# terms

id: FYPO:0000673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal septum assembly","synonyms":[{"name":"normal division septum assembly","type":"exact"},{"name":"normal septation","type":"broad"},{"name":"normal septum assembly during mitotic cell cycle","type":"related"},{"name":"normal septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000673"}


id: PBO:0029810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_abnormal_shape","termid":"PBO:0029810"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11599","RHEA:42904","KEGG_REACTION:R07233"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: GO:0052712
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104951],"is_not":false,"summary":null,"term":"GO:0052712"},{"annotations":[104952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphosphingolipid + H2O = sphingolipid + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052712","terms_by_termid":{"GO:0052712":null,"GO:0052714":null}}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: PBO:0041178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A3, pseudogene","termid":"PBO:0041178"}


id: PBO:0082059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase; catalyzes the formation of HMG-CoA from acetyl-CoA and acetoacetyl-CoA; involved in the second step in mevalonate biosynthesis","termid":"PBO:0082059"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612","SJAG_04406","SJAG_00276","SJAG_01177","SJAG_00339","SJAG_03334","SJAG_00434","SJAG_04325","SJAG_04162","SJAG_04697","SJAG_03452","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[107029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[89476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[89244,89478,108389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[108502,111673,84563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: PBO:0067151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 201, pseudogene","termid":"PBO:0067151"}


id: PBO:0028220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_splicing,_via_spliceosome","termid":"PBO:0028220"}


id: PBO:0068108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 415","termid":"PBO:0068108"}


id: PBO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-40","termid":"PBO:0051350"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: GO:0160023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process that expels air forcibly from the mouth and nose in an explosive, spasmodic involuntary action resulting chiefly from irritation of the nasal mucous membrane.","definition_xrefs":["PMID:34133943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sneeze reflex","synonyms":[{"name":"sternutation","type":"exact"}],"termid":"GO:0160023"}


id: PBO:0078110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor associated transmembrane adaptor 1","termid":"PBO:0078110"}


id: PBO:0090138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES and SAM complex subunit Mdm10","termid":"PBO:0090138"}


id: FYPO:0004394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"lagging chromosomes during meiosis II","synonyms":[{"name":"lagging chromosomes during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004394"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PR:Q9Y7K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC216.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0659 protein C216.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.03","synonyms":[{"name":"Spom972h-SPBC216.03","type":"exact"}],"termid":"PR:Q9Y7K0"}


id: PBO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 3","termid":"PBO:0071345"}


id: PBO:0075836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 4","termid":"PBO:0075836"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260","SJAG_01671","SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[85367,85004,112872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019739","KEGG_REACTION:R00412"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: PATO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000226 tactile response (obsolete PATO:0000226)","termid":"PATO:0000226"}


id: FYPO:0007686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains more nuclear exosome foci than normal.","definition_xrefs":["PMID:33574613","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of nuclear exosome foci","synonyms":[{"name":"increased number of Mmi1 foci","type":"exact"},{"name":"increased number of Mmi1 nuclear foci","type":"exact"}],"termid":"FYPO:0007686"}


id: GO:0032001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer an alpha-D-glucosyl residue in a (1->4)-alpha-D-glucan to the primary hydroxy group of glucose, free or combined in a (1->4)-alpha-D-glucan.","definition_xrefs":["EC:2.4.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1,4-alpha-glucan 6-alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.24-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan(D-glucose) 6-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"D-glucosyltransferase","type":"broad"},{"name":"T-enzyme","type":"narrow"},{"name":"oligoglucan-branching glycosyltransferase activity","type":"related"}],"termid":"GO:0032001"}


id: PBO:0016885
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific","termid":"PBO:0016885"}


id: PBO:0057984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-2","termid":"PBO:0057984"}


id: PBO:0068576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 27, pseudogene","termid":"PBO:0068576"}


id: PBO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on_(obsolete_dependent_on)","termid":"PBO:0034401"}


id: GO:0003846
data:
  {"annotated_genes":["SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110310],"is_not":false,"summary":null,"term":"GO:0003846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol.","definition_xrefs":["PMID:4016575","RHEA:16741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"2-acylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.22","MetaCyc:2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN","Reactome:R-HSA-6800334","Reactome:R-HSA-5696448"],"synonyms":[{"name":"acyl coenzyme A-monoglyceride acyltransferase activity","type":"related"},{"name":"acyl-CoA:2-acylglycerol O-acyltransferase activity","type":"related"},{"name":"acylglycerol palmitoyltransferase activity","type":"related"},{"name":"monoacylglycerol acyltransferase activity","type":"related"},{"name":"monoglyceride acyltransferase activity","type":"related"}],"termid":"GO:0003846","terms_by_termid":{"GO:0003846":null}}


