# terms

id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["RHEA:16009","EC:2.7.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["MetaCyc:FORMATE-KINASE-RXN","KEGG_REACTION:R00518"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:7730362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: RO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x does not overlaps the sequence of x if and only if there is no z such that x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does_not_overlap_sequence_of","termid":"RO:0002527"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: GO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine metabolic process","synonyms":[{"name":"N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006044"}


id: GO:1902353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter by pheromones that results in positive regulation of induction of conjugation with cellular fusion.","definition_xrefs":["PMID:23872066","GOC:rn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:1902353)","synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"GO:1902353"}


id: GO:0072245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular parietal epithelial cell. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}


id: PBO:0056665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 3","termid":"PBO:0056665"}


id: GO:0036267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells into a substrate.","definition_xrefs":["PMID:22276126","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive filamentous growth","synonyms":[{"name":"invasive growth","type":"exact"}],"termid":"GO:0036267"}


id: SO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Biological sequence region that can be assigned to a specific subsequence of a polypeptide.","definition_xrefs":["SO:ke","SO:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_region","secondary_identifiers":["BS:00124","BS:00331"],"synonyms":[{"name":"positional","type":"related"},{"name":"positional polypeptide feature","type":"related"},{"name":"region","type":"narrow"},{"name":"region or site annotation","type":"related"},{"name":"site","type":"narrow"}],"termid":"SO:0000839"}


id: GO:1902455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["PMID:22969033","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"negatively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stem cell population maintenance","synonyms":[{"name":"down regulation of maintenance of pluripotency","type":"related"},{"name":"down regulation of stem cell maintenance","type":"exact"},{"name":"down-regulation of maintenance of pluripotency","type":"related"},{"name":"down-regulation of stem cell maintenance","type":"exact"},{"name":"downregulation of maintenance of pluripotency","type":"related"},{"name":"downregulation of stem cell maintenance","type":"exact"},{"name":"inhibition of maintenance of pluripotency","type":"related"},{"name":"inhibition of stem cell maintenance","type":"narrow"},{"name":"negative regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:1902455"}


id: GO:1901878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:16432188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of calcium ion binding","termid":"GO:1901876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion binding","synonyms":[{"name":"activation of calcium ion binding","type":"narrow"},{"name":"activation of calcium ion storage activity","type":"related"},{"name":"positive regulation of calcium ion storage activity","type":"related"},{"name":"up regulation of calcium ion binding","type":"exact"},{"name":"up regulation of calcium ion storage activity","type":"related"},{"name":"up-regulation of calcium ion binding","type":"exact"},{"name":"up-regulation of calcium ion storage activity","type":"related"},{"name":"upregulation of calcium ion binding","type":"exact"},{"name":"upregulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901878"}


id: PBO:0085865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Pmp3p, which is involved in cation transport; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085865"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: MOD:01776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methylthiocarbonylaminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:20608637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylthiocarbonylaminoethylcysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-([2-([(methylsulfanyl)carbonyl]amino)ethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"L-cysteine N-(methylthiocarbonyl)aziridine adduct","type":"exact"},{"name":"MTCTK","type":"exact"},{"name":"N6-methylthiocarbonyl-4-thialysine","type":"exact"},{"name":"S-[2-([(methylthio)carbonyl]amino)ethyl]-L-cysteine","type":"exact"}],"termid":"MOD:01776"}


id: PATO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000534 p h sensitivity value (obsolete PATO:0000534)","termid":"PATO:0000534"}


id: GO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and associated proteins. Actin rod structures are found in diverse organisms, having been observed in spores of Dictyostelium discoideum, Drosophila melanogaster oocytes, as well as in numerous animal cells under stress conditions.","definition_xrefs":["PMID:22623727","GOC:kp","GOC:krc","PMID:11858703","PMID:24813767","PMID:27535426","PMID:19459188","PMID:7820870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin rod","termid":"GO:0031002"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: GO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","secondary_identifiers":["GO:0043026"],"synonyms":[{"name":"regulation of caspase activation","type":"narrow"},{"name":"regulation of caspase activity","type":"broad"}],"termid":"GO:0043281"}


id: GO:0098775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly of curli, extracellular fibers produced by enteric bacteria. This process occurs outside the cell, where it is coupled to secretion across the cell outer membrane via nucleation by elements of the transporter complex.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"curli assembly","termid":"GO:0098775"}


id: PBO:0073130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 2","termid":"PBO:0073130"}


id: GO:0034503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the rDNA repeats on a chromosome in the nucleolus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"part_of","term_name":"nucleolus organization","termid":"GO:0007000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolar rDNA repeats","synonyms":[{"name":"condensin localization to nucleolar rDNA repeats","type":"narrow"},{"name":"protein localisation to nucleolar rDNA repeats","type":"exact"}],"termid":"GO:0034503"}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: PBO:0078726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 2-1","termid":"PBO:0078726"}


id: PBO:0044919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 5","termid":"PBO:0044919"}


id: GO:0046496
data:
  {"annotated_genes":["SJAG_02853","SJAG_02618","SJAG_02009","SJAG_02107","SJAG_01359","SJAG_01500","SJAG_03091","SJAG_01310","SJAG_03852","SJAG_03946","SJAG_00957","SJAG_02154","SJAG_05314","SJAG_01824","SJAG_02148","SJAG_06622","SJAG_00027","SJAG_00461","SJAG_02191","SJAG_00409","SJAG_03669","SJAG_00633","SJAG_02889","SJAG_01539","SJAG_04152","SJAG_03786","SJAG_02462","SJAG_00501","SJAG_03660","SJAG_00070","SJAG_03373","SJAG_04048","SJAG_04263","SJAG_03934","SJAG_04693","SJAG_02297","SJAG_02696","SJAG_03903","SJAG_04334","SJAG_06621","SJAG_01582","SJAG_01566","SJAG_03298","SJAG_01012","SJAG_04192","SJAG_02796","SJAG_02945","SJAG_04495","SJAG_02135","SJAG_00839","SJAG_00685","SJAG_04362","SJAG_00605","SJAG_02369","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85482,99565,113701],"is_not":false,"summary":null,"term":"GO:0046496"},{"annotations":[101577,101575,94134,99515,91150,101941,101942,105060,105059,105063,105064,105528,105529,90660,105065,105532,101576,105061,105062,105526,100586,99774,105531,105530,112467,94405,105527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107703,94323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[86818,95467,109220,87227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[96185,113392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[88063,92594,93610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[85199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[92860,108982,102623,90123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[88064,93611,92595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[91247,98227,95897,91248,98226,96990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[72010,75050],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[85122,109943,92501,104557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[90665,111441,94324,107704,114517,93034,93124],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[85864],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75053],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00070":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00501":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01539":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02462":null,"SJAG_02618":null,"SJAG_02696":null,"SJAG_02796":null,"SJAG_02853":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03669":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04048":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide metabolism","type":"exact"}],"termid":"GO:0046496","terms_by_termid":{"GO:0006096":null,"GO:0006116":null,"GO:0006734":null,"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0009435":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0034356":null,"GO:0043456":null,"GO:0045820":null,"GO:0046496":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905857":null}}


id: GO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded plant organelle found in the developing endosperm, contains storage proteins.","definition_xrefs":["GOC:jl","PMID:7704047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endosperm protein body","termid":"GO:0042735"}


id: GO:1905389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:14656734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leukotriene B4","synonyms":[{"name":"response to LTB4","type":"exact"}],"termid":"GO:1905389"}


id: GO:0141028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host microtubule cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21692747","PMID:26220855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cytoskeleton","termid":"GO:0052039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host microtubule cytoskeleton","synonyms":[{"name":"disruption by symbiont of host microtubule cytoskeleton","type":"related"},{"name":"modification by symbiont of host microtubule cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host microtubule cytoskeleton","type":"exact"}],"termid":"GO:0141028"}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: PBO:0056706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotransferrin","termid":"PBO:0056706"}


id: PBO:0072203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 2","termid":"PBO:0072203"}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["ISBN:0471331309","GOC:mah","PMID:12957385","ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: SO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A functional variant that changes the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_level_variant","synonyms":[{"name":"translational product level variant","type":"exact"}],"termid":"SO:0001553"}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: GO:0032660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:mah","GOC:add","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-17 production","secondary_identifiers":["GO:1905076","GO:0045378"],"synonyms":[{"name":"regulation of CTLA-8 production","type":"exact"},{"name":"regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"regulation of IL-17 production","type":"exact"},{"name":"regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032660"}


id: FYPO:0002834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere","synonyms":[{"name":"decreased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"decreased heterochromatin silencing at centromere","type":"related"},{"name":"reduced chromatin silencing at centromere","type":"exact"}],"termid":"FYPO:0002834"}


id: PBO:0029151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_paraquat","termid":"PBO:0029151"}


id: FYPO:0008135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during G1/S ofinterphase.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0002821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization tomitotic spindle pole body during G1/S","termid":"FYPO:0008135"}


id: GO:0042073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins.","definition_xrefs":["Reactome:R-HSA-5620924.2","PMID:18180368","GOC:cilia","GOC:kmv","PMID:17981739","PMID:22869374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"part_of","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intraciliary transport","secondary_identifiers":["GO:0035734","Wikipedia:Intraflagellar_transport"],"synonyms":[{"name":"IFT","type":"related"},{"name":"intraflagellar transport","type":"exact"},{"name":"intraflagellar transport involved in cilium organization","type":"exact"},{"name":"intraflagellar transport involved in microtubule-based flagellum organisation","type":"exact"}],"termid":"GO:0042073"}


id: GO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bicarbonate ions (CHO3-).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bicarbonate binding","synonyms":[{"name":"CHO3- ion binding binding","type":"exact"},{"name":"hydrogencarbonate binding","type":"exact"}],"termid":"GO:0071890"}


id: PBO:0076403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 1 like","termid":"PBO:0076403"}


id: SO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion the sequence of which cannot be mapped to the reference genome.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"novel_sequence_insertion","synonyms":[{"name":"novel sequence insertion","type":"exact"}],"termid":"SO:0001838"}


id: PBO:0029898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nuclear_periphery","termid":"PBO:0029898"}


id: GO:0008679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NADP+ = 2-hydroxy-3-oxopropanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-3-oxopropionate reductase activity","secondary_identifiers":["MetaCyc:TSA-REDUCT-RXN"],"synonyms":[{"name":"(R)-glycerate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"tartronate semialdehyde reductase (NADPH) activity","type":"related"}],"termid":"GO:0008679"}


id: SO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene trap construct is a type of engineered plasmid which is designed to integrate into a genome and produce a fusion transcript between exons of the gene into which it inserts and a reporter element in the construct. Gene traps contain a splice acceptor, do not contain promoter elements for the reporter, and are mutagenic. Gene traps may be bicistronic with the second cassette containing a promoter driving an a selectable marker.","definition_xrefs":["ZFIN:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_trap_construct","synonyms":[{"name":"gene trap construct","type":"exact"}],"termid":"SO:0001477"}


id: PBO:0077157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC/LysM-associated domain containing 2","termid":"PBO:0077157"}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_03955","SJAG_02354","SJAG_00175","SJAG_02588"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91878,106537,105767,86748],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["PMID:14617809","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783","GO:0005789","GO:0032991"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: GO:0102324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-6-oxo-nona-2,4-dienoate + H2O = butyrate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz","EC:3.7.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-nona-2,4-dienoate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-13157"],"termid":"GO:0102324"}


id: GO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + acetyl-CoA = N(alpha)-acetyl-L-histidine + CoA + H+.","definition_xrefs":["RHEA:24596","EC:2.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histidine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01160","MetaCyc:HISTIDINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:L-histidine N-acetyltransferase activity","type":"related"},{"name":"acetylhistidine synthetase activity","type":"related"},{"name":"histidine acetyltransferase activity","type":"related"}],"termid":"GO:0047981"}


id: GO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an epithelium of the uterus over time from its initial formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oviduct epithelium development","termid":"GO:0035846"},{"relation_name":"part_of","term_name":"uterus development","termid":"GO:0060065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine epithelium development","synonyms":[{"name":"uterus epithelial development","type":"exact"}],"termid":"GO:0035847"}


id: GO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont phytoalexin production (obsolete GO:0052343)","synonyms":[{"name":"positive regulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052343"}


id: GO:0140462
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87493],"is_not":false,"summary":null,"term":"GO:0140462"}]},"cv_name":"biological_process","definition":"The organization of chromatin into heterochromatin at the pericentric region of a chromosome.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"pericentric heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140462","terms_by_termid":{"GO:0140462":null}}


id: PBO:0076440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF12 divergent transcript","termid":"PBO:0076440"}


id: PBO:0027111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_cell_wall_disassembly_at_cell_fusion_site","termid":"PBO:0027111"}


id: PBO:0089307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim17","termid":"PBO:0089307"}


id: GO:1902335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive chemotaxis that is involved in neuron migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:21658587"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis involved in neuron migration (obsolete GO:1902335)","synonyms":[{"name":"chemoattraction involved in neuron chemotaxis","type":"exact"},{"name":"chemoattraction involved in neuron guidance","type":"related"},{"name":"chemoattraction involved in neuron migration","type":"exact"},{"name":"chemoattraction involved in neuronal migration","type":"exact"},{"name":"positive chemotaxis involved in neuron chemotaxis","type":"exact"},{"name":"positive chemotaxis involved in neuron guidance","type":"related"},{"name":"positive chemotaxis involved in neuron migration","type":"exact"},{"name":"positive chemotaxis involved in neuronal migration","type":"exact"}],"termid":"GO:1902335"}


id: PBO:0088081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-like protein; Ub-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion during autophagosome formation; membrane anchored Atg8p-PE is involved in phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles","termid":"PBO:0088081"}


id: PR:O74762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03658","PRO:DNx","PANTHER:PTHR10943:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.07c","secondary_identifiers":["UniProtKB:O74762"],"synonyms":[{"name":"Spom972h-PSMD1","type":"exact"}],"termid":"PR:O74762"}


id: PR:O13792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.14c","secondary_identifiers":["UniProtKB:O13792"],"synonyms":[{"name":"Spom972h-DDX39B","type":"exact"}],"termid":"PR:O13792"}


id: PBO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.58","termid":"PBO:0002130"}


id: PBO:0059622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 3","termid":"PBO:0059622"}


id: PBO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 3","termid":"PBO:0048814"}


