# terms

id: PBO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2","termid":"PBO:0060747"}


id: GO:0006113
data:
  {"annotated_genes":["SJAG_04495","SJAG_03743","SJAG_03370","SJAG_03822","SJAG_00240","SJAG_01414","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019660"},{"annotations":[94856,94857,84697,110728,110727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92715],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic enzymatic conversion of organic compounds, especially carbohydrates, coupling the oxidation and reduction of NAD/H and the generation of adenosine triphosphate (ATP).","definition_xrefs":["GOC:curators","ISBN:0201090910","MetaCyc:Fermentation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04495":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"fermentation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FERMENTATION-PWY","Wikipedia:Fermentation_(biochemistry)"],"termid":"GO:0006113","terms_by_termid":{"GO:0019655":null,"GO:0019660":null,"GO:2001172":null}}


id: GO:0033265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choline, the amine 2-hydroxy-N,N,N-trimethylethanaminium.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"choline binding","termid":"GO:0033265"}


id: PBO:0080800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 6","termid":"PBO:0080800"}


id: PBO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-galactosyltransferase Gmh4","termid":"PBO:0090214"}


id: PBO:0053134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 1","termid":"PBO:0053134"}


id: PBO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 4","termid":"PBO:0070734"}


id: PBO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-beta-N-acetylglucosaminidase","termid":"PBO:0046314"}


id: PBO:0091632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, pdc102-antisense","termid":"PBO:0091632"}


id: PBO:0071617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 35","termid":"PBO:0071617"}


id: PBO:0028172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_error-free_double-strand_break_repair","termid":"PBO:0028172"}


id: PBO:0040633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 2","termid":"PBO:0040633"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: PBO:0039726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3H","termid":"PBO:0039726"}


id: PBO:0070023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1320, pseudogene","termid":"PBO:0070023"}


id: PBO:0049642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 45","termid":"PBO:0049642"}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["PMID:15572351","GOC:hjd","GOC:TermGenie","PMID:15723341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


id: MOD:00290
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["PubMed:7854413","RESID:AA0285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N3'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00290"}


id: PBO:0065496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 1","termid":"PBO:0065496"}


id: PBO:0081723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF652 antisense RNA 1","termid":"PBO:0081723"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: PBO:0089484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Mbx1","termid":"PBO:0089484"}


id: PBO:0090526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa4","termid":"PBO:0090526"}


id: GO:0021838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the directional movement of interneuron precursors from the subpallium to the cortex.","definition_xrefs":["GO_REF:0000021","PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"motogenic signaling involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"motogenic signalling involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021838"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: PBO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 6","termid":"PBO:0043646"}


id: PBO:0074051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 31","termid":"PBO:0074051"}


id: PBO:0068907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 150, pseudogene","termid":"PBO:0068907"}


id: PBO:0080757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xg glycoprotein (Xg blood group)","termid":"PBO:0080757"}


id: PBO:0042597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 12","termid":"PBO:0042597"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: PBO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-40 (pseudogene)","termid":"PBO:0051221"}


id: GO:0004399
data:
  {"annotated_genes":["SJAG_01137"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100962],"is_not":false,"summary":null,"term":"GO:0004399"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol + NAD+ = L-histidine + NADH + H+.","definition_xrefs":["EC:1.1.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"histidinol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:20641","MetaCyc:HISTOLDEHYD-RXN","MetaCyc:HISTALDEHYD-RXN"],"termid":"GO:0004399","terms_by_termid":{"GO:0004399":null}}


id: PBO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-transcribed with divergently orientated functionally related gene","termid":"PBO:0000631"}


id: PBO:0067466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 594, pseudogene","termid":"PBO:0067466"}


id: PBO:0077665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11b","termid":"PBO:0077665"}


id: GO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-alpha-hydroxysteroid = 16-beta-hydroxysteroid.","definition_xrefs":["EC:5.1.99.2","MetaCyc:16-HYDROXYSTEROID-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"16-hydroxysteroid epimerase activity","secondary_identifiers":["RHEA:15829"],"synonyms":[{"name":"16-hydroxysteroid 16-epimerase activity","type":"related"}],"termid":"GO:0047524"}


id: GO:0047347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + NDP = phosphate + NDP-aldose.","definition_xrefs":["MetaCyc:2.7.7.37-RXN","EC:2.7.7.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"aldose-1-phosphate nucleotidyltransferase activity","synonyms":[{"name":"NDP sugar phosphorylase activity","type":"related"},{"name":"NDP-aldose phosphorylase activity","type":"related"},{"name":"NDP-sugar phosphorylase activity","type":"broad"},{"name":"NDP:aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDPaldose phosphorylase activity","type":"related"},{"name":"glucose 1-phosphate inosityltransferase activity","type":"related"},{"name":"nucleoside diphosphate sugar:orthophosphate nucleotidyltransferase activity","type":"related"},{"name":"nucleoside diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar nucleotide phosphorylase activity","type":"related"},{"name":"sugar phosphate nucleotidyltransferase activity","type":"related"},{"name":"sugar-1-phosphate nucleotidyltransferase activity","type":"broad"}],"termid":"GO:0047347"}


id: GO:0010873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of cholesterol esterification. Cholesterol esterification is the lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and cholesterol. In the blood this process is associated with the conversion of free cholesterol into cholesteryl ester, which is then sequestered into the core of a lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cholesterol esterification (obsolete GO:0010873)","termid":"GO:0010873"}


id: PBO:0076244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 5","termid":"PBO:0076244"}


id: PBO:0086152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery","termid":"PBO:0086152"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: PBO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U3B","termid":"PBO:0004740"}


id: PBO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2","termid":"PBO:0046118"}


id: PBO:0067091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 127, pseudogene","termid":"PBO:0067091"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: PBO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 56 pseudogene","termid":"PBO:0070142"}


id: GO:2001151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of renal water transport","termid":"GO:2001151"}


id: PBO:0062710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 2 pseudogene","termid":"PBO:0062710"}


id: PBO:0090006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34","termid":"PBO:0090006"}


id: PBO:0079075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-3","termid":"PBO:0079075"}


id: SO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a minus 1 frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_1_frameshift","termid":"SO:0000866"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_1_frameshift","synonyms":[{"name":"mRNA with minus 1 frameshift","type":"exact"}],"termid":"SO:0000282"}


id: GO:0160138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2604) in 23S rRNA = pseudouridine(2604) in 23S rRNA.","definition_xrefs":["EC:5.4.99.21","RHEA:38875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2604) synthase activity","termid":"GO:0160138"}


id: GO:0097602
data:
  {"annotated_genes":["SJAG_00341","SJAG_03219","SJAG_05236","SJAG_00033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72144,73314,73322,76239],"is_not":false,"summary":null,"term":"GO:0097602"}]},"cv_name":"molecular_function","definition":"Binding to a member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).","definition_xrefs":["PMID:18698375","GOC:ha","InterPro:IPR016158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00341":null,"SJAG_03219":null,"SJAG_05236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cullin family protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cullin binding","type":"narrow"}],"termid":"GO:0097602","terms_by_termid":{"GO:0097602":null}}


id: GO:0150075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150075"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: PBO:0068515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 107, pseudogene","termid":"PBO:0068515"}


id: GO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of leaf primordia around the center of a shoot apical meristem.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf phyllotactic patterning","termid":"GO:0060772"}


id: GO:0034075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene + H2O = arabidiol ((13R,14R,17E)-malabarica-17,21-diene-3beta,14-diol).","definition_xrefs":["PMID:17474751","PMID:16774269","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"arabidiol synthase activity","secondary_identifiers":["MetaCyc:RXN-9684","RHEA:31035","EC:4.2.1.124"],"termid":"GO:0034075"}


id: GO:0019853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-882"],"synonyms":[{"name":"L-ascorbic acid anabolism","type":"exact"},{"name":"L-ascorbic acid biosynthesis","type":"exact"},{"name":"L-ascorbic acid formation","type":"exact"},{"name":"L-ascorbic acid synthesis","type":"exact"},{"name":"ascorbate biosynthesis","type":"exact"},{"name":"ascorbate biosynthetic process","type":"exact"},{"name":"vitamin C biosynthesis","type":"exact"},{"name":"vitamin C biosynthetic process","type":"exact"}],"termid":"GO:0019853"}


id: PBO:0077989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformer 2 alpha homolog","termid":"PBO:0077989"}


id: PBO:0084243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner nuclear membrane (INM) protein; contains helix-extension-helix (HEH) motif, nuclear localization signal sequence; targeting to the INM requires the Srp1p-Kap95p karyopherins and the Ran cycle; HEH2 has a paralog, SRC1, that arose from the whole genome duplication","termid":"PBO:0084243"}


id: GO:0004030
data:
  {"annotated_genes":["SJAG_00482","SJAG_02961","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75061,96992,102944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5692283","MetaCyc:ALDEHYDE-DEHYDROGENASE-NADP+-RXN","Reactome:R-HSA-6808464","Reactome:R-HSA-5696080"],"synonyms":[{"name":"ALDH","type":"related"},{"name":"aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0004030","terms_by_termid":{"GO:0004029":null}}


id: GO:1903724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:TermGenie","PMID:20616062","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of centriole replication","termid":"GO:0046601"},{"relation_name":"is_a","term_name":"regulation of centriole elongation","termid":"GO:1903722"},{"relation_name":"positively_regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of centriole elongation","synonyms":[{"name":"activation of centriole elongation","type":"narrow"},{"name":"up regulation of centriole elongation","type":"exact"},{"name":"up-regulation of centriole elongation","type":"exact"},{"name":"upregulation of centriole elongation","type":"exact"}],"termid":"GO:1903724"}


id: PBO:0079735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 1","termid":"PBO:0079735"}


id: PBO:0060846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEGR1 intronic transcript 1","termid":"PBO:0060846"}


id: PBO:0039874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 31","termid":"PBO:0039874"}


id: PBO:0078941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 8-1","termid":"PBO:0078941"}


id: GO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. An example of this component is found in Mus musculus.","definition_xrefs":["PMID:9395502","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0019910"}


id: PBO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1","termid":"PBO:0048473"}


id: GO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"pteridine biosynthetic process","synonyms":[{"name":"pteridine anabolism","type":"exact"},{"name":"pteridine biosynthesis","type":"exact"},{"name":"pteridine formation","type":"exact"},{"name":"pteridine synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0006728"}


id: PBO:0089584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain","termid":"PBO:0089584"}


id: GO:0099577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"},{"relation_name":"is_a","term_name":"regulation of translation at presynapse","termid":"GO:0140244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0010467"],"is_obsolete":false,"name":"regulation of translation at presynapse, modulating synaptic transmission","termid":"GO:0099577"}


id: GO:2000163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000163)","termid":"GO:2000163"}


id: PBO:0091304
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript with all introns spliced represents 85% of total mRNA","termid":"PBO:0091304"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: PATO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000850 relative auditory ability (obsolete PATO:0000850)","termid":"PATO:0000850"}


id: PBO:0044156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase 1","termid":"PBO:0044156"}


id: PBO:0046942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member D","termid":"PBO:0046942"}


id: PBO:0080364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 19, pseudogene","termid":"PBO:0080364"}


id: PBO:0073916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 6","termid":"PBO:0073916"}


id: PATO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of the thermal energy of a system.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature","termid":"PATO:0000146"}


id: PR:Q09329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mlo2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.05","secondary_identifiers":["UniProtKB:Q09329"],"synonyms":[{"name":"Spom972h-UBR7","type":"exact"}],"termid":"PR:Q09329"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: PBO:0054498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1898","termid":"PBO:0054498"}


id: PBO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase (predicted)","termid":"PBO:0000417"}


id: PBO:0003319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp31","termid":"PBO:0003319"}


id: GO:0045833
data:
  {"annotated_genes":["SJAG_03940","SJAG_03130","SJAG_01187","SJAG_02104","SJAG_02380","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[111585,107497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108870,105867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"negatively_regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of lipid metabolic process","type":"exact"},{"name":"down-regulation of lipid metabolic process","type":"exact"},{"name":"downregulation of lipid metabolic process","type":"exact"},{"name":"inhibition of lipid metabolic process","type":"narrow"},{"name":"negative regulation of lipid metabolism","type":"exact"}],"termid":"GO:0045833","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0071072":null,"GO:2001211":null}}


id: GO:0032906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta2 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta2 production","synonyms":[{"name":"TGF-B2 production","type":"exact"},{"name":"TGFB2 production","type":"exact"},{"name":"transforming growth factor-beta2 production","type":"exact"}],"termid":"GO:0032906"}


id: GO:0072305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072040"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900212"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072305"}