id: GO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which a glutamine stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of glutamine (obsolete GO:0010108)","synonyms":[{"name":"glutamine detection","type":"exact"},{"name":"glutamine perception","type":"related"},{"name":"glutamine sensing","type":"related"}],"termid":"GO:0010108"}


id: GO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the cell parallel to the zygotic axis.","definition_xrefs":["GOC:mtg_sensu","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"longitudinal side of cell surface","termid":"GO:0009930"}


id: PBO:0091426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+)","termid":"PBO:0091426"}


id: PBO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 receptor","termid":"PBO:0046811"}


id: GO:0160165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of CD8-positive alpha-beta T cells such that the total number of CD8-positive alpha-beta T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:33815406","PMID:30650357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell homeostasis","synonyms":[{"name":"CD8+ T cell homeostasis","type":"broad"},{"name":"CD8-positive T cell homeostasis","type":"broad"}],"termid":"GO:0160165"}


id: GO:0052867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol 1,4,5-trisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-1,4,5-trisphosphate 5-phosphatase activity","synonyms":[{"name":"PtdIns(1,4,5)P(3) phosphatase activity","type":"broad"},{"name":"PtdIns(1,4,5)P3 phosphatase activity","type":"broad"},{"name":"phosphatidyl-myo-inositol-1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-trisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0052867"}


id: PBO:0029116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_phase","termid":"PBO:0029116"}


id: PBO:0002885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp3 (predicted)","termid":"PBO:0002885"}


id: PBO:0063601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 13","termid":"PBO:0063601"}


id: PR:000027566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04909-1, Ser-122, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S121)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"Spom-hta1/Phos:2","type":"exact"},{"name":"histone H2A.1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S121)","type":"exact"},{"name":"hta1/Phos:(S122)","type":"exact"}],"termid":"PR:000027566"}


id: PBO:0044911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit beta pseudogene 1","termid":"PBO:0044911"}


id: GO:1903222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which quinolinic acid is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:di","GO_REF:0000069","PMID:23457190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"quinolinic acid transmembrane transport","termid":"GO:1903222"}


id: PBO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst3","termid":"PBO:0001894"}


id: MOD:00723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to either N2-acetyl-L-lysine, or N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated residue","termid":"MOD:00408"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetylated L-lysine","synonyms":[{"name":"NAcLys","type":"exact"}],"termid":"MOD:00723"}


id: PBO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 12","termid":"PBO:0071335"}


id: PBO:0065713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR cell adhesion molecule","termid":"PBO:0065713"}


id: FYPO:0007191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during vegetative growth","synonyms":[{"name":"delayed peak level of Rad52 foci during vegetative growth","type":"related"},{"name":"increased duration of Rad22 focus presence during vegetative growth","type":"exact"},{"name":"increased duration of Rad52 focus presence during mitotic cell cycle","type":"related"},{"name":"increased persistence of Rad52 foci during vegetative growth","type":"exact"},{"name":"prolonged Rad52 focus presence during vegetative growth","type":"exact"}],"termid":"FYPO:0007191"}


id: GO:0102255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: neo-lambda-carrahexaose + H2O = neo-lambda-carratetraose + neo-lambda-carrabiose.","definition_xrefs":["EC:3.2.1.162","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"neo-lambda-carrahexaose hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12428"],"termid":"GO:0102255"}


id: PBO:0068670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 51, pseudogene","termid":"PBO:0068670"}


id: GO:0020006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubular network of extensions from the symbiont-containing vacuole membrane that protrude into the host cytoplasm.","definition_xrefs":["GOC:jl","PMID:3528173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"symbiont-containing vacuolar membrane network","synonyms":[{"name":"parasitophorous vacuolar membrane network","type":"exact"},{"name":"symbiont-containing vacuole membrane network","type":"exact"},{"name":"tubulovesicular network","type":"narrow"}],"termid":"GO:0020006"}


id: PBO:0071267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L24","termid":"PBO:0071267"}


id: PBO:0109123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene","termid":"PBO:0109123"}


id: PBO:0055410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2840","termid":"PBO:0055410"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: PBO:0050487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 2","termid":"PBO:0050487"}