id: GO:0032687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"negatively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interferon-alpha production","secondary_identifiers":["GO:1902740","GO:0045355"],"synonyms":[{"name":"down regulation of interferon-alpha production","type":"exact"},{"name":"down-regulation of interferon-alpha production","type":"exact"},{"name":"downregulation of interferon-alpha production","type":"exact"},{"name":"inhibition of interferon-alpha production","type":"narrow"},{"name":"negative regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032687"}


id: GO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of the gene products having some covalently attached portion, for example part of a peptide sequence or some other covalently attached group such as a GPI anchor, which spans or is embedded in one or both leaflets of the membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of membrane (obsolete GO:0031224)","synonyms":[{"name":"intrinsic to membrane","type":"narrow"}],"termid":"GO:0031224"}


id: FYPO:0003325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methotrexate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to methotrexate","synonyms":[{"name":"resistance to methotrexate during mitotic cell cycle","type":"related"},{"name":"resistance to methotrexate during vegetative growth","type":"exact"},{"name":"resistant to methotrexate","type":"exact"}],"termid":"FYPO:0003325"}


id: SO:1000064
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An umbrella term for terms describing an effect of a sequence variation on the frame of translation.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000064 sequence_variation_affecting_reading_frame (obsolete SO:1000064)","synonyms":[{"name":"mutation affecting reading frame","type":"exact"},{"name":"sequence variation affecting reading frame","type":"related"}],"termid":"SO:1000064"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: GO:0007364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of terminal gap gene expression mediated largely by the effects of other gap genes.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of terminal gap gene boundary (obsolete GO:0007364)","termid":"GO:0007364"}


id: PR:Q9USM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.09c","synonyms":[{"name":"Spom972h-tim23","type":"exact"}],"termid":"PR:Q9USM7"}


id: GO:0021643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the vagus nerve to attain its fully functional state. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"vagus nerve development","termid":"GO:0021564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve maturation","synonyms":[{"name":"CN X maturation","type":"related"}],"termid":"GO:0021643"}


id: PR:O14177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 2a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10476:SF4","PRO:DNx","OMA:SCHPO01120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III complex subunit did4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.01","secondary_identifiers":["UniProtKB:O14177"],"synonyms":[{"name":"Spom972h-CHMP2A","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14177"}


id: GO:2000538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"positively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell chemotaxis","termid":"GO:2000538"}


id: FYPO:0007284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the non-growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to non-growing cell tip","synonyms":[{"name":"normal protein localisation to non-growing cell tip","type":"exact"},{"name":"normal protein localization to non-growing cell end","type":"exact"},{"name":"normal protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to non-growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0007284"}


id: PBO:0063621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, muscle","termid":"PBO:0063621"}


id: PBO:0077338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 74B","termid":"PBO:0077338"}


id: GO:1990348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of adenine misinserted into nascent strand opposite guanine in the template by adenine DNA glycosylase activity. The reaction leaves an apurinic AP site. I also requested same term but for Go/A mismatch. If you think it is better to make one term for mismatched adenine that is fine by me.","definition_xrefs":["PMID:9737967"],"gene_count":0,"genotype_count":0,"name":"obsolete G/A mismatch specific adenine DNA glycosylase activity (obsolete GO:1990348)","synonyms":[{"name":"G/A mismatch specific adenine DNA glycosylase activity","type":"exact"}],"termid":"GO:1990348"}


id: PBO:0089592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-aminobenzoate synthase","termid":"PBO:0089592"}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:rl","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: PBO:0004387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter Caf5","termid":"PBO:0004387"}


id: MOD:01217
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12872131","Unimod:285#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), light C12","termid":"MOD:00605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12 - site D","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:01217"}


id: PBO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, HOPS complex subunit Vam6 (predicted)","termid":"PBO:0001048"}


id: GO:0010849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of ATP hydrolysis by an ATPase. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of proton-transporting ATPase activity, rotational mechanism","synonyms":[{"name":"regulation of V-type ATPase activity","type":"broad"},{"name":"regulation of hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"}],"termid":"GO:0010849"}


id: MOD:01555
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01555"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: GO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XV) chains; a chondroitin sulfate proteoglycan often found in specialized basement membranes where it bridges between fibrils.","definition_xrefs":["PMID:21421911","PMID:11937714","PMID:11158616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XV trimer","termid":"GO:0005582"}


id: PBO:0030067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_gluconate_carbon_source","termid":"PBO:0030067"}


id: PR:A6X977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.13 gene.","definition_xrefs":["UniProtKB:A6X977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.13","synonyms":[{"name":"Spom972h-SPAC27E2.13","type":"exact"}],"termid":"PR:A6X977"}


id: GO:0120192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"tight junction organization","termid":"GO:0120193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"tight junction assembly","synonyms":[{"name":"occluding cell junction assembly","type":"exact"},{"name":"occluding junction assembly","type":"exact"}],"termid":"GO:0120192"}


id: GO:0004742
data:
  {"annotated_genes":["SJAG_02158","SJAG_00866"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110360,114531],"is_not":false,"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N6-(S8-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA.","definition_xrefs":["RHEA:17017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030523","EC:2.3.1.12"],"synonyms":[{"name":"acetyl-CoA: enzyme-6-N-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA: enzyme-N6-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:dihydrolipoamide S-acetyltransferase activity","type":"related"},{"name":"dihydrolipoamide S-acetyltransferase activity","type":"exact"},{"name":"dihydrolipoamide S-acyltransferase activity","type":"related"},{"name":"dihydrolipoate acetyltransferase activity","type":"related"},{"name":"dihydrolipoic transacetylase activity","type":"related"},{"name":"dihydrolipoyl acetyltransferase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:acetyl-CoA S-acetyltransferase activity","type":"related"},{"name":"lipoate acetyltransferase activity","type":"related"},{"name":"lipoate transacetylase activity","type":"related"},{"name":"lipoic acetyltransferase activity","type":"related"},{"name":"lipoic acid acetyltransferase activity","type":"related"},{"name":"lipoic transacetylase activity","type":"related"},{"name":"lipoylacetyltransferase activity","type":"related"},{"name":"thioltransacetylase A activity","type":"narrow"},{"name":"transacetylase X activity","type":"narrow"}],"termid":"GO:0004742","terms_by_termid":{"GO:0004742":null}}


id: PBO:0031486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_meiotic_spindle","termid":"PBO:0031486"}


id: PBO:0004827
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to be coding","termid":"PBO:0004827"}


id: PBO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor 1 (predicted)","termid":"PBO:0001147"}


id: PBO:0069439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 704, pseudogene","termid":"PBO:0069439"}


id: FYPO:0001164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on glucose carbon source","synonyms":[{"name":"normal cell population growth on glucose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on dextrose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glucose carbon source","type":"exact"}],"termid":"FYPO:0001164"}


id: PATO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having leaflets or leaflets-like structures on each side of a common axis.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinnate","synonyms":[{"name":"feather-like","type":"related"},{"name":"of a leaf shape","type":"related"}],"termid":"PATO:0000410"}


id: GO:0035566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a metanephric kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney size","termid":"GO:0035564"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephros size","synonyms":[{"name":"regulation of metanephric kidney size","type":"exact"}],"termid":"GO:0035566"}


id: GO:0002547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinin cascade","termid":"GO:0002258"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"positively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"activation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"positive regulation of glandular kallikrein-kinin cascade","type":"exact"},{"name":"stimulation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"up regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"up-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"upregulation of tissue kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002547"}


id: FYPO:0000293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any DNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"DNA metabolism phenotype","synonyms":[{"name":"fission yeast DNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000293"}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: PBO:0088727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog","termid":"PBO:0088727"}


id: PBO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 4","termid":"PBO:0003013"}


id: PBO:0111750
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0111750"}


id: GO:0120319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl long-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an (omega-1)-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase.","definition_xrefs":["GOC:nhn","PMID:18577768","PMID:24242247","PMID:22772592","RHEA:60936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"long-chain fatty acid omega-1 hydroxylase activity","synonyms":[{"name":"cytochrome P450 fatty acid omega-1 hydroxylase activity","type":"related"}],"termid":"GO:0120319"}


id: PBO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 5, pseudogene","termid":"PBO:0061432"}


id: PBO:0004213
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by mRNA stability","termid":"PBO:0004213"}


id: PBO:0005464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (predicted)","termid":"PBO:0005464"}


id: PBO:0055412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2842","termid":"PBO:0055412"}


id: PR:Q9C111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC343.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C343.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.20","synonyms":[{"name":"Spom972h-SPAC343.20","type":"exact"}],"termid":"PR:Q9C111"}


id: GO:0045122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["ISBN:0815316194","PMID:15006741","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"aflatoxin biosynthetic process","synonyms":[{"name":"aflatoxin anabolism","type":"exact"},{"name":"aflatoxin biosynthesis","type":"exact"},{"name":"aflatoxin formation","type":"exact"},{"name":"aflatoxin synthesis","type":"exact"}],"termid":"GO:0045122"}


id: GO:0045611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"negatively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte differentiation","synonyms":[{"name":"down regulation of hemocyte differentiation","type":"exact"},{"name":"down-regulation of hemocyte differentiation","type":"exact"},{"name":"downregulation of hemocyte differentiation","type":"exact"},{"name":"inhibition of hemocyte differentiation","type":"narrow"},{"name":"negative regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045611"}


id: PBO:0053629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 674","termid":"PBO:0053629"}


id: GO:0008216
data:
  {"annotated_genes":["SJAG_04481","SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98882,109502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermidine metabolism","type":"exact"}],"termid":"GO:0008216","terms_by_termid":{"GO:0008295":null}}


id: GO:0009834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type secondary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall anabolism","type":"broad"},{"name":"secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall biosynthetic process","type":"broad"},{"name":"secondary cell wall formation","type":"broad"},{"name":"secondary cell wall synthesis","type":"broad"}],"termid":"GO:0009834"}


id: PBO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 75","termid":"PBO:0048364"}


id: PBO:0056440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 13","termid":"PBO:0056440"}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: PBO:0053613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 649","termid":"PBO:0053613"}


id: FYPO:0003029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome","synonyms":[{"name":"decreased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"decreased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"decreased splicing","type":"broad"},{"name":"reduced mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0003029"}


id: PR:O13923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crn1 gene.","definition_xrefs":["UniProtKB:O13923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin-like protein crn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.02","synonyms":[{"name":"Spom972h-crn1","type":"exact"}],"termid":"PR:O13923"}


id: CHEBI:26271
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline","termid":"CHEBI:26271"}


id: GO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["ISBN:0471331309","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"vitamin D binding","synonyms":[{"name":"calciferol binding","type":"narrow"},{"name":"cholecalciferol binding","type":"narrow"},{"name":"ergocalciferol binding","type":"narrow"}],"termid":"GO:0005499"}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: PBO:0044087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A7","termid":"PBO:0044087"}


id: GO:1901674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 acetylation (obsolete GO:1901674)","synonyms":[{"name":"regulation of histone H3 acetylation at K27","type":"exact"},{"name":"regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901674"}


id: GO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of prostaglandin-endoperoxide synthase activity","termid":"GO:0060584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"positive regulation of (PG)H synthase activity","type":"related"},{"name":"positive regulation of PG synthetase activity","type":"related"},{"name":"positive regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"positive regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060585"}


id: PBO:0047299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARP1 antisense RNA 1","termid":"PBO:0047299"}


id: PBO:0045207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C3","termid":"PBO:0045207"}


id: PBO:0057927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3652","termid":"PBO:0057927"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: GO:0106365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: all-trans-beta-carotene = 9-cis-beta-carotene.","definition_xrefs":["RHEA:34455","PMID:22422982","PMID:19470589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-carotene isomerase activity","secondary_identifiers":["EC:5.2.1.14"],"termid":"GO:0106365"}


id: PBO:0062915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 6 pseudogene","termid":"PBO:0062915"}


id: GO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage migration inhibitory factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage migration inhibitory factor production","synonyms":[{"name":"MIF production","type":"exact"}],"termid":"GO:0044807"}


id: PBO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga6 (predicted)","termid":"PBO:0036378"}


id: PBO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related protein 2","termid":"PBO:0042586"}


id: MOD:01390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue to form L-valine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7328054","RESID:AA0467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01390"}


id: PBO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12B","termid":"PBO:0051563"}


id: GO:0042144
data:
  {"annotated_genes":["SJAG_04909","SJAG_01080","SJAG_03442","SJAG_03072","SJAG_00380","SJAG_01072","SJAG_00330","SJAG_03915","SJAG_02384","SJAG_03137","SJAG_01299","SJAG_05194","SJAG_04966","SJAG_01319","SJAG_02433","SJAG_00029","SJAG_01598","SJAG_03386"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85284,87323,87444,96080,96376,96438,96876,97247,100762,102803,104410,105564,106402,110634,112939],"is_not":false,"summary":null,"term":"GO:0042144"},{"annotations":[97575],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[93761,106400],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[93531],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"}]},"cv_name":"biological_process","definition":"The fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01080":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null,"SJAG_03442":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042145"],"synonyms":[{"name":"homotypic vacuole fusion","type":"exact"},{"name":"homotypic vacuole fusion (non-autophagic)","type":"exact"},{"name":"homotypic vacuole fusion, non-autophagic","type":"exact"},{"name":"vacuole fusion (non-autophagic)","type":"exact"}],"termid":"GO:0042144","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null}}


id: PBO:0082021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator pseudogene 1","termid":"PBO:0082021"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: PBO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1 (predicted)","termid":"PBO:0001047"}


id: GO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to heat stress (obsolete GO:0061408)","termid":"GO:0061408"}


id: GO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylglycerol, through sequential deacylation and re-acylation reactions, to generate phosphatidylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15485873","PMID:18458083","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol acyl-chain remodeling","synonyms":[{"name":"phosphatidylglycerol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036148"}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: GO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune effector process","termid":"GO:0002252"}


id: GO:0072370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 121 of the histone.","definition_xrefs":["PMID:19965387","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S121 phosphorylation (obsolete GO:0072370)","synonyms":[{"name":"histone H2A phosphorylation at S121","type":"exact"},{"name":"histone H2AS121 phosphorylation","type":"exact"}],"termid":"GO:0072370"}


id: PBO:0070463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 6","termid":"PBO:0070463"}


id: GO:0080188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A small RNA-based gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci. Transposable elements are silenced by this mechanism.","definition_xrefs":["PMID:33031395","PMID:21420348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"gene silencing by siRNA-directed DNA methylation","synonyms":[{"name":"RNA-directed DNA methylation","type":"related"},{"name":"RdDM","type":"exact"},{"name":"gene silencing by RNA-directed DNA methylation","type":"related"}],"termid":"GO:0080188"}