id: GO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde-3-phosphate + H2O + 2 oxidized ferredoxin = 3-phospho-D-glycerate + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["PMID:7721730","RHEA:24148","PMID:11265456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) activity","secondary_identifiers":["MetaCyc:1.2.7.6-RXN","EC:1.2.7.6"],"synonyms":[{"name":"GAPOR","type":"related"},{"name":"D-glyceraldehyde-3-phosphate:ferredoxin oxidoreductase activity","type":"exact"},{"name":"glyceraldehyde-3-phosphate Fd oxidoreductase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate ferredoxin reductase activity","type":"related"}],"termid":"GO:0043797"}


id: PBO:0108932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 23, arginine","termid":"PBO:0108932"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: GO:0051209
data:
  {"annotated_genes":["SJAG_00321","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89522],"is_not":false,"summary":null,"term":"GO:0051209"},{"annotations":[104799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment.","definition_xrefs":["GOC:dph","GOC:hjd","PMID:1814929","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sequestering of calcium ion","termid":"GO:0051283"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) mobilization","type":"broad"},{"name":"calcium mobilization","type":"broad"},{"name":"cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+)","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051209","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: PBO:0047392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 32","termid":"PBO:0047392"}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: PBO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.83","termid":"PBO:0001844"}


id: PBO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5","termid":"PBO:0042967"}


id: GO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ribulose bisphosphate carboxylase complex.","definition_xrefs":["PMID:29396988","GOC:tb","GOC:krc","PMID:29589905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"ribulose bisphosphate carboxylase complex assembly","synonyms":[{"name":"RuBisCO assembly","type":"exact"}],"termid":"GO:0110102"}


id: PBO:0054295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1686","termid":"PBO:0054295"}


id: FYPO:0007489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the cytosol instead.","definition_xrefs":["PomBase:mah","PMID:32918581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to cytosol","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to cytosol","type":"exact"}],"termid":"FYPO:0007489"}


id: PR:O74369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- css1 gene.","definition_xrefs":["UniProtKB:O74369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipids phospholipase C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.01c","synonyms":[{"name":"IPS phospholipase C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPS-PLC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-css1","type":"exact"}],"termid":"PR:O74369"}


id: FYPO:0004663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability following cellular response to methyl methanesulfonate","synonyms":[{"name":"normal viability following MMS exposure","type":"exact"},{"name":"normal cell population viability following cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal viability following cellular response to MMS","type":"exact"},{"name":"normal viability following cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0004663"}


id: FYPO:0005423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal during anaphase A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization during mitotic anaphase A","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe during anaphase A","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation during anaphase A","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during anaphase A during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during movement of chromosomes towards separated spindle pole bodies","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage during anaphase A","type":"related"},{"name":"decreased spindle microtubule depolymerization during anaphase A during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization during anaphase A","type":"exact"}],"termid":"FYPO:0005423"}


id: PBO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 28","termid":"PBO:0050326"}


id: FYPO:0007253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding to a lipid in a membrane by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished lipid binding","termid":"FYPO:0006937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished membrane lipid binding","synonyms":[{"name":"abolished binding to lipid in membrane","type":"exact"},{"name":"membrane lipid binding abolished","type":"exact"}],"termid":"FYPO:0007253"}


id: GO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete streptomycin susceptibility/resistance (obsolete GO:0019881)","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"exact"}],"termid":"GO:0019881"}


id: PBO:0003096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg2","termid":"PBO:0003096"}


id: PBO:0075809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 2","termid":"PBO:0075809"}


id: PBO:0040388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B2","termid":"PBO:0040388"}


id: GO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications in the zygote following fertilization. The paternal genome undergoes active DNA demethylation before the first cell division, while the adjacent maternal genome is protected from this process.","definition_xrefs":["GOC:sp","PMID:22868271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming of gene expression","termid":"GO:0043045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"epigenetic programming in the zygotic pronuclei","synonyms":[{"name":"chromatin reprogramming in the zygote","type":"exact"}],"termid":"GO:0044725"}


id: GO:0070670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-4","synonyms":[{"name":"response to IL-4","type":"exact"}],"termid":"GO:0070670"}


id: FYPO:0007703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"abolished protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell side during glucose starvation","type":"related"},{"name":"abolished protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"abolished protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"protein localization to lateral cell cortex during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0007703"}


id: PBO:0052143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 1","termid":"PBO:0052143"}


id: GO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foregut region specified to become the lung forms the initial left and right buds.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary lung bud formation","synonyms":[{"name":"lung formation","type":"exact"}],"termid":"GO:0060431"}


id: GO:1904734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of electron transfer activity.","definition_xrefs":["PMID:25416781","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of electron transfer activity","termid":"GO:1904732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of electron transfer activity","synonyms":[{"name":"activation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"activation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"activation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"activation of amicyanin","type":"narrow"},{"name":"activation of azurin","type":"narrow"},{"name":"activation of bacterial-type ferredoxin","type":"narrow"},{"name":"activation of chloroplast-type ferredoxin","type":"narrow"},{"name":"activation of copper electron carrier","type":"narrow"},{"name":"activation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of electron acceptor activity","type":"narrow"},{"name":"activation of electron carrier activity","type":"narrow"},{"name":"activation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"activation of electron donor activity","type":"narrow"},{"name":"activation of electron transfer flavoprotein","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"activation of electron transporter activity","type":"narrow"},{"name":"activation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"activation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"activation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of mononuclear iron electron carrier","type":"narrow"},{"name":"activation of polyferredoxin","type":"narrow"},{"name":"activation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"activation of rubredoxin","type":"narrow"},{"name":"activation of small blue copper electron carrier","type":"narrow"},{"name":"activation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"positive regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"positive regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"positive regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"positive regulation of amicyanin","type":"narrow"},{"name":"positive regulation of azurin","type":"narrow"},{"name":"positive regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"positive regulation of copper electron carrier","type":"narrow"},{"name":"positive regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of electron acceptor activity","type":"narrow"},{"name":"positive regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"positive regulation of electron donor activity","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"positive regulation of electron transporter activity","type":"related"},{"name":"positive regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"positive regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"positive regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"positive regulation of polyferredoxin","type":"narrow"},{"name":"positive regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"positive regulation of rubredoxin","type":"narrow"},{"name":"positive regulation of small blue copper electron carrier","type":"narrow"},{"name":"positive regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up regulation of amicyanin","type":"narrow"},{"name":"up regulation of azurin","type":"narrow"},{"name":"up regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up regulation of copper electron carrier","type":"narrow"},{"name":"up regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of electron acceptor activity","type":"narrow"},{"name":"up regulation of electron carrier activity","type":"related"},{"name":"up regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up regulation of electron donor activity","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up regulation of electron transporter activity","type":"related"},{"name":"up regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up regulation of polyferredoxin","type":"narrow"},{"name":"up regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up regulation of rubredoxin","type":"narrow"},{"name":"up regulation of small blue copper electron carrier","type":"narrow"},{"name":"up regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up-regulation of amicyanin","type":"narrow"},{"name":"up-regulation of azurin","type":"narrow"},{"name":"up-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up-regulation of copper electron carrier","type":"narrow"},{"name":"up-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of electron acceptor activity","type":"narrow"},{"name":"up-regulation of electron carrier activity","type":"related"},{"name":"up-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up-regulation of electron donor activity","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up-regulation of electron transporter activity","type":"related"},{"name":"up-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up-regulation of polyferredoxin","type":"narrow"},{"name":"up-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up-regulation of rubredoxin","type":"narrow"},{"name":"up-regulation of small blue copper electron carrier","type":"narrow"},{"name":"up-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"upregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"upregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"upregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"upregulation of amicyanin","type":"narrow"},{"name":"upregulation of azurin","type":"narrow"},{"name":"upregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"upregulation of copper electron carrier","type":"narrow"},{"name":"upregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of electron acceptor activity","type":"narrow"},{"name":"upregulation of electron carrier activity","type":"related"},{"name":"upregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"upregulation of electron donor activity","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"upregulation of electron transporter activity","type":"related"},{"name":"upregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"upregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"upregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"upregulation of polyferredoxin","type":"narrow"},{"name":"upregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"upregulation of rubredoxin","type":"narrow"},{"name":"upregulation of small blue copper electron carrier","type":"narrow"},{"name":"upregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904734"}


id: PR:O60052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00766","PANTHER:PTHR11129:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.04c","secondary_identifiers":["UniProtKB:O60052"],"synonyms":[{"name":"CAAX farnesyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGTase-I-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FNTA","type":"exact"},{"name":"ras proteins prenyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I protein geranyl-geranyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60052"}


id: PBO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0072645"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103347],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140101","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:20301","MetaCyc:ARGININE--TRNA-LIGASE-RXN","Reactome:R-HSA-379993","Reactome:R-HSA-380224"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: PBO:0036241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin-like membrane trafficking protein Mug65 (predicted)","termid":"PBO:0036241"}


id: PBO:0045145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 2","termid":"PBO:0045145"}


id: PR:Q9P6R7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13E7.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vts1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.03c","synonyms":[{"name":"Spom972h-SPBC13E7.03c","type":"exact"}],"termid":"PR:Q9P6R7"}


id: GO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).","definition_xrefs":["GOC:jl","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in gastrulation","termid":"GO:0042074"}


id: GO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dADP, deoxyadenosine diphosphate, to produce dATP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dADP phosphorylation (obsolete GO:0006174)","termid":"GO:0006174"}


id: PATO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of certain surfaces which appear to change colour as the angle of view changes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridescent","termid":"PATO:0002277"}


id: PBO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 3","termid":"PBO:0072228"}


id: PBO:0059476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin like","termid":"PBO:0059476"}


id: GO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling in response to host (obsolete GO:0075174)","synonyms":[{"name":"regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075174"}


id: GO:0140104
data:
  {"annotated_genes":["SJAG_00914","SJAG_02798","SJAG_04692","SJAG_00532","SJAG_02348","SJAG_00925","SJAG_00259","SJAG_01122","SJAG_03296","SJAG_01496","SJAG_02425","SJAG_03128","SJAG_02361","SJAG_01405","SJAG_02895","SJAG_03693","SJAG_03662","SJAG_02035","SJAG_03862","SJAG_04366","SJAG_05302","SJAG_03366","SJAG_00840","SJAG_01240","SJAG_03231","SJAG_02571","SJAG_01005","SJAG_04403","SJAG_03867","SJAG_02661","SJAG_04553","SJAG_00913","SJAG_02416","SJAG_04758","SJAG_01358","SJAG_03959","SJAG_01178","SJAG_01909","SJAG_02698","SJAG_04038","SJAG_03798","SJAG_01083","SJAG_04670","SJAG_02314","SJAG_01534","SJAG_04272","SJAG_00968","SJAG_02998","SJAG_00277","SJAG_00942","SJAG_04257","SJAG_00586","SJAG_01789","SJAG_00170","SJAG_04547","SJAG_02065","SJAG_04561","SJAG_01940","SJAG_02439","SJAG_03470","SJAG_04180","SJAG_00569","SJAG_05300","SJAG_02994","SJAG_01238","SJAG_01418","SJAG_02437","SJAG_02198","SJAG_04411","SJAG_03905","SJAG_00449","SJAG_03633","SJAG_02906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"},{"annotations":[95066,96158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[94378,84180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[90750,99695,92589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[89269,98252,85210,103617,100837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[104239,109738,113015,94286,107401,107400,109739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[108934,91591,110662,91212,99696,104916,111196,114042,88528,90962,106361,104911,103869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"},{"annotations":[114043,109740,105805,91457,86246,107309,99038,85010,90753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140713"},{"annotations":[110010,96697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[89099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140132"},{"annotations":[99644,108381,90966,109480,106543,107923,110809,84123,107133,84145,97040,110250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032977"},{"annotations":[104602,109663,92649,113355,87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[110578,98684,111941,91904,92650,85603,89540,103060,113356,114772,99802,88073,89597,99511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"},{"annotations":[100928,95138,100261,114684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140597"},{"annotations":[89271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":73,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00277":null,"SJAG_00449":null,"SJAG_00532":null,"SJAG_00569":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_00968":null,"SJAG_01005":null,"SJAG_01083":null,"SJAG_01122":null,"SJAG_01178":null,"SJAG_01238":null,"SJAG_01240":null,"SJAG_01358":null,"SJAG_01405":null,"SJAG_01418":null,"SJAG_01496":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01940":null,"SJAG_02035":null,"SJAG_02065":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02361":null,"SJAG_02416":null,"SJAG_02425":null,"SJAG_02437":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02661":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02895":null,"SJAG_02906":null,"SJAG_02994":null,"SJAG_02998":null,"SJAG_03128":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03366":null,"SJAG_03470":null,"SJAG_03633":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03798":null,"SJAG_03862":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_03959":null,"SJAG_04038":null,"SJAG_04180":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04366":null,"SJAG_04403":null,"SJAG_04411":null,"SJAG_04547":null,"SJAG_04553":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular carrier activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140104","terms_by_termid":{"GO:0000036":null,"GO:0000510":null,"GO:0000511":null,"GO:0005049":null,"GO:0016531":null,"GO:0016532":null,"GO:0032977":null,"GO:0034986":null,"GO:0061608":null,"GO:0140132":null,"GO:0140597":null,"GO:0140663":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: FYPO:0007907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795nPomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during amino acid starvation","termid":"FYPO:0007907"}