id: GO:0000272
data:
  {"annotated_genes":["SJAG_06309","SJAG_00620","SJAG_03824","SJAG_02478","SJAG_02131","SJAG_02718","SJAG_01017","SJAG_04327","SJAG_01171","SJAG_02649","SJAG_01561","SJAG_01783","SJAG_03646","SJAG_03851","SJAG_00667","SJAG_03295","SJAG_01888","SJAG_03444","SJAG_00115","SJAG_05001","SJAG_02076","SJAG_04963","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83646,92247,92248,104524,111730],"is_not":false,"summary":null,"term":"GO:0000272"},{"annotations":[107439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"},{"annotations":[97636,87912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[115184,85272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[90163,96266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[90165,107441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072000"},{"annotations":[102820,84478,98076,104204,98077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[99433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[86254,105907,93744,94741,96406,104782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_03851":null,"SJAG_04327":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044244"],"synonyms":[{"name":"multicellular organismal polysaccharide catabolic process","type":"narrow"},{"name":"polysaccharide breakdown","type":"exact"},{"name":"polysaccharide catabolism","type":"exact"},{"name":"polysaccharide degradation","type":"exact"}],"termid":"GO:0000272","terms_by_termid":{"GO:0000272":null,"GO:0005980":null,"GO:0009251":null,"GO:0030995":null,"GO:0034232":null,"GO:0044347":null,"GO:0061723":null,"GO:0072000":null,"GO:0072316":null}}


id: PBO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12 (predicted)","termid":"PBO:0001661"}


id: PBO:0072311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 8","termid":"PBO:0072311"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: SO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA_gene","synonyms":[{"name":"C/D scaRNA gene","type":"exact"}],"termid":"SO:0002372"}


id: GO:0050024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactono-1,4-lactone + O2 = L-ascorbate + H2O2 + H+.","definition_xrefs":["EC:1.3.3.12","RHEA:20617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-galactonolactone oxidase activity","secondary_identifiers":["KEGG_REACTION:R00643","GO:0033733","MetaCyc:1.3.3.12-RXN"],"synonyms":[{"name":"L-galactono-1,4-lactone oxidase activity","type":"related"},{"name":"L-galactono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-xylono-1,4-lactone oxidase activity","type":"related"}],"termid":"GO:0050024"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: GO:0048345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of paraxial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of paraxial mesodermal cell fate determination","termid":"GO:0048345"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PBO:0085802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; copurifies with late Golgi vesicles containing the v-SNARE Tlg2p; PTM1 has a paralog, YHL017W, that arose from the whole genome duplication","termid":"PBO:0085802"}


id: GO:0031384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the start of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of initiation of mating projection growth","termid":"GO:0031384"}


id: MOD:00696
data:
  {"annotated_genes":["SJAG_04551","SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115233,115234,115235,115444,115448],"is_not":false,"summary":null,"term":"MOD:00696"},{"annotations":[115507,115508,115166,115509,115510,115165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["DeltaMass:0","Unimod:21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"synonyms":[{"name":"PhosRes","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"Phosphorylation (O of Serine, Threonine, Tyrosine and Aspartate, N epsilon of Lysine)","type":"exact"}],"termid":"MOD:00696","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: GO:0047652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoate + H2O + H+ = CO2 + NH3 + ureidoglycine.","definition_xrefs":["EC:3.5.3.9","MetaCyc:ALLANTOATE-DEIMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"allantoate deiminase activity","secondary_identifiers":["RHEA:27485"],"synonyms":[{"name":"allantoate amidinohydrolase (decarboxylating)","type":"related"},{"name":"allantoate amidohydrolase activity","type":"related"}],"termid":"GO:0047652"}


id: GO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnogalacturonan II, a low molecular mass (5-10KDa) pectic polysaccharide. The backbone of RG-II contains at least 8 1,4-linked alpha-D-GalpA residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnogalacturonan II metabolic process","synonyms":[{"name":"rhamnogalacturonan II metabolism","type":"exact"}],"termid":"GO:0010396"}


id: PBO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase at the interface between RNA polymerase II and chaperone (predicted)","termid":"PBO:0003322"}


id: PBO:0045390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 1","termid":"PBO:0045390"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02802","PANTHER:PTHR22748:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: PBO:0109836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1","termid":"PBO:0109836"}


id: PATO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strain","termid":"PATO:0001034"}


id: PBO:0038837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 4","termid":"PBO:0038837"}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: PBO:0056480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 2","termid":"PBO:0056480"}


id: PBO:0064543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 4, pseudogene","termid":"PBO:0064543"}


id: GO:0090690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two or more different receptor complexes that individually undergo combination with a hormone, neurotransmitter, drug or intracellular messenger. The formation of the higher level complex initiates a change in cell function.","definition_xrefs":["PMID:24157794","PMID:22035699","GOC:PARL","GOC:pad"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex (obsolete GO:0090690)","termid":"GO:0090690"}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: PBO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR26 family, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0001088"}


id: FYPO:0001236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cycloheximide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cycloheximide","synonyms":[{"name":"normal cell population growth in presence of cycloheximide","type":"exact"},{"name":"normal cell population growth on cycloheximide","type":"exact"},{"name":"normal cellular response to cycloheximide","type":"related"},{"name":"normal vegetative cell population growth on cycloheximide","type":"exact"}],"termid":"FYPO:0001236"}