id: PBO:0111925
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi","termid":"PBO:0111925"}


id: PBO:0051818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 3","termid":"PBO:0051818"}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: PATO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cup-shaped","termid":"PATO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupulate","termid":"PATO:0002342"}


id: SO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a transcript that has a translational frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_frameshifted","termid":"SO:0000887"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_transcript_with_translational_frameshift","synonyms":[{"name":"gene with transcript with translational frameshift","type":"exact"}],"termid":"SO:0000712"}


id: GO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of locomotion of a cell or organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of locomotion","synonyms":[{"name":"down regulation of locomotion","type":"exact"},{"name":"down-regulation of locomotion","type":"exact"},{"name":"downregulation of locomotion","type":"exact"},{"name":"inhibition of locomotion","type":"narrow"}],"termid":"GO:0040013"}


id: PATO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape with three supports or legs.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripodal","termid":"PATO:0002428"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["Wikipedia:Trans-activation_response_element_(TAR)","PMID:25116364","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0049499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 6","termid":"PBO:0049499"}


id: PBO:0074240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit beta","termid":"PBO:0074240"}


id: PBO:0063910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma","termid":"PBO:0063910"}


id: CHEBI:16414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine","termid":"CHEBI:16414"}


id: PBO:0077315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 2","termid":"PBO:0077315"}


id: PBO:0045408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 10","termid":"PBO:0045408"}


id: GO:0099502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulatory process by which increased cytosolic calcium levels lead to the the fusion of synaptic vesicles with the presynaptic active zone membrane by bringing primed synaptic vesicle membrane into contact with membrane presynaptic active zone membrane.","definition_xrefs":["PMID:23060190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031632"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}


id: PBO:0040864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 1","termid":"PBO:0040864"}


id: PBO:0080303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 67 pseudogene","termid":"PBO:0080303"}


id: GO:1902544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:15518571"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA N-glycosylase activity (obsolete GO:1902544)","synonyms":[{"name":"regulation of DNA glycosylase activity","type":"exact"},{"name":"regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902544"}


id: PR:O94365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.19c","secondary_identifiers":["UniProtKB:O94365"],"synonyms":[{"name":"Spom972h-UTP15","type":"exact"},{"name":"U3 protein 15 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94365"}


id: PBO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1 (predicted)","termid":"PBO:0011429"}


id: GO:0098592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the apical region of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of apical plasma membrane","termid":"GO:0098592"}


id: FYPO:0007477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the stable inheritance of heterochromatic structure is abnormal in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PomBase:mah","PMID:29899117","PMID:31278118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal epigenetic heterochromatin inheritance","synonyms":[{"name":"abnormal PEV","type":"related"},{"name":"abnormal epigenetic heterochromatin propagation","type":"exact"},{"name":"abnormal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007477"}


id: GO:0046910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of pectinesterase.","definition_xrefs":["GOC:ai","PMID:10880981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"pectinesterase inhibitor activity","termid":"GO:0046910"}


id: GO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.","definition_xrefs":["GOC:jl","PMID:12584108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide binding","termid":"GO:0042923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuromedin U binding","synonyms":[{"name":"NMU binding","type":"exact"}],"termid":"GO:0042924"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: PBO:0087628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery; required for maturation of cytosolic and nuclear FeS proteins and for normal resistance to oxidative stress; deficiency results in shortened lifespan and sensitivity to paraquat; homologous to human Narf","termid":"PBO:0087628"}


id: PATO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which is equal to the mass exerting an influence on a one-dimensional object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Linear_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear density","termid":"PATO:0001352"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PBO:0088040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C, but not a true functional homolog of this E2; unlike E2-C, not required for the degradation of mitotic cyclin Clb2","termid":"PBO:0088040"}


id: PBO:0052840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-5, pseudogene","termid":"PBO:0052840"}


id: PBO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 7","termid":"PBO:0060864"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: PBO:0038967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP homeobox 2","termid":"PBO:0038967"}


id: PBO:0111380
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific, implicated in rRNA processing","termid":"PBO:0111380"}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: PBO:0027603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization","termid":"PBO:0027603"}


id: PBO:0074301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1A-SULT1A3 readthrough (NMD candidate)","termid":"PBO:0074301"}


id: PBO:0034514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow_rim","termid":"PBO:0034514"}


id: PBO:0086721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; expressed at high levels during sporulation","termid":"PBO:0086721"}


id: GO:0140345
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90565,94071],"is_not":false,"summary":null,"term":"GO:0140345"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:11870854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"phosphatidylcholine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140345","terms_by_termid":{"GO:0140345":null}}


id: PBO:0088125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); likely mediates K+ and Cl- cotransport into the vacuole; has a role in potassium homeostasis and salt tolerance; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0088125"}


id: PBO:0004712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2 interacting protein Tti2, predicted ASTRA complex subunit","termid":"PBO:0004712"}


id: GO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a bundle of His cell to a Purkinje myocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in bundle of His cell-Purkinje myocyte electrical coupling","termid":"GO:0086078"}


id: GO:0044694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into a host cell by a pore formed by the symbiont in the host cell. Examples of this process include injection by a non-enveloped virus of the viral genome into the host cytoplasm, usually mediated by a viral pore-forming peptide associated with the viral capsid or bacteriophage tail.","definition_xrefs":["GOC:jl","VZ:979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome entry into host cell via pore formation in plasma membrane","synonyms":[{"name":"membrane puncture-mediated penetration of viral genome into host cell","type":"related"},{"name":"pore-mediated entry of viral genome into host cell","type":"narrow"},{"name":"pore-mediated penetration of viral genome into host cell","type":"related"},{"name":"viral entry via genome injection","type":"related"},{"name":"viral genome delivery via icosahedral vertex","type":"narrow"},{"name":"viral genome translocation","type":"exact"},{"name":"viral pore-forming protein","type":"narrow"}],"termid":"GO:0044694"}


id: PBO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rmp1/NEPRO","termid":"PBO:0090436"}


id: PBO:0070269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 3","termid":"PBO:0070269"}


id: PBO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroplastin","termid":"PBO:0061408"}


id: PBO:0004229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent tRNA methyltransferase (predicted)","termid":"PBO:0004229"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","secondary_identifiers":["MetaCyc:PWY-3801","MetaCyc:PWY-621"],"synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: PBO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_and_duration_of_protein-protein_interaction","termid":"PBO:0035737"}


id: GO:0009079
data:
  {"annotated_genes":["SJAG_06635","SJAG_04149","SJAG_04098","SJAG_03985","SJAG_03562","SJAG_02841","SJAG_03243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99425,106208,96950,86850,102304,106570,109382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any amino acid that requires pyruvate for its synthesis, e.g. alanine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate family amino acid anabolism","type":"exact"},{"name":"pyruvate family amino acid biosynthesis","type":"exact"},{"name":"pyruvate family amino acid formation","type":"exact"},{"name":"pyruvate family amino acid synthesis","type":"exact"}],"termid":"GO:0009079","terms_by_termid":{"GO:0009098":null}}


id: PBO:0079761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UEV and lactate/malate dehyrogenase domains","termid":"PBO:0079761"}


id: PR:O94373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp4 gene.","definition_xrefs":["UniProtKB:O94373","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.07","synonyms":[{"name":"Spom972h-atp4","type":"exact"}],"termid":"PR:O94373"}


id: GO:0019904
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein domain specific binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904","terms_by_termid":{"GO:0033149":null}}


id: GO:0035659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of a target cell in the epidermis that contributes to the migration of an epidermal cell along or through a wound gap to reestablish a continuous epidermis.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in wound healing, spreading of epidermal cells (obsolete GO:0035659)","synonyms":[{"name":"Wnt receptor signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt receptor signalling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt-activated signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:0035659"}


id: PBO:0042432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 1","termid":"PBO:0042432"}


id: GO:1905141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18359901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of apical ectodermal ridge formation","termid":"GO:1905140"},{"relation_name":"negatively_regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apical ectodermal ridge formation","synonyms":[{"name":"down regulation of AER formation","type":"related"},{"name":"down regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down regulation of apical epidermal ridge formation","type":"exact"},{"name":"down regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"down-regulation of AER formation","type":"related"},{"name":"down-regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down-regulation of apical epidermal ridge formation","type":"exact"},{"name":"down-regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"downregulation of AER formation","type":"related"},{"name":"downregulation of apical ectodermal ridge formation","type":"exact"},{"name":"downregulation of apical epidermal ridge formation","type":"exact"},{"name":"downregulation of crista ectodermalis apicalis formation","type":"related"},{"name":"inhibition of AER formation","type":"related"},{"name":"inhibition of apical ectodermal ridge formation","type":"narrow"},{"name":"inhibition of apical epidermal ridge formation","type":"narrow"},{"name":"inhibition of crista ectodermalis apicalis formation","type":"related"},{"name":"negative regulation of AER formation","type":"related"},{"name":"negative regulation of apical epidermal ridge formation","type":"exact"},{"name":"negative regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905141"}


id: PBO:0063236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 1","termid":"PBO:0063236"}


id: PBO:0039546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD42 divergent transcript","termid":"PBO:0039546"}


id: GO:0050334
data:
  {"annotated_genes":["SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57036],"is_not":false,"summary":null,"term":"GO:0050334"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H+.","definition_xrefs":["RHEA:17509","EC:3.5.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"thiaminase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:THIAMINASE-RXN","KEGG_REACTION:R02133"],"synonyms":[{"name":"thiaminase II activity","type":"narrow"}],"termid":"GO:0050334","terms_by_termid":{"GO:0050334":null}}


id: GO:1990109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of pollen of one species by cells in the stigma of another species.","definition_xrefs":["PMID:21205670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of pollen from other species","synonyms":[{"name":"unilateral interspecific incompatibility","type":"exact"}],"termid":"GO:1990109"}


id: PBO:0051521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor type 2","termid":"PBO:0051521"}


id: GO:2001155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"negatively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycolytic fermentation to ethanol","synonyms":[{"name":"negative regulation of ethanol fermentation","type":"exact"},{"name":"negative regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001155"}


id: SO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5' most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_clip","synonyms":[{"name":"5' clip","type":"related"},{"name":"five prime clip","type":"exact"}],"termid":"SO:0000555"}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: PBO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Bms1 (predicted)","termid":"PBO:0003102"}


id: SO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_attribute","synonyms":[{"name":"transcript attribute","type":"exact"}],"termid":"SO:0000237"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: GO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of light-activated channel activity","termid":"GO:0016061"},{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of light-activated channel activity","synonyms":[{"name":"activation of light-activated channel activity","type":"narrow"},{"name":"stimulation of light-activated channel activity","type":"narrow"},{"name":"up regulation of light-activated channel activity","type":"exact"},{"name":"up-regulation of light-activated channel activity","type":"exact"},{"name":"upregulation of light-activated channel activity","type":"exact"}],"termid":"GO:0045832"}


id: FYPO:0004965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is inviable, is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable pear-shaped vegetative cell","termid":"FYPO:0002904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen pear-shaped vegetative cell","synonyms":[{"name":"inviable enlarged pear-shaped vegetative cell","type":"related"},{"name":"inviable enlarged volume pear-shaped vegetative cell","type":"exact"},{"name":"inviable large pear-shaped vegetative cell","type":"related"},{"name":"inviable swollen ice cream cone-shaped vegetative cell","type":"exact"},{"name":"inviable swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"inviable swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell size","type":"related"},{"name":"inviable, increased pear-shaped vegetative cell volume","type":"exact"},{"name":"lethal; swollen pear-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004965"}


id: PBO:0054626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2031","termid":"PBO:0054626"}


id: GO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase in higher eukaryotes which follows mitotic prophase and during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region. Kinetochores mature on each centromere and attach to some of the spindle microtubules. Kinetochore microtubules begin the process of aligning chromosomes in one plane halfway between the poles.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic prometaphase","termid":"GO:0000236"}


id: GO:0004040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3.","definition_xrefs":["EC:3.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"amidase activity","secondary_identifiers":["RHEA:12020","MetaCyc:AMIDASE-RXN","UM-BBD_enzymeID:e0068"],"synonyms":[{"name":"N-acetylaminohydrolase activity","type":"related"},{"name":"acetamidase activity","type":"exact"},{"name":"acylamidase activity","type":"related"},{"name":"acylamide amidohydrolase activity","type":"related"},{"name":"acylase activity","type":"related"},{"name":"amidohydrolase activity","type":"related"},{"name":"fatty acylamidase activity","type":"related"}],"termid":"GO:0004040"}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 Cyb502","termid":"PBO:0090420"}


id: PBO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 5","termid":"PBO:0042979"}


id: GO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiocyanate (SCN-) + hydrogen peroxide (H2O2) = hypothiocyanite (OSCN-) + 2 H2O. Catalyzes the hydrogen peroxide oxidation of thiocyanate.","definition_xrefs":["PMID:12626341","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiocyanate peroxidase activity","synonyms":[{"name":"lactoperoxidase activity","type":"broad"}],"termid":"GO:0036393"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: GO:0034574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: didemethylisoproturon + H2O = 4'-(2-hydroxyisopropyl)phenylurea + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"didemethylisoproturon dehydrogenase activity","secondary_identifiers":["EC:1.17.99.-"],"termid":"GO:0034574"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: PBO:0029105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_valine_level","termid":"PBO:0029105"}


id: GO:0052402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the resistance gene-dependent defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052402)","synonyms":[{"name":"activation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"activation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"activation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"activation by organism of symbiont resistance gene-dependent defense response","type":"exact"},{"name":"induction by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"induction by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"induction by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"induction by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052402"}


id: PBO:0051185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-76 (pseudogene)","termid":"PBO:0051185"}


id: PBO:0051739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 pseudogene 1","termid":"PBO:0051739"}


id: PBO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.48","termid":"PBO:0004935"}


id: PBO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf30","termid":"PBO:0000637"}


id: FYPO:0006215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cables than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"actin cables present in decreased numbers","synonyms":[{"name":"actin cables present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"actin cables present in decreased numbers during vegetative growth","type":"exact"},{"name":"actin cables present in reduced numbers","type":"exact"},{"name":"decreased level of actin cables","type":"related"},{"name":"fewer actin cables present","type":"exact"},{"name":"formin-nucleated actin cables present in decreased numbers","type":"exact"}],"termid":"FYPO:0006215"}


