms":[{"name":"Cu,Zn-SOD","type":"related"},{"name":"Cu-Zn superoxide dismutase activity","type":"narrow"},{"name":"Fe-SOD","type":"related"},{"name":"Mn, Fe superoxide dismutase","type":"narrow"},{"name":"Mn-SOD","type":"related"},{"name":"SOD","type":"related"},{"name":"SOD-1","type":"related"},{"name":"SOD-2","type":"related"},{"name":"SOD-3","type":"related"},{"name":"SOD-4","type":"related"},{"name":"SODF","type":"related"},{"name":"SODS","type":"related"},{"name":"copper, zinc superoxide dismutase activity","type":"narrow"},{"name":"cuprein","type":"related"},{"name":"cytocuprein","type":"related"},{"name":"erythrocuprein","type":"related"},{"name":"ferrisuperoxide dismutase activity","type":"narrow"},{"name":"hemocuprein","type":"related"},{"name":"hepatocuprein","type":"related"},{"name":"iron superoxide dismutase activity","type":"narrow"},{"name":"iron superoxide oxidoreductase","type":"related"},{"name":"manganese superoxide dismutase activity","type":"narrow"},{"name":"manganese superoxide oxidoreductase","type":"related"},{"name":"nickel superoxide dismutase activity","type":"narrow"},{"name":"nickel superoxide oxidoreductase","type":"related"},{"name":"superoxide dismutase I","type":"related"},{"name":"superoxide dismutase II","type":"related"},{"name":"superoxide:superoxide oxidoreductase activity","type":"exact"},{"name":"zinc superoxide oxidoreductase","type":"related"}],"termid":"GO:0004784","terms_by_termid":{"GO:0004784":null}}


id: GO:1905086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bioluminescence.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rph","PMID:10913092","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"negatively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bioluminescence","synonyms":[{"name":"down regulation of bioluminescence","type":"exact"},{"name":"down-regulation of bioluminescence","type":"exact"},{"name":"downregulation of bioluminescence","type":"exact"},{"name":"inhibition of bioluminescence","type":"narrow"}],"termid":"GO:1905086"}


id: PBO:0030418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_oxidative_stress","termid":"PBO:0030418"}


id: GO:0001565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a phorbol ester and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling","PMID:10506570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"phorbol ester receptor activity","termid":"GO:0001565"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: PBO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 21","termid":"PBO:0071480"}


id: PBO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rad8","termid":"PBO:0000172"}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: PBO:0035916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_astral_microtubules","termid":"PBO:0035916"}


id: GO:0106128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["PMID:23447642","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"negatively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of store-operated calcium entry","termid":"GO:0106128"}


id: GO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:sodium symporter activity","termid":"GO:0005412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"low-affinity glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429567"],"synonyms":[{"name":"low-affinity glucose-sodium cotransporter activity","type":"broad"}],"termid":"GO:0005362"}


id: PBO:0028008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028008"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: GO:0006868
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62780],"is_not":false,"summary":null,"term":"GO:0006868"}]},"cv_name":"biological_process","definition":"The directed movement of glutamine, 2-amino-4-carbamoylbutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glutamine transport","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0015815"],"synonyms":[{"name":"L-glutamine transport","type":"narrow"}],"termid":"GO:0006868","terms_by_termid":{"GO:0006868":null}}


id: PR:000027583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/UnMod","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"Spom-mei2/UnMod","type":"exact"},{"name":"mei2/UnMod","type":"exact"}],"termid":"PR:000027583"}


id: PBO:0064862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 17","termid":"PBO:0064862"}


id: GO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex containing the products of the insect genes Ecdysone receptor (EcR) and ultraspiracle (usp). Binding of ecdysone promotes association between the two subunits, and the receptor complex then initiates molting and metamorphosis by binding DNA and regulating the transcription of target genes.","definition_xrefs":["GOC:bf","PMID:14592980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ecdysone receptor holocomplex","termid":"GO:0008230"}


id: FYPO:0004051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutathione transferase activity","termid":"FYPO:0003981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased glutathione transferase activity during stationary phase","synonyms":[{"name":"increased glutathione transferase activity in stationary phase","type":"exact"}],"termid":"FYPO:0004051"}


id: GO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"positively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium development","termid":"GO:0075311"}


id: GO:0009820
data:
  {"annotated_genes":["SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alkaloid metabolism","type":"exact"}],"termid":"GO:0009820","terms_by_termid":{"GO:0006769":null}}


id: PBO:0074649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 38B","termid":"PBO:0074649"}


id: PBO:0050721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 7","termid":"PBO:0050721"}


id: PR:G2TRP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.19","synonyms":[{"name":"Spom972h-tom5","type":"exact"}],"termid":"PR:G2TRP7"}


id: PBO:0073288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 10","termid":"PBO:0073288"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: GO:0036503
data:
  {"annotated_genes":["SJAG_02774","SJAG_03345","SJAG_00931","SJAG_00530","SJAG_00627","SJAG_01051","SJAG_04345","SJAG_02539","SJAG_00681","SJAG_04904","SJAG_01709","SJAG_01854","SJAG_03227","SJAG_04583","SJAG_00766","SJAG_00948","SJAG_00790","SJAG_01585","SJAG_00126","SJAG_01626","SJAG_00131","SJAG_01858","SJAG_01768","SJAG_04429","SJAG_03032","SJAG_07000","SJAG_03153","SJAG_00403","SJAG_04571","SJAG_01134","SJAG_05274","SJAG_03657","SJAG_03841","SJAG_02694","SJAG_04612","SJAG_05022","SJAG_02685","SJAG_00941","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83996,85715,85837,86121,87549,88158,88839,89228,89709,90632,90853,91120,93104,94359,96892,99058,99539,100099,100857,100941,101416,103809,104244,104307,105705,108105,109112,109597,109891,111300,111877,111969,112508,112709,113246],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[85439,89084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[89687,91853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The protein catabolic pathway which targets endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. It begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein modifications necessary for correct substrate transfer (e.g. ubiquitination), transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20940304","PMID:21969857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04571":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated degradation pathway","type":"related"},{"name":"endoplasmic reticulum-associated degradation","type":"exact"},{"name":"endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"protein degradation by ERAD","type":"exact"}],"termid":"GO:0036503","terms_by_termid":{"GO:0030970":null,"GO:0036503":null,"GO:0097466":null}}


id: GO:0046421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = pyruvate + succinate.","definition_xrefs":["RHEA:16809","EC:4.1.3.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylisocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00409","MetaCyc:METHYLISOCITRATE-LYASE-RXN"],"synonyms":[{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase (succinate-forming)","type":"related"},{"name":"(2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate pyruvate-lyase activity","type":"related"},{"name":"2-methylisocitrate lyase activity","type":"exact"},{"name":"MICL","type":"related"}],"termid":"GO:0046421"}


id: GO:1903607
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90574,103607],"is_not":false,"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytochrome c.","definition_xrefs":["PMID:19721088","GO_REF:0000068","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome biosynthetic process","termid":"GO:1903605"},{"relation_name":"is_a","term_name":"cytochrome c metabolic process","termid":"GO:1903606"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c anabolism","type":"exact"},{"name":"cytochrome c biosynthesis","type":"exact"},{"name":"cytochrome c formation","type":"exact"},{"name":"cytochrome c synthesis","type":"exact"}],"termid":"GO:1903607","terms_by_termid":{"GO:1903607":null}}


id: PBO:0053533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 534","termid":"PBO:0053533"}


id: GO:2000002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"negatively_regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"negative regulation of DNA damage checkpoint","synonyms":[{"name":"negative regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000002"}


id: PBO:0056782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member D","termid":"PBO:0056782"}


id: PR:Q10055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic initiation factor 4A-III that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24031:SF143","OMA:SCHPO00098","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase fal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.10","secondary_identifiers":["UniProtKB:Q10055"],"synonyms":[{"name":"Spom972h-EIF4A3","type":"exact"}],"termid":"PR:Q10055"}


id: GO:1990346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:bhm","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BID-BCL-xl complex","termid":"GO:1990346"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: PBO:0064997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM4 antisense RNA 1","termid":"PBO:0064997"}


id: PBO:0041192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1B-PAK6 readthrough","termid":"PBO:0041192"}


id: PR:O43008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crs1 gene.","definition_xrefs":["UniProtKB:O43008","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin crs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.09c","synonyms":[{"name":"Spom972h-crs1","type":"exact"},{"name":"cyclin-like protein regulated via splicing 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 17 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43008"}


id: GO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the telomere.","definition_xrefs":["GOC:jid","PMID:9635193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA recombination at telomere","synonyms":[{"name":"down regulation of telomeric recombination at telomere","type":"exact"},{"name":"down-regulation of telomeric recombination at telomere","type":"exact"},{"name":"downregulation of telomeric recombination at telomere","type":"exact"},{"name":"inhibition of telomeric recombination at telomere","type":"narrow"},{"name":"negative regulation of telomeric recombination at telomere","type":"exact"},{"name":"suppression of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0048239"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0000138","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: MOD:01213
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an iodoacetamide derivatized histidine, either 1'- or 3'-(carboxamidolmethyl)histidine.","definition_xrefs":["PubMed:11510821","OMSSA:28","PubMed:12422359","PubMed:15627961","PubMed:2026710","Unimod:4#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized histidine","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidometylh","type":"exact"}],"termid":"MOD:01213"}


id: FYPO:0001599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which asparagine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal asparagine import","synonyms":[{"name":"normal L-asparagine import","type":"exact"},{"name":"normal L-asparagine import across plasma membrane","type":"exact"},{"name":"normal asparagine import during mitotic cell cycle","type":"related"},{"name":"normal asparagine import during vegetative growth","type":"exact"},{"name":"normal asparagine import into cell","type":"exact"},{"name":"normal asparagine uptake","type":"exact"}],"termid":"FYPO:0001599"}


id: GO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to a galactoside acceptor molecule, usually an N-glycan, to form an alpha(1,6)-fucosylated galactoside.","definition_xrefs":["PMID:12413479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->6)-fucosyltransferase activity","termid":"GO:0046921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactoside 6-L-fucosyltransferase activity","termid":"GO:0046702"}


id: GO:0102526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 8-desmethylnovobiocic acid = S-adenosyl-L-homocysteine + novobiocic acid + H+.","definition_xrefs":["EC:2.1.1.284","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"8-demethylnovobiocic acid C8-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14543","RHEA:36651"],"termid":"GO:0102526"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: GO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075082)","termid":"GO:0075082"}


id: GO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An NADPH regeneration process that contributes to the light reactions of photosynthesis. The light reactions of photosynthesis use energy from photons to generate high-energy electrons. These electrons are used directly to reduce NADP+ to NADPH. NADPH is a relatively stable molecule and can pass on its hydrogen atom to other molecules in chemical reactions.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716746840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"photosynthetic NADP+ reduction","termid":"GO:0009780"}


id: FYECO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which magnesium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Mg ions","synonyms":[{"name":"magnesium ions added","type":"exact"}],"termid":"FYECO:0000038"}


id: PBO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase (predicted)","termid":"PBO:0001862"}


id: PBO:0074948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111B","termid":"PBO:0074948"}


id: PBO:0040066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP19 pseudogene 2","termid":"PBO:0040066"}


id: PR:P36594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02936","PANTHER:PTHR19376:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.12","secondary_identifiers":["UniProtKB:P36594"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2A","type":"exact"}],"termid":"PR:P36594"}


id: PBO:0025505
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesteryl ester storage disease","termid":"PBO:0025505"}


id: FYPO:0001014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal membrane organization during nitrogen starvation","synonyms":[{"name":"abnormal cellular membrane organization during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organisation during nitrogen starvation","type":"exact"},{"name":"abnormal membrane organization during nitrogen depletion","type":"exact"},{"name":"abnormal membrane organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001014"}


id: GO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"}


id: GO:1990938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own aspartate amino acid residues, or an aspartate residue on an identical protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:26134396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid phosphorylation","termid":"GO:0018217"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid autophosphorylation","synonyms":[{"name":"aspartyl autophosphorylation","type":"exact"},{"name":"peptidyl-aspartate autophosphorylation","type":"exact"}],"termid":"GO:1990938"}


id: PBO:0064487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase theta","termid":"PBO:0064487"}


id: PBO:0065128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 1","termid":"PBO:0065128"}