id: PBO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 3","termid":"PBO:0043067"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: MOD:00376
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form 1'-(phospho-5'-adenosine)-L-histidine.","definition_xrefs":["Unimod:405#H","RESID:AA0371","PubMed:15182206","PubMed:9323207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-adenosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-[1-(5'-adenosine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-adenosine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-AMP-histidine intermediate","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-histidine 5'-adenosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(tau)-5'-adenylic-L-histidine","type":"exact"},{"name":"N1'-adenylylated histidine","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"tele-5'-adenylic-L-histidine","type":"exact"}],"termid":"MOD:00376"}


id: PBO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6","termid":"PBO:0036524"}


id: GO:0102986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an NDP-alpha-D-glucose + D-glucopyranose = alpha,alpha-trehalose + H+ + a nucleoside diphosphate.","definition_xrefs":["EC:2.4.1.245","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"trehalose synthase activity","secondary_identifiers":["MetaCyc:RXN-9603","RHEA:47416"],"termid":"GO:0102986"}


id: PBO:0068929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 172, pseudogene","termid":"PBO:0068929"}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: GO:0035513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:12594517","PMID:18775698","PMID:16482161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"oxidative demethylation","termid":"GO:0070989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative RNA demethylation","termid":"GO:0035513"}


id: PBO:0040153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 2","termid":"PBO:0040153"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: PBO:0084737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim8p that delivers a subset of hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0084737"}


id: PBO:0055511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2945","termid":"PBO:0055511"}


id: PBO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.-","termid":"PBO:0000508"}


id: PATO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the extent of space between two entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distance","termid":"PATO:0000040"}


id: FYPO:0002318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular sterol level","termid":"FYPO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular ergosterol level","synonyms":[{"name":"increased cellular ergosterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular ergosterol level during vegetative growth","type":"exact"},{"name":"increased ergosterol accumulation","type":"related"}],"termid":"FYPO:0002318"}


id: FYPO:0003140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003140)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003140"}


id: GO:0090431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivatives of alkyl caffeate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"cinnamic acid ester biosynthetic process","termid":"GO:0009802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alkyl caffeate ester biosynthetic process","synonyms":[{"name":"alkyl caffeate ester anabolism","type":"exact"},{"name":"alkyl caffeate ester biosynthesis","type":"exact"},{"name":"alkyl caffeate ester formation","type":"exact"},{"name":"alkyl caffeate ester synthesis","type":"exact"}],"termid":"GO:0090431"}


id: GO:1990095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["PMID:16166371","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (obsolete GO:1990095)","termid":"GO:1990095"}


id: PBO:0066207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22","termid":"PBO:0066207"}


id: PATO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral orientation","synonyms":[{"name":"ventrally directed","type":"exact"}],"termid":"PATO:0002501"}


id: PBO:0044134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal binding protein 2","termid":"PBO:0044134"}


id: PBO:0036061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_eMTOC_during_vegetative_growth","termid":"PBO:0036061"}


id: PBO:0078159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 37 (pseudogene)","termid":"PBO:0078159"}


id: PBO:0057199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 371b","termid":"PBO:0057199"}


id: PBO:0045184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5","termid":"PBO:0045184"}


id: PBO:0083064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotate dehydrogenase; catalyzes the fourth enzymatic step in the de novo biosynthesis of pyrimidines, converting dihydroorotic acid into orotic acid","termid":"PBO:0083064"}


id: PBO:0058896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12114","termid":"PBO:0058896"}


id: GO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide metabolic process (obsolete GO:0030799)","synonyms":[{"name":"regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030799"}


id: GO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal DNA","secondary_identifiers":["Wikipedia:Extrachromosomal_DNA"],"termid":"GO:0046821"}


id: PBO:0064015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 49","termid":"PBO:0064015"}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: PBO:0064323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 5","termid":"PBO:0064323"}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: GO:1903219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GOC:sart","GO_REF:0000059","GOC:TermGenie","PMID:12398416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","termid":"GO:1903218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"down regulation of 'malic' enzyme","type":"related"},{"name":"down regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down regulation of NADP-specific malic enzyme","type":"related"},{"name":"down regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"down-regulation of 'malic' enzyme","type":"related"},{"name":"down-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down-regulation of NADP-specific malic enzyme","type":"related"},{"name":"down-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"downregulation of 'malic' enzyme","type":"related"},{"name":"downregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"downregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"downregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"downregulation of NADP-malic enzyme activity","type":"exact"},{"name":"downregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"downregulation of NADP-specific malic enzyme","type":"related"},{"name":"downregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"inhibition of 'malic' enzyme","type":"related"},{"name":"inhibition of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"inhibition of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"inhibition of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"inhibition of NADP-malic enzyme activity","type":"narrow"},{"name":"inhibition of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"inhibition of NADP-specific malic enzyme","type":"related"},{"name":"inhibition of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"negative regulation of 'malic' enzyme","type":"related"},{"name":"negative regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"negative regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"negative regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"negative regulation of NADP-malic enzyme activity","type":"exact"},{"name":"negative regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"negative regulation of NADP-specific malic enzyme","type":"related"},{"name":"negative regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"negative regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903219"}