id: PBO:0054617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2022","termid":"PBO:0054617"}


id: PBO:0074254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B7 (putative)","termid":"PBO:0074254"}


id: GO:1905407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of creatine transmembrane transporter activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25531585","GOC:bc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of creatine transmembrane transporter activity","termid":"GO:1905407"}


id: GO:1905213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["PMID:23219725","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome condensation","termid":"GO:1902340"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"negatively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic chromosome condensation","termid":"GO:1905213"}


id: PBO:0068906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 148, pseudogene","termid":"PBO:0068906"}


id: GO:0010156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of sporocyte, the haploid spores of angiosperms which are initiated by the differentiation of a subset of floral cells into sporocytes, which then undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["PMID:10465788"],"gene_count":0,"genotype_count":0,"name":"obsolete sporocyte morphogenesis (obsolete GO:0010156)","synonyms":[{"name":"sporocyte morphogenesis","type":"exact"}],"termid":"GO:0010156"}


id: GO:0042468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the frequency or magnitude of turning behavior is altered.","definition_xrefs":["GOC:jl","PMID:2790068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"klinokinesis","termid":"GO:0042468"}


id: PBO:0061985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 4 pseudogene","termid":"PBO:0061985"}


id: PBO:0040162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase pseudogene 1","termid":"PBO:0040162"}


id: PBO:0050729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 15","termid":"PBO:0050729"}


id: PBO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase (predicted)","termid":"PBO:0001503"}


id: PBO:0043271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member B","termid":"PBO:0043271"}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: PR:O74986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctp1 gene.","definition_xrefs":["UniProtKB:O74986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease ctp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.08","synonyms":[{"name":"SAE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ctp1","type":"exact"},{"name":"double-strand break repair protein ctp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 38 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nbs1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation in the absence of SPO11 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74986"}


id: GO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA processing","synonyms":[{"name":"down regulation of mRNA processing","type":"exact"},{"name":"down-regulation of mRNA processing","type":"exact"},{"name":"downregulation of mRNA processing","type":"exact"},{"name":"inhibition of mRNA processing","type":"narrow"}],"termid":"GO:0050686"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: PBO:0054230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1612","termid":"PBO:0054230"}


id: GO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment catabolic process","termid":"GO:0046151"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"},{"relation_name":"is_a","term_name":"ocellus pigment catabolic process","termid":"GO:0046159"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome catabolic process","synonyms":[{"name":"ommochrome breakdown","type":"exact"},{"name":"ommochrome catabolism","type":"exact"},{"name":"ommochrome degradation","type":"exact"}],"termid":"GO:0046153"}


id: PBO:0077457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183B, pseudogene","termid":"PBO:0077457"}


id: PBO:0065198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 19","termid":"PBO:0065198"}


id: PBO:0058344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4717","termid":"PBO:0058344"}


id: PR:Q10139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- img2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein img2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.03","synonyms":[{"name":"Spom972h-img2","type":"exact"},{"name":"integrity of mitochondrial genome protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10139"}


id: PBO:0043731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 10","termid":"PBO:0043731"}


id: PBO:0038528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 2, acylglycerol lipase","termid":"PBO:0038528"}


id: PBO:0085693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of sterol biosynthesis; specifically stabilizes Hmg2p, one of two HMG-CoA isoenzymes that catalyze the rate-limiting step in sterol biosynthesis; homolog of mammalian INSIG proteins; NSG2 has a paralog, NSG1, that arose from the whole genome duplication","termid":"PBO:0085693"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: PBO:0077575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane inner ear","termid":"PBO:0077575"}


id: GO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by immunoglobulins, whether cell-bound or in solution.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunoglobulin mediated immune response","synonyms":[{"name":"antibody-mediated immune response","type":"exact"}],"termid":"GO:0016064"}


id: PBO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 10","termid":"PBO:0072292"}


id: PBO:0059685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 51","termid":"PBO:0059685"}


id: PBO:0064039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 73","termid":"PBO:0064039"}


id: GO:0070230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte apoptotic process","synonyms":[{"name":"activation of lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of lymphocyte apoptosis","type":"narrow"},{"name":"stimulation of lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of lymphocyte apoptosis","type":"exact"},{"name":"up-regulation of lymphocyte apoptosis","type":"exact"},{"name":"upregulation of lymphocyte apoptosis","type":"exact"}],"termid":"GO:0070230"}


id: GO:0006406
data:
  {"annotated_genes":["SJAG_04536","SJAG_00375","SJAG_01065","SJAG_04347","SJAG_04310","SJAG_03986","SJAG_04656","SJAG_01374","SJAG_00992","SJAG_04379","SJAG_01715","SJAG_04017","SJAG_01584","SJAG_00641","SJAG_01185","SJAG_03002","SJAG_02209","SJAG_05328","SJAG_03693","SJAG_04115","SJAG_00178","SJAG_01083","SJAG_00471","SJAG_03283","SJAG_03300","SJAG_04480","SJAG_02534","SJAG_04589","SJAG_04721","SJAG_00093","SJAG_01449","SJAG_04202","SJAG_04148","SJAG_01529","SJAG_04472","SJAG_02704","SJAG_00298","SJAG_03847","SJAG_01652","SJAG_04645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85180,85655,86776,93240,97273,99128,100072,101502,111007,111618,113353,113479],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[112532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[107878,103768,100073,101865,112171,114991,93089,97990,112534,111619,110576,98874,112681,102286,97515,111913,107248,114095,111105,87110,109375,88337,98775,105994,112428,88148,106561,92675,98092,104827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"mRNA transport","termid":"GO:0051028"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0010467","GO:0006913","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA export from cell nucleus","type":"exact"},{"name":"mRNA export out of nucleus","type":"exact"},{"name":"mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"mRNA-nucleus export","type":"exact"}],"termid":"GO:0006406","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null}}


id: GO:0140110
data:
  {"annotated_genes":["SJAG_01583","SJAG_03241","SJAG_02165","SJAG_03527","SJAG_01062","SJAG_02406","SJAG_00386","SJAG_01658","SJAG_02990","SJAG_01804","SJAG_03441","SJAG_02255","SJAG_02938","SJAG_04191","SJAG_05234","SJAG_03538","SJAG_01740","SJAG_06638","SJAG_01157","SJAG_02393","SJAG_02691","SJAG_03879","SJAG_00441","SJAG_00802","SJAG_01113","SJAG_01711","SJAG_01111","SJAG_02709","SJAG_03911","SJAG_02730","SJAG_04389","SJAG_01778","SJAG_00540","SJAG_05006","SJAG_03590","SJAG_00698","SJAG_04839","SJAG_00297","SJAG_00163","SJAG_04036","SJAG_06576","SJAG_00184","SJAG_04421","SJAG_03346","SJAG_00210","SJAG_02922","SJAG_02752","SJAG_02385","SJAG_03668","SJAG_04749","SJAG_06599","SJAG_02846","SJAG_00164","SJAG_05343","SJAG_05337","SJAG_03776","SJAG_04820","SJAG_01707","SJAG_02209","SJAG_00909","SJAG_02849","SJAG_02097","SJAG_00979","SJAG_00664","SJAG_00342","SJAG_04613","SJAG_00584","SJAG_01930","SJAG_03924","SJAG_05288","SJAG_03143","SJAG_01343","SJAG_01243","SJAG_02569","SJAG_01475","SJAG_00269","SJAG_04607","SJAG_04249","SJAG_00290","SJAG_04381","SJAG_03211","SJAG_03289","SJAG_04813","SJAG_01728","SJAG_00926","SJAG_03473","SJAG_04099","SJAG_05341","SJAG_04712","SJAG_00792","SJAG_04855","SJAG_00693","SJAG_02458","SJAG_00987","SJAG_05153","SJAG_04396","SJAG_04584","SJAG_02810","SJAG_04092","SJAG_04647","SJAG_03664","SJAG_03481","SJAG_00087","SJAG_03484","SJAG_00124","SJAG_04009","SJAG_00613","SJAG_01532","SJAG_02196","SJAG_01916","SJAG_00904","SJAG_01441","SJAG_00073","SJAG_02391","SJAG_00861","SJAG_01307","SJAG_01725","SJAG_02066","SJAG_02831","SJAG_03627","SJAG_04388","SJAG_02238","SJAG_03918","SJAG_05203","SJAG_01771","SJAG_03519","SJAG_02149","SJAG_03981","SJAG_02494","SJAG_03622","SJAG_01403","SJAG_00266","SJAG_04353","SJAG_02541","SJAG_00641","SJAG_04921","SJAG_03573","SJAG_02052","SJAG_00809","SJAG_03599","SJAG_02956","SJAG_04186","SJAG_02472","SJAG_03845","SJAG_04374","SJAG_02048","SJAG_04205","SJAG_02927","SJAG_02311","SJAG_02218","SJAG_01952","SJAG_04705","SJAG_04213","SJAG_02326","SJAG_05247","SJAG_02138","SJAG_00483","SJAG_03735","SJAG_01694","SJAG_03388","SJAG_01926","SJAG_00156","SJAG_00304","SJAG_03183","SJAG_02671","SJAG_04274","SJAG_02252","SJAG_02898","SJAG_00037"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001216"},{"annotations":[103183,95927,108053,110209,112191,114139,104109,106861,109814,100904,84157,103713,90877,94562,112586,83791,86268,94253,105322,96620,100567,85637,84651,88060,84975,91837,93441,98409,105184,113578,85219,89433,89856,101960,84228,92420,102233,110696,104939,95626,108052,88897,105831,108012,105321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"},{"annotations":[77214,71186,72033,105185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003700"},{"annotations":[91838,93664,112724,93201,106862,100574,105492,88612,93667,107191,92717,104356,96246,107032,93663,100568,114419,84595,104769,93666,93070,98824,109536,93665,99687,57118,98359,89374,107000,65513,111740,92184,88898,110949,102234,93518,107016,98175,97613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000981"},{"annotations":[90860,112192,90209,100569,102376,104940,79320,89434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[92530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"},{"annotations":[83614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034246"},{"annotations":[85292,86847,98990,101891,103031,91524,103187,107883,110845,113651,85883,108678,102360,103941,111496,99299,91674,93962,104857,115153,84540,90480,103819,85461,99498,95155,104367,99811,94714,113698,86538,114998,92004,104883,90587,103461,108424,110429,95421,98086,99548,94811,102493,109107,115152,89638,112404,94641,83652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[76307,113840,92032,84978,104590,111371,91222,86924,76761,95100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003712"},{"annotations":[89336,100386,100445,100329,110268,97100,93365,101148,102859,87406,100087,89371,103131,95016,108221,89925,98911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"},{"annotations":[110195,114013,88785,102288,104026,109316,101632,102951,88121,90094,96048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003711"}]},"cv_name":"molecular_function","definition":"A molecular function that controls the rate, timing and/or magnitude of gene transcription. The function of transcriptional regulators is to modulate gene expression at the transcription step so that they are expressed in the right cell at the right time and in the right amount throughout the life of the cell and the organism. 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id: GO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to DNA in a random coil configuration.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete random coil DNA binding (obsolete GO:0003695)","synonyms":[{"name":"random coil binding","type":"exact"}],"termid":"GO:0003695"}


id: GO:1904466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["PMID:8679543","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"positively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of matrix metallopeptidase secretion","synonyms":[{"name":"activation of MMP secretion","type":"narrow"},{"name":"activation of matrix metallopeptidase secretion","type":"narrow"},{"name":"activation of matrix metalloproteinase secretion","type":"narrow"},{"name":"positive regulation of MMP secretion","type":"exact"},{"name":"positive regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up regulation of MMP secretion","type":"exact"},{"name":"up regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up-regulation of MMP secretion","type":"exact"},{"name":"up-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"upregulation of MMP secretion","type":"exact"},{"name":"upregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"upregulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904466"}


id: GO:0036316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the SREBP-SCAP complex is maintained in the endoplasmic reticulum and prevented from moving elsewhere. The SREBP-SCAP complex is formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP). In the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed. In the presence of sterols, the complex binds ER-resident proteins such as INSIG, which retain the complex in the ER.","definition_xrefs":["GOC:bf","PMID:16525117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in endoplasmic reticulum","termid":"GO:0035437"},{"relation_name":"is_a","term_name":"negative regulation of SREBP signaling pathway","termid":"GO:2000639"},{"relation_name":"part_of","term_name":"cellular response to sterol","termid":"GO:0036315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SREBP-SCAP complex retention in endoplasmic reticulum","termid":"GO:0036316"}


id: PR:Q09679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh1 gene.","definition_xrefs":["UniProtKB:Q09679","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.11","synonyms":[{"name":"Spom972h-gmh1","type":"exact"}],"termid":"PR:Q09679"}


id: GO:0036057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.","definition_xrefs":["PMID:15994232","PMID:12386277","PMID:18971929","GOC:mtg_kidney_jan10","GOC:rph","PMID:19478094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm","termid":"GO:0036056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"slit diaphragm","termid":"GO:0036057"}


id: PBO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 11","termid":"PBO:0044885"}


id: GO:0010045
data:
  {"annotated_genes":["SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98435],"is_not":false,"summary":null,"term":"GO:0010045"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nickel cation stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nickel cation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to nickel","type":"exact"}],"termid":"GO:0010045","terms_by_termid":{"GO:0010045":null}}


id: GO:0000275
data:
  {"annotated_genes":["SJAG_03114","SJAG_02598","SJAG_00438","SJAG_00915","SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88988,85306],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[99164,101122,104918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005756"}]},"cv_name":"cellular_component","definition":"The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex","termid":"GO:0005753"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275","terms_by_termid":{"GO:0005754":null,"GO:0005756":null}}


id: PBO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 1","termid":"PBO:0052118"}


id: PBO:0055037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2452","termid":"PBO:0055037"}


id: GO:1905516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fertilization.","definition_xrefs":["GOC:TermGenie","PMID:27564576","GO_REF:0000058","GOC:hbye"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fertilization","synonyms":[{"name":"activation of fertilization","type":"narrow"},{"name":"activation of syngamy","type":"narrow"},{"name":"positive regulation of syngamy","type":"exact"},{"name":"up regulation of fertilization","type":"exact"},{"name":"up regulation of syngamy","type":"exact"},{"name":"up-regulation of fertilization","type":"exact"},{"name":"up-regulation of syngamy","type":"exact"},{"name":"upregulation of fertilization","type":"exact"},{"name":"upregulation of syngamy","type":"exact"}],"termid":"GO:1905516"}