id: GO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a beta-sitosterol = UDP + O-glucosyl-beta-sitosterol.","definition_xrefs":["RHEA:61832","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 3-beta-glucosyltransferase activity","termid":"GO:0016906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-sitosterol UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12128"],"termid":"GO:0051507"}


id: GO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of N-terminal peptidyl-cysteine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-cysteine deamination","termid":"GO:0018060"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: PBO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 4","termid":"PBO:0050742"}


id: PBO:0087616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus; required for replication slow zone (RSZ) breakage following Mec1p inactivation","termid":"PBO:0087616"}


id: SO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that modulates the transcription of a gene or genes.","definition_xrefs":["PMID:9679020","SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional_cis_regulatory_region","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:transcriptional_cis_regulatory_region","type":"exact"},{"name":"transcription-control region","type":"exact"},{"name":"transcriptional cis regulatory region","type":"exact"}],"termid":"SO:0001055"}


id: GO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the embryonic placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}


id: PATO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000657 length_quantity (obsolete PATO:0000657)","termid":"PATO:0000657"}


id: PBO:0040635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX1 divergent transcript","termid":"PBO:0040635"}


id: SO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region at a non-allelic position where exchange of genetic material happens as a result of homologous recombination.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_hotspot","termid":"SO:0000339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_allelic_homologous_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:non_allelic_homologous","type":"exact"},{"name":"INSDC_qualifier:non_allelic_homologous_recombination","type":"exact"},{"name":"NAHRR","type":"exact"},{"name":"non allelic homologous recombination region","type":"exact"}],"termid":"SO:0002094"}


id: GO:0047178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-radyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-radyl-2-acyl-sn-glycero-3-phosphocholine = 1-radyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["MetaCyc:2.3.1.148-RXN","EC:2.3.1.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycerophospholipid acyltransferase (CoA-dependent) activity","secondary_identifiers":["RHEA:20972"],"synonyms":[{"name":"1-organyl-2-acyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine acyltransferase (CoA-dependent)","type":"related"}],"termid":"GO:0047178"}


id: PBO:0053166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver enriched antimicrobial peptide 2","termid":"PBO:0053166"}


id: PBO:0086513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0086513"}


id: GO:1901523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of icosanoid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"icosanoid catabolic process","synonyms":[{"name":"icosanoid breakdown","type":"exact"},{"name":"icosanoid catabolism","type":"exact"},{"name":"icosanoid degradation","type":"exact"}],"termid":"GO:1901523"}


id: PBO:0038663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase bubblegum family member 2","termid":"PBO:0038663"}


id: GO:0015549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of carbonyl cyanide m-chlorophenylhydrazone from one side of a membrane to the other. Carbonyl cyanide m-chlorophenylhydrazone is a proton ionophore, commonly used as an uncoupling agent and inhibitor of photosynthesis because of its effects on mitochondrial and chloroplast membranes.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl cyanide m-chlorophenylhydrazone transmembrane transporter activity (obsolete GO:0015549)","synonyms":[{"name":"CCCP transporter activity","type":"exact"},{"name":"carbonyl cyanide m-chlorophenylhydrazone transporter activity","type":"related"},{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015549"}


id: PBO:0084886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial thioredoxin; highly conserved oxidoreductase required to maintain the redox homeostasis of the cell, forms the mitochondrial thioredoxin system with Trr2p, redox state is maintained by both Trr2p and Glr1p","termid":"PBO:0084886"}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: PBO:0084560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Mba1p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with the mitochondrial large ribosomal subunit and nascent polypeptide chains; null mutant displays increased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084560"}


id: PBO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 5","termid":"PBO:0042468"}


id: FYPO:0006162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during meiosis I","synonyms":[{"name":"normal protein localisation to chromatin during meiosis I","type":"exact"},{"name":"normal protein localization to chromatin during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006162"}


id: GO:0042147
data:
  {"annotated_genes":["SJAG_04902","SJAG_02852","SJAG_03504","SJAG_01809","SJAG_00379","SJAG_00971","SJAG_04565","SJAG_04219","SJAG_01448","SJAG_03963","SJAG_00287","SJAG_04359","SJAG_04609","SJAG_01039","SJAG_00314","SJAG_02193","SJAG_06588","SJAG_02277","SJAG_03756","SJAG_00632","SJAG_02811","SJAG_04112","SJAG_04023","SJAG_02177","SJAG_02823","SJAG_04629","SJAG_05030","SJAG_04275","SJAG_02750","SJAG_04552","SJAG_04822","SJAG_01645","SJAG_00143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85567,87345,88433,88460,91081,91237,91926,93021,93293,93887,94332,94821,95887,97255,97839,98262,98790,99561,101654,103123,103692,105312,105944,108911,109136,113075,114482,114571,114951,115082],"is_not":false,"summary":null,"term":"GO:0042147"},{"annotations":[111336,112540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[108586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.","definition_xrefs":["GOC:jl","PMID:10873832","PMID:16936697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00287":null,"SJAG_00314":null,"SJAG_00379":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01039":null,"SJAG_01448":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02193":null,"SJAG_02277":null,"SJAG_02750":null,"SJAG_02811":null,"SJAG_02823":null,"SJAG_02852":null,"SJAG_03504":null,"SJAG_03756":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04219":null,"SJAG_04275":null,"SJAG_04359":null,"SJAG_04552":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04629":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"retrograde transport, endosome to Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:0042147","terms_by_termid":{"GO:0034498":null,"GO:0034499":null,"GO:0042147":null}}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: PBO:0034164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_participant","termid":"PBO:0034164"}


id: GO:0033271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any phosphorylated myo-inositol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"myo-inositol phosphate transport","termid":"GO:0033271"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: GO:0023059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The positive regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive adaptation of signaling pathway","synonyms":[{"name":"positive adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023059"}


id: PR:Q9UTI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grx2 gene.","definition_xrefs":["UniProtKB:Q9UTI2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.09","synonyms":[{"name":"Spom972h-grx2","type":"exact"}],"termid":"PR:Q9UTI2"}


id: PBO:0052438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 3","termid":"PBO:0052438"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: GO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-delta T cell receptor activity (obsolete GO:0042099)","synonyms":[{"name":"gamma-delta T cell receptor activity","type":"exact"}],"termid":"GO:0042099"}


id: GO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure maturation","termid":"GO:0071695"}


id: GO:0031709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gastrin-releasing peptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"gastrin-releasing peptide receptor binding","synonyms":[{"name":"GRP receptor binding","type":"exact"},{"name":"gastrin-releasing peptide receptor ligand","type":"narrow"}],"termid":"GO:0031709"}


id: FYPO:0001434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N,N'-(p-xylylidene)bis-aminoguanidine 2HCl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","synonyms":[{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during mitotic cell cycle","type":"related"},{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during vegetative growth","type":"exact"},{"name":"resistant to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","type":"exact"}],"termid":"FYPO:0001434"}


id: PBO:0040721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 immune signaling adaptor","termid":"PBO:0040721"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: GO:0043337
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89175],"is_not":false,"summary":null,"term":"GO:0043337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + phosphatidylglycerol = CMP + diphosphatidylglycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"cardiolipin synthase (CMP-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483063","RHEA:32931","MetaCyc:RXN-8141","EC:2.7.8.41"],"synonyms":[{"name":"CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity","type":"exact"},{"name":"cardiolipin synthase","type":"broad"},{"name":"cardiolipin synthetase","type":"broad"}],"termid":"GO:0043337","terms_by_termid":{"GO:0043337":null}}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate-2-keto-4-methylthiobutyrate transaminase activity","termid":"GO:0046571"}


id: GO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.","definition_xrefs":["UM-BBD_pathwayID:cam"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-camphor metabolic process","synonyms":[{"name":"(+)-camphor metabolism","type":"exact"},{"name":"camphor metabolic process","type":"exact"},{"name":"camphor metabolism","type":"exact"}],"termid":"GO:0018882"}


id: GO:0022878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sucrose(out) = protein histidine + sucrose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0003824","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sucrose phosphotransferase system transporter activity","secondary_identifiers":["RHEA:49236","MetaCyc:SUCROSEPHOSPHO-RXN"],"synonyms":[{"name":"sucrose PTS transporter activity","type":"exact"}],"termid":"GO:0022878"}


id: GO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral genome replication","synonyms":[{"name":"down regulation of viral genome replication","type":"exact"},{"name":"down-regulation of viral genome replication","type":"exact"},{"name":"downregulation of viral genome replication","type":"exact"},{"name":"inhibition of viral genome replication","type":"narrow"}],"termid":"GO:0045071"}


id: PBO:0053285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA inflammatory and mucous response associated, antisense to ICAM1","termid":"PBO:0053285"}


id: GO:0097550
data:
  {"annotated_genes":["SJAG_01523","SJAG_03206","SJAG_03120"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86079,86428,99199],"is_not":false,"summary":null,"term":"GO:0097550"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex composed of proteins binding promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription.","definition_xrefs":["PMID:22751016","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01523":null,"SJAG_03120":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-templated transcriptional preinitiation complex","type":"exact"},{"name":"PIC","type":"narrow"},{"name":"preinitiation complex","type":"narrow"},{"name":"transcriptional pre-initiation complex","type":"exact"},{"name":"transcriptional preinitiation complex","type":"exact"}],"termid":"GO:0097550","terms_by_termid":{"GO:0097550":null}}


id: PBO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis-specific spindle pole body WD repeat protein Wdr8","termid":"PBO:0018266"}


id: SO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a match, for example an hsp from blast is a match_part.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"},{"relation_name":"part_of","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match_part","synonyms":[{"name":"match part","type":"exact"}],"termid":"SO:0000039"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: PBO:0089764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","termid":"PBO:0089764"}


id: GO:2000852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of corticosterone secretion","termid":"GO:2000852"}


id: FYPO:0006634
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115501,115513,115495],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115198],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"increased vegetative cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_02592","SJAG_00266","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","atf1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta"],"synonyms":[{"name":"increased cell length during vegetative growth","type":"exact"},{"name":"increased vegetative cell length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006634","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: GO:0061805
data:
  {"annotated_genes":["SJAG_04745","SJAG_00244","SJAG_00930","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90907,96512,99677],"is_not":false,"summary":null,"term":"GO:0061805"},{"annotations":[111164],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B.","definition_xrefs":["GOC:dph","GOC:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"part_of","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00930":null,"SJAG_02761":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic anaphase spindle elongation","type":"exact"},{"name":"mitotic spindle elongation during anaphase","type":"exact"},{"name":"mitotic spindle elongation during mitotic anaphase","type":"exact"}],"termid":"GO:0061805","terms_by_termid":{"GO:0061805":null,"GO:0110162":null}}


id: GO:0042622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the outer segment of a vertebrate photoreceptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"photoreceptor outer segment membrane","termid":"GO:0042622"}


id: PBO:0068032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 337","termid":"PBO:0068032"}


id: PBO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2 like","termid":"PBO:0075505"}


id: PBO:0002767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINT/PCI domain","termid":"PBO:0002767"}


id: PATO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000284 germ line dependent fertility (obsolete PATO:0000284)","termid":"PATO:0000284"}


id: GO:0019490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the sulfonate group from 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["UM-BBD_pathwayID:abs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminobenzenesulfonate metabolic process","termid":"GO:0018868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"2-aminobenzenesulfonate desulfonation","secondary_identifiers":["MetaCyc:2ASDEG-PWY"],"synonyms":[{"name":"2-aminobenzenesulphonate desulphonation","type":"exact"}],"termid":"GO:0019490"}


id: PBO:0065850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 1 pseudogene 1","termid":"PBO:0065850"}


id: GO:0140953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl27-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me.","definition_xrefs":["RHEA:60296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016741","GO:0003674","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.369"],"synonyms":[{"name":"histone H3-K27 methylation","type":"broad"},{"name":"histone H3-K27 monomethylase activity","type":"exact"},{"name":"histone H3K27 methylation","type":"broad"},{"name":"histone H3K27 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140953"}


id: PBO:0089662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic asparagine-tRNA ligase Nrs1","termid":"PBO:0089662"}


id: PR:O59825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G/U mismatch-specific uracil DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.05c","synonyms":[{"name":"Spom972h-thp1","type":"exact"},{"name":"uracil mismatch repair protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59825"}


id: GO:0003871
data:
  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96793],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["RHEA:21196","EC:2.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04405","MetaCyc:HOMOCYSMET-RXN"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: PATO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence which is higher than normal.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluorescent","termid":"PATO:0001290"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fluorescence","synonyms":[{"name":"high fluorescence","type":"exact"}],"termid":"PATO:0001926"}