id: GO:2000763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in norepinephrine biosynthetic process.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in norepinephrine biosynthetic process (obsolete GO:2000763)","synonyms":[{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in levarterenol biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in noradrenaline biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine anabolism","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthesis","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine biosynthetic process","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine formation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in norepinephrine synthesis","type":"exact"}],"termid":"GO:2000763"}


id: PBO:0062352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 3 pseudogene","termid":"PBO:0062352"}


id: PBO:0076232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suv3 like RNA helicase","termid":"PBO:0076232"}


id: PBO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data","termid":"PBO:0086010"}


id: GO:0097586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt4p.","definition_xrefs":["GOC:bhm","GOC:jd","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005789","GO:0005783","GO:0032991"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p homodimer complex","synonyms":[{"name":"Pmt4p-Pmt4p complex","type":"narrow"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p dimer","type":"exact"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p-Pmt4p dimer complex","type":"exact"}],"termid":"GO:0097586"}


id: PBO:0029263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_cell_with_central_constriction","termid":"PBO:0029263"}


id: GO:2000415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of thymocyte migration","termid":"GO:2000412"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"positively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"positive regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"positive regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"positive regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"positive regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000415"}


id: PBO:0064367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 1","termid":"PBO:0064367"}


id: GO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic M phase","synonyms":[{"name":"M phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051327"}


id: PATO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"magnitude","termid":"PATO:0002016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased magnitude","synonyms":[{"name":"high magnitude","type":"exact"}],"termid":"PATO:0002017"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: GO:0015210
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84640],"is_not":false,"summary":null,"term":"GO:0015210"},{"annotations":[91681,84641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of uracil, 2,4-dioxopyrimidine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"uracil transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil/uridine permease activity","type":"related"}],"termid":"GO:0015210","terms_by_termid":{"GO:0015210":null,"GO:0015505":null}}


id: GO:1902045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Fas signaling pathway","termid":"GO:1902044"},{"relation_name":"negatively_regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Fas signaling pathway","synonyms":[{"name":"down regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down regulation of CD95 signaling pathway","type":"exact"},{"name":"down regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down regulation of Fas signaling pathway","type":"exact"},{"name":"down regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down regulation of FasL signaling pathway","type":"related"},{"name":"down regulation of FasR signaling pathway","type":"exact"},{"name":"down-regulation of Apo-1 signaling pathway","type":"exact"},{"name":"down-regulation of CD95 signaling pathway","type":"exact"},{"name":"down-regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"down-regulation of Fas receptor signaling pathway","type":"exact"},{"name":"down-regulation of Fas signaling pathway","type":"exact"},{"name":"down-regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"down-regulation of FasL signaling pathway","type":"related"},{"name":"down-regulation of FasR signaling pathway","type":"exact"},{"name":"downregulation of Apo-1 signaling pathway","type":"exact"},{"name":"downregulation of CD95 signaling pathway","type":"exact"},{"name":"downregulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"downregulation of Fas receptor signaling pathway","type":"exact"},{"name":"downregulation of Fas signaling pathway","type":"exact"},{"name":"downregulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"downregulation of FasL signaling pathway","type":"related"},{"name":"downregulation of FasR signaling pathway","type":"exact"},{"name":"inhibition of Apo-1 signaling pathway","type":"narrow"},{"name":"inhibition of CD95 signaling pathway","type":"narrow"},{"name":"inhibition of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas receptor signaling pathway","type":"narrow"},{"name":"inhibition of Fas signaling pathway","type":"narrow"},{"name":"inhibition of Fas-FasL signaling pathway","type":"narrow"},{"name":"inhibition of FasL signaling pathway","type":"related"},{"name":"inhibition of FasR signaling pathway","type":"narrow"},{"name":"negative regulation of Apo-1 signaling pathway","type":"exact"},{"name":"negative regulation of CD95 signaling pathway","type":"exact"},{"name":"negative regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"negative regulation of Fas receptor signaling pathway","type":"exact"},{"name":"negative regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"negative regulation of FasL signaling pathway","type":"related"},{"name":"negative regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902045"}


id: GO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"activation of pyrimidine base metabolic process","type":"narrow"},{"name":"positive regulation of pyrimidine base metabolic process","type":"exact"},{"name":"positive regulation of pyrimidine base metabolism","type":"exact"},{"name":"stimulation of pyrimidine base metabolic process","type":"narrow"},{"name":"up regulation of pyrimidine base metabolic process","type":"exact"},{"name":"up-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"upregulation of pyrimidine base metabolic process","type":"exact"}],"termid":"GO:0045985"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: FYPO:0002276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein degradation","synonyms":[{"name":"increased protein breakdown","type":"exact"},{"name":"increased protein catabolic process","type":"exact"},{"name":"increased protein catabolism","type":"exact"}],"termid":"FYPO:0002276"}


id: PBO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0000539"}


id: PBO:0056061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 1","termid":"PBO:0056061"}


id: PBO:0028297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_old_growing_cell_tip","termid":"PBO:0028297"}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: GO:1901485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:al","GOC:vw","GOC:TermGenie","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor catabolic process (obsolete GO:1901485)","synonyms":[{"name":"activation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"activation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"activation of transcription factor breakdown","type":"exact"},{"name":"activation of transcription factor catabolic process","type":"narrow"},{"name":"activation of transcription factor catabolism","type":"exact"},{"name":"activation of transcription factor degradation","type":"exact"},{"name":"positive regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"positive regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"positive regulation of transcription factor breakdown","type":"exact"},{"name":"positive regulation of transcription factor catabolism","type":"exact"},{"name":"positive regulation of transcription factor degradation","type":"exact"},{"name":"up regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor breakdown","type":"exact"},{"name":"up regulation of transcription factor catabolic process","type":"exact"},{"name":"up regulation of transcription factor catabolism","type":"exact"},{"name":"up regulation of transcription factor degradation","type":"exact"},{"name":"up-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"up-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor breakdown","type":"exact"},{"name":"up-regulation of transcription factor catabolic process","type":"exact"},{"name":"up-regulation of transcription factor catabolism","type":"exact"},{"name":"up-regulation of transcription factor degradation","type":"exact"},{"name":"upregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"upregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor breakdown","type":"exact"},{"name":"upregulation of transcription factor catabolic process","type":"exact"},{"name":"upregulation of transcription factor catabolism","type":"exact"},{"name":"upregulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901485"}


id: PBO:0053708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 911","termid":"PBO:0053708"}


id: PBO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H","termid":"PBO:0046057"}


id: GO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population by cell division as part of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell proliferation involved in immune response","synonyms":[{"name":"T cell proliferation during immune response","type":"related"},{"name":"T lymphocyte proliferation during immune response","type":"related"},{"name":"T-cell proliferation during immune response","type":"related"},{"name":"T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002309"}


id: PBO:0072379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a pseudogene 5","termid":"PBO:0072379"}


id: PBO:0029972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_hydroxyurea","termid":"PBO:0029972"}


id: GO:0102115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparatyl)-L-lysyl-D-alanyl-D-alanine + ammonium + ATP = H+ + ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-gamma-D-isoglutaminyl-N-(beta-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan asparagine synthase activity","secondary_identifiers":["MetaCyc:RXN-11338"],"termid":"GO:0102115"}


id: GO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a basophil resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the basophil has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"basophil activation","termid":"GO:0045575"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil activation involved in immune response","synonyms":[{"name":"basophil activation during immune response","type":"related"}],"termid":"GO:0002276"}


id: PBO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptionally_regulates","termid":"PBO:0000017"}


id: FYPO:0007983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which some microtubule bundles are not anchored to the nuclear membrane. See PMID:15068790","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"microtubule bundles detached from the nuclear envelope","termid":"FYPO:0007983"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: PBO:0049313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2 (gene/pseudogene)","termid":"PBO:0049313"}


id: PBO:0077611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 2","termid":"PBO:0077611"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: PBO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0000489"}


id: GO:0090183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney development","synonyms":[{"name":"regulation of nephrogenesis","type":"related"}],"termid":"GO:0090183"}


id: PBO:0074699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70I","termid":"PBO:0074699"}


id: GO:0097101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of a blood vessel endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. A blood vessel endothelial cell is an endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels.","definition_xrefs":["GOC:dgh","PMID:21521739","CL:0002139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate specification","termid":"GO:0060847"},{"relation_name":"part_of","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"}


id: GO:0070225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + oxidized cytochrome c = S + reduced cytochrome c.","definition_xrefs":["RHEA:30223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfide dehydrogenase activity","secondary_identifiers":["EC:1.8.2.3","MetaCyc:RXN-8156"],"synonyms":[{"name":"flavocytochrome c sulfide dehydrogenase activity","type":"exact"},{"name":"sulphide dehydrogenase activity","type":"exact"}],"termid":"GO:0070225"}


id: GO:0031639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which inactive plasminogen is processed to active plasmin. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.","definition_xrefs":["PMID:9548733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zymogen activation","termid":"GO:0031638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"plasminogen activation","synonyms":[{"name":"cleavage of plasminogen to plasmin","type":"exact"}],"termid":"GO:0031639"}


id: GO:0048781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyanophore differentiation","termid":"GO:0048781"}


id: PBO:0062325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 7 pseudogene","termid":"PBO:0062325"}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: GO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a DDT stimulus. DDT, dichlorodiphenyltrichloroethane, is a chlorinated hydrocarbon pesticide moderately toxic to humans and other animals.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DDT","synonyms":[{"name":"DDT resistance","type":"related"},{"name":"DDT susceptibility/resistance","type":"related"}],"termid":"GO:0046680"}


id: PBO:0086182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation","termid":"PBO:0086182"}


id: PBO:0109463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-2 host gene","termid":"PBO:0109463"}


id: PBO:0028871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_tail_length","termid":"PBO:0028871"}


id: PBO:0039490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A13, pseudogene","termid":"PBO:0039490"}


id: GO:0048243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system.","definition_xrefs":["GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"norepinephrine secretion","synonyms":[{"name":"noradrenaline secretion","type":"exact"}],"termid":"GO:0048243"}


id: PBO:0004553
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.-","termid":"PBO:0004553"}


id: GO:0046025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + precorrin-6Y = 2 S-adenosyl-L-homocysteine + precorrin-8X + CO2.","definition_xrefs":["EC:2.1.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating) activity","secondary_identifiers":["RHEA:17477","MetaCyc:2.1.1.132-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:1-precorrin-6Y C5,15-methyltransferase (C-12-decarboxylating)","type":"related"},{"name":"precorrin-6 methyltransferase activity","type":"broad"},{"name":"precorrin-6Y methylase activity","type":"broad"}],"termid":"GO:0046025"}


id: PBO:0068791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 28, pseudogene","termid":"PBO:0068791"}


id: PBO:0087698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; phosphorylated by Cdc28p; mutation in the human Orc6p is linked to Meier-Gorlin syndrome","termid":"PBO:0087698"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: GO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons into, out of, within or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter activity (obsolete GO:0005489)","synonyms":[{"name":"cytochrome b","type":"related"},{"name":"cytochrome b5","type":"related"},{"name":"cytochrome c3 (tetraheme)","type":"related"},{"name":"cytochrome c554","type":"related"},{"name":"cytochrome c7 (triheme)","type":"related"},{"name":"cytochrome d","type":"related"},{"name":"diheme class I cytochrome c","type":"related"},{"name":"Rieske iron-sulfur protein","type":"related"},{"name":"class I cytochrome c","type":"related"},{"name":"class II cytochrome c","type":"related"},{"name":"class III cytochrome c","type":"related"},{"name":"class IIa cytochrome c","type":"related"},{"name":"class IIb cytochrome c","type":"related"},{"name":"class IV cytochrome c","type":"related"},{"name":"electron transfer carrier","type":"related"},{"name":"electron transporter activity","type":"exact"},{"name":"flavin-containing electron transporter","type":"related"},{"name":"flavodoxin","type":"related"},{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"related"},{"name":"monoheme class I cytochrome c","type":"related"},{"name":"nonaheme cytochrome c","type":"related"},{"name":"respiratory chain cytochrome b6","type":"related"}],"termid":"GO:0005489"}


id: PATO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer by virtue of the cessation of the bearer's life.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dead","termid":"PATO:0001422"}