id: PBO:0036135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_acetylation_during_vegetative_growth","termid":"PBO:0036135"}


id: PBO:0072702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB like AAA ATPase 2","termid":"PBO:0072702"}


id: PBO:0089986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg3","termid":"PBO:0089986"}


id: PBO:0036028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-beta-D-glucan_level_in_periplasmic_space","termid":"PBO:0036028"}


id: GO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminoethylphosphonate, most abundant and ubiquitous of naturally occurring phosphonates. It is typically found as a conjugate of glycans, lipids, and proteins, which in turn perform essential biochemical functions in specialized lower organisms.","definition_xrefs":["GOC:ai","PMID:12107130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate metabolic process","synonyms":[{"name":"2-aminoethylphosphonate metabolism","type":"exact"},{"name":"2-phosphonoethylamine metabolic process","type":"exact"},{"name":"2-phosphonoethylamine metabolism","type":"exact"},{"name":"ciliatine metabolic process","type":"exact"},{"name":"ciliatine metabolism","type":"exact"}],"termid":"GO:0046433"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: GO:0030972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of proteins in the cytosol that contributes to apoptosis.","definition_xrefs":["GOC:tb","ISBN:0815332181","GOC:dph","GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytosolic proteins involved in execution phase of apoptosis (obsolete GO:0030972)","synonyms":[{"name":"apoptotic cleavage of cytosolic proteins","type":"exact"},{"name":"cleavage of cytosolic proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytosolic proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0030972"}


id: GO:0098982
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses GABA as a neurotransmitter. These synapses are typically inhibitory.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"GABA-ergic synapse","termid":"GO:0098982"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: PBO:0090628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid9","termid":"PBO:0090628"}


id: PBO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 1","termid":"PBO:0048390"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_during_cellular_response_to_reactive_oxygen_species","termid":"PBO:0036090"}


id: SO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The kink turn (K-turn) is an RNA structural motif that creates a sharp (~120 degree) bend between two continuous helices.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K_turn_RNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/K-turn"],"synonyms":[{"name":"K turn RNA motif","type":"exact"},{"name":"K-turn","type":"exact"},{"name":"kink turn","type":"exact"},{"name":"kink-turn motif","type":"exact"}],"termid":"SO:0000023"}


id: GO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin-mediated signaling pathway that contributes to a circulatory system process carried out by the heart, where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). DAG activates protein kinase C (PKC), whilst IP3 binds intracellular receptors to induce the release of Ca2+ from intracellular stores.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating angiotensin-activated signaling pathway","termid":"GO:0086097"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway involved in heart process","termid":"GO:0086098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signaling pathway via activation of phospholipase C involved in heart process","type":"exact"},{"name":"cardiac angiotensin receptor signaling pathway via activation of PLC","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086099"}


id: PBO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP61 antisense RNA 1","termid":"PBO:0042852"}


id: PATO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light orange","termid":"PATO:0001255"}


id: GO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["UM-BBD_reactionID:r0745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity","termid":"GO:0018475"}


id: GO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The delamination process that results in the shedding of a corneocyte from the surface of the epidermis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"corneocyte development","termid":"GO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"corneocyte desquamation","synonyms":[{"name":"epidermal desquamation","type":"exact"}],"termid":"GO:0003336"}


id: PBO:0062387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 7 pseudogene","termid":"PBO:0062387"}


id: GO:0071673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell migration","termid":"GO:0014911"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell chemotaxis","synonyms":[{"name":"activation of smooth muscle cell chemotaxis","type":"narrow"},{"name":"stimulation of smooth muscle cell chemotaxis","type":"narrow"},{"name":"up regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"up-regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"upregulation of smooth muscle cell chemotaxis","type":"exact"}],"termid":"GO:0071673"}


id: PR:Q10435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase TRIP12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01893","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein C12B10.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.01c","secondary_identifiers":["UniProtKB:Q10435"],"synonyms":[{"name":"Spom972h-TRIP12","type":"exact"}],"termid":"PR:Q10435"}


id: PBO:0016526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase-like protein Cys12","termid":"PBO:0016526"}


id: FYPO:0008095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during G0.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"increased cell size during G0","termid":"FYPO:0008095"}


id: PBO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phosphate phosphatase Gep4 (predicted)","termid":"PBO:0034808"}


id: GO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.250","RHEA:17389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.250-RXN","KEGG_REACTION:R07134"],"synonyms":[{"name":"D-arabinitol 2-dehydrogenase (ribulose-forming) activity","type":"related"},{"name":"D-arabinitol:NAD+ 2-oxidoreductase (D-ribulose-forming)","type":"related"}],"termid":"GO:0047038"}


id: GO:0002886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"}


id: PBO:0055465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2898","termid":"PBO:0055465"}


id: PBO:0060784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10 pseudogene 2","termid":"PBO:0060784"}


id: PBO:0056056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumican","termid":"PBO:0056056"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: GO:0052470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction pathway (obsolete GO:0052470)","termid":"GO:0052470"}


id: PBO:0080935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 1","termid":"PBO:0080935"}


id: GO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of one or more nucleotides.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide insertion","termid":"GO:0070705"}


id: GO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to the fizzy family APC activator Cdc20/Slp1 which regulates the metaphase anaphase transition by activating the APC/C to target the anaphase inhibitor securin and promotes sister chromatid separation.","definition_xrefs":["PMID:10921876","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete APC-Cdc20 complex (obsolete GO:0090620)","synonyms":[{"name":"APC-Slp1 complex","type":"exact"},{"name":"APC-fizzy complex","type":"exact"},{"name":"mitotic anaphase promotic complex","type":"related"}],"termid":"GO:0090620"}


id: GO:0046466
data:
  {"annotated_genes":["SJAG_01219","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86003,104950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"membrane lipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid breakdown","type":"exact"},{"name":"membrane lipid catabolism","type":"exact"},{"name":"membrane lipid degradation","type":"exact"},{"name":"membrane lipid peroxidation","type":"broad"}],"termid":"GO:0046466","terms_by_termid":{"GO:0046521":null}}


id: GO:1990265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of two chains of platelet-derived growth factor (PDGF) subunits. PDGF dimers bind to PDGF receptors in the plasma membrane and induce receptor dimerization and activation. PDGFs are involved in a wide variety of signaling processes. PDGFs are found in all vertebrates where at least 2 different chains (A and B) exist. In human (and other mammals), four types of PDGF chains (A, B, C, and D) are known which form five different dimers (AA, AB, BB, CC and DD).","definition_xrefs":["PMID:11331882","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor complex","termid":"GO:0036454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"platelet-derived growth factor complex","synonyms":[{"name":"PDGF complex","type":"related"},{"name":"PDGF-AA dimer","type":"narrow"},{"name":"PDGF-AB dimer","type":"narrow"},{"name":"PDGF-BB dimer","type":"narrow"},{"name":"PDGF-CC dimer","type":"narrow"},{"name":"PDGF-DD dimer","type":"narrow"}],"termid":"GO:1990265"}


id: GO:0140994
data:
  {"annotated_genes":["SJAG_01286","SJAG_03624","SJAG_00150","SJAG_03967","SJAG_02389","SJAG_01654","SJAG_00342","SJAG_02203","SJAG_03126","SJAG_02592","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91950,102171,93976,90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008353"},{"annotations":[93338,87748,89787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[91951,102172,105176,90478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140834"},{"annotations":[102173,90479,105177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140836"},{"annotations":[91977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[108093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"A catalytic activity that acts on the RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS). Reversible modifications cof the RNA polymerase II CTD repeats contribute to regulation of RNA polymerase activity.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01286":null,"SJAG_01654":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_03061":null,"SJAG_03126":null,"SJAG_03624":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat modifying activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II CTD repeat modifying activity","type":"exact"},{"name":"RNA polymerase II large subunit CTD heptapeptide repeat modifying activity","type":"exact"}],"termid":"GO:0140994","terms_by_termid":{"GO:0008353":null,"GO:0008420":null,"GO:0140834":null,"GO:0140836":null,"GO:0180005":null,"GO:0180007":null}}


id: PBO:0081447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 311","termid":"PBO:0081447"}


id: PBO:0025532
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ketothiolase deficiency","termid":"PBO:0025532"}


id: PBO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 45","termid":"PBO:0071626"}


id: PBO:0054319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1711","termid":"PBO:0054319"}


id: PBO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 25","termid":"PBO:0071607"}


id: FYPO:0006468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature ribosomal RNA (rRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"altered mature rRNA level during vegetative growth","synonyms":[{"name":"abnormal rRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature rRNA level during vegetative growth","type":"exact"},{"name":"altered mature rRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature rRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature ribosomal RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006468"}


id: PBO:0040776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 2","termid":"PBO:0040776"}


id: GO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta3 and gamma2 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-5 complex","synonyms":[{"name":"laminin-332 complex","type":"narrow"},{"name":"laminin-3A32 complex","type":"exact"},{"name":"laminin-5A complex","type":"exact"}],"termid":"GO:0005610"}


id: GO:0009924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octadecanal = heptadecane + CO.","definition_xrefs":["GOC:tb","EC:4.1.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde decarbonylase activity","termid":"GO:0071771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"octadecanal decarbonylase activity","secondary_identifiers":["MetaCyc:OCTADECANAL-DECARBONYLASE-RXN","RHEA:30415"],"synonyms":[{"name":"octadecanal alkane-lyase activity","type":"exact"}],"termid":"GO:0009924"}


id: GO:0031472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of 1,2-propanediol whose purpose is the protection of the rest of the cell from the toxic propionaldehyde product of the enzyme diol dehydratase.","definition_xrefs":["PMID:11844753","PMID:10498708","GOC:js","PMID:12923081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"propanediol degradation polyhedral organelle","termid":"GO:0031472"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01959","PANTHER:PTHR10048:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: GO:0018477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NADP+ + H2O = benzoate + NADPH + H+.","definition_xrefs":["EC:1.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzaldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0019115"},{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:21660","MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN","UM-BBD_enzymeID:e0079"],"synonyms":[{"name":"NADP-linked benzaldehyde dehydrogenase","type":"related"},{"name":"benzaldehyde:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0018477"}


id: GO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075332)","termid":"GO:0075332"}


id: PBO:0027035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytokinesis_in_presence_of_assembled_mitotic_spindle","termid":"PBO:0027035"}


id: GO:0035118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"pectoral fin morphogenesis","termid":"GO:0035138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pectoral fin morphogenesis","termid":"GO:0035118"}


id: PBO:0064281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M2","termid":"PBO:0064281"}


id: PBO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 2","termid":"PBO:0051729"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: PBO:0041875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 2","termid":"PBO:0041875"}


id: PBO:0060441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 10","termid":"PBO:0060441"}


id: GO:0010722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrochelatase activity; catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferrochelatase activity","termid":"GO:0010722"}


id: _global:precedes
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","secondary_identifiers":["BFO:0000063"],"termid":"_global:precedes"}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PBO:0054348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1741","termid":"PBO:0054348"}


id: PBO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/calcium exchanger (predicted)","termid":"PBO:0000970"}


id: PR:O59866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04644","PANTHER:PTHR10830:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.15","secondary_identifiers":["UniProtKB:O59866"],"synonyms":[{"name":"Spom972h-DDOST","type":"exact"},{"name":"oligosaccharyl transferase 48 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59866"}


id: PBO:0044516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase","termid":"PBO:0044516"}


id: GO:0009967
data:
  {"annotated_genes":["SJAG_03903","SJAG_00329","SJAG_04496","SJAG_02605","SJAG_04259","SJAG_01150","SJAG_01805","SJAG_00845","SJAG_00561","SJAG_00457","SJAG_02183","SJAG_02945","SJAG_03371","SJAG_01837","SJAG_00781","SJAG_03936","SJAG_06588","SJAG_02424","SJAG_05030","SJAG_03453","SJAG_00027","SJAG_04776","SJAG_00082","SJAG_01181","SJAG_04910","SJAG_00318","SJAG_03568","SJAG_06592","SJAG_00209","SJAG_02486","SJAG_03828","SJAG_01978","SJAG_03048","SJAG_03405","SJAG_02135","SJAG_02231","SJAG_05184","SJAG_01587","SJAG_06622","SJAG_01632","SJAG_03089","SJAG_00143","SJAG_04551","SJAG_06621","SJAG_01199","SJAG_02682","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107109,98275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[109916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[105078,107952,91395,105075,105073,105074,105077,105079,105076,113462,114346,108609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[111692,87009,99834,110737,84340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[83733,98516,89951,86174,106657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[109565,89824,109564,109566,89825,89826,113092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[102699,101250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[84508,94147,85595,108986,84219,92239,114434,105400,90455,103278,106674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[87344,93886,103122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00329":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0035468"],"synonyms":[{"name":"activation of signal transduction","type":"narrow"},{"name":"positive regulation of signaling pathway","type":"related"},{"name":"positive regulation of signalling pathway","type":"related"},{"name":"stimulation of signal transduction","type":"narrow"},{"name":"up regulation of signal transduction","type":"exact"},{"name":"up-regulation of signal transduction","type":"exact"},{"name":"upregulation of signal transduction","type":"exact"}],"termid":"GO:0009967","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0046579":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: PBO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 3","termid":"PBO:0046685"}


id: PBO:0062784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 2","termid":"PBO:0062784"}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: GO:0021905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the creation of the forebrain-midbrain boundary.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","PMID:11262869","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain-midbrain boundary formation","termid":"GO:0021905"}


id: PBO:0062927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y14","termid":"PBO:0062927"}


id: PR:O42970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C1E8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.05","synonyms":[{"name":"Spom972h-SPBC1E8.05","type":"exact"}],"termid":"PR:O42970"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: GO:0014886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of slow-contracting muscle fibers to a faster character. This may involve increasing of contractile rate, fast myosin gene induction, increase in glycolytic metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between slow and fast fiber","synonyms":[{"name":"transition between slow and fast fibre","type":"exact"},{"name":"transition slow-fast fiber","type":"exact"},{"name":"transition slow-fast fibre","type":"exact"}],"termid":"GO:0014886"}


id: PR:O13717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.10c gene.","definition_xrefs":["UniProtKB:O13717","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.10c","synonyms":[{"name":"Spom972h-SPAC14C4.10c","type":"exact"}],"termid":"PR:O13717"}


id: PBO:0055313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2741","termid":"PBO:0055313"}


id: PBO:0043324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 2","termid":"PBO:0043324"}


id: PBO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 6","termid":"PBO:0075150"}