id: GO:0032806
data:
  {"annotated_genes":["SJAG_03061","SJAG_00758","SJAG_04614","SJAG_01213","SJAG_03967","SJAG_04420","SJAG_00995","SJAG_00150","SJAG_03206","SJAG_02057","SJAG_00901","SJAG_04368","SJAG_01149","SJAG_03618","SJAG_01207","SJAG_00512"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113096,91942,107041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[105006,105166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[86427,88315,104613,111250,105114,102162,110944,86059,99281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[102163,108209,109095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex that phosphorylates amino acid residues of RNA polymerase II C-terminal domain repeats; phosphorylation occurs mainly on Ser2 and Ser5.","definition_xrefs":["PMID:16721054","PMID:17079683","PMID:15047695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03206":null,"SJAG_03618":null,"SJAG_03967":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"carboxy-terminal domain protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTDK complex","type":"exact"}],"termid":"GO:0032806","terms_by_termid":{"GO:0005675":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null}}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: PBO:0086402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication","termid":"PBO:0086402"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: FYPO:0007348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K36me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007348"}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: PBO:0078657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 10-1","termid":"PBO:0078657"}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[110296,113302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: PBO:0079912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 2","termid":"PBO:0079912"}


id: GO:1903371
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903373"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["GOC:als","PMID:24891604","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum tubular network organization","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"regulation of ER tubular network organisation","type":"exact"},{"name":"regulation of ER tubular network organization","type":"exact"},{"name":"regulation of endoplasmic reticulum tubular network organisation","type":"exact"}],"termid":"GO:1903371","terms_by_termid":{"GO:1903373":null}}


id: GO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion transport along microtubule","synonyms":[{"name":"mitochondrial migration along microtubule","type":"exact"},{"name":"mitochondrial transport along microtubule","type":"exact"}],"termid":"GO:0047497"}


id: GO:1903661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["GO_REF:0000058","PMID:24280217","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"},{"relation_name":"positively_regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement-dependent cytotoxicity","synonyms":[{"name":"activation of complement-dependent cytotoxicity","type":"narrow"},{"name":"up regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"up-regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"upregulation of complement-dependent cytotoxicity","type":"exact"}],"termid":"GO:1903661"}


id: PBO:0085601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; SDS23 has a paralog, SDS24, that arose from the whole genome duplication","termid":"PBO:0085601"}


id: GO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-hexaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-hexaprenyl-4-hydroxy-5-methoxybenzoate.","definition_xrefs":["EC:2.1.1.114"],"gene_count":0,"genotype_count":0,"name":"obsolete hexaprenyldihydroxybenzoate methyltransferase activity (obsolete GO:0004395)","termid":"GO:0004395"}


id: GO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class II biosynthetic process","synonyms":[{"name":"MHC class II anabolism","type":"exact"},{"name":"MHC class II biosynthesis","type":"exact"},{"name":"MHC class II formation","type":"exact"},{"name":"MHC class II synthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045342"}


id: GO:0042391
data:
  {"annotated_genes":["SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85681,92879],"is_not":false,"summary":null,"term":"GO:0042391"}]},"cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:mtg_cardio","GOC:jl","ISBN:0198506732","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042391","terms_by_termid":{"GO:0042391":null}}


id: GO:0033500
data:
  {"annotated_genes":["SJAG_01699","SJAG_02444","SJAG_03081","SJAG_01754","SJAG_04026","SJAG_00574","SJAG_04312","SJAG_01254","SJAG_04495","SJAG_04334","SJAG_00472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102971,102022,97973,105658,90363,102614,111636,105147,112677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[94137,90663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001678"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state of a carbohydrate within an organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033500","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: GO:0005825
data:
  {"annotated_genes":["SJAG_01760","SJAG_02737","SJAG_01215","SJAG_03835","SJAG_02609","SJAG_03544","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104972,105741,106710,108758,108962,111232,113040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061496"}]},"cv_name":"cellular_component","definition":"Structure adjacent to the plaques of the spindle pole body.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01760":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_03544":null,"SJAG_03835":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"half bridge of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005825","terms_by_termid":{"GO:0061496":null}}


id: PBO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 10","termid":"PBO:0046568"}


id: GO:0046008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}


id: PBO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 2","termid":"PBO:0052189"}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: PATO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's gradually tapering to a slender point.","direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attenuate","termid":"PATO:0001982"}


id: PBO:0040619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP and activin membrane bound inhibitor","termid":"PBO:0040619"}


id: PBO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 1","termid":"PBO:0043469"}


id: GO:0018667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexanone + NADPH + H+ + O2 = 6-hexanolide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexanone monooxygenase activity","secondary_identifiers":["RHEA:24068","UM-BBD_reactionID:r0166","MetaCyc:CYCLOHEXANONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cyclohexanone 1,2-monooxygenase activity","type":"exact"},{"name":"cyclohexanone oxygenase activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (6-hydroxylating, 1,2-lactonizing) activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (lactone-forming)","type":"related"}],"termid":"GO:0018667"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: FYPO:0000565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular respiration","synonyms":[{"name":"increased cellular respiration during mitotic cell cycle","type":"related"},{"name":"increased cellular respiration during vegetative growth","type":"exact"},{"name":"increased respiration","type":"broad"},{"name":"increased respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: increased","type":"related"}],"termid":"FYPO:0000565"}


id: PR:Q09783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim8 gene.","definition_xrefs":["UniProtKB:Q09783","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.04","synonyms":[{"name":"Spom972h-tim8","type":"exact"}],"termid":"PR:Q09783"}


id: GO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:dph","PMID:10358008","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate","synonyms":[{"name":"cardiac chronotropy","type":"exact"},{"name":"regulation of heart contraction rate","type":"exact"},{"name":"regulation of rate of heart contraction","type":"exact"}],"termid":"GO:0002027"}


id: GO:0009325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of nitrate from nitrite with the concomitant reduction of an acceptor.","definition_xrefs":["PMID:2139607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrate reductase complex","termid":"GO:0009325"}


id: PBO:0031298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_disassembly","termid":"PBO:0031298"}


id: PBO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha SNAP (predicted)","termid":"PBO:0002030"}


id: PBO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 136","termid":"PBO:0044855"}


id: PBO:0068897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 139, pseudogene","termid":"PBO:0068897"}


id: PBO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst2","termid":"PBO:0001381"}


id: PBO:0029239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin","termid":"PBO:0029239"}


id: PR:O59868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcium-transporting ATPase type 2C member 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02375","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.02c","secondary_identifiers":["UniProtKB:O59868"],"synonyms":[{"name":"Golgi Ca(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP2C1","type":"exact"}],"termid":"PR:O59868"}


id: PBO:0007850
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of nuclear proteasome","termid":"PBO:0007850"}


id: PBO:0049293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 12, pseudogene","termid":"PBO:0049293"}


id: PBO:0061709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 4","termid":"PBO:0061709"}


id: FYPO:0002827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"decreased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"decreased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0002827"}


id: PR:Q10096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.17 gene.","definition_xrefs":["UniProtKB:Q10096","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C11D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.17","synonyms":[{"name":"Spom972h-SPAC11D3.17","type":"exact"}],"termid":"PR:Q10096"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: GO:1904453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:11897793","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of potassium:proton exchanging ATPase activity","termid":"GO:1904451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium:proton exchanging ATPase activity","synonyms":[{"name":"activation of (K+ + H+)-ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (H+/K+-exchanging)","type":"narrow"},{"name":"activation of H+-K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of H+/K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of H,K-ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K+ ATPase","type":"narrow"},{"name":"activation of hydrogen/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"positive regulation of H+-K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H,K-ATPase activity","type":"exact"},{"name":"positive regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"positive regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"positive regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H,K-ATPase activity","type":"exact"},{"name":"up regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up-regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H,K-ATPase activity","type":"exact"},{"name":"up-regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up-regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up-regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"upregulation of H+-K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H,K-ATPase activity","type":"exact"},{"name":"upregulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"upregulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"upregulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1904453"}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PBO:0043608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper metabolism domain containing 1","termid":"PBO:0043608"}


id: PATO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001148 relative resistance value (obsolete PATO:0001148)","termid":"PATO:0001148"}


id: GO:1905430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:18984164","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycine","termid":"GO:1905429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycine","synonyms":[{"name":"cellular response to Gly","type":"exact"},{"name":"cellular response to aminoacetic acid","type":"exact"},{"name":"cellular response to aminoethanoic acid","type":"exact"},{"name":"cellular response to glycin","type":"exact"}],"termid":"GO:1905430"}


id: FYPO:0005657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"normal levels of meiotic crossover associated with a gene conversion event","type":"exact"}],"termid":"FYPO:0005657"}


id: GO:0061720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfolactaldehyde (SLA).","definition_xrefs":["GOC:dph","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde","termid":"GO:0061720"}


id: PBO:0085667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0085667"}


id: GO:0062022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ATP-dependent protein localization to chromatin by which a cohesin ring complex is topologically linked to ssDNA (lagging strand) which is already linked to a dsDNA (leading strand) molecule as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cohesin loading","termid":"GO:0061780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"second-DNA capture","type":"exact"}],"termid":"GO:0062022"}


id: PBO:0086249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that mediates sphingolipid homeostasis; evolutionarily conserved, required for resistance to agents that induce unfolded protein response; Orm1p and Orm2p together control membrane biogenesis by coordinating lipid homeostasis with protein quality control; protein abundance increases in response to DNA replication stress; ORM2 has a paralog, ORM1, that arose from the whole genome duplication","termid":"PBO:0086249"}


id: GO:1990488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, in absence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:8561466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"anaerobic cellulose catabolic process","synonyms":[{"name":"anaerobic cellulose degradation","type":"exact"}],"termid":"GO:1990488"}


id: PBO:0083343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene CMP2/YML057W","termid":"PBO:0083343"}


id: MOD:00815
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00151. Remap to MOD:00151.","definition_xrefs":["PubMed:9428520","PubMed:14527393","PubMed:7878465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00815 molybdopterin (obsolete MOD:00815)","termid":"MOD:00815"}


id: GO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrotoluene metabolic process","synonyms":[{"name":"nitrotoluene metabolism","type":"exact"}],"termid":"GO:0019326"}


id: PBO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal binding protein 1","termid":"PBO:0044131"}


id: PBO:0088124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity; involved in control of cytosolic Ca2+ and K+ concentrations; has similarity to sodium/calcium exchangers, including the bovine Na+/Ca2+,K+ antiporter","termid":"PBO:0088124"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: GO:1904582
data:
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id: GO:0046394
data:
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id: PBO:0111876
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  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0111876"}


id: GO:0070771
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: GO:0032419
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: MOD:01039
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00036. Remap to MOD:00036.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01039 hydroxy aspartyl (obsolete MOD:01039)","termid":"MOD:01039"}


id: PBO:0030683
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_vegetative_cell","termid":"PBO:0030683"}


id: PBO:0079195
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 24, pseudogene","termid":"PBO:0079195"}


id: PR:Q09768
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11164:SF0","OMA:SCHPO00267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.10c","secondary_identifiers":["UniProtKB:Q09768"],"synonyms":[{"name":"GCS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLC","type":"exact"},{"name":"gamma-ECS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09768"}


id: PR:Q09721
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31A2.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31A2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.10","synonyms":[{"name":"Spom972h-SPAC31A2.10","type":"exact"}],"termid":"PR:Q09721"}


id: PBO:0047558
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 3","termid":"PBO:0047558"}


id: GO:0046556
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.","definition_xrefs":["GOC:mf","EC:3.2.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"alpha-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.55-RXN"],"synonyms":[{"name":"L-arabinosidase activity","type":"related"},{"name":"alpha-L-arabinanase activity","type":"related"},{"name":"alpha-L-arabinofuranoside arabinofuranohydrolase activity","type":"related"},{"name":"alpha-L-arabinofuranoside hydrolase activity","type":"related"},{"name":"alpha-L-arabinosidase activity","type":"related"},{"name":"alpha-N-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinosidase activity","type":"related"},{"name":"arabinofuranosidase activity","type":"related"},{"name":"arabinosidase activity","type":"related"},{"name":"polysaccharide alpha-L-arabinofuranosidase activity","type":"exact"}],"termid":"GO:0046556"}


id: GO:0010146
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-822"],"synonyms":[{"name":"fructan anabolism","type":"exact"},{"name":"fructan biosynthesis","type":"exact"},{"name":"fructan formation","type":"exact"},{"name":"fructan synthesis","type":"exact"},{"name":"levan biosynthesis","type":"exact"},{"name":"levan biosynthetic process","type":"exact"}],"termid":"GO:0010146"}


id: PATO:0000279
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male fertility","termid":"PATO:0000279"}


id: PBO:0062983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proton activated chloride channel 1","termid":"PBO:0062983"}