id: GO:0031177
data:
  {"annotated_genes":["SJAG_00869","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90245,97327],"is_not":false,"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphopantetheine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031177","terms_by_termid":{"GO:0031177":null}}


id: PBO:0079903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein pseudogene 1","termid":"PBO:0079903"}


id: GO:0060786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation that contributes to the maintenance of a steady state of a cell type within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in tissue homeostasis","termid":"GO:0060786"}


id: PBO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDNK gluconokinase","termid":"PBO:0050883"}


id: PBO:0091183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf307","termid":"PBO:0091183"}


id: PBO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin binding protein 1","termid":"PBO:0045523"}


id: PBO:0029995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation_index","termid":"PBO:0029995"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: PBO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin independence factor Cif1","termid":"PBO:0005156"}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: PBO:0069100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 347, pseudogene","termid":"PBO:0069100"}


id: PBO:0086915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication","termid":"PBO:0086915"}


id: GO:0000439
data:
  {"annotated_genes":["SJAG_00512","SJAG_01207","SJAG_00901","SJAG_00758","SJAG_00995","SJAG_04368","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86058,86426,88314,99280,104612,105113,111249],"is_not":false,"summary":null,"term":"GO:0000439"}]},"cv_name":"cellular_component","definition":"The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.","definition_xrefs":["PMID:23028141","GOC:ew","PMID:17215295","PMID:14500720","PMID:22572993","GOC:krc","PMID:22308316","PMID:7813015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_04368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIH core complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000441"],"synonyms":[{"name":"SSL2-core TFIIH complex","type":"exact"},{"name":"core TFIIH complex","type":"exact"}],"termid":"GO:0000439","terms_by_termid":{"GO:0000439":null}}


id: GO:0071281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron ion","synonyms":[{"name":"cellular response to iron","type":"exact"}],"termid":"GO:0071281"}


id: PBO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p21.2)","termid":"PBO:0047852"}


id: PBO:0075042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-5","termid":"PBO:0075042"}


id: PBO:0051130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-26","termid":"PBO:0051130"}


id: GO:0140442
data:
  {"annotated_genes":["SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91397],"is_not":false,"summary":null,"term":"GO:0140442"}]},"cv_name":"molecular_function","definition":"Binding to hydrogen peroxide (H2O2) and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:20919928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"peroxide sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140442","terms_by_termid":{"GO:0140442":null}}


id: PBO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 1","termid":"PBO:0052633"}


id: PR:O43011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidyl-tRNA synthetase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11476:SF0","OMA:SCHPO03718","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.12","secondary_identifiers":["UniProtKB:O43011"],"synonyms":[{"name":"HisRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HARS","type":"exact"},{"name":"histidyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43011"}


id: PBO:0028249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cytoskeleton","termid":"PBO:0028249"}


id: GO:0004851
data:
  {"annotated_genes":["SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111542],"is_not":false,"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + uroporphyrin III = 2 S-adenosyl-L-homocysteine + precorrin-2.","definition_xrefs":["EC:2.1.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"uroporphyrin-III C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:32459","MetaCyc:UROPORIIIMETHYLTRANSA-RXN"],"synonyms":[{"name":"CobA","type":"related"},{"name":"CysG","type":"related"},{"name":"S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:uroporphyrinogen-III C-methyltransferase activity","type":"related"},{"name":"SUMT activity","type":"related"},{"name":"SirA","type":"related"},{"name":"adenosylmethionine-uroporphyrinogen III methyltransferase activity","type":"related"},{"name":"urogen III methylase activity","type":"related"},{"name":"uroporphyrinogen III methylase activity","type":"related"},{"name":"uroporphyrinogen methyltransferase activity","type":"related"},{"name":"uroporphyrinogen-III C-methyltransferase activity","type":"related"},{"name":"uroporphyrinogen-III methylase activity","type":"related"},{"name":"uroporphyrinogen-III methyltransferase activity","type":"related"}],"termid":"GO:0004851","terms_by_termid":{"GO:0004851":null}}


id: GO:2000625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA catabolic process","synonyms":[{"name":"regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000625"}


id: PBO:0027196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_spindle_microtubule_fragmentation","termid":"PBO:0027196"}


id: FYPO:0006009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cables than normal during cytokinesis.","definition_xrefs":["PomBase:mah","PMID:26941334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in decreased numbers","termid":"FYPO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"actin cables present in decreased numbers during cytokinesis","synonyms":[{"name":"actin cables present in decreased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in decreased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"actin cables present in reduced numbers during cytokinesis","type":"exact"},{"name":"decreased level of actin cables during cytokinesis","type":"related"},{"name":"fewer actin cables present during cytokinesis","type":"exact"},{"name":"formin-nucleated actin cables present in decreased numbers during cytokinesis","type":"exact"}],"termid":"FYPO:0006009"}


id: GO:1990675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the medial portion of the Golgi complex.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi medial cisterna","termid":"GO:0005797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi medial cisterna membrane","synonyms":[{"name":"Golgi apparatus medial cisterna membrane","type":"exact"},{"name":"medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990675"}


id: GO:0070646
data:
  {"annotated_genes":["SJAG_00795","SJAG_03325","SJAG_05977","SJAG_04948","SJAG_02764","SJAG_00720","SJAG_02341","SJAG_00776","SJAG_03733","SJAG_04011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89024,97436,101411,105128,89139,91434,87600,106466,85809,102612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein modification by small protein removal","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070646","terms_by_termid":{"GO:0000338":null}}


id: GO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + isocitrate = 2-caffeoylisocitrate + CoA.","definition_xrefs":["EC:2.3.1.126","RHEA:20756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate O-dihydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01946","MetaCyc:2.3.1.126-RXN"],"synonyms":[{"name":"caffeoyl-CoA:isocitrate 3-O-(3,4-dihydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047168"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: FYPO:0006060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to septin ring","termid":"FYPO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to septin ring","synonyms":[{"name":"abolished protein localisation to septin ring","type":"exact"},{"name":"abolished protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"protein absent from septin ring","type":"related"},{"name":"protein localization to septin ring abolished","type":"exact"},{"name":"protein localization to septin ring abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006060"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["PMID:20920515","GOC:bf","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of calcium channel activity in another organism","termid":"GO:0035916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium channel activity in another organism","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: PBO:0060466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN channel auxiliary factor 2","termid":"PBO:0060466"}


id: PBO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 6, pseudogene","termid":"PBO:0050820"}


id: PBO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, implicated in rRNA processing from interactions, human TTC27 ortholog","termid":"PBO:0110066"}


id: PBO:0027904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitosis","termid":"PBO:0027904"}


id: PBO:0016952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Meu16","termid":"PBO:0016952"}


id: PBO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IF","termid":"PBO:0060328"}


id: GO:1990559
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86992],"is_not":false,"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11158296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transmembrane transport","termid":"GO:0035349"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990559","terms_by_termid":{"GO:1990559":null}}


id: GO:0018813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-3-enoate-4-benzenoid + H2O = pyruvate + benzaldehyde derivative. Substrates are (3E)-4-(5-amino-2-hydroxy-phenyl)-2-oxo-but-3-ene-1-oic-acid (forms 5-aminosalicylaldehyde) and trans-o-hydroxybenzylidenepyruvate (forms salicylaldehyde).","definition_xrefs":["UM-BBD_enzymeID:e0257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"trans-o-hydroxybenzylidenepyruvate hydratase-aldolase activity","secondary_identifiers":["RHEA:27389","EC:4.1.2.45"],"termid":"GO:0018813"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: PBO:0057015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103b-2","termid":"PBO:0057015"}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: PBO:0073286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 7","termid":"PBO:0073286"}


id: GO:0006988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor (obsolete GO:0006988)","synonyms":[{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"exact"}],"termid":"GO:0006988"}


id: GO:0050413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + D-alanine + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-methylserine.","definition_xrefs":["EC:2.1.2.7","RHEA:10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-alanine 2-hydroxymethyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01225","MetaCyc:D-ALANINE-HYDROXYMETHYLTRANSFERASE-RXN"],"synonyms":[{"name":"2-methylserine hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:D-alanine 2-hydroxymethyltransferase activity","type":"related"},{"name":"D-alanine hydroxymethyltransferase activity","type":"exact"}],"termid":"GO:0050413"}


id: PBO:0086665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus","termid":"PBO:0086665"}


id: PBO:0063783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 8","termid":"PBO:0063783"}


id: GO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.","definition_xrefs":["PMID:17905721","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed trichome differentiation","synonyms":[{"name":"cotton fiber development","type":"narrow"},{"name":"seed hair differentiation","type":"exact"},{"name":"seed trichome development","type":"related"}],"termid":"GO:0090376"}


id: GO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eclosion","synonyms":[{"name":"down regulation of eclosion","type":"exact"},{"name":"down-regulation of eclosion","type":"exact"},{"name":"downregulation of eclosion","type":"exact"},{"name":"inhibition of eclosion","type":"narrow"}],"termid":"GO:0045804"}


id: GO:0010390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a single ubiquitin group.","definition_xrefs":["PMID:17329563"],"gene_count":0,"genotype_count":0,"name":"obsolete histone monoubiquitination (obsolete GO:0010390)","termid":"GO:0010390"}


id: GO:0009225
data:
  {"annotated_genes":["SJAG_04728","SJAG_02648","SJAG_00890","SJAG_01089","SJAG_01443","SJAG_00519","SJAG_02954","SJAG_00978","SJAG_03723","SJAG_01784","SJAG_03818","SJAG_02951","SJAG_02783","SJAG_02950","SJAG_03188","SJAG_01209","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104517,112199,85382,99217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[105734,109850,109861,109843,109851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[110559,114560,105036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006011"},{"annotations":[98815,84726,57736,98916,84388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02178":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleotide-sugar metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar metabolism","type":"exact"}],"termid":"GO:0009225","terms_by_termid":{"GO:0006011":null,"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: PBO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 1","termid":"PBO:0060458"}


id: PBO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member M, pseudogene","termid":"PBO:0046988"}


id: PBO:0068369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 152","termid":"PBO:0068369"}


id: PBO:0034182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-concretizes","termid":"PBO:0034182"}


id: GO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}


id: GO:0061983
data:
  {"annotated_genes":["SJAG_00207","SJAG_00678","SJAG_04271","SJAG_03989","SJAG_00145","SJAG_00666","SJAG_00646","SJAG_04508","SJAG_03090","SJAG_04853","SJAG_00486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84068,89973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[101241,103856,102959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007135"},{"annotations":[84200,107810,109358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"},{"annotations":[98417,96258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[91297],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"A process that coontributes to the second meiotic division. The second meiotic division separates chromatids resulting in a haploid number of chromosomes.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"second meiotic division","type":"exact"}],"termid":"GO:0061983","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null,"GO:1905191":null,"GO:1990950":null}}


id: PBO:0076784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 2","termid":"PBO:0076784"}


id: GO:0051512
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86035,91986,90713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"positively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of unidimensional cell growth","type":"narrow"},{"name":"positive regulation of cell elongation","type":"narrow"},{"name":"stimulation of unidimensional cell growth","type":"narrow"},{"name":"up regulation of unidimensional cell growth","type":"exact"},{"name":"up-regulation of unidimensional cell growth","type":"exact"},{"name":"upregulation of unidimensional cell growth","type":"exact"}],"termid":"GO:0051512","terms_by_termid":{"GO:0051519":null}}


id: PBO:0038692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 3","termid":"PBO:0038692"}


id: GO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["PMID:10388812","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"negatively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of silent mating-type cassette heterochromatin formation","synonyms":[{"name":"negative regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"negative regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0061186"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: GO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelial cell differentiation","synonyms":[{"name":"pulmonary epithelial cell differentiation","type":"related"}],"termid":"GO:0060487"}


id: PBO:0080450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSIG10L antisense RNA 1","termid":"PBO:0080450"}


id: PR:000037030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rho3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom-rho3","type":"exact"}],"termid":"PR:000037030"}


id: PBO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 58","termid":"PBO:0044289"}


id: PBO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk27 (predicted)","termid":"PBO:0003436"}


id: GO:1990585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-beta-L-arabinofuranose + a [protein]-trans-4-hydroxy-L-proline = a protein-O-(beta-L-arabinofuranose)-trans-4-hydroxy-L-proline + UDP + H+.","definition_xrefs":["PMID:24036508","EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyproline O-arabinosyltransferase activity","synonyms":[{"name":"HPAT","type":"exact"}],"termid":"GO:1990585"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: PBO:0081579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 506","termid":"PBO:0081579"}