id: PBO:0004619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-aminobenzoate synthase (predicted)","termid":"PBO:0004619"}


id: SO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that has been edited by A to I substitution.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript","termid":"SO:0000873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_transcript_by_A_to_I_substitution","synonyms":[{"name":"edited transcript by A to I substitution","type":"exact"}],"termid":"SO:0000874"}


id: PBO:0058919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRlet-7a-1/let-7f-1/let-7d cluster host gene","termid":"PBO:0058919"}


id: GO:0006906
data:
  {"annotated_genes":["SJAG_03848","SJAG_00826","SJAG_02315","SJAG_02241","SJAG_03552","SJAG_04739","SJAG_00430","SJAG_03536","SJAG_04513","SJAG_02587","SJAG_00171","SJAG_03347","SJAG_05184","SJAG_03889","SJAG_03670","SJAG_00557","SJAG_01324","SJAG_04023","SJAG_03403","SJAG_00380","SJAG_00204","SJAG_04978","SJAG_01697","SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86744,94239,96021,96337,96974,97207,103519,104818,105797,108810,113599,113638,114610],"is_not":false,"summary":null,"term":"GO:0006906"},{"annotations":[113005,97242,95634,86351,90453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[101832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[91698,113708,104162,105946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with its target membrane.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006906","terms_by_termid":{"GO:0006906":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null}}


id: GO:0034841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mentha-1,3-dione + CoASH = 3,7-dimethyl-5-oxo-octyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mentha-1,3-dione-CoA ligase activity","termid":"GO:0034841"}


id: PBO:0067203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 268, pseudogene","termid":"PBO:0067203"}


id: GO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the alpha3 chain of type VI collagen; the integrin binds most strongly to unfolded collagen.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-collagen alpha3(VI) complex","termid":"GO:0070464"}


id: GO:0038086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A/PDGFR signaling","type":"narrow"},{"name":"VEGF-activated PDGFR signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor signalling pathway","type":"exact"},{"name":"VEGF/PDGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0038086"}


id: PBO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 17","termid":"PBO:0070712"}


id: PBO:0056460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1L pseudogene 1","termid":"PBO:0056460"}


id: PBO:0040514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 1","termid":"PBO:0040514"}


id: PBO:0072585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog B, pseudogene","termid":"PBO:0072585"}


id: PBO:0054355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1748","termid":"PBO:0054355"}


id: GO:0097441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.","definition_xrefs":["NIF_Subcellular:sao1079900774","GOC:aruk","GOC:bc","PMID:17046728","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal dendrite","synonyms":[{"name":"basilar dendrite","type":"exact"}],"termid":"GO:0097441"}


id: GO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate.","definition_xrefs":["MetaCyc:GLYCINE-N-CHOLOYLTRANSFERASE-RXN","EC:2.3.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glycine N-choloyltransferase activity","secondary_identifiers":["RHEA:14001"],"synonyms":[{"name":"BACAT activity","type":"related"},{"name":"BAT activity","type":"related"},{"name":"amino acid N-choloyltransferase activity","type":"related"},{"name":"bile acid-CoA:amino acid N-acyltransferase activity","type":"related"},{"name":"choloyl-CoA:glycine N-choloyltransferase activity","type":"related"},{"name":"cholyl-CoA glycine-taurine N-acyltransferase activity","type":"related"},{"name":"cholyl-CoA:taurine N-acyltransferase activity","type":"related"},{"name":"glycine--taurine N-acyltransferase activity","type":"related"}],"termid":"GO:0047963"}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: PBO:0065468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 9","termid":"PBO:0065468"}


id: GO:1900652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"regulation of demethylkotanin anabolism","type":"exact"},{"name":"regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"regulation of demethylkotanin formation","type":"exact"},{"name":"regulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900652"}


id: PR:Q9P785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C1711.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.05","secondary_identifiers":["UniProtKB:Q9P785"],"synonyms":[{"name":"Spom972h-MUC7","type":"exact"}],"termid":"PR:Q9P785"}