id: PBO:0039407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10 pseudogene 1","termid":"PBO:0039407"}


id: PBO:0078057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 47","termid":"PBO:0078057"}


id: PBO:0073204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3D","termid":"PBO:0073204"}


id: PR:O94289
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lub1 gene.","definition_xrefs":["UniProtKB:O94289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin homeostasis protein lub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.04c","synonyms":[{"name":"Spom972h-lub1","type":"exact"}],"termid":"PR:O94289"}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: GO:0044550
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  {"annotated_genes":["SJAG_04516","SJAG_04031","SJAG_00792","SJAG_04032","SJAG_00469","SJAG_02599","SJAG_00988","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90242,90250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[90207],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[89443,104563,93157,93512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[101514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0019290":null,"GO:0031169":null,"GO:0046938":null,"GO:1905569":null}}


id: PBO:0034168
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_between-species_paralogy_relationship_with","termid":"PBO:0034168"}


id: GO:1903555
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"regulation of TNF superfamily production","type":"related"},{"name":"regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903555"}


id: PR:O94359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C428.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.12c","synonyms":[{"name":"Spom972h-SPBC428.12c","type":"exact"}],"termid":"PR:O94359"}


id: PBO:0064961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 13","termid":"PBO:0064961"}


id: PBO:0086790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcribed during sporulation; null mutant exhibits increased resistance to rapamycin","termid":"PBO:0086790"}


id: GO:0098914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:tb","GOC:mtg_cardiac_conduct_nov11","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"}],"termid":"GO:0098914"}


id: GO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sodium ion (Na+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sodium ion binding","synonyms":[{"name":"Na+ ion binding","type":"exact"}],"termid":"GO:0031402"}


id: GO:0018302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018302"}


id: PBO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 4","termid":"PBO:0045164"}


id: PR:O74807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mhf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHF histone-fold complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.16","synonyms":[{"name":"Spom972h-mhf1","type":"exact"}],"termid":"PR:O74807"}


id: PBO:0073403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 6","termid":"PBO:0073403"}


id: PBO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb9","termid":"PBO:0002668"}


id: PR:P17610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.03","synonyms":[{"name":"RAB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt3","type":"exact"}],"termid":"PR:P17610"}


id: PBO:0054528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1928","termid":"PBO:0054528"}


id: GO:1900391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cAMP-mediated signaling.","definition_xrefs":["GOC:TermGenie","PMID:15448137","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900391)","synonyms":[{"name":"regulation of cAMP-mediated signalling by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900391"}


id: FYPO:0005389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rqh1 accumulates is greater than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:12023299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rqh1 foci during cellular response to ionizing radiation","synonyms":[{"name":"increased number of Rqh1 foci during cellular response to IR","type":"exact"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005389"}


id: PBO:0031029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_organization","termid":"PBO:0031029"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["EC:2.3.1.113","RHEA:17557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00989","MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: FYPO:0002965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleolus","synonyms":[{"name":"normal protein localisation to nucleolus","type":"exact"},{"name":"normal protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0002965"}


id: PBO:0048411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 1","termid":"PBO:0048411"}


id: GO:0042140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes during pachytene. Involved in the catalysis crossing over.","definition_xrefs":["GOC:jl","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination nodule assembly","termid":"GO:0007146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0065003","GO:0044085","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"late meiotic recombination nodule assembly","termid":"GO:0042140"}


id: GO:0018316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.","definition_xrefs":["RESID:AA0025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via L-cystine","termid":"GO:0018316"}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: GO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stabilization of the structure of beta-galactosidase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosidase stabilization activity (obsolete GO:0017030)","synonyms":[{"name":"beta-galactosidase stabilization activity","type":"exact"}],"termid":"GO:0017030"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: GO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland morphogenesis","termid":"GO:0060443"}


id: PBO:0062870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 6B","termid":"PBO:0062870"}


id: PBO:0070481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 16","termid":"PBO:0070481"}


id: PBO:0026736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026736"}


id: PR:O14359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.14 gene.","definition_xrefs":["UniProtKB:O14359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AIM2 family protein C30D10.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.14","synonyms":[{"name":"Spom972h-SPBC30D10.14","type":"exact"}],"termid":"PR:O14359"}


id: GO:0051260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein homooligomerization","synonyms":[{"name":"protein homooligomer assembly","type":"exact"},{"name":"protein homooligomer biosynthesis","type":"exact"},{"name":"protein homooligomer biosynthetic process","type":"exact"},{"name":"protein homooligomer formation","type":"exact"},{"name":"protein homooligomerization activity","type":"related"}],"termid":"GO:0051260"}


id: GO:1904818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000094","PMID:15840053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral peritoneum development","termid":"GO:1904818"}


id: PBO:0029176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029176"}


id: PBO:0064552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 14, pseudogene","termid":"PBO:0064552"}


id: FYPO:0003411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere inner repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere inner repeat","synonyms":[{"name":"decreased chromatin silencing at centromere imr","type":"exact"},{"name":"decreased chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"decreased heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"reduced chromatin silencing at centromere inner repeat","type":"exact"}],"termid":"FYPO:0003411"}


id: PR:Q9C121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.20","synonyms":[{"name":"Spom972h-SPAC1002.20","type":"exact"}],"termid":"PR:Q9C121"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:35536002","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1","termid":"PBO:0039689"}


id: PBO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle","termid":"PBO:0031487"}


id: GO:0044394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of a malonyl (CO-CH2-CO) group.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein malonylation","termid":"GO:0044394"}


id: PBO:0038883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 9","termid":"PBO:0038883"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: GO:0032736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"positively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-13 production","secondary_identifiers":["GO:2000667","GO:0045368"],"synonyms":[{"name":"activation of interleukin-13 production","type":"narrow"},{"name":"positive regulation of IL-13 production","type":"exact"},{"name":"positive regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-13 secretion","type":"narrow"},{"name":"stimulation of interleukin-13 production","type":"narrow"},{"name":"up regulation of interleukin-13 production","type":"exact"},{"name":"up-regulation of interleukin-13 production","type":"exact"},{"name":"upregulation of interleukin-13 production","type":"exact"}],"termid":"GO:0032736"}


id: PBO:0028679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin","termid":"PBO:0028679"}


id: PBO:0036039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction","termid":"PBO:0036039"}


id: PBO:0080664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10A","termid":"PBO:0080664"}


id: PATO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per liter of solution.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Osmolarity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osmolarity","termid":"PATO:0001655"}


id: GO:1901255
data:
  {"annotated_genes":["SJAG_02031","SJAG_02556","SJAG_03734","SJAG_02200","SJAG_02334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89132,89800,106165,107546,114832],"is_not":false,"summary":null,"term":"GO:1901255"}]},"cv_name":"biological_process","definition":"Any nucleotide-excision repair that is involved in interstrand cross-link repair.","definition_xrefs":["PMID:22064477","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"},{"relation_name":"part_of","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02031":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_03734":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair involved in interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NER involved in ICL repair","type":"exact"},{"name":"NER involved in interstrand cross-link repair","type":"exact"},{"name":"nucleotide-excision repair involved in ICL repair","type":"exact"}],"termid":"GO:1901255","terms_by_termid":{"GO:1901255":null}}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: GO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell acquires specialized features of a squamous basal epithelial stem cell of the prostate.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"squamous basal epithelial stem cell differentiation involved in prostate gland acinus development","termid":"GO:0060529"}


id: GO:0031355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid outer membrane (obsolete GO:0031355)","synonyms":[{"name":"integral to plastid outer membrane","type":"narrow"}],"termid":"GO:0031355"}


id: PBO:0047226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member B","termid":"PBO:0047226"}


id: GO:0120326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Penetration by a symbiont into a host organism via an appressorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22589729","GOC:krc","GOC:ach","PMID:14731267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium-mediated entry into host","synonyms":[{"name":"appressorium-mediated host invasion","type":"exact"},{"name":"appressorium-mediated host penetration","type":"exact"},{"name":"appressorium-mediated invasion into host","type":"exact"},{"name":"appressorium-mediated penetration into host","type":"exact"}],"termid":"GO:0120326"}


id: GO:1903318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein maturation.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"negatively_regulates","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of protein maturation","synonyms":[{"name":"down regulation of protein maturation","type":"exact"},{"name":"down-regulation of protein maturation","type":"exact"},{"name":"downregulation of protein maturation","type":"exact"},{"name":"inhibition of protein maturation","type":"narrow"}],"termid":"GO:1903318"}


id: PBO:0088356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase","termid":"PBO:0088356"}


id: GO:1902520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a doxorubicin stimulus.","definition_xrefs":["GOC:dw","GOC:TermGenie","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to doxorubicin","termid":"GO:1902520"}


id: GO:0045640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of basophil differentiation","termid":"GO:0045640"}


id: PBO:0003786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 (predicted)","termid":"PBO:0003786"}


id: GO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"myosin filament assembly","synonyms":[{"name":"myosin polymerization","type":"related"}],"termid":"GO:0031034"}


id: GO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across the plasma membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.","definition_xrefs":["ISBN:0716731363","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton motive force-driven ATP synthesis","termid":"GO:0015986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proton motive force-driven plasma membrane ATP synthesis","synonyms":[{"name":"ATP synthesis coupled proton transport","type":"broad"},{"name":"plasma membrane ATP synthesis coupled proton transport","type":"exact"}],"termid":"GO:0042777"}


id: PBO:0064720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 56","termid":"PBO:0064720"}


id: PBO:0088663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle protein Svp26","termid":"PBO:0088663"}


id: FYPO:0006356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, is abnormal.","definition_xrefs":["GO:0006338","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin remodeling","synonyms":[{"name":"abnormal chromatin modeling","type":"exact"},{"name":"abnormal chromatin remodelling","type":"exact"}],"termid":"FYPO:0006356"}


id: GO:1901789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzoyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"benzoyl-CoA metabolic process","termid":"GO:1901787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"benzoyl-CoA biosynthetic process","synonyms":[{"name":"benzoyl-CoA anabolism","type":"exact"},{"name":"benzoyl-CoA biosynthesis","type":"exact"},{"name":"benzoyl-CoA formation","type":"exact"},{"name":"benzoyl-CoA synthesis","type":"exact"}],"termid":"GO:1901789"}


id: PBO:0012602
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe frataxin homolog","termid":"PBO:0012602"}


id: GO:0106083
data:
  {"annotated_genes":["SJAG_04558","SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92852,108963,98937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[98945,92855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the nuclear membrane.","definition_xrefs":["GOC:lnp","PMID:28356353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear membrane protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106083","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: FYPO:0002151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable spore","secondary_identifiers":["FYPO:0000306"],"synonyms":[{"name":"abolished spore germination","type":"related"},{"name":"decreased spore viability","type":"related"},{"name":"lethal in spore","type":"exact"},{"name":"spore germination abolished","type":"related"}],"termid":"FYPO:0002151"}


id: PBO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 9 pseudogene","termid":"PBO:0050930"}


id: PR:O94682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis20 gene.","definition_xrefs":["UniProtKB:O94682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C776.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.16","synonyms":[{"name":"Spom972h-mis20","type":"exact"}],"termid":"PR:O94682"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: PATO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course.","definition_xrefs":["dictionary:reference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute","termid":"PATO:0000389"}


id: GO:0019765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity Fc receptor activity (obsolete GO:0019765)","synonyms":[{"name":"low affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019765"}


id: PBO:0027568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aseptate_mononucleate_vegetative_cell","termid":"PBO:0027568"}


id: GO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-10 production","secondary_identifiers":["GO:0045074","GO:2001179"],"synonyms":[{"name":"regulation of IL-10 production","type":"exact"},{"name":"regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032653"}


id: PBO:0067594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 756, pseudogene","termid":"PBO:0067594"}


id: PBO:0041133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 16","termid":"PBO:0041133"}


id: PBO:0005369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone N-acetyltransferase Naa40 (predicted)","termid":"PBO:0005369"}


id: GO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which catalyzes the conversion of methanophenazine and hydrogen to form dihydromethanophenazine. This typically consists of three polypeptides.","definition_xrefs":["GOC:mengo_curators","PMID:9555882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanophenazine reducing hydrogenase complex","termid":"GO:0044679"}