id: GO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acrosomal membrane","termid":"GO:0002080"}


id: GO:1904105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in gastrulation","synonyms":[{"name":"activation of convergent extension involved in gastrulation","type":"narrow"},{"name":"up regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"up-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"upregulation of convergent extension involved in gastrulation","type":"exact"}],"termid":"GO:1904105"}


id: MOD:00768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfone with neutral loss of CH3SO2H.","definition_xrefs":["PubMed:9004526","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 80 Da","termid":"MOD:00768"}


id: FYPO:0000103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to copper ions. Cells stop growing (and may die) at a concentration of copper ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to copper","synonyms":[{"name":"hypersensitive to copper","type":"exact"},{"name":"sensitive to copper during mitotic cell cycle","type":"related"},{"name":"sensitive to copper during vegetative growth","type":"exact"},{"name":"sensitive to copper ions","type":"exact"}],"termid":"FYPO:0000103"}


id: PBO:0053877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1153","termid":"PBO:0053877"}


id: GO:0035125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the embryonic anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anal fin morphogenesis","termid":"GO:0035125"}


id: SO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nucleomorph sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nucleomorphic_sequence","termid":"SO:0000739"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorph_gene","synonyms":[{"name":"nucleomorph gene","type":"exact"}],"termid":"SO:0000097"}


id: PBO:0043064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRFAM7A pseudogene 2","termid":"PBO:0043064"}


id: GO:1905311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:rl","GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"negatively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"down regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"down-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"downregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"inhibition of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1905311"}


id: PBO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actin_filament-based_movement","termid":"PBO:0035713"}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: PBO:0075868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 8","termid":"PBO:0075868"}


id: PATO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000109 water sensitivity (obsolete PATO:0000109)","termid":"PATO:0000109"}


id: GO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}


id: GO:0006623
data:
  {"annotated_genes":["SJAG_04552","SJAG_03970","SJAG_16459","SJAG_03385","SJAG_01281","SJAG_01981","SJAG_01088","SJAG_03976","SJAG_00380","SJAG_00204","SJAG_01488","SJAG_01360","SJAG_05210","SJAG_00208","SJAG_00108","SJAG_03250","SJAG_00181","SJAG_01229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85089,86353,88263,93540,97246,98261,100176,100196,102868],"is_not":false,"summary":null,"term":"GO:0006623"},{"annotations":[87778,109435,101874,84206,87222,84320,84284,110566,87644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole, usually using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04552":null,"SJAG_05210":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein targeting to vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein vacuolar targeting","type":"exact"},{"name":"protein-vacuolar targeting","type":"exact"},{"name":"protein-vacuole targeting","type":"exact"},{"name":"vacuolar protein sorting","type":"exact"}],"termid":"GO:0006623","terms_by_termid":{"GO:0006623":null,"GO:0120113":null}}


id: GO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.","definition_xrefs":["EC:2.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase activity","secondary_identifiers":["RHEA:36171","Reactome:R-HSA-390427","MetaCyc:ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"1-acyl-glycerone-3-phosphate:long-chain-alcohol O-3-phospho-2-oxopropanyltransferase activity","type":"related"},{"name":"DHAP-AT","type":"related"},{"name":"alkyl DHAP synthetase activity","type":"related"},{"name":"alkyl-DHAP","type":"related"},{"name":"alkyl-DHAP synthase activity","type":"related"},{"name":"alkyldihydroxyacetone phosphate synthetase activity","type":"related"},{"name":"alkyldihydroxyacetonephosphate synthase activity","type":"related"},{"name":"dihydroxyacetone-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0008609"}


id: PR:Q9USR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02581","PANTHER:PTHR24006:SF31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-splicing protein ubp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.07","secondary_identifiers":["UniProtKB:Q9USR2"],"synonyms":[{"name":"Spom972h-USP39","type":"exact"},{"name":"inactive ubiquitin-specific-processing protease 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR2"}


id: GO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type III hypersensitivity","termid":"GO:0001803"}


id: GO:0046452
data:
  {"annotated_genes":["SJAG_00529","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110178],"is_not":false,"summary":null,"term":"GO:0046452"},{"annotations":[67467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dihydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dihydrofolate metabolism","type":"exact"},{"name":"dihydrofolate reduction","type":"narrow"}],"termid":"GO:0046452","terms_by_termid":{"GO:0006761":null,"GO:0046452":null}}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: PBO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 72","termid":"PBO:0071231"}


id: PBO:0078829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 6-1","termid":"PBO:0078829"}


id: PBO:0055071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2488","termid":"PBO:0055071"}


id: PATO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ictal","termid":"PATO:0001913"}


id: PBO:0061574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 beta (pseudogene)","termid":"PBO:0061574"}


id: PBO:0058557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6499","termid":"PBO:0058557"}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: GO:0019938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; occurs in mammals in proteins as yet unidentified by a mechanism probably analogous to that of transglutaminase reactions.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic (obsolete GO:0019938)","termid":"GO:0019938"}


id: FYPO:0002966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle","synonyms":[{"name":"normal protein localisation to mitotic spindle","type":"exact"},{"name":"normal protein localization to mitotic spindle during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002966"}


id: PBO:0040860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliverdin reductase B","termid":"PBO:0040860"}


id: PBO:0069678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 955, pseudogene","termid":"PBO:0069678"}


id: SO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a methylation guide small nucleolar RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA_primary_transcript","synonyms":[{"name":"methylation guide snoRNA primary transcript","type":"exact"}],"termid":"SO:0000580"}


id: PR:P0CH06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi1 gene.","definition_xrefs":["UniProtKB:P0CH06","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.04","synonyms":[{"name":"SPAC11G7.04","type":"related"},{"name":"Spom972h-ubi1","type":"exact"}],"termid":"PR:P0CH06"}


id: GO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran + H+ = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran.","definition_xrefs":["RHEA:18061","EC:2.3.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity","secondary_identifiers":["GO:0018714","MetaCyc:2.3.1.101-RXN","UM-BBD_reactionID:r0346","KEGG_REACTION:R03390"],"synonyms":[{"name":"FTR","type":"related"},{"name":"N-formylmethanofuran(CHO-MFR):tetrahydromethanopterin(H4MPT) formyltransferase activity","type":"related"},{"name":"formylmethanofuran-tetrahydromethanopterin formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin 5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin N5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:tetrahydromethanopterin formyltransferase activity","type":"related"}],"termid":"GO:0030270"}


id: GO:0005365
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88716,94187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of myo-inositol from one side of a membrane to the other. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"myo-inositol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin Bh transporter activity","type":"exact"}],"termid":"GO:0005365","terms_by_termid":{"GO:0005366":null}}


id: PBO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial isoleucine-tRNA ligase","termid":"PBO:0090612"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: MOD:01187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an L-pyrrolysine residue, a natural pretranslational modification.","definition_xrefs":["PubMed:12029132","PubMed:16096277","ChEBI:21860","RESID:AA0321","PubMed:15314242","Unimod:435","PubMed:12029131","PubMed:11435424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine residue","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:01187"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["EC:2.4.1.219","RHEA:19385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.219-RXN","KEGG_REACTION:R05882"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: PBO:0109630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase (pseudogene)","termid":"PBO:0109630"}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: GO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont macromolecule (obsolete GO:0052416)","termid":"GO:0052416"}


id: GO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the formation of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by symbiont of substance in host (obsolete GO:0052007)","synonyms":[{"name":"biosynthesis by organism of substance in host","type":"exact"}],"termid":"GO:0052007"}


id: PBO:0074065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 40","termid":"PBO:0074065"}


id: GO:0033857
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111169],"is_not":false,"summary":null,"term":"GO:0033857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 5-diphosphate pentakisphosphate = ADP + 1D-myo-inositol bisdiphosphate tetrakisphosphate.","definition_xrefs":["EC:2.7.4.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diphosphoinositol-pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0102092","MetaCyc:2.7.4.24-RXN"],"synonyms":[{"name":"5-diphosphoinositol pentakisphosphate 3-kinase activity","type":"exact"},{"name":"PP-IP5 kinase activity","type":"related"},{"name":"PP-InsP5 kinase activity","type":"related"},{"name":"PPIP5K","type":"related"}],"termid":"GO:0033857","terms_by_termid":{"GO:0033857":null}}


id: PBO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 3","termid":"PBO:0048082"}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110549],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["EC:3.1.13.1","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0004527","GO:0140098","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"},{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: FYPO:0000915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal pyruvate dehydrogenase activity","synonyms":[{"name":"abnormal PDH activity","type":"exact"}],"termid":"FYPO:0000915"}


id: GO:2000654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"}


id: GO:0035249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, glutamatergic","synonyms":[{"name":"glutamatergic synaptic transmission","type":"exact"}],"termid":"GO:0035249"}


id: PBO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity (predicted)","termid":"PBO:0000267"}


id: PBO:0067130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 177, pseudogene","termid":"PBO:0067130"}


id: GO:0034260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of GTP hydrolysis by a GTPase.","definition_xrefs":["GOC:mah","GOC:rb","GO_REF:0000058","PMID:16143306","PMID:24335649","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTPase activity","termid":"GO:0043087"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTPase activity","secondary_identifiers":["GO:0034259","GO:1902881","GO:0034261","GO:1902264"],"synonyms":[{"name":"down regulation of GTPase activity","type":"exact"},{"name":"down regulation of Rab GTPase activity","type":"narrow"},{"name":"down regulation of Ras GTPase activity","type":"narrow"},{"name":"down regulation of Rho GTPase activity","type":"narrow"},{"name":"down regulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"down-regulation of GTPase activity","type":"exact"},{"name":"down-regulation of Rab GTPase activity","type":"narrow"},{"name":"down-regulation of Ras GTPase activity","type":"narrow"},{"name":"down-regulation of Rho GTPase activity","type":"narrow"},{"name":"down-regulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"downregulation of GTPase activity","type":"exact"},{"name":"downregulation of Rab GTPase activity","type":"narrow"},{"name":"downregulation of Ras GTPase activity","type":"narrow"},{"name":"downregulation of Rho GTPase activity","type":"narrow"},{"name":"downregulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"inhibition of GTPase activity","type":"narrow"},{"name":"inhibition of Rab GTPase activity","type":"narrow"},{"name":"inhibition of Ras GTPase activity","type":"narrow"},{"name":"inhibition of Rho GTPase activity","type":"narrow"},{"name":"inhibition of regulation of Ran GTPase activity","type":"narrow"},{"name":"negative regulation of Rab GTPase activity","type":"narrow"},{"name":"negative regulation of Ran GTPase activity","type":"narrow"},{"name":"negative regulation of Ras GTPase activity","type":"narrow"},{"name":"negative regulation of Rho GTPase activity","type":"narrow"},{"name":"negative regulation of guanosinetriphosphatase activity","type":"exact"}],"termid":"GO:0034260"}


id: FYECO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PMID:12653111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited thiamine","termid":"FYECO:0000105"}


id: PBO:0016931
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane AnChored protein","termid":"PBO:0016931"}


id: PR:Q10659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane glycoprotein spo14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.01","synonyms":[{"name":"SEC12-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo14","type":"exact"},{"name":"sporulation-specific protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10659"}


id: MOD:02008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoleylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoleylated residue","termid":"MOD:02008"}


id: PBO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Initiation Defective","termid":"PBO:0000220"}


id: PBO:0059006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC pseudogene 2","termid":"PBO:0059006"}


id: PBO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec1","termid":"PBO:0002617"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: PBO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 6","termid":"PBO:0060484"}


id: GO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first few specialized divisions of an activated animal egg.","definition_xrefs":["ISBN:0070524300","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cleavage","termid":"GO:0040016"}


id: PR:O13894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 103 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.02c","synonyms":[{"name":"Spom972h-mug103","type":"exact"}],"termid":"PR:O13894"}


id: PR:O14003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.10c","secondary_identifiers":["UniProtKB:O14003"],"synonyms":[{"name":"Spom972h-RFC5","type":"exact"},{"name":"replication factor C3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14003"}


id: GO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}


id: PATO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rough","termid":"PATO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warty","termid":"PATO:0001361"}