id: PR:O74792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF global transcription activator complex subunit snf59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.09c","synonyms":[{"name":"Spom972h-snf59","type":"exact"}],"termid":"PR:O74792"}


id: GO:0032207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"},{"relation_name":"regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"}


id: PBO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 6","termid":"PBO:0044655"}


id: PBO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2","termid":"PBO:0046344"}


id: PATO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001106 relative strain value (obsolete PATO:0001106)","termid":"PATO:0001106"}


id: GO:2000886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucuronoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoxylan metabolic process","termid":"GO:0010413"},{"relation_name":"is_a","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"glucuronoxylan catabolic process","synonyms":[{"name":"glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000886"}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: PBO:0060230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 2","termid":"PBO:0060230"}


id: PBO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 21","termid":"PBO:0060001"}


id: MOD:01703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydrobutyrine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dHAbu","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:01703"}


id: PR:O60152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03435","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.02","secondary_identifiers":["UniProtKB:O60152"],"synonyms":[{"name":"N-end-recognizing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBR2","type":"exact"}],"termid":"PR:O60152"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: GO:0048013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by ephrin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ephrin receptor signaling pathway","synonyms":[{"name":"Eph receptor signaling pathway","type":"exact"},{"name":"Eph receptor signalling pathway","type":"exact"}],"termid":"GO:0048013"}


id: GO:0014738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hyperplasia","termid":"GO:0014738"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: PBO:0045054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2","termid":"PBO:0045054"}


id: FYPO:0002187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable normal volume spheroid vegetative cell","synonyms":[{"name":"inviable normal volume rounded vegetative cell","type":"exact"},{"name":"inviable normal volume spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002187"}


id: PBO:0079065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 1-1","termid":"PBO:0079065"}


id: PR:O94483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad5 gene.","definition_xrefs":["UniProtKB:O94483","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high osmolarity sensitivity protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.02","synonyms":[{"name":"Spom972h-dad5","type":"exact"}],"termid":"PR:O94483"}


id: PR:Q2HQL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.14c gene.","definition_xrefs":["UniProtKB:Q2HQL6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1347.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.14c","synonyms":[{"name":"Spom972h-SPBC1347.14c","type":"exact"}],"termid":"PR:Q2HQL6"}


id: PBO:0040716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7B","termid":"PBO:0040716"}


id: PBO:0002938
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Uncontrolled Mitosis","termid":"PBO:0002938"}


id: FYPO:0006767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PMID:10521402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"increased cyclin-dependent protein kinase activity with abolished meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006767"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"reduced cellular histidine level","type":"exact"},{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"}],"termid":"FYPO:0001562"}


id: PBO:0085708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in silencing at mating-type loci HML and HMR; recruitment to silent chromatin requires interactions with Orc1p and with Sir4p, through a common Sir1p domain; binds to centromeric chromatin","termid":"PBO:0085708"}


id: PBO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,4-glucan synthase, meiotic Mok14","termid":"PBO:0090588"}


id: GO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains ribosomal RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete rRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071428)","synonyms":[{"name":"rRNA-containing RNP export from nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"rRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071428"}


id: PBO:0056744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL1 pseudogene 1","termid":"PBO:0056744"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: PR:O13807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA damage-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10644:SF3","OMA:SCHPO00829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.10c","secondary_identifiers":["UniProtKB:O13807"],"synonyms":[{"name":"Spom972h-DDB1","type":"exact"},{"name":"damage-specific DNA-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13807"}


id: PBO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0033804"}


id: PBO:0041738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathelicidin antimicrobial peptide","termid":"PBO:0041738"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["RHEA:61836","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 3-beta-glucosyltransferase activity","termid":"GO:0016906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ergosterol UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-16975"],"termid":"GO:0051506"}


id: PBO:0044138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 4","termid":"PBO:0044138"}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_01640","SJAG_02208","SJAG_03358","SJAG_02330","SJAG_00175","SJAG_01597","SJAG_03415","SJAG_03515","SJAG_00959","SJAG_00373","SJAG_01879","SJAG_05259","SJAG_03502","SJAG_04996","SJAG_02077","SJAG_03560","SJAG_04218"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105770,94194,102293,105476,102298,95556,103426,111344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[95667,99415,93027,87059,96445,103727,107930,103705,101306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: FYPO:0007444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which macroautophagy is normal (i.e. indistinguishable from wild type) during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"normal macroautophagy during cellular response to ER stress","type":"exact"},{"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"normal macroautophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0007444"}


id: GO:1902141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to inositol","termid":"GO:1902140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to inositol","termid":"GO:1902141"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: PBO:0079549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 2","termid":"PBO:0079549"}