id: PR:P36602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","PMID:14648198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","termid":"PR:000036298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.05","secondary_identifiers":["UniProtKB:P36602","PR:000027719"],"synonyms":[{"name":"Spom972h-cdc22","type":"exact"}],"termid":"PR:P36602"}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: GO:0035319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a prehair in the approximately 10 hour period following its emergence from an epidermal cell in an imaginal disc-derived wing. Prehair elongation is guided and/or driven by the polymerization of actin filaments and the orderly crosslinking of filaments into bundles.","definition_xrefs":["GOC:mtg_sensu","PMID:11832234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair elongation","synonyms":[{"name":"wing hair elongation","type":"exact"},{"name":"wing prehair extension","type":"related"}],"termid":"GO:0035319"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: SO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant is a non exact copy of a sequence_feature or genome exhibiting one or more sequence_alteration.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000109 sequence_variant_obs (obsolete SO:0000109)","synonyms":[{"name":"mutation","type":"related"}],"termid":"SO:0000109"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: PBO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell","termid":"PBO:0030747"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: GO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phenylethanolamine = S-adenosyl-L-homocysteine + N-methylphenylethanolamine.","definition_xrefs":["EC:2.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase activity","secondary_identifiers":["RHEA:12176","MetaCyc:2.1.1.28-RXN","Reactome:R-HSA-209903"],"synonyms":[{"name":"S-adenosyl-L-methionine:phenylethanolamine N-methyltransferase activity","type":"related"},{"name":"noradrenalin N-methyltransferase activity","type":"related"},{"name":"noradrenaline N-methyltransferase activity","type":"related"},{"name":"norepinephrine N-methyltransferase activity","type":"related"},{"name":"norepinephrine methyltransferase activity","type":"related"},{"name":"phenethanolamine N-methyltransferase activity","type":"related"},{"name":"phenethanolamine methyltransferase activity","type":"related"}],"termid":"GO:0004603"}


id: PBO:0066115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member A","termid":"PBO:0066115"}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: GO:0014811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014811"}


id: PBO:0046667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial splicing regulatory protein 2","termid":"PBO:0046667"}


id: PBO:0055408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2838","termid":"PBO:0055408"}


id: PBO:0062815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 6","termid":"PBO:0062815"}


id: GO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the diaphragm are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ morphogenesis","termid":"GO:0048644"},{"relation_name":"part_of","term_name":"diaphragm development","termid":"GO:0060539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm morphogenesis","termid":"GO:0060540"}


id: GO:1903063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rl","GOC:BHF","PMID:23931754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"regulation of reverse cholesterol transport","termid":"GO:1903062"},{"relation_name":"negatively_regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of reverse cholesterol transport","synonyms":[{"name":"down regulation of reverse cholesterol transport","type":"exact"},{"name":"down-regulation of reverse cholesterol transport","type":"exact"},{"name":"downregulation of reverse cholesterol transport","type":"exact"},{"name":"inhibition of reverse cholesterol transport","type":"narrow"}],"termid":"GO:1903063"}


id: PBO:0056647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 8","termid":"PBO:0056647"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: GO:0019682
data:
  {"annotated_genes":["SJAG_00501","SJAG_04263","SJAG_03934","SJAG_00070","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[104557,109943,85122,92501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate metabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate metabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate metabolism","type":"exact"}],"termid":"GO:0019682","terms_by_termid":{"GO:0009052":null,"GO:0046166":null}}


id: PBO:0040773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEND7 divergent transcript","termid":"PBO:0040773"}


id: GO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptide with hormonal activity in animals.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptide hormone binding","synonyms":[{"name":"polypeptide hormone binding","type":"exact"}],"termid":"GO:0017046"}


id: GO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"response to dithiothreitol","termid":"GO:0072720"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dithiothreitol","synonyms":[{"name":"cellular response to 1,4-dithiothreitol","type":"exact"},{"name":"cellular response to DTT","type":"exact"}],"termid":"GO:0072721"}


id: GO:0052078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a PAMP signaling pathway in its host organism, initiated by a ligand binding of a pattern recognition receptor (PRR) to activate a plant innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18005697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway","secondary_identifiers":["GO:0052275"],"synonyms":[{"name":"disruption of host PAMP receptor signaling pathway","type":"exact"},{"name":"disruption of host pathogen-associated molecular pattern receptor signaling pathway","type":"exact"},{"name":"suppression of host pathogen-associated molecular pattern receptor signaling pathway","type":"narrow"}],"termid":"GO:0052078"}


id: PBO:0071897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 35","termid":"PBO:0071897"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: PBO:0080671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2","termid":"PBO:0080671"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: GO:1902103
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327","SJAG_01837","SJAG_01082","SJAG_01330","SJAG_04126","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94827],"is_not":false,"summary":null,"term":"GO:1902103"},{"annotations":[110614,102437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[102438,97923,112783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109916],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97457],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"is_a","term_name":"negative regulation of meiotic chromosome separation","termid":"GO:1905133"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"down-regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"downregulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"inhibition of meiotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of meiotic cell cycle","type":"narrow"},{"name":"negative regulation of meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:1902103","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0140859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + medicarpin = 4'-methoxyisoflavan-2',4,7-triol.","definition_xrefs":["RHEA:35811","PMID:7805842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"pterocarpan synthase activity","secondary_identifiers":["EC:4.2.1.139","RHEA:35407"],"synonyms":[{"name":"2',7-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"2'-hydroxyisoflavanol 4,2'-dehydratase activity","type":"exact"},{"name":"7,2'-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"medicarpan synthase activity","type":"exact"},{"name":"medicarpin synthase activity","type":"exact"}],"termid":"GO:0140859"}


id: PBO:0091911
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled-coil Protein","termid":"PBO:0091911"}


id: PBO:0062893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L divergent transcript","termid":"PBO:0062893"}


id: PBO:0047945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(q22.1)","termid":"PBO:0047945"}


id: PBO:0068169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 476","termid":"PBO:0068169"}


id: GO:0008397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + donor-H2 + O2 = 12-alpha-hydroxysteroid + H2O.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sterol 12-alpha-hydroxylase activity","secondary_identifiers":["EC:1.14.14.139"],"synonyms":[{"name":"cytochrome P450 CYP8B1","type":"narrow"}],"termid":"GO:0008397"}


id: PBO:0029861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029861"}


id: FYPO:0004520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a DNA-directed DNA polymerase activity is lower than normal. Processivity refers to the number of nucleotides incorporated into a nascent DNA strand per polymerase-DNA binding event.","definition_xrefs":["DOI:10.1038/npg.els.0001052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-directed DNA polymerase activity","termid":"FYPO:0004519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"decreased DNA-directed DNA polymerase processivity","synonyms":[{"name":"decreased DNA polymerase processivity","type":"broad"},{"name":"reduced DNA-directed DNA polymerase processivity","type":"exact"}],"termid":"FYPO:0004520"}


id: PBO:0088698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family plus-end directed microtubule motor Tea2","termid":"PBO:0088698"}


id: PBO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 21","termid":"PBO:0050947"}


id: PBO:0027586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion_at_centromere","termid":"PBO:0027586"}


id: GO:0009492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2Fe-2S electron transfer carrier (obsolete GO:0009492)","synonyms":[{"name":"2Fe-2S electron transfer carrier","type":"exact"}],"termid":"GO:0009492"}


id: PATO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000540 flooding sensitivity value (obsolete PATO:0000540)","termid":"PATO:0000540"}


id: PBO:0062958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 1","termid":"PBO:0062958"}


id: GO:0018674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + H+ + NADPH + O2 = (1S,6R)-isopiperitenol + H2O + NADP+.","definition_xrefs":["RHEA:15129","EC:1.14.14.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 3-monooxygenase activity","secondary_identifiers":["MetaCyc:--LIMONENE-3-MONOOXYGENASE-RXN","KEGG_REACTION:R02469","UM-BBD_reactionID:r0739"],"synonyms":[{"name":"(-)-limonene 3-hydroxylase activity","type":"related"},{"name":"(-)-limonene 3-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"limonene 3-hydroxylase activity","type":"exact"}],"termid":"GO:0018674"}


id: GO:0031829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 4 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 4 receptor binding","type":"exact"},{"name":"type 4 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031829"}


id: PBO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2b","termid":"PBO:0051893"}


id: PBO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD52 molecule","termid":"PBO:0042329"}


id: PBO:0070015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1312, pseudogene","termid":"PBO:0070015"}


id: PR:P79060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein translation factor sui1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.05","secondary_identifiers":["UniProtKB:P79060"],"synonyms":[{"name":"Spom972h-EIF1","type":"exact"}],"termid":"PR:P79060"}


id: GO:0006427
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104500],"is_not":false,"summary":null,"term":"GO:0006427"}]},"cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. The histidyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3''-OH group of a histidine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"histidyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006427","terms_by_termid":{"GO:0006427":null}}


id: GO:1904583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["GOC:TermGenie","PMID:20805360","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to polyamine macromolecule","synonyms":[{"name":"response to polyamine","type":"exact"},{"name":"response to polyamines","type":"exact"}],"termid":"GO:1904583"}


id: PATO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"characterised by an unidentifiable pattern.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random pattern","termid":"PATO:0002401"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: PBO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: GO:2000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xyloglucan metabolic process","synonyms":[{"name":"regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000948"}


id: PBO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide binding oligomerization domain containing 2","termid":"PBO:0061207"}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: PBO:0069681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 958, pseudogene","termid":"PBO:0069681"}


id: FYPO:0008075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is increased.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0008075"}


id: PBO:0090822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RAP1 ortholog, GTPase exchange factor, Zfs1 target number 1","termid":"PBO:0090822"}


id: GO:0016135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin biosynthetic process","synonyms":[{"name":"saponin anabolism","type":"exact"},{"name":"saponin biosynthesis","type":"exact"},{"name":"saponin formation","type":"exact"},{"name":"saponin synthesis","type":"exact"}],"termid":"GO:0016135"}


id: GO:1904871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:nc","PMID:25467444","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"is_a","term_name":"regulation of protein localization to Cajal body","termid":"GO:1904869"},{"relation_name":"positively_regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to Cajal body","synonyms":[{"name":"activation of protein localisation in Cajal body","type":"narrow"},{"name":"activation of protein localisation to Cajal body","type":"narrow"},{"name":"activation of protein localization in Cajal body","type":"narrow"},{"name":"activation of protein localization to Cajal body","type":"narrow"},{"name":"positive regulation of protein localisation in Cajal body","type":"exact"},{"name":"positive regulation of protein localisation to Cajal body","type":"exact"},{"name":"positive regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localisation in Cajal body","type":"exact"},{"name":"up regulation of protein localisation to Cajal body","type":"exact"},{"name":"up regulation of protein localization in Cajal body","type":"exact"},{"name":"up regulation of protein localization to Cajal body","type":"exact"},{"name":"up-regulation of protein localisation in Cajal body","type":"exact"},{"name":"up-regulation of protein localisation to Cajal body","type":"exact"},{"name":"up-regulation of protein localization in Cajal body","type":"exact"},{"name":"up-regulation of protein localization to Cajal body","type":"exact"},{"name":"upregulation of protein localisation in Cajal body","type":"exact"},{"name":"upregulation of protein localisation to Cajal body","type":"exact"},{"name":"upregulation of protein localization in Cajal body","type":"exact"},{"name":"upregulation of protein localization to Cajal body","type":"exact"}],"termid":"GO:1904871"}


id: GO:0010979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010979"}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0054418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1814","termid":"PBO:0054418"}


id: GO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NADP+ = 3-methylbutanal + NADPH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["KEGG_REACTION:R05686","EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"},{"relation_name":"is_a","term_name":"3-methylbutanal reductase [NAD(P)H] activity","termid":"GO:0046568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methylbutanal reductase (NADPH) activity","secondary_identifiers":["RHEA:18525"],"synonyms":[{"name":"3-methylbutanal reductase (NADP) activity","type":"exact"},{"name":"3-methylbutanol:NADP oxidoreductase activity","type":"exact"},{"name":"3-methylbutanol:NADP+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NADP) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NADP) activity","type":"exact"}],"termid":"GO:0052675"}


id: PBO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-15","termid":"PBO:0051362"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: PBO:0075888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1","termid":"PBO:0075888"}


id: PBO:0070409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 3","termid":"PBO:0070409"}


id: PBO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036041"}


id: MOD:00876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosamine sugar group through a glycosidic bond.","definition_xrefs":["Unimod:454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"hexosaminylated residue","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"},{"name":"Hexosamines (GalN, GlcN)","type":"exact"}],"termid":"MOD:00876"}


id: PBO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_multiseptate_cell","termid":"PBO:0036046"}


id: PBO:0035999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Cutin-1","termid":"PBO:0035999"}


id: GO:0098723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myofibril of a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"skeletal muscle myofibril","termid":"GO:0098723"}


id: GO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric nephron over time, from its formation to the mature structure. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["XAO:00002785","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron development","termid":"GO:0039019"}


id: PBO:0052144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 antisense RNA 1","termid":"PBO:0052144"}


id: PBO:0081160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein","termid":"PBO:0081160"}