id: PBO:0045836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 26","termid":"PBO:0045836"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["PMID:28966424","GOC:bhm","PMID:21734642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 1","termid":"PBO:0044306"}


id: PBO:0026722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_oligomerization","termid":"PBO:0026722"}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: PR:O36029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4F10.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.17","synonyms":[{"name":"Spom972h-SPAC4F10.17","type":"exact"}],"termid":"PR:O36029"}


id: PBO:0043313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 2","termid":"PBO:0043313"}


id: MOD:00330
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to a (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["PubMed:10869342","PubMed:10529169","PubMed:7559521","RESID:AA0325","Unimod:413#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(phospho-5'-guanosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(1-(5'-adenosine phosphono)imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-guanosine)-L-histidine","type":"exact"},{"name":"ACT_SITE GMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-guanosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(tau)-5'-guanylic-L-histidine","type":"exact"},{"name":"N1'-guanylylated histidine","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"},{"name":"tele-5'-guanylic-L-histidine","type":"exact"}],"termid":"MOD:00330"}


id: PBO:0082267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation; activity regulated by TORC1 effectors, Npr1p and Par32p; human homolog RHCG complements yeast null mutant; mutations in human homolog RHCG implicated in metabolic acidosis; MEP1 has a paralog, MEP3, that arose from the whole genome duplication","termid":"PBO:0082267"}


id: PBO:0084511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family; this family has seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane; regulated by sterol binding","termid":"PBO:0084511"}


id: GO:1905888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GO_REF:0000058","GOC:aruk","GOC:bc","GOC:TermGenie","PMID:7592957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:1905890"},{"relation_name":"negatively_regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"down regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"down-regulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"downregulation of cellular response to VLDL particle stimulus","type":"exact"},{"name":"downregulation of cellular response to very-low-density lipoprotein particle stimulus","type":"exact"},{"name":"inhibition of cellular response to VLDL particle stimulus","type":"narrow"},{"name":"inhibition of cellular response to very-low-density lipoprotein particle stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905888"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: PR:Q9UTT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.02c","synonyms":[{"name":"Spom972h-ubp15","type":"exact"},{"name":"deubiquitinating enzyme 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT1"}


id: PBO:0054070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1418","termid":"PBO:0054070"}


id: PBO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 34","termid":"PBO:0071428"}


id: GO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biomineral tissue development","termid":"GO:0070167"}


id: PBO:0108968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 1","termid":"PBO:0108968"}


id: PBO:0055762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA sorafenib resistance in renal cell carcinoma associated","termid":"PBO:0055762"}


id: PBO:0031525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031525"}


id: GO:0033148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"positively_regulates","term_name":"intracellular estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"positive regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"positive regulation of estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0033148"}


id: PBO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031523"}


id: GO:0045835
data:
  {"annotated_genes":["SJAG_03327","SJAG_01680","SJAG_00364","SJAG_04287","SJAG_01082","SJAG_00266","SJAG_03529","SJAG_01330","SJAG_03438","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102437,110614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[85238,112176,76940,110378,102742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[104103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109916],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97457],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear division","termid":"GO:0051784"},{"relation_name":"negatively_regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"negative regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiosis","type":"exact"},{"name":"down-regulation of meiosis","type":"exact"},{"name":"downregulation of meiosis","type":"exact"},{"name":"inhibition of meiosis","type":"narrow"},{"name":"negative regulation of meiosis","type":"exact"}],"termid":"GO:0045835","terms_by_termid":{"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: PBO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apomorphy_relationship_with","termid":"PBO:0034078"}


id: FYPO:0000466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased invasive growth (obsolete FYPO:0000466)","synonyms":[{"name":"invasive growth: decreased","type":"related"},{"name":"reduced invasive growth","type":"exact"}],"termid":"FYPO:0000466"}


id: PBO:0013829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein Ppp1 (predicted)","termid":"PBO:0013829"}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: PBO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YOR212W is not functional ortholog","termid":"PBO:0003635"}


id: PBO:0073380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 and spectrin domain containing 1","termid":"PBO:0073380"}


id: PBO:0039141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AJUBA divergent transcript","termid":"PBO:0039141"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: GO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","synonyms":[{"name":"circulatory renin-angiotensin blood pressure regulation","type":"exact"},{"name":"circulatory renin-angiotensin control of blood pressure","type":"related"},{"name":"circulatory renin-angiotensin regulation of blood pressure","type":"exact"},{"name":"control of blood pressure by circulatory renin-angiotensin","type":"related"},{"name":"renin-angiotensin blood pressure control","type":"related"}],"termid":"GO:0001991"}


id: PBO:0071351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 9","termid":"PBO:0071351"}


id: GO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:BHF","GOC:mtg_transport","GOC:pr","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sodium channel activity","secondary_identifiers":["Reactome:R-HSA-9717382","Reactome:R-HSA-9717374","Reactome:R-HSA-9717396","Reactome:R-HSA-3295580","Reactome:R-HSA-2730664","Reactome:R-HSA-9717395"],"termid":"GO:0005272"}


id: PBO:0036537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic R3H and G-patch domain protein Sqs2","termid":"PBO:0036537"}


id: GO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited.","definition_xrefs":["GOC:dph","PMID:11912487","PMID:15057936","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hh target transcription factor activity (obsolete GO:0007228)","synonyms":[{"name":"activation of hh target transcription factor","type":"exact"},{"name":"positive regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:0007228"}


id: GO:2000026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multicellular organismal development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multicellular organismal development","termid":"GO:2000026"}


id: PBO:0074196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 6","termid":"PBO:0074196"}


id: GO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [myelin proteolipid] + palmityl-CoA = [myelin proteolipid] O-palmitoylprotein + CoA.","definition_xrefs":["PMID:3818589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"myelin-proteolipid O-palmitoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.100-RXN","EC:2.3.1.100"],"synonyms":[{"name":"[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"},{"name":"acyl-protein synthase activity","type":"broad"},{"name":"myelin PLP acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047157"}


id: PBO:0077117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 29","termid":"PBO:0077117"}


id: PBO:0063468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDHA1 pseudogene 1","termid":"PBO:0063468"}


id: GO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"positively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gluconeogenesis","synonyms":[{"name":"activation of gluconeogenesis","type":"narrow"},{"name":"stimulation of gluconeogenesis","type":"narrow"},{"name":"up regulation of gluconeogenesis","type":"exact"},{"name":"up-regulation of gluconeogenesis","type":"exact"},{"name":"upregulation of gluconeogenesis","type":"exact"}],"termid":"GO:0045722"}


id: PBO:0030349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030349"}


id: GO:0010335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to non-ionic osmotic stress","termid":"GO:0010335"}


id: GO:0033032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid cell apoptotic process","synonyms":[{"name":"regulation of myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033032"}


id: PBO:0087922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that is activated by a MAPK signaling cascade; activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth","termid":"PBO:0087922"}


id: PBO:0062667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily I member 1 pseudogene","termid":"PBO:0062667"}


id: PBO:0091078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase","termid":"PBO:0091078"}


id: GO:0033530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"raffinose metabolic process","synonyms":[{"name":"raffinose metabolism","type":"exact"}],"termid":"GO:0033530"}


id: PBO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine","termid":"PBO:0001020"}


id: PBO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kar3 subfamily","termid":"PBO:0001145"}


id: GO:0007533
data:
  {"annotated_genes":["SJAG_01410","SJAG_01419","SJAG_00247","SJAG_01495","SJAG_01601","SJAG_01677","SJAG_01076","SJAG_05239","SJAG_03997","SJAG_03097","SJAG_03221","SJAG_02226","SJAG_01465","SJAG_00073","SJAG_02828","SJAG_02079","SJAG_02556","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92311,92792,95189,95253,106434,106954,114830],"is_not":false,"summary":null,"term":"GO:0007533"},{"annotations":[104644,106433,95251,102759,106953,102189,96701,111134,112912,114829,92310,84129,85343,93567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[104645,99358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type switching","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating type switching and recombination","type":"related"}],"termid":"GO:0007533","terms_by_termid":{"GO:0007533":null,"GO:0007534":null,"GO:0071171":null,"GO:0071515":null}}


id: PBO:0027519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiotic_interphase","termid":"PBO:0027519"}


id: PBO:0050070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HM13 antisense RNA 1","termid":"PBO:0050070"}


id: PBO:0017492
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_inferred","termid":"PBO:0017492"}


id: PBO:0003126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.-","termid":"PBO:0003126"}


id: GO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of floral organ primordia around a central axis in a flower primordium.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower phyllotactic patterning","termid":"GO:0060773"}


id: GO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticonvulsant stimulus, a drug used to prevent seizures or reduce their severity.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticonvulsant","termid":"GO:0036277"}


id: PBO:0057693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-1","termid":"PBO:0057693"}


id: GO:0045014
data:
  {"annotated_genes":["SJAG_03473","SJAG_03911"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71001,102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["PMID:11018147","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"},{"relation_name":"is_a","term_name":"negative regulation of transcription by glucose","termid":"GO:0061986"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by glucose","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transcription by glucose","type":"exact"},{"name":"down-regulation of transcription by glucose","type":"exact"},{"name":"downregulation of transcription by glucose","type":"exact"},{"name":"glucose effect","type":"exact"},{"name":"glucose repression","type":"exact"},{"name":"inhibition of transcription by glucose","type":"narrow"}],"termid":"GO:0045014","terms_by_termid":{"GO:0000433":null}}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: PBO:0046613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER34 member 1, envelope","termid":"PBO:0046613"}


id: FYPO:0000712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"delayed onset of mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0000712"}


id: PBO:0076365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 2","termid":"PBO:0076365"}


id: PBO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 16","termid":"PBO:0071599"}


id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0028356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphatase_activity","termid":"PBO:0028356"}


id: PBO:0070521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 20","termid":"PBO:0070521"}


id: PBO:0057661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1253","termid":"PBO:0057661"}


id: PBO:0044648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCMP deaminase","termid":"PBO:0044648"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: GO:0097117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which guanylate kinase-associated proteins (GKAPs) are localized to distinct domains in the cell membrane. GKAP facilitates assembly of the post synaptic density of neurons.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:15620359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"guanylate kinase-associated protein clustering","synonyms":[{"name":"GKAP clustering","type":"exact"}],"termid":"GO:0097117"}


id: GO:2000804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000804"}


id: GO:0141117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents the activation of host complement by binding a soluble complement control protein (CCP) of the host and recuiting it to the microbe surface. The normal role of CCPs is to prevent complement activation on 'self' cellular targets. When soluble CCPs are recuited to the surface of a microbe, the complement fails to activate.","definition_xrefs":["PMID:24129254","PMID:17513779","PMID:22540535","PMID:27304426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by recruitment of complement control protein","synonyms":[{"name":"suppression of complement activation by another organism by recruitment of complement control protein","type":"broad"},{"name":"suppression of complement activation by another organism by recuitement of complement control protein","type":"exact"}],"termid":"GO:0141117"}


id: PBO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O4","termid":"PBO:0047824"}


id: PBO:0084725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; required for proteolytic processing of Cox2p and its assembly into cytochrome c oxidase","termid":"PBO:0084725"}


id: PBO:0077391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 131","termid":"PBO:0077391"}


id: PBO:0086738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partial duplicate of RSC30/YHR056C, truncated remnant of segmental duplication","termid":"PBO:0086738"}


id: GO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["PMID:11741859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiation of acetate catabolic process","termid":"GO:0043077"},{"relation_name":"part_of","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"initiation of acetate catabolic process by acetate","synonyms":[{"name":"initiation of acetate breakdown by acetate","type":"exact"},{"name":"initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045146"}


id: PBO:0030386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cortex_morphology","termid":"PBO:0030386"}


id: PBO:0072960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 2","termid":"PBO:0072960"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13295:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: GO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.","definition_xrefs":["EC:5.3.1.17","RHEA:23896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity","secondary_identifiers":["MetaCyc:5.3.1.17-RXN","KEGG_REACTION:R04383"],"synonyms":[{"name":"4-deoxy-L-threo-5-hexosulose-uronate aldose-ketose-isomerase activity","type":"related"},{"name":"4-deoxy-L-threo-5-hexulose uronate isomerase activity","type":"related"},{"name":"5-keto-4-deoxyuronate isomerase activity","type":"related"}],"termid":"GO:0008697"}