id: SO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To translocate a subsection of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000049 translocate (obsolete SO:0000049)","termid":"SO:0000049"}


id: GO:0021524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of visceral motor neurons. Visceral motor neurons innervate glandular targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral motor neuron differentiation","termid":"GO:0021524"}


id: PBO:0059957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 2","termid":"PBO:0059957"}


id: GO:1904559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dextromethorphan stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:mr","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"},{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"response to dextromethorphan","termid":"GO:1904558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dextromethorphan","termid":"GO:1904559"}


id: PBO:0061861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 2","termid":"PBO:0061861"}


id: FYPO:0005763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal, including at sites where forks do not normally pause.","definition_xrefs":["PomBase:mah","PMID:25471935","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork pausing","synonyms":[{"name":"increased replication fork pausing during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing during vegetative growth","type":"exact"}],"termid":"FYPO:0005763"}


id: PBO:0051768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 11","termid":"PBO:0051768"}


id: PBO:0055463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2896","termid":"PBO:0055463"}


id: GO:1990315
data:
  {"annotated_genes":["SJAG_03384","SJAG_00027","SJAG_04777","SJAG_03828","SJAG_02342","SJAG_06622","SJAG_00318","SJAG_06621","SJAG_02135","SJAG_03903","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83738,97024,105052,105053,105054,105055,105056,105057,105058,106472,108606],"is_not":false,"summary":null,"term":"GO:1990315"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of a phospho relay component and a MAPK cascade component. The complex is involved in signaling oxidative stress and osmostress.","definition_xrefs":["PMID:24255738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_02135":null,"SJAG_02342":null,"SJAG_02945":null,"SJAG_03384":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04777":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Mcs4 RR-MAPKKK complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990315","terms_by_termid":{"GO:1990315":null}}


id: PBO:0050616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2","termid":"PBO:0050616"}


id: FYPO:0000741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigment accumulation phenotype","termid":"FYPO:0000739"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular pigment accumulation","synonyms":[{"name":"abnormal cellular pigment accumulation","type":"exact"},{"name":"altered colony color","type":"related"},{"name":"altered colony colour","type":"related"},{"name":"increased cellular pigment accumulation during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000741"}


id: GO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 = cholest-5-en-3-one + H2O2.","definition_xrefs":["RHEA:32183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol oxidase activity","secondary_identifiers":["EC:1.1.3.6","KEGG_REACTION:R01459","MetaCyc:CHOLESTEROL-OXIDASE-RXN"],"synonyms":[{"name":"3beta-hydroxy steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid:oxygen oxidoreductase activity","type":"related"},{"name":"cholesterol- O2 oxidoreductase activity","type":"related"},{"name":"cholesterol-O2 oxidoreductase activity","type":"related"},{"name":"cholesterol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016995"}


id: GO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation involved in immune response","synonyms":[{"name":"gamma-delta T cell proliferation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte proliferation during immune response","type":"related"},{"name":"gamma-delta T-cell proliferation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002311"}


id: GO:0051794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of catagen","synonyms":[{"name":"regulation of catagen","type":"related"}],"termid":"GO:0051794"}


id: PBO:0005739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component scaffold protein, centriolin ortholog Cdc11","termid":"PBO:0005739"}


id: GO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a cytosine residue in DNA, forming a uracil residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA deamination","termid":"GO:0045006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA cytosine deamination","termid":"GO:0070383"}


id: PBO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylaminoacyl-peptide hydrolase","termid":"PBO:0039693"}


id: GO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460.","definition_xrefs":["RESID:AA0266","RESID:AA0271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein-heme P460 linkage","synonyms":[{"name":"protein-haem P460 linkage","type":"exact"}],"termid":"GO:0018174"}


id: GO:2000430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte cell-cell adhesion","termid":"GO:1903039"},{"relation_name":"is_a","term_name":"regulation of neutrophil aggregation","termid":"GO:2000428"},{"relation_name":"positively_regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of neutrophil aggregation","synonyms":[{"name":"positive regulation of neutrocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"positive regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000430"}


id: PBO:0087546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; cooperates with Tfc3p in DNA binding; human homolog is TFIIIC-110","termid":"PBO:0087546"}


id: PR:Q09188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP,ATP carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.10c","synonyms":[{"name":"ADP/ATP translocase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ANT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anc1","type":"exact"},{"name":"adenine nucleotide translocator (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09188"}


id: GO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["GOC:jl","PMID:19158310","PMID:1961743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"chromaffin granule","termid":"GO:0042583"}


id: PR:O94436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.02","synonyms":[{"name":"SWI/SNF chromatin-remodeling complex subunit tfg3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit tfg3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfg3","type":"exact"},{"name":"TBP-associated factor 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 30 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor G 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIIF 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94436"}