id: GO:0034557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxylaminobenzoate + NAD(P)H = anthranilate + NAD(P)+ + H2O.","definition_xrefs":["MetaCyc:RXN-8848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxylaminobenzoate reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0850"],"synonyms":[{"name":"o-hydroxylaminobenzoate nitroreductase activity","type":"related"}],"termid":"GO:0034557"}


id: PR:Q9UU86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xenotropic and polytropic retrovirus receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05053","PANTHER:PTHR10783:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein SYG1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.07c","secondary_identifiers":["UniProtKB:Q9UU86"],"synonyms":[{"name":"Spom972h-XPR1","type":"exact"}],"termid":"PR:Q9UU86"}


id: GO:0050141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitroethane + H2O + O2 = acetaldehyde + nitrite + H2O2.","definition_xrefs":["EC:1.7.3.1","MetaCyc:NITROETHANE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitroalkane oxidase activity","termid":"GO:0052664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitroethane oxidase activity","synonyms":[{"name":"nitroethane reductase activity","type":"related"},{"name":"nitroethane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050141"}


id: PBO:0062844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1 pseudogene 1","termid":"PBO:0062844"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: PBO:0034736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120","termid":"PBO:0034736"}


id: PBO:0039203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 6","termid":"PBO:0039203"}


id: FYPO:0000706
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal molecular function","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000706","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:1900992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (-)-secologanin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin metabolic process (obsolete GO:1900992)","synonyms":[{"name":"(-)-secologanin metabolism","type":"exact"}],"termid":"GO:1900992"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["PMID:25677106","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: GO:0140081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylated region of a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glycosylated region protein binding","termid":"GO:0140081"}


id: SO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a sequence that is regulated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated","termid":"SO:0000119"}


id: PBO:0052437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC2 antisense RNA 2","termid":"PBO:0052437"}


id: GO:1903305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:TermGenie","GOC:pad","PMID:12526776","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of regulated secretory pathway","termid":"GO:1903305"}


id: PBO:0069220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 475, pseudogene","termid":"PBO:0069220"}


id: GO:0046715
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107095],"is_not":false,"summary":null,"term":"GO:0046715"}]},"cv_name":"molecular_function","definition":"Enables the transport of borate across a membrane against the concentration gradient.","definition_xrefs":["PMID:12447444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"active borate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0080138"],"synonyms":[{"name":"borate transmembrane transporter activity","type":"broad"},{"name":"borate uptake transmembrane transporter activity","type":"related"},{"name":"boron transmembrane transporter activity","type":"related"},{"name":"boron uptake transmembrane transporter activity","type":"related"},{"name":"efflux-type borate transporter","type":"narrow"},{"name":"efflux-type boron transporter","type":"related"}],"termid":"GO:0046715","terms_by_termid":{"GO:0046715":null}}


id: PBO:0059854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7","termid":"PBO:0059854"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016829","GO:0140098","GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: GO:0006040
data:
  {"annotated_genes":["SJAG_03723","SJAG_00978","SJAG_00519","SJAG_00620","SJAG_03013","SJAG_00442","SJAG_01443","SJAG_04868","SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87912,97636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[100787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[98914,84725,84387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"},{"annotations":[98916,84726,84388,57736,98815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00519":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03013":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar metabolism","type":"exact"},{"name":"aminosaccharide metabolic process","type":"exact"},{"name":"aminosaccharide metabolism","type":"exact"}],"termid":"GO:0006040","terms_by_termid":{"GO:0006038":null,"GO:0006048":null,"GO:0034217":null,"GO:0034221":null,"GO:0034232":null}}


id: PBO:0086442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase; involved in lipid metabolism; not an essential gene; YDL109C has a paralog, ROG1, that arose from the whole genome duplication","termid":"PBO:0086442"}


id: PBO:0078611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64B","termid":"PBO:0078611"}


id: PBO:0063867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A","termid":"PBO:0063867"}


id: FYPO:0006803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a DNA-directed DNA polymerase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-directed DNA polymerase activity","termid":"FYPO:0004519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0005447","FYPO:0000654","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abolished DNA-directed DNA polymerase activity","synonyms":[{"name":"DNA-directed DNA polymerase activity abolished","type":"exact"},{"name":"abolished DNA polymerase activity","type":"broad"}],"termid":"FYPO:0006803"}


id: PBO:0041443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf78 pseudogene 2","termid":"PBO:0041443"}


id: FYPO:0000731
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115225,115226],"is_not":false,"summary":null,"term":"FYPO:0000731"},{"annotations":[115197,115204,115196,115208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0000731","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxynaphthalene-6-sulfonate + O2 = H+ + (Z)-4-(2-hydroxy-5-sulfonatophenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxynaphthalene-6-sulfonate 1,8a-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"synonyms":[{"name":"1,2-dihydroxynaphthalene-6-sulphonate 1,8a-dioxygenase activity","type":"exact"}],"termid":"GO:0018566"}


id: GO:0052227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism resulting in the breakdown of substances, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism of substance in other organism involved in symbiotic interaction (obsolete GO:0052227)","synonyms":[{"name":"catabolism of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052227"}


id: PBO:0069682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 959, pseudogene","termid":"PBO:0069682"}


id: PBO:0056669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 7","termid":"PBO:0056669"}


id: PBO:0041181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A3","termid":"PBO:0041181"}


id: PBO:0086153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; interacts with Cdc12p; AFR1 has a paralog, YER158C, that arose from the whole genome duplication","termid":"PBO:0086153"}


id: PBO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 4","termid":"PBO:0050867"}


id: PR:Q9HDW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12993:SF2","OMA:SCHPO01136","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.01c","secondary_identifiers":["UniProtKB:Q9HDW9"],"synonyms":[{"name":"Spom972h-PIGL","type":"exact"}],"termid":"PR:Q9HDW9"}


id: PBO:0018240
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"requires a single stranded telomeric overhang for T-loop formation","termid":"PBO:0018240"}


id: SO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specialized region in the genomes of some yeast and fungi, the genes of which regulate mating type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Mating-type_region"],"synonyms":[{"name":"mating type region","type":"exact"}],"termid":"SO:0001789"}


id: FYPO:0000061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"multinucleate vegetative cell","synonyms":[{"name":"multinucleate cells during vegetative growth","type":"exact"},{"name":"multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"multiple nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0000061"}


id: GO:0044186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any particle of coalesced lipids in the cytoplasm of a host cell. May include associated proteins.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lipid droplet","synonyms":[{"name":"host cell lipid adiposome","type":"exact"},{"name":"host cell lipid body","type":"exact"},{"name":"host cell lipid particle","type":"exact"}],"termid":"GO:0044186"}


id: PBO:0051560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 11 receptor subunit alpha","termid":"PBO:0051560"}


id: PBO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 27","termid":"PBO:0070797"}


id: GO:0032062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to osmotic stress","synonyms":[{"name":"activation of translation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation in response to osmotic stress","type":"exact"}],"termid":"GO:0032062"}


id: PBO:0062724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 1","termid":"PBO:0062724"}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: PBO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 21","termid":"PBO:0046640"}


id: FYPO:0003929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ionizing radiation.","definition_xrefs":["PMID:24847916","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to ionizing radiation","synonyms":[{"name":"sensitive to ionizing radiation in the spore phase","type":"exact"},{"name":"spores sensitive to IR","type":"exact"}],"termid":"FYPO:0003929"}


id: PBO:0057864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3175","termid":"PBO:0057864"}


id: PBO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus2 (predicted)","termid":"PBO:0003473"}


id: _global:pathogen_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathogen_of","secondary_identifiers":["RO:0002556"],"termid":"_global:pathogen_of"}


id: PBO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 2","termid":"PBO:0044385"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: GO:0140663
data:
  {"annotated_genes":["SJAG_02895","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95066,96158],"is_not":false,"summary":null,"term":"GO:0140663"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein, driven by ATP hydrolysis.","definition_xrefs":["PMID:16843540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02895":null,"SJAG_02994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent FeS chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140663","terms_by_termid":{"GO:0140663":null}}


id: PBO:0075261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 14","termid":"PBO:0075261"}


id: PBO:0080870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YKT6 v-SNARE homolog","termid":"PBO:0080870"}


id: PBO:0077630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 2","termid":"PBO:0077630"}


id: GO:1904938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Wnt signaling pathway, planar cell polarity pathway that is involved in axon guidance.","definition_xrefs":["GOC:bf","GO_REF:0000060","GOC:TermGenie","PMID:21106844","GOC:PARL","PMID:23517308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"planar cell polarity pathway involved in axon guidance","synonyms":[{"name":"PCP pathway involved in axon chemotaxis","type":"related"},{"name":"PCP pathway involved in axon growth cone guidance","type":"narrow"},{"name":"PCP pathway involved in axon guidance","type":"exact"},{"name":"PCP pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"Wnt-JNK signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon guidance","type":"related"},{"name":"Wnt-JNK signaling pathway involved in axon pathfinding","type":"related"},{"name":"Wnt-PCP signaling involved in axon guidance","type":"exact"},{"name":"Wnt-PCP signaling pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon guidance","type":"related"},{"name":"Wnt-PCP signaling pathway involved in axon pathfinding","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon guidance","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in axon pathfinding","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in axon chemotaxis","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon growth cone guidance","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon guidance","type":"related"},{"name":"non-canonical Wnt signaling pathway involved in axon pathfinding","type":"related"},{"name":"planar cell polarity pathway involved in axon chemotaxis","type":"related"},{"name":"planar cell polarity pathway involved in axon growth cone guidance","type":"narrow"},{"name":"planar cell polarity pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:1904938"}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: PBO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 5","termid":"PBO:0047337"}


id: PR:Q9HDZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PGAP2-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14859:SF0","PRO:DNx","OMA:SCHPO01302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cwh43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.12","secondary_identifiers":["UniProtKB:Q9HDZ2"],"synonyms":[{"name":"Spom972h-CWH43","type":"exact"}],"termid":"PR:Q9HDZ2"}


id: GO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant vasodilation of blood vessels, usually causing a reduction in blood pressure, in the bitten/stung organism.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:21050868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of blood pressure in another organism","termid":"GO:0044500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in vasodilation in another organism","synonyms":[{"name":"envenomation resulting in modulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in regulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in vasodilation in other organism","type":"exact"}],"termid":"GO:0044551"}


id: PATO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000664 substance_quantity (obsolete PATO:0000664)","termid":"PATO:0000664"}


id: PBO:0006197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_at","termid":"PBO:0006197"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"regulates","term_name":"mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0062021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0106114"}


id: GO:0072503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic cation homeostasis (obsolete GO:0072503)","termid":"GO:0072503"}


id: PBO:0063688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase","termid":"PBO:0063688"}


id: PBO:0053438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 383","termid":"PBO:0053438"}


id: PBO:0039825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 2","termid":"PBO:0039825"}


id: PBO:0051363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-20","termid":"PBO:0051363"}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: PBO:0072192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 9","termid":"PBO:0072192"}


id: GO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to chromosome","synonyms":[{"name":"regulation of establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070202"}


id: GO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.","definition_xrefs":["PMID:15239959","GOC:BHF","GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway","synonyms":[{"name":"semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:0071526"}


id: PBO:0063100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator gamma","termid":"PBO:0063100"}


id: PBO:0054020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1350","termid":"PBO:0054020"}


id: FYPO:0006331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal when the population in which the mating cells are found is in stationary phase.","definition_xrefs":["PomBase:al","PMID:25204792","PMID:28160081","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency during stationary phase","synonyms":[{"name":"reduced mating efficiency during stationary phase","type":"exact"}],"termid":"FYPO:0006331"}


id: PBO:0029617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029617"}


id: GO:0043551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidylinositol 3-kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043551)","synonyms":[{"name":"regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043551"}


id: GO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a filamin, any member of a family of high molecular mass cytoskeletal proteins that crosslink actin filaments to form networks and stress fibers. Filamins contain an amino-terminal alpha-actinin-like actin binding domain, which is followed by a rod-domain composed of 4 to 24 100-residue repetitive segments including a carboxy-terminal dimerization domain.","definition_xrefs":["GOC:mah","PMID:11336782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"filamin binding","secondary_identifiers":["GO:0031007","GO:0031006","GO:0031008"],"synonyms":[{"name":"filamin B binding","type":"narrow"},{"name":"ABP-278/276 binding","type":"narrow"},{"name":"ABP-280 binding","type":"narrow"},{"name":"ABPL binding","type":"narrow"},{"name":"alpha-filamin binding","type":"narrow"},{"name":"beta-filamin binding","type":"narrow"},{"name":"filamin A binding","type":"narrow"},{"name":"filamin C binding","type":"exact"},{"name":"filamin-1 binding","type":"narrow"},{"name":"filamin-2 binding","type":"narrow"},{"name":"filamin-3 binding","type":"narrow"},{"name":"filamin-A binding","type":"narrow"},{"name":"filamin-B binding","type":"exact"},{"name":"filamin-C binding","type":"narrow"},{"name":"gamma-filamin binding","type":"narrow"}],"termid":"GO:0031005"}


id: PBO:0041150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 5","termid":"PBO:0041150"}


id: GO:0008443
data:
  {"annotated_genes":["SJAG_00039","SJAG_02713","SJAG_02596","SJAG_03336","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96063,89001,85153,97498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003873"},{"annotations":[100590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to a phosphofructose substrate molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00605":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008443","terms_by_termid":{"GO:0003872":null,"GO:0003873":null}}


id: PBO:0072831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 1","termid":"PBO:0072831"}


id: GO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of polypeptides, preferably at the first bond of Xaa-Arg-Lys, and less commonly at the first bond of Arg-Arg-Xaa, in which Xaa is not Arg or Lys.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nardilysin activity (obsolete GO:0016919)","synonyms":[{"name":"N-arginine dibasic convertase activity","type":"related"},{"name":"NRD convertase activity","type":"related"},{"name":"NRD-convertase activity","type":"related"},{"name":"nardilysin activity","type":"exact"}],"termid":"GO:0016919"}


id: PR:000050530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me2(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf1/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050530"}


id: PBO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation regulator Ppr4","termid":"PBO:0002162"}


id: FYPO:0001910
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115473],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein glycosylation during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal protein glycosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001910","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: GO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to euchromatin and the nuclear inner membrane, in order to establish and maintain the euchromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"euchromatin-nuclear membrane anchor activity","synonyms":[{"name":"euchromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-euchromatin anchor activity","type":"exact"},{"name":"nuclear membrane-euchromatin tether activity","type":"exact"}],"termid":"GO:0062240"}