id: GO:0004074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin + NAD(P)+ = biliverdin + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"biliverdin reductase (NAD(P)H) activity","secondary_identifiers":["Reactome:R-HSA-189384","MetaCyc:BILIVERDIN-REDUCTASE-RXN"],"synonyms":[{"name":"bilirubin:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0004074"}


id: PBO:0091716
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep PhosphoRelay","termid":"PBO:0091716"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: PR:O14259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfp47 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp4-interactor sfp47 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.02c","synonyms":[{"name":"Spom972h-sfp47","type":"exact"}],"termid":"PR:O14259"}


id: PBO:0014266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex subunit Rpn15/Dss11","termid":"PBO:0014266"}


id: PBO:0043422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornifelin","termid":"PBO:0043422"}


id: GO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075089)","synonyms":[{"name":"negative regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075089"}


id: PBO:0077492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM212 antisense RNA 1","termid":"PBO:0077492"}


id: GO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vulval development","termid":"GO:0040028"}


id: FYPO:0005610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a smaller portion of the chromosome than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of protein localization to double-strand break site","synonyms":[{"name":"decreased spatial extent of protein localisation to double-strand break site","type":"exact"},{"name":"decreased spatial extent of protein localization to DSB","type":"exact"},{"name":"decreased spatial extent of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of protein localization to site of double-strand break","type":"exact"},{"name":"reduced spatial extent of protein localization to double-strand break","type":"exact"}],"termid":"FYPO:0005610"}


id: PBO:0011129
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase Like Fidgetin","termid":"PBO:0011129"}


id: FYPO:0000655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding phenotype","termid":"FYPO:0000653"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"normal DNA binding","termid":"FYPO:0000655"}


id: PBO:0067926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 228","termid":"PBO:0067926"}


id: PBO:0027805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM216","termid":"PBO:0027805"}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: RO:HOM0000010
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected by similarity in content and organization between chromosomes.","definition_xrefs":["MeSH:Synteny"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_homology_relationship_with","synonyms":[{"name":"syntenic homologous to","type":"exact"},{"name":"synteny","type":"related"}],"termid":"RO:HOM0000010"}


id: GO:0034268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"discadenine biosynthetic process","synonyms":[{"name":"discadenine anabolism","type":"exact"},{"name":"discadenine biosynthesis","type":"exact"},{"name":"discadenine formation","type":"exact"},{"name":"discadenine synthesis","type":"exact"}],"termid":"GO:0034268"}


id: SO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post-translationally modified region in which residues of the protein are modified by phosphorylation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post_translationally_modified_region","termid":"SO:0001089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"phosphorylation_site","synonyms":[{"name":"phosphorylation site","type":"exact"}],"termid":"SO:0001811"}


id: GO:2000850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of corticosteroid hormone secretion","termid":"GO:2000847"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"}


id: PBO:0069223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 478, pseudogene","termid":"PBO:0069223"}


id: PBO:0087586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087586"}


id: PR:Q9P7C6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.02","secondary_identifiers":["UniProtKB:Q9P7C6"],"synonyms":[{"name":"Spom972h-DNAJC17","type":"exact"},{"name":"complexed with cdc5 protein 23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C6"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_02370","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88693,101701],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225542","PMID:15225544","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: GO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corrin metabolic process","termid":"GO:0015009"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"corrin biosynthetic process","synonyms":[{"name":"corrin anabolism","type":"exact"},{"name":"corrin biosynthesis","type":"exact"},{"name":"corrin formation","type":"exact"},{"name":"corrin synthesis","type":"exact"}],"termid":"GO:0046140"}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: MOD:00191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to (Z)-2,3-didehydrotyrosine.","definition_xrefs":["PubMed:1347277","PubMed:9631087","RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated tyrosine","termid":"MOD:00706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-2,3-didehydrotyrosine","synonyms":[{"name":"(2Z)-2-amino-3-(4-hydroxyphenyl)prop-2-enoic acid","type":"exact"},{"name":"(Z)-2,3-didehydrogenated tyrosine","type":"exact"},{"name":"(Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"},{"name":"MOD_RES (Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"Z-dHTyr","type":"exact"},{"name":"amino-(para-hydroxybenzylidenyl)acetic acid","type":"exact"},{"name":"cis-dehydrotyrosine","type":"exact"},{"name":"green fluorescent protein chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein chromophore","type":"exact"}],"termid":"MOD:00191"}


id: PBO:0078628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77B, pseudogene","termid":"PBO:0078628"}


id: PBO:0081609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 532","termid":"PBO:0081609"}


id: GO:0004842
data:
  {"annotated_genes":["SJAG_03615","SJAG_04573","SJAG_03860","SJAG_04309","SJAG_01992","SJAG_02685","SJAG_01360","SJAG_02918","SJAG_05274","SJAG_02371","SJAG_01535","SJAG_02319","SJAG_04151","SJAG_02347","SJAG_01212","SJAG_01253","SJAG_00209","SJAG_03970","SJAG_01900","SJAG_02668","SJAG_02575","SJAG_04857","SJAG_02308","SJAG_03968","SJAG_04915","SJAG_04990","SJAG_03112","SJAG_00293","SJAG_00855","SJAG_01854","SJAG_00173","SJAG_02851","SJAG_03387","SJAG_02299","SJAG_04966","SJAG_03324","SJAG_00475","SJAG_05340","SJAG_00300","SJAG_01772","SJAG_04783","SJAG_05236","SJAG_01165","SJAG_04600","SJAG_00509","SJAG_03191","SJAG_05022","SJAG_00561","SJAG_00931","SJAG_04612","SJAG_00111","SJAG_00341","SJAG_00188","SJAG_03613","SJAG_04429","SJAG_03831","SJAG_03006","SJAG_05264","SJAG_04619","SJAG_00208","SJAG_05323","SJAG_00435","SJAG_00552","SJAG_00500","SJAG_03618","SJAG_02746","SJAG_01637","SJAG_01507","SJAG_03175","SJAG_02521","SJAG_03657","SJAG_01533","SJAG_03005","SJAG_00819","SJAG_01679","SJAG_01593","SJAG_02169","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93527],"is_not":false,"summary":null,"term":"GO:0004842"},{"annotations":[114910,112329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[90488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[104309,110392,98105,84210,84366,98242,112897,98393,83999,109115,87392,102576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[105783,85082,92657,85894,96379,85516,86379,113335,109795,91954,100485,114508,97309,91536,84829,90489,85963,101108,86894,110128,95521,84509,102999,94677,99557,104138,100416,97430,101418,87224,112818,78812,108944,105013,86066,84221,106367,111520,84425,112817,103081,87823,109703,99541,104002,84211,108215,106102,84290,113295,102018,85718,92741,101079,97997,109526,89710,88911,99158,110445,101360,92844,92925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[88841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.","definition_xrefs":["GOC:jh2","GOC:BioGRID","PMID:9635407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase 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transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-168915","Reactome:R-HSA-5483238","Reactome:R-HSA-9793485","Reactome:R-HSA-9796387","Reactome:R-HSA-2769007","Reactome:R-HSA-1980118","Reactome:R-HSA-9014342","Reactome:R-HSA-9796626","Reactome:R-HSA-1253282","Reactome:R-HSA-202453","Reactome:R-HSA-2186747","Reactome:R-HSA-5684250","Reactome:R-HSA-5205682","Reactome:R-HSA-5610742","Reactome:R-HSA-2900765","Reactome:R-HSA-5607756","Reactome:R-HSA-1234172","Reactome:R-HSA-9758604","Reactome:R-HSA-1169397","Reactome:R-HSA-1169402","Reactome:R-HSA-5693108","Reactome:R-HSA-1234163","Reactome:R-HSA-173542","Reactome:R-HSA-174195","Reactome:R-HSA-1980074","Reactome:R-HSA-183051","Reactome:R-HSA-936942","Reactome:R-HSA-5610746","Reactome:R-HSA-1912386","Reactome:R-HSA-2682349","Reactome:R-HSA-9750946","Reactome:R-HSA-209063","Reactome:R-HSA-1169405","Reactome:R-HSA-1169395","Reactome:R-HSA-9793679","Reactome:R-HSA-1169406","Reactome:R-HSA-400267","Reactome:R-HSA-1918092","Reactome:R-HSA-5607728","Reactome:R-HSA-9817362","Reactome:R-HSA-205118","Reactome:R-HSA-5667111","Reactome:R-HSA-983153","Reactome:R-HSA-1358789","Reactome:R-HSA-180540","Reactome:R-HSA-173545","Reactome:R-HSA-5675470","Reactome:R-HSA-9013069","Reactome:R-HSA-1358790","Reactome:R-HSA-5362412","Reactome:R-HSA-5668454","Reactome:R-HSA-870449","Reactome:R-HSA-69598","KEGG_REACTION:R03876","Reactome:R-HSA-5667107","Reactome:R-HSA-9833973","Reactome:R-HSA-5357757","Reactome:R-HSA-211734","Reactome:R-HSA-918224","Reactome:R-HSA-264444","GO:0004840","Reactome:R-HSA-2186785","Reactome:R-HSA-9793444","Reactome:R-HSA-3249386","Reactome:R-HSA-8948709","Reactome:R-HSA-5691108","Reactome:R-HSA-174104","Reactome:R-HSA-182986","Reactome:R-HSA-5607725","Reactome:R-HSA-75824","Reactome:R-HSA-3134804","Reactome:R-HSA-450358","Reactome:R-HSA-936986","Reactome:R-HSA-9645394","Reactome:R-HSA-9833155","Reactome:R-HSA-1358792","Reactome:R-HSA-3000335","Reactome:R-HSA-3780995","Reactome:R-HSA-1169394","Reactome:R-HSA-9645414","Reactome:R-HSA-1852623","Reactome:R-HSA-187575","Reactome:R-HSA-2213017","Reactome:R-HSA-2187368","Reactome:R-HSA-68712","Reactome:R-HSA-5660753","Reactome:R-HSA-1169398","Reactome:R-HSA-2172172","Reactome:R-HSA-451418","Reactome:R-HSA-9688831","Reactome:R-HSA-4332236","Reactome:R-HSA-2179276","Reactome:R-HSA-983156","Reactome:R-HSA-2730904","Reactome:R-HSA-174057","Reactome:R-HSA-179417","Reactome:R-HSA-9628444","Reactome:R-HSA-5610745","Reactome:R-HSA-1977296","Reactome:R-HSA-180597","GO:0004841","Reactome:R-HSA-446877","Reactome:R-HSA-2737728","Reactome:R-HSA-201425","Reactome:R-HSA-936412","Reactome:R-HSA-3134946","Reactome:R-HSA-741386","Reactome:R-HSA-8956106","Reactome:R-HSA-1363331","Reactome:R-HSA-3788724","Reactome:R-HSA-9815507","Reactome:R-HSA-983140","Reactome:R-HSA-3781009","Reactome:R-HSA-9013974","Reactome:R-HSA-5668534","Reactome:R-HSA-174159","Reactome:R-HSA-174144","Reactome:R-HSA-174227","Reactome:R-HSA-183089","Reactome:R-HSA-3797226","Reactome:R-HSA-9701000","Reactome:R-HSA-202534","Reactome:R-HSA-9796346","Reactome:R-HSA-182993","Reactome:R-HSA-975118","Reactome:R-HSA-1912357","Reactome:R-HSA-2169050","Reactome:R-HSA-5607757","Reactome:R-HSA-1918095","Reactome:R-HSA-975147","Reactome:R-HSA-183084","Reactome:R-HSA-5652009","Reactome:R-HSA-5655170"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"broad"},{"name":"ubiquitin conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin ligase activity","type":"narrow"},{"name":"ubiquitin protein ligase activity","type":"narrow"},{"name":"ubiquitin protein-ligase activity","type":"narrow"},{"name":"ubiquitin-conjugating enzyme activity","type":"narrow"}],"termid":"GO:0004842","terms_by_termid":{"GO:0004842":null,"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0084522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BCH2 has a paralog, CHS6, that arose from the whole genome duplication","termid":"PBO:0084522"}


id: PBO:0091995
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tfb6 annotation seems tenuous, SGD have not annotated","termid":"PBO:0091995"}