id: GO:0000162
data:
  {"annotated_genes":["SJAG_01346","SJAG_05007","SJAG_01455","SJAG_02505","SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87718,93182,99629,100509,110773],"is_not":false,"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.","definition_xrefs":["GOC:mah","ISBN:0471331309","MetaCyc:TRPSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"indolalkylamine biosynthetic process","termid":"GO:0046219"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01346":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tryptophan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009096"],"synonyms":[{"name":"aromatic amino acid family biosynthetic process, anthranilate pathway","type":"exact"},{"name":"tryptophan anabolism","type":"exact"},{"name":"tryptophan biosynthesis","type":"exact"},{"name":"tryptophan formation","type":"exact"},{"name":"tryptophan synthesis","type":"exact"}],"termid":"GO:0000162","terms_by_termid":{"GO:0000162":null}}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: GO:1990474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool of vesicles that are the first to be released as a result of chemical or electrical stimulation e.g. by an action potential, have the highest presynaptic membrane fusion probability and correspond to about 1% of the total number of synaptic vesicles at a resting terminal bouton.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle, readily releasable pool","synonyms":[{"name":"RRP","type":"related"},{"name":"readily releasable pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990474"}


id: GO:0033337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin development","termid":"GO:0033337"}


id: GO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with acetylcholine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"},{"relation_name":"is_a","term_name":"acetylcholine receptor activity","termid":"GO:0015464"},{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor activity","secondary_identifiers":["GO:0004981"],"synonyms":[{"name":"G protein coupled acetylcholine receptor activity","type":"exact"},{"name":"G-protein coupled acetylcholine receptor activity","type":"exact"},{"name":"acetylcholine receptor activity, G-protein coupled","type":"exact"},{"name":"metabotropic acetylcholine receptor activity","type":"exact"},{"name":"muscarinic acetylcholine receptor activity","type":"exact"}],"termid":"GO:0016907"}


id: GO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that is synthesized only under certain specific growth conditions and receives electrons from the oxidation of specific substrates, e.g. trimethylamine, carnitine and in nitrogen fixation.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group II (obsolete GO:0015041)","synonyms":[{"name":"electron transfer flavoprotein, group II","type":"exact"}],"termid":"GO:0015041"}


id: GO:0051231
data:
  {"annotated_genes":["SJAG_00082","SJAG_04464","SJAG_01224","SJAG_01297","SJAG_00930","SJAG_01613","SJAG_02624","SJAG_02336","SJAG_03540","SJAG_03048","SJAG_04597","SJAG_02761","SJAG_00773","SJAG_01215","SJAG_04841","SJAG_00244","SJAG_03073","SJAG_00794","SJAG_04745","SJAG_04003","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90904,74699,91447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[97553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051232"},{"annotations":[97557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903562"},{"annotations":[114737,103556,104392,100030,97560,114217,95355,99676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000022"},{"annotations":[99677,96512,90907],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[90908,97561,96513,94761,104393,93430,100031,95974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[93431,95357,90909,97563,104986],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[98501],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902845"},{"annotations":[90549,86173],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902846"},{"annotations":[107146],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032888"},{"annotations":[111164],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the spindle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"spindle elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051231","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0032888":null,"GO:0051232":null,"GO:0051256":null,"GO:0061804":null,"GO:0061805":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null,"GO:1903562":null}}


id: FYPO:0001367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis is normal (i.e. indistinguishable from wild type). Cytokinesis is part of the cell cycle and results in the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["PomBase:mah","GO:0000281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cytokinesis","synonyms":[{"name":"normal cell cycle cytokinesis","type":"exact"},{"name":"normal cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cytokinesis during vegetative growth","type":"exact"},{"name":"normal mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0001367"}


id: MOD:00984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00984"}


id: PBO:0085864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has sequence and structural similarity to flavodoxins; predicted to be palmitoylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085864"}


id: PBO:0085567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein essential for meiotic DNA replication and sporulation; cytoplasmic protein; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation; also interacts with Orc2p, which is a component of the origin recognition complex","termid":"PBO:0085567"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: PBO:0045351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON pseudogene 1","termid":"PBO:0045351"}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: GO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous inhibitory synaptic inputs in a neural circuit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic synaptic transmission","termid":"GO:0060024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhythmic inhibition","termid":"GO:0043180"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: GO:0098917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from post to pre-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling","termid":"GO:0098917"}


id: PBO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 84","termid":"PBO:0071243"}


id: PBO:0061377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 37","termid":"PBO:0061377"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: GO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + (R)-citramalate = succinate + (R)-citramalyl-CoA.","definition_xrefs":["PMID:17259315","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"succinyl-CoA:(R)-citramalate CoA-transferase activity","secondary_identifiers":["EC:2.8.3.20","MetaCyc:RXN-8966","RHEA:38279"],"synonyms":[{"name":"L-carnitine dehydratase/bile acid-inducible protein F","type":"related"},{"name":"succinyl-CoA:(R)-citramalate CoA transferase activity","type":"exact"},{"name":"succinyl-CoA:R-citramalate CoA transferase","type":"exact"}],"termid":"GO:0043961"}


id: PBO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 25","termid":"PBO:0071419"}


id: PBO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Neuromyotonia","termid":"PBO:0018191"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: PBO:0082835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis","termid":"PBO:0082835"}


id: PBO:0048189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 1","termid":"PBO:0048189"}


id: PBO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 14","termid":"PBO:0072197"}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: FYPO:0003429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, and shorter, cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"},{"relation_name":"is_a","term_name":"short interphase microtubules","termid":"FYPO:0006103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"short interphase microtubules present in decreased numbers","synonyms":[{"name":"short cytoplasmic microtubules present in decreased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules present in decreased numbers during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules present in decreased numbers","type":"exact"},{"name":"short interphase microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"short interphase microtubules present in reduced numbers","type":"exact"}],"termid":"FYPO:0003429"}


id: PBO:0044757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 41","termid":"PBO:0044757"}


id: PBO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein, predicted methyltransferase","termid":"PBO:0011465"}


id: PBO:0082631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Met18p that directs Fe-S cluster incorporation and maturation of a subset of proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human FAM96B","termid":"PBO:0082631"}


id: PBO:0083046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine synthase; catalyzes formation of deoxyhypusine, the first step in hypusine biosynthesis; triggers posttranslational hypusination of translation elongation factor eIF-5A and regulates its intracellular levels; tetrameric; human homolog DHPS allows growth of yeast haploid dys1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083046"}


id: FYPO:0006680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bisphenol A. Cells stop growing (and may die) at a concentration of bisphenol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to bisphenol A","synonyms":[{"name":"hypersensitive to bisphenol A","type":"exact"},{"name":"sensitive to BPA","type":"exact"},{"name":"sensitive to bisphenol A during mitotic cell cycle","type":"related"},{"name":"sensitive to bisphenol A during vegetative growth","type":"exact"}],"termid":"FYPO:0006680"}


id: PBO:0032750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene coordinates updated","termid":"PBO:0032750"}


id: PBO:0044437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 2","termid":"PBO:0044437"}


id: GO:0042455
data:
  {"annotated_genes":["SJAG_00044","SJAG_01859","SJAG_06634","SJAG_00694","SJAG_01070","SJAG_03096","SJAG_03881","SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[112949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[89678,89900,85948,111951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[108043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside anabolism","type":"exact"},{"name":"ribonucleoside biosynthesis","type":"exact"},{"name":"ribonucleoside formation","type":"exact"},{"name":"ribonucleoside synthesis","type":"exact"}],"termid":"GO:0042455","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null,"GO:0046132":null}}


id: GO:0014731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cytoskeleton composed of spectrin, protein 4.1 and ankyrin. Spectrin-associated cytoskeleton is associated with the plasma membrane.","definition_xrefs":["GOC:mtg_muscle","PMID:15970557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spectrin-associated cytoskeleton","termid":"GO:0014731"}


id: PBO:0013088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg1","termid":"PBO:0013088"}


id: PBO:0059648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 14","termid":"PBO:0059648"}


id: GO:0006894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of proteins from the Golgi to one of two types of secretory vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. Specialized secretory cells have a second secretory pathway in which soluble proteins and other substances are initially stored in secretory vesicles for later release.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to secretory vesicle transport (obsolete GO:0006894)","synonyms":[{"name":"Golgi to secretory vesicle transport","type":"exact"},{"name":"Golgi to secretory vesicle transport, vesicle-mediated","type":"exact"}],"termid":"GO:0006894"}


id: PBO:0005487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A alpha","termid":"PBO:0005487"}


id: PBO:0091626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase-like protein, implicated in cellular detoxification","termid":"PBO:0091626"}


id: PBO:0079478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXK tyrosine kinase","termid":"PBO:0079478"}


id: PBO:0062951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABIR family member 2","termid":"PBO:0062951"}


id: GO:0047590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-dehydro-2-deoxy-D-gluconate = ADP + 6-phospho-5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["MetaCyc:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN","EC:2.7.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-dehydro-2-deoxygluconokinase activity","secondary_identifiers":["RHEA:13497"],"synonyms":[{"name":"5-keto-2-deoxyglucono kinase (phosphorylating)","type":"related"},{"name":"5-keto-2-deoxygluconokinase activity","type":"related"},{"name":"ATP:5-dehydro-2-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"DKH kinase activity","type":"related"}],"termid":"GO:0047590"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: PBO:0063639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 5, pseudogene","termid":"PBO:0063639"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: PBO:0076772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 12","termid":"PBO:0076772"}


id: PBO:0083158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1","termid":"PBO:0083158"}


id: GO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon.","definition_xrefs":["GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatodendritic compartment","termid":"GO:0036477"}


id: PBO:0054255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1639","termid":"PBO:0054255"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_03916","SJAG_03042","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87418,108335,114158],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: GO:0017092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage, within the membrane-spanning helix, of the amino-terminal half (the intermediate form) of sterol regulatory element binding protein (SREBP). This activity releases the transcription factor domain of SREBP from the membrane, freeing it to enter the nucleus.","definition_xrefs":["GOC:bf","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein site 2 protease activity (obsolete GO:0017092)","synonyms":[{"name":"SREBP site 2 protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein site 2 protease activity","type":"exact"}],"termid":"GO:0017092"}


id: GO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing glutamate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle","type":"exact"}],"termid":"GO:0060199"}


id: PBO:0050804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 4","termid":"PBO:0050804"}


id: PBO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 1","termid":"PBO:0048501"}


id: GO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + beta-glucan(in) = ADP + phosphate + beta-glucan(out).","definition_xrefs":["RHEA:18453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type beta-glucan transporter activity","secondary_identifiers":["EC:7.5.2.3","MetaCyc:3.6.3.42-RXN"],"synonyms":[{"name":"ABC-type beta-glucan transporter","type":"related"},{"name":"ATP-dependent beta-glucan transporter activity","type":"related"},{"name":"ATPase-coupled beta-glucan transporter activity","type":"related"},{"name":"beta-glucan ABC transporter","type":"exact"},{"name":"beta-glucan-transporting ATPase activity","type":"related"}],"termid":"GO:0015441"}


id: PR:O94663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar-sorting protein SNF8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02784","PANTHER:PTHR12806:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein dot2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.05c","secondary_identifiers":["UniProtKB:O94663"],"synonyms":[{"name":"ELL-associated protein of 30 kDa homolog dot2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNF8","type":"exact"},{"name":"defective organization of telomere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94663"}


id: PBO:0064527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G","termid":"PBO:0064527"}


id: GO:0097174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["PMID:15901686","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097174"}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: GO:1904107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","GOC:kmv","PMID:25335890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to microvillus","termid":"GO:1904106"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microvillus membrane","synonyms":[{"name":"protein localisation in microvillus membrane","type":"exact"},{"name":"protein localisation to microvillus membrane","type":"exact"},{"name":"protein localization in microvillus membrane","type":"exact"}],"termid":"GO:1904107"}


id: PBO:0067351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 448, pseudogene","termid":"PBO:0067351"}


id: GO:0051393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats.","definition_xrefs":["PMID:11699871","PMID:10984498","PMID:15014165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actinin binding","termid":"GO:0042805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"alpha-actinin binding","secondary_identifiers":["GO:0051372"],"synonyms":[{"name":"alpha-actinin 1 binding","type":"narrow"},{"name":"alpha-actinin 4 binding","type":"narrow"},{"name":"nonmuscle alpha-actinin binding","type":"narrow"}],"termid":"GO:0051393"}


id: GO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to type II interferon","synonyms":[{"name":"positive regulation of response to gamma-interferon","type":"related"},{"name":"positive regulation of response to immune interferon","type":"exact"},{"name":"positive regulation of response to interferon-gamma","type":"exact"},{"name":"positive regulation of response to type II IFN","type":"broad"}],"termid":"GO:0060332"}


id: PBO:0029291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_meiosis","termid":"PBO:0029291"}


id: PBO:0075626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 3","termid":"PBO:0075626"}


id: GO:0141185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a UFM1 modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:38383785","PMID:32537488","PMID:38383789","PMID:36848233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0030674","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"UFM1-modified protein reader activity","synonyms":[{"name":"UFM1 modified protein reader activity","type":"exact"},{"name":"UFM1-dependent protein binding","type":"exact"}],"termid":"GO:0141185"}