id: PBO:0052871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRTAP5-1/KRTAP5-2 antisense RNA 1","termid":"PBO:0052871"}


id: FYPO:0001838
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115246,115250],"is_not":false,"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001838","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0055031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2446","termid":"PBO:0055031"}


id: GO:0102597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin E + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 9-beta-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15381","RHEA:41468"],"termid":"GO:0102597"}


id: PBO:0065173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 1","termid":"PBO:0065173"}


id: PBO:0064775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 1","termid":"PBO:0064775"}


id: PR:Q9URZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.11","synonyms":[{"name":"Spom972h-cat1","type":"exact"}],"termid":"PR:Q9URZ4"}


id: PBO:0004224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.6.1.1","termid":"PBO:0004224"}


id: GO:1990495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An actin filament organization process that contributes to actomyosin contractile ring assembly during mitotic cytokinesis.","definition_xrefs":["PMID:8834798"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly (obsolete GO:1990495)","synonyms":[{"name":"actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1990495"}


id: GO:0042941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-alanine, the D-enantiomer of 2-aminopropanoic acid,  is transported across a lipid bilayer, from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GO:ew","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"alanine transport","termid":"GO:0032328"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"D-alanine transmembrane transport","termid":"GO:0042941"}


id: PBO:0039532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34C","termid":"PBO:0039532"}


id: FYPO:0007000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a normal (i.e. indistinguishable from wild type) extent at transposable elements. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:26518661","PomBase:mah","GO:0005721","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal histone exchange at transposable element","synonyms":[{"name":"normal histone exchange at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone exchange at transposable element during vegetative growth","type":"exact"},{"name":"normal histone exchange at transposon","type":"exact"}],"termid":"FYPO:0007000"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_02408","SJAG_04156","SJAG_03275","SJAG_01126","SJAG_02225","SJAG_00106","SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86471,100911,101059,102203,104476,108541,109807],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0042559"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FOLSYN-PWY","Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: GO:1903203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced neuron death (obsolete GO:1903203)","synonyms":[{"name":"regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"regulation of neuronal cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903203"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: PBO:0069010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 254, pseudogene","termid":"PBO:0069010"}


id: PBO:0087879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator involved in the repression of GAL genes; involved in the repression of GAL genes in the absence of galactose; inhibits transcriptional activation by Gal4p; inhibition relieved by Gal3p or Gal1p binding","termid":"PBO:0087879"}


id: GO:0060259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the behavior associated with the intake of food.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of feeding behavior","synonyms":[{"name":"regulation of feeding behaviour","type":"exact"}],"termid":"GO:0060259"}


id: GO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"chloroplast targeting sequence binding","termid":"GO:0030941"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: PBO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 8","termid":"PBO:0075152"}


id: PBO:0065384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 11","termid":"PBO:0065384"}


id: PBO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 2","termid":"PBO:0046115"}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_02305","SJAG_00413","SJAG_04178","SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[96871,93829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[88927,101664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: GO:2000437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte extravasation","termid":"GO:2000437"}


id: GO:0051763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpene catabolic process","termid":"GO:0051763"}


id: GO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron differentiation","termid":"GO:0045664"}


id: PBO:0038839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 9","termid":"PBO:0038839"}


id: PBO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalytic_activity","termid":"PBO:0031557"}


id: PBO:0061572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 4","termid":"PBO:0061572"}


id: GO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of reactive oxygen species produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced reactive oxygen species (obsolete GO:0052384)","synonyms":[{"name":"evasion by organism of cellular damage caused by symbiont oxidative burst","type":"narrow"},{"name":"evasion or tolerance by organism of reactive oxygen species produced during symbiont defense response","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont metabolic burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont oxidative burst","type":"exact"},{"name":"evasion or tolerance of defense-related symbiont respiratory burst","type":"exact"},{"name":"evasion or tolerance of reactive oxygen species produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of symbiont-produced AOS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROIs","type":"exact"},{"name":"evasion or tolerance of symbiont-produced ROS","type":"exact"},{"name":"evasion or tolerance of symbiont-produced active oxygen species","type":"exact"},{"name":"evasion or tolerance of symbiont-produced reactive oxygen intermediates","type":"exact"}],"termid":"GO:0052384"}


id: PBO:0085623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ER-to-Golgi transport; packaged into COPII vesicles for trafficking between ER and Golgi","termid":"PBO:0085623"}


id: GO:0075173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of MAP kinase-mediated signal transduction in response to host (obsolete GO:0075173)","synonyms":[{"name":"negative regulation of symbiont MAP kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075173"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: PBO:0028831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_absent_from_cell","termid":"PBO:0028831"}


id: GO:0150146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell junction into its constituent components.","definition_xrefs":["GOC:aruk","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction disassembly","termid":"GO:0150146"}


id: PBO:0076312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2 binding protein","termid":"PBO:0076312"}


id: FYPO:0001295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal palmitoyl-CoA ligase activity","synonyms":[{"name":"normal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001295"}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: PBO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10 (predicted)","termid":"PBO:0011968"}


id: GO:0038140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptors ERBB4 (also called HER4) and ERBB3 (also called HER3). ERBB3 has impaired kinase activity so relies on the kinase activity of its heterodimer partner for activation and signal transmission.","definition_xrefs":["PMID:16460914","Reactome:R-HSA-1977955","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ERBB4-ERBB3 complex","synonyms":[{"name":"ERBB3-ERBB4 complex","type":"exact"},{"name":"ERBB4:ERBB3 heterodimer","type":"exact"}],"termid":"GO:0038140"}


id: GO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation (obsolete GO:0031065)","synonyms":[{"name":"activation of histone deacetylation","type":"narrow"},{"name":"stimulation of histone deacetylation","type":"narrow"},{"name":"up regulation of histone deacetylation","type":"exact"},{"name":"up-regulation of histone deacetylation","type":"exact"},{"name":"upregulation of histone deacetylation","type":"exact"}],"termid":"GO:0031065"}


id: PBO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_duplication","termid":"PBO:0030416"}


id: GO:0030738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tyramine = N-methyltyramine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.27","RHEA:14865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tyramine N-methyltransferase activity","secondary_identifiers":["MetaCyc:TYRAMINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02384"],"synonyms":[{"name":"DIB O-methyltransferase (3,5-diiodo-4-hydroxy-benzoic acid)","type":"related"},{"name":"S-adenosyl-L-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"tyramine methylpherase activity","type":"related"}],"termid":"GO:0030738"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: PBO:0047700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formation of mitochondrial complex V assembly factor 1 homolog","termid":"PBO:0047700"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: FYPO:0000568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal shmoo directionality","termid":"FYPO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"abnormal shmoo formation","synonyms":[{"name":"abnormal conjugation tube formation","type":"exact"},{"name":"abnormal mating projection assembly","type":"exact"},{"name":"abnormal mating projection formation","type":"exact"},{"name":"abnormal shmoo assembly","type":"exact"},{"name":"shmoo formation: abnormal","type":"related"}],"termid":"FYPO:0000568"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: FYPO:0004447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the prospore membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to prospore membrane","synonyms":[{"name":"protein mislocalised to prospore membrane","type":"exact"},{"name":"protein mislocalized to forespore membrane","type":"exact"}],"termid":"FYPO:0004447"}


id: GO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["PMID:10219233","GOC:jid","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"is_a","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0065003","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle","synonyms":[{"name":"clathrin coating of Golgi-derived vesicle","type":"exact"}],"termid":"GO:0048202"}


id: GO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a temperature stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception of pain","synonyms":[{"name":"perception of pain, detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"sensory perception of pain, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception of pain, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"thermal nociception","type":"related"}],"termid":"GO:0050965"}


id: PBO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0000496"}


id: PBO:0079083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon ATA) 1-1","termid":"PBO:0079083"}


id: MOD:00301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylglucosamine-1-phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0296","Unimod:428","PubMed:6438439","PubMed:6993483","PubMed:8631906","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"glycosylphosphorylated residue","termid":"MOD:01804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[([(2-acetamido-2-deoxy-alpha-D-glucopyranosyl)oxy][hydroxy]phosphoryl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAcP) serine","type":"exact"},{"name":"N-acetylglucosamine-1-phosphoryl","type":"related"},{"name":"O-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O-GlcNAc-1-phosphorylation (of Serine)","type":"exact"},{"name":"O-beta(N-acetyl-glucosamine-alpha1-phosphate)serine","type":"exact"},{"name":"O3-(N-acetylglucosamine-1-phosphoryl)-L-serine","type":"exact"},{"name":"O3-L-serine 2-(acetylamino)-2-deoxy-D-glucopyranose 1-phosphodiester","type":"exact"},{"name":"PhosphoHexNAc","type":"related"}],"termid":"MOD:00301"}


id: GO:0106190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to a decarboxylation reaction (obsolete GO:0106190)","secondary_identifiers":["EC:7.1.4.-"],"termid":"GO:0106190"}


id: PBO:0053409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 345","termid":"PBO:0053409"}


id: PATO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aliform","synonyms":[{"name":"wing-shaped","type":"exact"}],"termid":"PATO:0002236"}


id: PBO:0090816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","termid":"PBO:0090816"}


id: PBO:0040128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 14","termid":"PBO:0040128"}


id: PBO:0005458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2 (predicted)","termid":"PBO:0005458"}


id: PBO:0110371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRA6 antisense RNA 1","termid":"PBO:0110371"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: PBO:0040747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 2","termid":"PBO:0040747"}


id: PBO:0063026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 6","termid":"PBO:0063026"}


id: GO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["PMID:10781072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"negative regulation of membrane permeability","termid":"GO:1905709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006810","GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane permeability","synonyms":[{"name":"mitochondrial membrane impermeability","type":"related"},{"name":"mitochondrial membrane impermeabilization","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0035795"}


id: GO:0106372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + primary fluorescent dioxobilin-type chlorophyll catabolite = H+ + methanol + O13(4)-desmethyl pFCC.","definition_xrefs":["RHEA:67176","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"primary fluorescent dioxobilin-type chlorophyll catabolite methylesterase activity","termid":"GO:0106372"}


id: PR:O42852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.15c","synonyms":[{"name":"Spom972h-sec20","type":"exact"}],"termid":"PR:O42852"}


id: GO:0110077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in extracellular vesicles between cells; transported substances are enclosed in the vesicle lumen or located in the extracellular vesicle membrane.","definition_xrefs":["GOC:sp","PMID:29328915","PMID:29328916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"vesicle-mediated intercellular transport","synonyms":[{"name":"endosomal trafficking","type":"related"}],"termid":"GO:0110077"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: PBO:0083676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in turnover of plasma membrane proteins; member of the DUP380 subfamily of conserved, often subtelomeric COS genes; required for the multivesicular vesicle body sorting pathway that internalizes plasma membrane proteins for degradation; Cos proteins provide ubiquitin in trans for nonubiquitinated cargo proteins","termid":"PBO:0083676"}


id: PBO:0057766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2110","termid":"PBO:0057766"}


id: GO:1990402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the liver over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic liver development","termid":"GO:1990402"}


id: PBO:0012889
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quant_gene_ex_cell_distribution","termid":"PBO:0012889"}


id: GO:1902233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["PMID:22080863","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation in thymus","termid":"GO:0033085"},{"relation_name":"is_a","term_name":"regulation of positive thymic T cell selection","termid":"GO:1902232"},{"relation_name":"negatively_regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of positive thymic T cell selection","synonyms":[{"name":"down regulation of positive thymic T cell selection","type":"exact"},{"name":"down regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down regulation of positive thymic T-cell selection","type":"exact"},{"name":"down regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T cell selection","type":"exact"},{"name":"down-regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T-cell selection","type":"exact"},{"name":"down-regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T cell selection","type":"exact"},{"name":"downregulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T-cell selection","type":"exact"},{"name":"downregulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"inhibition of positive thymic T cell selection","type":"narrow"},{"name":"inhibition of positive thymic T lymphocyte selection","type":"narrow"},{"name":"inhibition of positive thymic T-cell selection","type":"narrow"},{"name":"inhibition of positive thymic T-lymphocyte selection","type":"narrow"},{"name":"negative regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"negative regulation of positive thymic T-cell selection","type":"exact"},{"name":"negative regulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902233"}


id: GO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nucleic acid via hydrogen bonds between the bases of a gene product molecule and the bases of a target DNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"},{"relation_name":"is_a","term_name":"molecular template activity","termid":"GO:0140489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA template activity","synonyms":[{"name":"base pairing with DNA","type":"related"}],"termid":"GO:0000497"}


id: PR:Q9P372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle 14 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12013:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit srp14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.09","secondary_identifiers":["UniProtKB:Q9P372"],"synonyms":[{"name":"SPAC19B12.09","type":"related"},{"name":"Spom972h-SRP14","type":"exact"},{"name":"signal recognition particle 14 kDa protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P372"}


id: FYPO:0006756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is increased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:28934464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"increased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"increased chromatin binding at promoter element during glucose deprivation","type":"related"}],"termid":"FYPO:0006756"}


id: PBO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 4","termid":"PBO:0046602"}


id: PBO:0078435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-5","termid":"PBO:0078435"}


id: GO:0016581
data:
  {"annotated_genes":["SJAG_00934","SJAG_03844","SJAG_02778","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104291,108231,109417,88216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins.","definition_xrefs":["PMID:11743021","PMID:17289569","PMID:10589671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"CHD-type complex","termid":"GO:0090545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005654","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NuRD complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mi-2 complex","type":"narrow"},{"name":"NRD complex","type":"exact"},{"name":"nucleosome remodeling and histone deacetylation complex","type":"exact"}],"termid":"GO:0016581","terms_by_termid":{"GO:0070824":null}}


id: GO:0034909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxypseudooxynicotine + H2O + OH- = 6-hydroxy-3-succinoylpyridine + 4 H+ + 4 e- + methylamine.","definition_xrefs":["UM-BBD_reactionID:r1441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-hydroxypseudooxynicotine dehydrogenase activity","secondary_identifiers":["EC:1.5.99.14","RHEA:34223"],"termid":"GO:0034909"}


id: PBO:0083051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol acyltransferase; catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor; Lro1p and Dga1p can O-acylate ceramides; localized to lipid particles","termid":"PBO:0083051"}


id: PBO:0091568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly protein","termid":"PBO:0091568"}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: GO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"arginine binding","synonyms":[{"name":"Arg binding","type":"exact"},{"name":"aminopentanoic acid binding","type":"related"}],"termid":"GO:0034618"}