id: GO:1903563
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97556],"is_not":false,"summary":null,"term":"GO:1903563"}]},"cv_name":"biological_process","definition":"Any microtubule bundle formation that is involved in horsetail-astral microtubule organization.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15647375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"horsetail-astral microtubule organization","termid":"GO:0032118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0140013","GO:0006810","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"microtubule bundle formation involved in horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundle formation involved in horsetail-astral microtubule array organization","type":"exact"},{"name":"microtubule bundle formation involved in horsetail-astral microtubule organisation","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule array organization","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule organisation","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule organization","type":"exact"}],"termid":"GO:1903563","terms_by_termid":{"GO:1903563":null}}


id: GO:0061187
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10388812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"regulation of rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at rDNA","type":"broad"},{"name":"regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:0061187","terms_by_termid":{"GO:0061188":null}}


id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: GO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell antigen processing and presentation","termid":"GO:0002605"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of myeloid dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002608"}


id: PBO:0029686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oxidation","termid":"PBO:0029686"}


id: GO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in leptotene or zygotene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"early recombination nodule","termid":"GO:0005714"}


id: MOD:00995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (81)Br-L-2'-bromophenylalanine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2'-bromophenylalanine","termid":"MOD:00183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(81)Br labeled 2'-bromophenylalanine","termid":"MOD:00995"}


id: PR:Q09744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C12C2.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.03c","synonyms":[{"name":"Spom972h-SPBC12C2.03c","type":"exact"}],"termid":"PR:Q09744"}


id: PBO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 17","termid":"PBO:0050315"}


id: PATO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant inhering in a bearer by virtue of the bearer's being intricate and compounded.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexity","termid":"PATO:0001502"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["UniProtKB:Q9USH7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: PBO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 6","termid":"PBO:0061285"}


id: GO:0072529
data:
  {"annotated_genes":["SJAG_04487","SJAG_00957","SJAG_03676","SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104507,85374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[86821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[110087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyrimidine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine and derivative catabolic process","type":"exact"},{"name":"pyrimidine-containing compound breakdown","type":"exact"},{"name":"pyrimidine-containing compound catabolism","type":"exact"},{"name":"pyrimidine-containing compound degradation","type":"exact"}],"termid":"GO:0072529","terms_by_termid":{"GO:0006256":null,"GO:0009972":null,"GO:0046081":null,"GO:0046135":null}}


id: PBO:0058947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mix paired-like homeobox","termid":"PBO:0058947"}


id: GO:1903348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GO_REF:0000058","PMID:25050009","GOC:jz","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"positively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bicellular tight junction assembly","synonyms":[{"name":"activation of tight junction assembly","type":"narrow"},{"name":"activation of tight junction formation","type":"narrow"},{"name":"positive regulation of tight junction formation","type":"exact"},{"name":"up regulation of tight junction assembly","type":"exact"},{"name":"up regulation of tight junction formation","type":"exact"},{"name":"up-regulation of tight junction assembly","type":"exact"},{"name":"up-regulation of tight junction formation","type":"exact"},{"name":"upregulation of tight junction assembly","type":"exact"},{"name":"upregulation of tight junction formation","type":"exact"}],"termid":"GO:1903348"}


id: PBO:0082043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; respiratory defect of the null mutant is partially complemented by human COQ5","termid":"PBO:0082043"}


id: GO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thromboxane B2 + NAD+ = 11-dehydro-thromboxane B2 + NADH + H+.","definition_xrefs":["GOC:mw","PMID:8200461","PMID:3823488","KEGG_REACTION:R05060","PMID:3461463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-hydroxythromboxane B2 dehydrogenase activity","secondary_identifiers":["RHEA:52312","Reactome:R-HSA-2161732"],"synonyms":[{"name":"NAD dependent 11-hydroxythromboxane B2 dehydrogenase activity","type":"exact"}],"termid":"GO:0036133"}


id: PBO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 128","termid":"PBO:0042784"}


id: PBO:0058570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-2","termid":"PBO:0058570"}


id: FYPO:0007639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured at ribosomal DNA in a cell is greater than normal during G0 phase. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at rDNA during G0","synonyms":[{"name":"increased DNA damage at rDNA during cell quiescence","type":"exact"},{"name":"increased DNA damage at rDNA during quiescence","type":"exact"},{"name":"increased DNA damage at ribosomal DNA","type":"exact"}],"termid":"FYPO:0007639"}


id: GO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonuclease activity","termid":"GO:0060700"}


id: GO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"positively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development","termid":"GO:0061063"}


id: PBO:0061976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AP member 1","termid":"PBO:0061976"}


id: PBO:0052890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-1","termid":"PBO:0052890"}


id: PBO:0089682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box protein Hap2","termid":"PBO:0089682"}


id: PBO:0049283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 2","termid":"PBO:0049283"}


id: GO:0006253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCTP, deoxycytidine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCTP metabolic process","termid":"GO:0046065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCTP catabolic process","synonyms":[{"name":"dCTP breakdown","type":"exact"},{"name":"dCTP catabolism","type":"exact"},{"name":"dCTP degradation","type":"exact"}],"termid":"GO:0006253"}


id: GO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to epidermal growth factor receptor.","definition_xrefs":["PMID:15834425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-EGFR complex","synonyms":[{"name":"ITGAV-ITGB3-EGFR complex","type":"narrow"}],"termid":"GO:0071125"}


id: GO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the isomerization of poly-cis-carotenoids to all-trans-carotenoids.","definition_xrefs":["PMID:11884677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"carotenoid isomerase activity","termid":"GO:0046608"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["PMID:23093773","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: PBO:0003608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (predicted)","termid":"PBO:0003608"}


id: GO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of p-aminobenzoyl-glutamate, the anion of p-aminobenzoyl-glutamic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"p-aminobenzoyl-glutamate transport","termid":"GO:0015814"}


id: PBO:0066159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 2","termid":"PBO:0066159"}


id: FYPO:0007821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles","synonyms":[{"name":"enlarged vacuoles","type":"exact"}],"termid":"FYPO:0007821"}


id: PBO:0027293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell_with_fragmented_septum","termid":"PBO:0027293"}


id: PR:Q9HDV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug180 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steryl acetyl hydrolase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.02","synonyms":[{"name":"Spom972h-mug180","type":"exact"},{"name":"meiotically up-regulated gene 180 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV1"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: PBO:0056218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C1","termid":"PBO:0056218"}


id: GO:0097177
data:
  {"annotated_genes":["SJAG_02856","SJAG_04351","SJAG_04635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88133,98757,101714],"is_not":false,"summary":null,"term":"GO:0097177"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrial ribosome.","definition_xrefs":["PMID:20739282","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02856":null,"SJAG_04351":null,"SJAG_04635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ribosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097177","terms_by_termid":{"GO:0097177":null}}


id: PBO:0075828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 3","termid":"PBO:0075828"}


id: PBO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc5","termid":"PBO:0002038"}


id: PBO:0083213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-1/YDR545W","termid":"PBO:0083213"}


id: PBO:0066804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 103","termid":"PBO:0066804"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_03660","SJAG_03174","SJAG_04276","SJAG_00839","SJAG_02010","SJAG_03903","SJAG_02135","SJAG_04334","SJAG_03958","SJAG_02369","SJAG_06622","SJAG_02796","SJAG_01209","SJAG_00461","SJAG_00027","SJAG_00605","SJAG_03828","SJAG_03373","SJAG_02945","SJAG_06621","SJAG_01310","SJAG_04192","SJAG_04495","SJAG_02009","SJAG_02107","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91893,91155,97302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[105062,100586,105526,105529,101576,105059,105532,101942,105060,112467,101941,91150,94405,105064,105065,90660,99774,101575,99515,105527,105528,105061,105530,105531,105063,101577,94134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[91894,97303,91157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[105031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"},{"annotations":[115088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01209":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019388":null,"GO:0019568":null,"GO:0042843":null,"GO:0061621":null}}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: PR:Q9UUC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctu2 gene.","definition_xrefs":["UniProtKB:Q9UUC7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.13c","synonyms":[{"name":"Spom972h-ctu2","type":"exact"}],"termid":"PR:Q9UUC7"}


id: GO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.","definition_xrefs":["PMID:14622258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cholecystokinin","termid":"GO:0061847"}


id: GO:1901500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a p-xylene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to xylene","termid":"GO:1901501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to p-xylene","termid":"GO:1901500"}


id: GO:0034775
data:
  {"annotated_genes":["SJAG_01344","SJAG_01660","SJAG_03497","SJAG_05213","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91667],"is_not":false,"summary":null,"term":"GO:0034775"},{"annotations":[91666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[92210,93194,114269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"A process in which glutathione is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transport","termid":"GO:0034635"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione membrane transport","type":"exact"},{"name":"transmembrane glutathione transport","type":"exact"}],"termid":"GO:0034775","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: GO:0120190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:22767443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"negatively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bile acid secretion","termid":"GO:0120190"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: GO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 4.5S ribosomal RNA (rRNA) molecule into a mature 4.5S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"maturation of 4.5S rRNA","termid":"GO:0000476"}


id: FYPO:0004273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus is decreased.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased ascospore release from ascus","synonyms":[{"name":"reduced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004273"}


id: PBO:0087041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087041"}


id: GO:1904440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:kom","PMID:18353247","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transmembrane transport","termid":"GO:0034761"},{"relation_name":"is_a","term_name":"regulation of iron ion import across plasma membrane","termid":"GO:1904438"},{"relation_name":"positively_regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0098771"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903991"],"synonyms":[{"name":"activation of ferrous ion import into cell","type":"narrow"},{"name":"activation of ferrous iron import across plasma membrane","type":"narrow"},{"name":"positive regulation of ferrous ion import into cell","type":"related"},{"name":"positive regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"positive regulation of ferrous iron import into cell","type":"related"},{"name":"up regulation of ferrous ion import into cell","type":"related"},{"name":"up regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"up-regulation of ferrous ion import into cell","type":"related"},{"name":"up-regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"upregulation of ferrous ion import into cell","type":"related"},{"name":"upregulation of ferrous iron import across plasma membrane","type":"related"}],"termid":"GO:1904440"}


id: GO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs: the thymus and bone marrow.","definition_xrefs":["GOC:jal","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction","termid":"GO:0002508"}


id: GO:0106283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + ursodeoxycholate = 7-oxolithocholate + H+ + NADH.","definition_xrefs":["PMID:12917011","RHEA:42028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106283"}


id: GO:1905417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GO_REF:0000058","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amoeboid sperm motility","synonyms":[{"name":"down regulation of ameboid sperm motility","type":"exact"},{"name":"down regulation of ameboid sperm movement","type":"exact"},{"name":"down regulation of amoeboid sperm motility","type":"exact"},{"name":"down regulation of amoeboid sperm movement","type":"exact"},{"name":"down-regulation of ameboid sperm motility","type":"exact"},{"name":"down-regulation of ameboid sperm movement","type":"exact"},{"name":"down-regulation of amoeboid sperm motility","type":"exact"},{"name":"down-regulation of amoeboid sperm movement","type":"exact"},{"name":"downregulation of ameboid sperm motility","type":"exact"},{"name":"downregulation of ameboid sperm movement","type":"exact"},{"name":"downregulation of amoeboid sperm motility","type":"exact"},{"name":"downregulation of amoeboid sperm movement","type":"exact"},{"name":"inhibition of ameboid sperm motility","type":"narrow"},{"name":"inhibition of ameboid sperm movement","type":"narrow"},{"name":"inhibition of amoeboid sperm motility","type":"narrow"},{"name":"inhibition of amoeboid sperm movement","type":"narrow"},{"name":"negative regulation of ameboid sperm motility","type":"exact"},{"name":"negative regulation of ameboid sperm movement","type":"exact"},{"name":"negative regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905417"}


id: PBO:0074009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6","termid":"PBO:0074009"}


id: FYPO:0006260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions does not occur. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PomBase:mah","PMID:26804021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished subtelomeric chromatin knob formation","synonyms":[{"name":"abolished subtelomeric chromatin condensation","type":"broad"},{"name":"abolished subtelomeric chromatin knob assembly","type":"exact"},{"name":"knob-containing nuclei absent","type":"related"},{"name":"subtelomeric chromatin knob formation abolished","type":"exact"}],"termid":"FYPO:0006260"}


id: PBO:0068566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 17, pseudogene","termid":"PBO:0068566"}


id: PBO:0030215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_oxidative_stress","termid":"PBO:0030215"}