id: PATO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's not being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unlocalised","termid":"PATO:0000635"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12172:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: PBO:0088829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP 5'-nucleotidase","termid":"PBO:0088829"}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: FYPO:0003397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rRNA precursor level","termid":"FYPO:0003601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased 35S rRNA precursor level","synonyms":[{"name":"decreased 35S rRNA precursor accumulation","type":"related"},{"name":"decreased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"decreased 35S rRNA precursor transcript level","type":"exact"},{"name":"decreased 35S rRNA primary transcript level","type":"exact"},{"name":"reduced 35S rRNA precursor level","type":"exact"}],"termid":"FYPO:0003397"}


id: GO:0022009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system vasculogenesis","termid":"GO:0022009"}


id: PBO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1","termid":"PBO:0061189"}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: PATO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality where light rays originating from a point on the object converge.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Focus_(optics)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus","termid":"PATO:0001516"}


id: GO:0048160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when a single layer of cuboidal follicle cells surrounds the oocyte. The oocyte nucleus is large.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary follicle stage","synonyms":[{"name":"mammalian oogenesis stage 3","type":"exact"}],"termid":"GO:0048160"}


id: GO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior induced by frustration and directed against an available target.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"irritable aggressive behavior","synonyms":[{"name":"irritable aggression","type":"exact"}],"termid":"GO:0002123"}


id: PBO:0073506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 1B","termid":"PBO:0073506"}


id: GO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).","definition_xrefs":["GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain morphogenesis","termid":"GO:0048854"}


id: GO:1905411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cohesin unloading","termid":"GO:1905339"},{"relation_name":"is_a","term_name":"regulation of mitotic cohesin unloading","termid":"GO:1905410"},{"relation_name":"positively_regulates","term_name":"mitotic cohesin unloading","termid":"GO:0061781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cohesin unloading","termid":"GO:1905411"}


id: PBO:0078799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 17-1","termid":"PBO:0078799"}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: GO:0004795
data:
  {"annotated_genes":["SJAG_00432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96963],"is_not":false,"summary":null,"term":"GO:0004795"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate.","definition_xrefs":["EC:4.2.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"threonine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THRESYN-RXN","RHEA:10840"],"synonyms":[{"name":"O-phospho-L-homoserine phospho-lyase (adding water)","type":"related"},{"name":"O-phospho-L-homoserine phospho-lyase (adding water; L-threonine-forming)","type":"related"},{"name":"threonine synthetase activity","type":"related"}],"termid":"GO:0004795","terms_by_termid":{"GO:0004795":null}}


id: PBO:0111929
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0111929"}


id: GO:1901203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix assembly","synonyms":[{"name":"activation of extracellular matrix assembly","type":"narrow"},{"name":"up regulation of extracellular matrix assembly","type":"exact"},{"name":"up-regulation of extracellular matrix assembly","type":"exact"},{"name":"upregulation of extracellular matrix assembly","type":"exact"}],"termid":"GO:1901203"}


id: PBO:0051297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-32 (pseudogene)","termid":"PBO:0051297"}


id: GO:0032196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites. For elements that are transcribed as the first step of transposition, the process starts with the transcription of the transposable element, its translation and maturation, and ending with integration into DNA. For elements that are cut out, the process starts with the excision of the donor DNA and integrated into another site.","definition_xrefs":["PMID:25893143","ISBN:1555812090","PMID:14682279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transposition","secondary_identifiers":["Wikipedia:Transposon"],"termid":"GO:0032196"}


id: FYPO:0000889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 trimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000889"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: PR:C6Y4B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.14 gene.","definition_xrefs":["UniProtKB:C6Y4B0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.14","synonyms":[{"name":"Spom972h-SPAC27E2.14","type":"exact"}],"termid":"PR:C6Y4B0"}


id: GO:0030026
data:
  {"annotated_genes":["SJAG_04975","SJAG_04111","SJAG_01007","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91465,96348,99927,113078],"is_not":false,"summary":null,"term":"GO:0030026"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of manganese ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"manganese ion homeostasis","termid":"GO:0055071"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_04111":null,"SJAG_04867":null,"SJAG_04975":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular manganese ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular manganese ion homeostasis","type":"exact"},{"name":"manganese homeostasis","type":"broad"}],"termid":"GO:0030026","terms_by_termid":{"GO:0030026":null}}


id: GO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}


id: GO:1902483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any pyroptotic process in a cytotoxic T cell.","definition_xrefs":["GOC:nhn","GOC:TermGenie","PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyroptosis","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell pyroptotic process","synonyms":[{"name":"cytotoxic T cell apoptosis","type":"related"},{"name":"cytotoxic T cell apoptotic process","type":"related"},{"name":"cytotoxic T lymphocyte apoptosis","type":"narrow"},{"name":"cytotoxic T lymphocyte apoptotic process","type":"related"},{"name":"cytotoxic T-cell apoptosis","type":"related"},{"name":"cytotoxic T-cell apoptotic process","type":"exact"},{"name":"cytotoxic T-lymphocyte apoptosis","type":"narrow"},{"name":"cytotoxic T-lymphocyte apoptotic process","type":"related"}],"termid":"GO:1902483"}


id: PBO:0065295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 2","termid":"PBO:0065295"}


id: FYPO:0004942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains galactose and mannose residues in a normal (i.e. indistinguishable from wild type) ratio. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:11015724","PMID:8782411","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal galactose:mannose ratio in glycoprotein glycan","synonyms":[{"name":"normal galactose:mannose ratio in glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0004942"}


id: GO:0075514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the endosome involved in uptake of a virus into a host cell. Occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents from the endosome into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome lysis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome lysis","type":"exact"}],"termid":"GO:0075514"}


id: CHEBI:61049
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tacrolimus (anhydrous)","termid":"CHEBI:61049"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: GO:0015794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transport","synonyms":[{"name":"glycerol-3-phosphate transport","type":"related"}],"termid":"GO:0015794"}


id: PBO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population","termid":"PBO:0030181"}


id: PBO:0060254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN proto-oncogene, bHLH transcription factor","termid":"PBO:0060254"}


id: PBO:0004469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRE9 family cell wall biosynthesis protein (predicted)","termid":"PBO:0004469"}


id: SO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The R segment of the long terminal repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_LTR_region","synonyms":[{"name":"R LTR region","type":"exact"},{"name":"R long terminal repeat region","type":"exact"}],"termid":"SO:0000423"}


id: PBO:0049957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 3","termid":"PBO:0049957"}


id: PBO:0046020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 1","termid":"PBO:0046020"}


id: GO:0140042
data:
  {"annotated_genes":["SJAG_03609","SJAG_04059","SJAG_01537","SJAG_01180","SJAG_02980","SJAG_03162","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84951,90786,92850,107118,108188,110307,114943],"is_not":false,"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts of a lipid droplet.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lipid droplet formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome formation","type":"exact"},{"name":"lipid body formation","type":"exact"},{"name":"lipid particle formation","type":"exact"}],"termid":"GO:0140042","terms_by_termid":{"GO:0140042":null}}


id: PBO:0084662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-hydroxyacyl-thioester dehydratase; involved in fatty acid biosynthesis, required for respiratory growth and for normal mitochondrial morphology","termid":"PBO:0084662"}


id: GO:2000285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of excitatory postsynaptic membrane potential.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of excitatory postsynaptic membrane potential (obsolete GO:2000285)","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of regulation of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:2000285"}


id: PATO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a male to female advances.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male receptivity","termid":"PATO:0001721"}


id: GO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by circulating epinephrine-norepinephrine","termid":"GO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating epinephrine","synonyms":[{"name":"increased force of heart contraction by circulating adrenaline","type":"related"},{"name":"increased force of heart contraction by epinephrine in the bloodstream","type":"exact"},{"name":"positive regulation of heart contraction by circulating adrenaline","type":"related"},{"name":"positive regulation of heart contraction by circulating epinephrine","type":"related"}],"termid":"GO:0003088"}


id: GO:0098711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iron ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8321236","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0098771","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"iron ion import across plasma membrane","secondary_identifiers":["GO:0098707","GO:0097460","GO:0097459"],"synonyms":[{"name":"ferrous ion import into cell","type":"related"},{"name":"ferrous iron import across plasma membrane","type":"related"},{"name":"ferrous iron import into cell","type":"related"},{"name":"iron import into cell","type":"related"},{"name":"iron ion import into cell","type":"exact"}],"termid":"GO:0098711"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: PBO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease positive effector (predicted)","termid":"PBO:0004102"}


id: GO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline catabolic process","synonyms":[{"name":"choline breakdown","type":"exact"},{"name":"choline catabolism","type":"exact"},{"name":"choline degradation","type":"exact"}],"termid":"GO:0042426"}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: GO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: haloacetate + H2O = glycolate + halide.","definition_xrefs":["EC:3.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"haloacetate dehalogenase activity","secondary_identifiers":["MetaCyc:HALOACETATE-DEHALOGENASE-RXN","UM-BBD_enzymeID:e0006","RHEA:11044"],"synonyms":[{"name":"haloacetate halidohydrolase activity","type":"related"},{"name":"monohaloacetate dehalogenase activity","type":"related"}],"termid":"GO:0018785"}


id: GO:0035310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum cell fate specification","termid":"GO:0035310"}


id: PBO:0028280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0028280"}


id: PBO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 RhoGEF Gef1","termid":"PBO:0015657"}


id: GO:0160031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endoplasmic reticulum membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["PMID:19825355","PMID:34617598","PMID:24373967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"endoplasmic reticulum membrane biogenesis","synonyms":[{"name":"ER membrane biogenesis","type":"exact"}],"termid":"GO:0160031"}


id: PBO:0024871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific multicopy membrane protein family 1","termid":"PBO:0024871"}


id: FYPO:0005281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains DNA broken into small fragments when the cell is exposed to ionizing radiation.","definition_xrefs":["PMID:1594599","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation (obsolete FYPO:0005281)","synonyms":[{"name":"elongated inviable cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated cell with fragmented DNA during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to gamma radiation","type":"narrow"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during cellular response to ionizing radiation","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005281"}


id: GO:0006722
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84918,65750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triterpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"triterpene metabolic process","type":"narrow"},{"name":"triterpene metabolism","type":"narrow"},{"name":"triterpenoid metabolism","type":"exact"}],"termid":"GO:0006722","terms_by_termid":{"GO:0016104":null}}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: PBO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 4","termid":"PBO:0045065"}


id: PBO:0012061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase predicted to be involved in tRNA threonylcarbamoyladenosine modification Pgp1","termid":"PBO:0012061"}


id: FYPO:0001080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased polysaccharide level during vegetative growth","synonyms":[{"name":"decreased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"decreased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"decreased polysaccharide level during mitotic cell cycle","type":"related"},{"name":"reduced polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001080"}


id: PBO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_methylamine_level","termid":"PBO:0030650"}


id: GO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction.","definition_xrefs":["PMID:20181750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of salicylic acid mediated signaling pathway","termid":"GO:2000031"},{"relation_name":"positively_regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"positive regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0080151"}


id: PBO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 52","termid":"PBO:0048341"}


id: PBO:0041290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1RL antisense RNA 1","termid":"PBO:0041290"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: GO:0009314
data:
  {"annotated_genes":["SJAG_04150","SJAG_02828","SJAG_02199","SJAG_02860","SJAG_04791","SJAG_03898","SJAG_01010","SJAG_00208","SJAG_00814","SJAG_02818","SJAG_04190","SJAG_00272","SJAG_02334","SJAG_05242","SJAG_00863","SJAG_04877","SJAG_05197","SJAG_01648","SJAG_00729","SJAG_02200","SJAG_02182","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100117],"is_not":false,"summary":null,"term":"GO:0009314"},{"annotations":[65388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[115540,115539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[101050,98956,91374,105245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[84208,91198,85747,107547,90108,106955,100358,103112,93267,108404,89801,91408,92160,102061,108955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["GOC:jl","Wikipedia:Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to radiation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"response to electromagnetic radiation stimulus","type":"exact"},{"name":"response to radiation stimulus","type":"exact"}],"termid":"GO:0009314","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0038447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine and arginine rich domain containing protein","termid":"PBO:0038447"}


id: PBO:0076532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 46","termid":"PBO:0076532"}


id: PBO:0046689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein dehydrogenase","termid":"PBO:0046689"}


id: PBO:0066506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX3 divergent transcript","termid":"PBO:0066506"}


id: PBO:0078609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 63","termid":"PBO:0078609"}


id: PBO:0049071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 88","termid":"PBO:0049071"}


id: GO:0140792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone tyrosine phosphate + H2O = histone tyrosine + phosphate.","definition_xrefs":["PMID:19234442","PMID:19351884"],"gene_count":0,"genotype_count":0,"name":"obsolete histone tyrosine phosphatase activity (obsolete GO:0140792)","termid":"GO:0140792"}


id: PBO:0043619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 8","termid":"PBO:0043619"}