id: PBO:0053670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 851","termid":"PBO:0053670"}


id: GO:0033145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"positively_regulates","term_name":"intracellular steroid hormone receptor signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"positive regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033145"}


id: PBO:0053252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 5","termid":"PBO:0053252"}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01857","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: FYPO:0006859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA replication is decreased in telomeric regions.","definition_xrefs":["PomBase:mah","PMID:30796050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased mitotic DNA replication at telomere","synonyms":[{"name":"decreased DNA replication at telomere during mitotic cell cycle","type":"related"},{"name":"decreased mitotic DNA replication at telomere during vegetative growth","type":"exact"},{"name":"reduced mitotic DNA replication at telomere","type":"exact"}],"termid":"FYPO:0006859"}


id: PBO:0034386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_dendrite_location","termid":"PBO:0034386"}


id: PBO:0064515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 2","termid":"PBO:0064515"}


id: GO:1904740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A transcription from RNA polymerase II promoter that results in positive regulation of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["PMID:26448198","GO_REF:0000063","GOC:rn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:1904740)","synonyms":[{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by RNA polymerase II transcription factor activity","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by general transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from Pol II promoter","type":"exact"}],"termid":"GO:1904740"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: GO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose that occur in the presence of oxygen.","definition_xrefs":["GOC:al","PMID:10082789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose catabolic process","termid":"GO:0034484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"aerobic raffinose catabolic process","synonyms":[{"name":"aerobic raffinose breakdown","type":"exact"},{"name":"aerobic raffinose catabolism","type":"exact"},{"name":"aerobic raffinose degradation","type":"exact"}],"termid":"GO:0036259"}


id: GO:0046230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine catabolic process","termid":"GO:0009310"},{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"2-aminobenzenesulfonate metabolic process","termid":"GO:0018868"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"2-aminobenzenesulfonate catabolic process","synonyms":[{"name":"2-aminobenzenesulfonate breakdown","type":"exact"},{"name":"2-aminobenzenesulfonate catabolism","type":"exact"},{"name":"2-aminobenzenesulfonate degradation","type":"exact"},{"name":"2-aminobenzenesulphonate catabolic process","type":"exact"},{"name":"2-aminobenzenesulphonate catabolism","type":"exact"}],"termid":"GO:0046230"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: GO:0019668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.","definition_xrefs":["PMID:13140081","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic catabolism of pairs of amino acids","synonyms":[{"name":"Stickland reaction","type":"narrow"},{"name":"cofermentation of pairs of amino acids","type":"exact"}],"termid":"GO:0019668"}


id: GO:0110055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:15743909","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament annealing","termid":"GO:0110054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"negative regulation of actin filament annealing","termid":"GO:0110055"}


id: PBO:0045120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1","termid":"PBO:0045120"}


id: FYPO:0000010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells fail to adhere to a substrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell-substrate adhesion","synonyms":[{"name":"abolished cell-substrate adhesion during mitotic cell cycle","type":"related"},{"name":"cell-substrate adhesion abolished","type":"exact"},{"name":"cell-substrate adhesion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000010"}


id: PR:Q9P7F5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1142.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.09","synonyms":[{"name":"Spom972h-SPAC1142.09","type":"exact"}],"termid":"PR:Q9P7F5"}


id: PBO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase (predicted)","termid":"PBO:0002028"}


id: GO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbonyl sulfide + 2 H+ + 2 e- = hydrogen sulfide + carbon monoxide.","definition_xrefs":["UM-BBD_reactionID:r0600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","termid":"GO:0016732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carbonyl sulfide nitrogenase activity","secondary_identifiers":["EC:1.18.6.1"],"synonyms":[{"name":"carbonyl sulphide nitrogenase activity","type":"exact"}],"termid":"GO:0018697"}


id: PBO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraganglioma","termid":"PBO:0002592"}


id: PR:O14325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear valosin-containing protein-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03059","PANTHER:PTHR23077:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C16E9.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.10c","secondary_identifiers":["UniProtKB:O14325"],"synonyms":[{"name":"Spom972h-NVL","type":"exact"}],"termid":"PR:O14325"}


id: GO:0015977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon fixation","secondary_identifiers":["Wikipedia:Carbon_fixation"],"synonyms":[{"name":"autotrophic CO2 fixation","type":"exact"},{"name":"autotrophic CO2 fixation pathway","type":"exact"},{"name":"autotrophy","type":"exact"},{"name":"carbon dioxide fixation","type":"narrow"}],"termid":"GO:0015977"}


id: PBO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 3","termid":"PBO:0061434"}


id: PBO:0060523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0060523"}


id: PR:Q9HDV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.01 gene.","definition_xrefs":["UniProtKB:Q9HDV2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease PB2B2.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.01","synonyms":[{"name":"Spom972h-SPBPB2B2.01","type":"exact"}],"termid":"PR:Q9HDV2"}


id: GO:0032551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine ribonucleoside, a compound consisting of a pyrimidine base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside binding","termid":"GO:0001884"},{"relation_name":"is_a","term_name":"ribonucleoside binding","termid":"GO:0032549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine ribonucleoside binding","termid":"GO:0032551"}


id: PBO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein (predicted)","termid":"PBO:0005817"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: PBO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1B","termid":"PBO:0042893"}


id: GO:0106014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response to wounding.","definition_xrefs":["GOC:BHF_miRNA","PMID:26022821","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to wounding","termid":"GO:0106014"}


id: GO:0033436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AUG codon-amino acid adaptor activity","synonyms":[{"name":"ATG codon-amino acid adaptor activity","type":"exact"},{"name":"initiator methionine tRNA","type":"related"},{"name":"methionine tRNA","type":"related"}],"termid":"GO:0033436"}


id: PBO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 3","termid":"PBO:0051801"}


id: PBO:0057242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 433","termid":"PBO:0057242"}


id: PBO:0061592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 3","termid":"PBO:0061592"}


id: PBO:0061764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine aminotransferase pseudogene 1","termid":"PBO:0061764"}


id: GO:0016412
data:
  {"annotated_genes":["SJAG_05413","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98021,87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on the serine molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04305":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"serine O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.30"],"termid":"GO:0016412","terms_by_termid":{"GO:0009001":null}}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: PBO:0005872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Lysine, mitochondrial","termid":"PBO:0005872"}


id: GO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of NK cell mediated cell death","type":"exact"},{"name":"negative regulation of NK cell mediated cell killing","type":"exact"},{"name":"negative regulation of NK cell mediated cytolysis","type":"related"},{"name":"negative regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell death","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"negative regulation of natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0045953"}


id: GO:1900209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of cardiolipin metabolic process","synonyms":[{"name":"down regulation of cardiolipin metabolic process","type":"exact"},{"name":"down regulation of cardiolipin metabolism","type":"exact"},{"name":"down regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"down-regulation of cardiolipin metabolic process","type":"exact"},{"name":"down-regulation of cardiolipin metabolism","type":"exact"},{"name":"down-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"downregulation of cardiolipin metabolic process","type":"exact"},{"name":"downregulation of cardiolipin metabolism","type":"exact"},{"name":"downregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"downregulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"inhibition of cardiolipin metabolic process","type":"narrow"},{"name":"inhibition of cardiolipin metabolism","type":"exact"},{"name":"inhibition of diphosphatidylglycerol metabolic process","type":"related"},{"name":"inhibition of diphosphatidylglycerol metabolism","type":"related"},{"name":"negative regulation of cardiolipin metabolism","type":"exact"},{"name":"negative regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"negative regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900209"}


id: MOD:00118
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-histidine residue by a thioether bond to form 2'-(S-L-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:6210696","DeltaMass:0","RESID:AA0109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-L-histidine","synonyms":[{"name":"(2R)-2-amino-3-[(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-2-yl)sulfanyl]propanoic acid","type":"exact"},{"name":"(2S)-2-amino-3-[2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"2'-(L-cystein-S-yl)-L-histidine","type":"exact"},{"name":"CROSSLNK 2'-(S-cysteinyl)-histidine (Cys-His)","type":"exact"},{"name":"S-(2'-histidyl)cysteine","type":"exact"},{"name":"S-(2-histidyl)- (crosslinked to cysteine)","type":"exact"},{"name":"XLNK-SCys-2'His","type":"exact"}],"termid":"MOD:00118"}


id: PBO:0049138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 2","termid":"PBO:0049138"}


id: GO:0055129
data:
  {"annotated_genes":["SJAG_00120","SJAG_00495","SJAG_03457","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87044,96284,97909,102900],"is_not":false,"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-proline, an L-enantiomer of a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline biosynthetic process","termid":"GO:0006561"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-proline biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrrolidine-2-carboxylic acid biosynthetic process","type":"broad"}],"termid":"GO:0055129","terms_by_termid":{"GO:0055129":null}}


id: SO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uridine_5_oxyacetic_acid is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine_five_oxyacetic_acid","secondary_identifiers":["RNAMOD:064"],"synonyms":[{"name":"cmo5U","type":"exact"},{"name":"uridine 5-oxyacetic acid","type":"exact"},{"name":"uridine five oxyacetic acid","type":"exact"}],"termid":"SO:0001356"}


id: PBO:0063721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor","termid":"PBO:0063721"}


id: PBO:0051911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha X","termid":"PBO:0051911"}


id: PBO:0067245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 318, pseudogene","termid":"PBO:0067245"}


id: GO:0046912
data:
  {"annotated_genes":["SJAG_01922","SJAG_04499","SJAG_04688","SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003852"},{"annotations":[95589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"},{"annotations":[98057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004410"},{"annotations":[94182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity","termid":"GO:0016746"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_02841":null,"SJAG_04499":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"acyltransferase activity, acyl groups converted into alkyl on transfer","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.-"],"synonyms":[{"name":"acyltransferase, acyl groups converted into alkyl on transfer","type":"exact"},{"name":"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer","type":"exact"}],"termid":"GO:0046912","terms_by_termid":{"GO:0003852":null,"GO:0004108":null,"GO:0004410":null,"GO:0004421":null}}


id: GO:0061246
data:
  {"annotated_genes":["SJAG_04461","SJAG_00845","SJAG_02022","SJAG_00236","SJAG_03581","SJAG_01799","SJAG_00661","SJAG_03637","SJAG_00333","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100652],"is_not":false,"summary":null,"term":"GO:0061246"},{"annotations":[89883,99832,96297,101476],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[114854,100656,90719,91806,109180,96300,101479,87292],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns that regulates the shaping of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061246","terms_by_termid":{"GO:0061246":null,"GO:2000100":null,"GO:2000247":null}}


id: GO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate determination","synonyms":[{"name":"oocyte cell fate determination","type":"exact"}],"termid":"GO:0030716"}


id: PBO:0055193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2617","termid":"PBO:0055193"}


id: GO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Internalization of the anterior midgut into the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut invagination","termid":"GO:0007375"}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: PBO:0090072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase Npt1","termid":"PBO:0090072"}


id: PBO:0038501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 10","termid":"PBO:0038501"}


id: FYPO:0005797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which microtubule bundles are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"short microtubule bundle","synonyms":[{"name":"decreased microtubule bundle length","type":"exact"},{"name":"short MT bundles","type":"exact"},{"name":"short microtubule array","type":"related"}],"termid":"FYPO:0005797"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: FYPO:0001569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular ornithine level","synonyms":[{"name":"increased cellular L-ornithine level","type":"exact"},{"name":"increased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"increased cellular ornithine level during vegetative growth","type":"exact"},{"name":"increased ornithine accumulation","type":"related"}],"termid":"FYPO:0001569"}


id: PBO:0085255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagic vesicle formation; also required for vesicle formation during pexophagy and the cytoplasm-to-vaucole targeting (Cvt) pathway; involved in Atg9p cycling between the phagophore assembly site and mitochondria; contains an APT1 domain that binds phosphatidylinositol-3-phosphate; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085255"}


id: PBO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-OG-Fe(II) oxygenase superfamily protein","termid":"PBO:0002404"}


id: PBO:0051601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 24","termid":"PBO:0051601"}


id: GO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-D-alanine, by either racemization or from peptidyl-L-serine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization","synonyms":[{"name":"alanine racemization","type":"broad"}],"termid":"GO:0019122"}


id: PBO:0031471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nickel","termid":"PBO:0031471"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: GO:0046096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyuridine metabolic process","synonyms":[{"name":"deoxyuridine metabolism","type":"exact"}],"termid":"GO:0046096"}


id: GO:0008193
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113887],"is_not":false,"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.","definition_xrefs":["PMID:1660461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140101","GO:0016740","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"tRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:54564","EC:2.7.7.79"],"termid":"GO:0008193","terms_by_termid":{"GO:0008193":null}}


id: PBO:0076834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: PBO:0079931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase","termid":"PBO:0079931"}


id: PBO:0048704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 1","termid":"PBO:0048704"}


id: GO:0006680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide catabolic process","termid":"GO:0046477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"glucosylceramide catabolic process","synonyms":[{"name":"glucosylceramide breakdown","type":"exact"},{"name":"glucosylceramide catabolism","type":"exact"},{"name":"glucosylceramide degradation","type":"exact"}],"termid":"GO:0006680"}


id: PR:Q9UTR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein red1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.03c","synonyms":[{"name":"RNA elimination defective protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-red1","type":"exact"}],"termid":"PR:Q9UTR8"}


id: GO:0052214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism of substance in other organism involved in symbiotic interaction (obsolete GO:0052214)","synonyms":[{"name":"metabolism of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052214"}


id: PBO:0072290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 8","termid":"PBO:0072290"}


id: PATO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000257 absolute taste_acuity (obsolete PATO:0000257)","termid":"PATO:0000257"}


id: FYPO:0007789
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115352,115353,115362,115384,115385],"is_not":false,"summary":null,"term":"FYPO:0007789"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphal growth does not occur.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"},{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":5,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0007773","FYPO:0001985"],"is_obsolete":false,"name":"abolished hyphal growth","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_00514","SJAG_03453","SJAG_02379","SJAG_02819"],"single_locus_genotype_uniquenames":["efc25delta","scd1delta","gap1delta","ras1delta","scd2delta"],"termid":"FYPO:0007789","terms_by_termid":{"FYPO:0007789":null}}


id: GO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an inner ear receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell fate commitment","synonyms":[{"name":"inner ear hair cell fate commitment","type":"exact"}],"termid":"GO:0060120"}