id: PBO:0085211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding phosphatidylserine transferase; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication","termid":"PBO:0085211"}


id: PBO:0056016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 homolog","termid":"PBO:0056016"}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: FYPO:0006195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in fewer bundles than normal (usually only one or two), and bundles are longer than normal and curved around one or both ends of the cell.","definition_xrefs":["PMID:16481403","PomBase:vw","PMID:14742702","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long interphase microtubules curved around cell end","termid":"FYPO:0005880"},{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"decreased number of elongated microtubule bundles curved around cell end","synonyms":[{"name":"decreased number of elongated MT bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated interphase microtubule bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell end during mitotic cell cycle","type":"related"},{"name":"decreased number of elongated microtubule bundles curved around cell end during vegetative growth","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell tip","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around end of cell","type":"exact"},{"name":"decreased number of microtubule arrays curved around cell end","type":"related"},{"name":"single elongated microtubule bundle curved around cell end","type":"narrow"}],"termid":"FYPO:0006195"}


id: PBO:0071755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 2","termid":"PBO:0071755"}


id: PBO:0026938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_meiosis_I","termid":"PBO:0026938"}


id: PBO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 13","termid":"PBO:0042613"}


id: PBO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35","termid":"PBO:0004997"}


id: GO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"esculetin metabolic process","termid":"GO:0033492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5349"],"synonyms":[{"name":"esculetin anabolism","type":"exact"},{"name":"esculetin biosynthesis","type":"exact"},{"name":"esculetin formation","type":"exact"},{"name":"esculetin synthesis","type":"exact"}],"termid":"GO:0033493"}


id: GO:0140447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a cytokine, resulting in the mature (active) form of the cytokine.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"},{"relation_name":"part_of","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine precursor processing","synonyms":[{"name":"interleukin maturation","type":"narrow"},{"name":"interleukin processing","type":"narrow"}],"termid":"GO:0140447"}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: PBO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 3","termid":"PBO:0043653"}


id: PBO:0030544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level","termid":"PBO:0030544"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: GO:0030817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP biosynthetic process (obsolete GO:0030817)","synonyms":[{"name":"regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"regulation of cAMP anabolism","type":"exact"},{"name":"regulation of cAMP biosynthesis","type":"exact"},{"name":"regulation of cAMP formation","type":"exact"},{"name":"regulation of cAMP synthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030817"}


id: GO:0016002
data:
  {"annotated_genes":["SJAG_01693","SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83973,113571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + acceptor + 3 H2O = sulfite + reduced acceptor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfite reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"assimilatory sulfite reductase activity","type":"exact"},{"name":"assimilatory-type sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:(acceptor) oxidoreductase activity","type":"exact"},{"name":"hydrogen-sulfide:acceptor oxidoreductase activity","type":"exact"},{"name":"sulphite reductase activity","type":"exact"}],"termid":"GO:0016002","terms_by_termid":{"GO:0004783":null}}


id: GO:0010079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of vegetative meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of vegetative meristem identity","termid":"GO:0010079"}


id: FYPO:0003960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"increased DGAT activity","type":"exact"},{"name":"increased diacylglycerol acyltransferase activity","type":"broad"}],"termid":"FYPO:0003960"}


id: GO:0046896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal leucine of proteins to form the derivative N-methyl-L-leucine.","definition_xrefs":["RESID:AA0337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-leucine modification","termid":"GO:0018204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-leucine methylation","termid":"GO:0046896"}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: PBO:0111923
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0111923"}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: PBO:0080750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-box binding protein 1","termid":"PBO:0080750"}


id: GO:1900893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane metabolic process","synonyms":[{"name":"regulation of tridecane metabolism","type":"exact"}],"termid":"GO:1900893"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: GO:0034822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellal + NAD+ + OH- = citronellate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"citronellal dehydrogenase activity","termid":"GO:0034822"}


id: PBO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family","termid":"PBO:0001260"}


id: GO:0021981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing subpallium in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell migration","termid":"GO:0021980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium radially oriented migration","termid":"GO:0021981"}


id: PBO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone","termid":"PBO:0000255"}


id: PBO:0082646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Rpd3L histone deacetylase complex; involved in silencing at telomeres, rDNA, and silent mating-type loci; involved in telomere maintenance","termid":"PBO:0082646"}


id: PBO:0070506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 5","termid":"PBO:0070506"}


id: GO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an alkanesulfonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanesulfonates are organic esters or salts of sulfonic acid containing an aliphatic hydrocarbon radical.","definition_xrefs":["PMID:31802112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"organic acid transmembrane transport","termid":"GO:1903825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"alkanesulfonate transmembrane transport","synonyms":[{"name":"alkanesulfonate transport","type":"broad"},{"name":"alkanesulphonate transport","type":"broad"}],"termid":"GO:0042918"}


id: PBO:0089247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","termid":"PBO:0089247"}


id: PBO:0043169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage intermediate layer protein 2","termid":"PBO:0043169"}


id: PBO:0048377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 2","termid":"PBO:0048377"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: GO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 3, and a complexin (or orthologs thereof).","definition_xrefs":["PMID:8824312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2, Cplx1)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2-Cplx1 complex","type":"narrow"}],"termid":"GO:0070554"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:krc","GOC:rn","PMID:32513868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_01713","SJAG_01724","SJAG_04488","SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104351,112862,95109,103829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["GOC:vw","PMID:9266685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: PBO:0045304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin binding protein","termid":"PBO:0045304"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: PBO:0027479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_mitotic_G2/M_transition_delay_and_cell_cycle_arrest_in_M_phase","termid":"PBO:0027479"}


id: PR:Q9Y7U0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eis1 gene.","definition_xrefs":["UniProtKB:Q9Y7U0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C63.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.14","synonyms":[{"name":"Spom972h-eis1","type":"exact"}],"termid":"PR:Q9Y7U0"}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0004527","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.16.-"],"termid":"GO:0016797"}


id: GO:0099004
data:
  {"annotated_genes":["SJAG_03501","SJAG_03802","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112258,112594,114291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calmodulin dependent kinase signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004","terms_by_termid":{"GO:0061762":null}}


id: GO:0031673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments.","definition_xrefs":["ISBN:0321204131","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"H zone","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"H band","type":"exact"},{"name":"H disc","type":"exact"}],"termid":"GO:0031673"}


id: PBO:0066644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 2","termid":"PBO:0066644"}


id: PBO:0042921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormones, alpha polypeptide","termid":"PBO:0042921"}


id: GO:1903470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actomyosin contractile ring assembly that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:1234","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring assembly involved in mitotic cell cycle (obsolete GO:1903470)","synonyms":[{"name":"constriction ring assembly involved in mitotic cell cycle","type":"narrow"},{"name":"contractile ring assembly involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring formation involved in mitotic cell cycle","type":"related"},{"name":"cytokinesis, actomyosin ring biosynthesis involved in mitotic cell cycle","type":"related"},{"name":"cytokinesis, actomyosin ring formation involved in mitotic cell cycle","type":"related"},{"name":"cytokinesis, contractile ring assembly involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903470"}


id: GO:0016575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of acetyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation (obsolete GO:0016575)","termid":"GO:0016575"}


id: PBO:0108761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I termination factor Rtf1","termid":"PBO:0108761"}


id: PBO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27 (predicted)","termid":"PBO:0000971"}


id: GO:0009522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).","definition_xrefs":["ISBN:0140514031","PMID:9821949","GOC:mah","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I","termid":"GO:0009522"}


id: PBO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0085013"}


id: GO:0070100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"negatively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"negative regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070100"}


id: PATO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000254 vibrissae reflex (obsolete PATO:0000254)","termid":"PATO:0000254"}


id: GO:0035710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a CD4-positive, alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:BHF","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}


id: PBO:0063151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX6 upstream antisense RNA","termid":"PBO:0063151"}


id: GO:0048368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm development","synonyms":[{"name":"lateral plate mesoderm development","type":"exact"}],"termid":"GO:0048368"}


id: PBO:0067101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 143, pseudogene","termid":"PBO:0067101"}


id: GO:1901180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spheroidene.","definition_xrefs":["UniPathway:UPA00683","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"spheroidene metabolic process","termid":"GO:1901178"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"spheroidene biosynthetic process","synonyms":[{"name":"spheroidene anabolism","type":"exact"},{"name":"spheroidene biosynthesis","type":"exact"},{"name":"spheroidene formation","type":"exact"},{"name":"spheroidene synthesis","type":"exact"}],"termid":"GO:1901180"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: PBO:0055574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3010","termid":"PBO:0055574"}


id: PBO:0082040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-enoyl thioester reductase; member of the medium chain dehydrogenase/reductase family; localized to mitochondria, where it has a probable role in fatty acid synthesis; human MECR functionally complements the respiratory growth defect of the null mutant","termid":"PBO:0082040"}


id: PR:O94363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein Rheb that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02469","PANTHER:PTHR24070:SF274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rhb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.16c","secondary_identifiers":["UniProtKB:O94363"],"synonyms":[{"name":"GTP-binding protein Rheb homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RHEB","type":"exact"}],"termid":"PR:O94363"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: PBO:0040245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4A cysteine peptidase","termid":"PBO:0040245"}


id: GO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of T cell receptor signaling pathway","synonyms":[{"name":"activation of T cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of T cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of TCR signaling pathway","type":"exact"},{"name":"stimulation of T cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of T cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"upregulation of T cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050862"}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: GO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation in another organism (obsolete GO:0044646)","synonyms":[{"name":"envenomation resulting in modulation of complement activation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044646"}


id: FYPO:0003209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to cell tip, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell end, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003209"}


id: PBO:0071627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 46","termid":"PBO:0071627"}


id: PR:Q9US36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein klf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.05c","synonyms":[{"name":"Spom972h-klf1","type":"exact"},{"name":"krueppel-like zinc finger transcription factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US36"}


id: PBO:0047385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 22","termid":"PBO:0047385"}


id: PBO:0073488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1 pseudogene 1","termid":"PBO:0073488"}


id: PBO:0038809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 15","termid":"PBO:0038809"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:8455631","GOC:TermGenie","PMID:19233144"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: GO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cinnamyl alcohol + NADP+ = cinnamaldehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cinnamyl-alcohol dehydrogenase activity","secondary_identifiers":["RHEA:10392","MetaCyc:CINNAMYL-ALCOHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"CAD activity","type":"broad"},{"name":"cinnamyl alcohol dehydrogenase activity","type":"related"},{"name":"cinnamyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0045551"}


id: PBO:0049019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1","termid":"PBO:0049019"}


id: PBO:0085315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerol phospholipase C; regulates phosphatidylglycerol (PG) accumulation via a phospholipase C-type degradation mechanism; PG levels affect mitochondrial function; contains glycerophosphodiester phosphodiesterase motifs","termid":"PBO:0085315"}


id: PBO:0044116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 2","termid":"PBO:0044116"}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: GO:1905168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12023299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"activation of HDR","type":"narrow"},{"name":"activation of HRR","type":"narrow"},{"name":"activation of Rad51-dependent recombinational repair","type":"narrow"},{"name":"activation of Rhp51-dependent recombinational repair","type":"narrow"},{"name":"activation of double-strand break repair via homologous recombination","type":"narrow"},{"name":"activation of homologous recombinational repair","type":"narrow"},{"name":"activation of homology-directed repair","type":"narrow"},{"name":"positive regulation of HDR","type":"exact"},{"name":"positive regulation of HRR","type":"exact"},{"name":"positive regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of homologous recombinational repair","type":"exact"},{"name":"positive regulation of homology-directed repair","type":"exact"},{"name":"up regulation of HDR","type":"exact"},{"name":"up regulation of HRR","type":"exact"},{"name":"up regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up regulation of homologous recombinational repair","type":"exact"},{"name":"up regulation of homology-directed repair","type":"exact"},{"name":"up-regulation of HDR","type":"exact"},{"name":"up-regulation of HRR","type":"exact"},{"name":"up-regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of homologous recombinational repair","type":"exact"},{"name":"up-regulation of homology-directed repair","type":"exact"},{"name":"upregulation of HDR","type":"exact"},{"name":"upregulation of HRR","type":"exact"},{"name":"upregulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"upregulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"upregulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of homologous recombinational repair","type":"exact"},{"name":"upregulation of homology-directed repair","type":"exact"}],"termid":"GO:1905168"}