id: GO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: PBO:0062798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 3","termid":"PBO:0062798"}


id: PR:O14144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD-linked sulfhydryl oxidase erv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.08","synonyms":[{"name":"Spom972h-erv1","type":"exact"}],"termid":"PR:O14144"}


id: PBO:0082650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu1, and promotes error-free DNA repair, Shu complex mediates inhibition of Srs2p function; promotes formation of Rad51p filaments; important for both mitotic and meiotic homologous recombination, and contains a conserved SWIM domain that is necessary for both","termid":"PBO:0082650"}


id: PBO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 5","termid":"PBO:0047539"}


id: FYPO:0001418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001418"}


id: PBO:0082549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of GID Complex, involved in FBPase degradation; interacts strongly with Gid8p to serve as a scaffold for other GID Complex subunits; contains SPRY domain and 3 domains that are also found in Gid8p - LisH, CTLH, and CRA; required for association of Vid vesicles and actin patches in vacuole import and degradation pathway; shifts the balance of nitrogen metabolism toward glutamate production; localizes to the nucleus and the cytoplasm","termid":"PBO:0082549"}


id: FYPO:0007279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to euchromatin is increased.","definition_xrefs":["PMID:17289569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to euchromatin","synonyms":[{"name":"increased protein localisation to euchromatin","type":"exact"},{"name":"increased protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"increased protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007279"}


id: PBO:0039473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18C, pseudogene","termid":"PBO:0039473"}


id: PBO:0031887
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RFC3","termid":"PBO:0031887"}


id: PBO:0069930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1223, pseudogene","termid":"PBO:0069930"}


id: PBO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 2","termid":"PBO:0045678"}


id: PBO:0038474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 12","termid":"PBO:0038474"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: GO:0008674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-2-dehydro-3-deoxy-D-galactonate = D-glyceraldehyde 3-phosphate + pyruvate.","definition_xrefs":["EC:4.1.2.21","RHEA:24464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity","secondary_identifiers":["MetaCyc:DEHYDDEOXPHOSGALACT-ALDOL-RXN","KEGG_REACTION:R01064"],"synonyms":[{"name":"(KDPGal)aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphogalactonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-6-phosphogalactonic acid aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogalactonic aldolase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate 6-phosphate aldolase activity","type":"related"},{"name":"6-phospho-2-dehydro-3-deoxygalactonate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonic aldolase activity","type":"related"}],"termid":"GO:0008674"}


id: GO:0031734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR9 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR9 chemokine receptor binding","synonyms":[{"name":"CCR9 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031734"}


id: PBO:0030405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Glc1Man9GlcNAc_level","termid":"PBO:0030405"}


id: PBO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal protein pseudogene 2","termid":"PBO:0043240"}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: PBO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2263","termid":"PBO:0054849"}


id: PBO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1B","termid":"PBO:0044639"}


id: PBO:0086327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to P-type ATPase sodium pumps; member of the Na+ efflux ATPase family","termid":"PBO:0086327"}


id: PBO:0003234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19 (predicted)","termid":"PBO:0003234"}


id: SO:1000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal mutation. Rearrangements that alter the pairing of telomeres are classified as translocations.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_translocation","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_translocation"],"synonyms":[{"name":"(Drosophila)T","type":"related"},{"name":"(fungi)T","type":"related"},{"name":"chromosomal translocation","type":"exact"}],"termid":"SO:1000044"}


id: GO:1903924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to estradiol.","definition_xrefs":["GOC:TermGenie","PMID:9048584","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"estradiol binding","termid":"GO:1903924"}


id: PBO:0054133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1499","termid":"PBO:0054133"}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044866"},{"relation_name":"is_a","term_name":"negative regulation by host of symbiont catalytic activity","termid":"GO:0052403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044869"}


id: FYPO:0004257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus and has a larger volume than normal.","definition_xrefs":["PomBase:mah","PMID:10503548"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"swollen multinucleate vegetative cell","synonyms":[{"name":"enlarged multinucleate cell","type":"related"},{"name":"large multinucleate cell","type":"related"},{"name":"multinucleate cell with increased cell size","type":"related"},{"name":"multinucleate cell with increased cell volume","type":"exact"},{"name":"swollen multinucleate cell during vegetative growth","type":"exact"},{"name":"swollen multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004257"}


id: PBO:0085114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleocytoplasmic shuttling assembly chaperone; co-translationally associates with nascent Rps3p in the cytoplasm and delivers it to pre-ribosomal subunits in the nucleus; required for 40S ribosomal subunit nuclear export, biogenesis and adaptation to osmotic and oxidative stress;  contains ankyrin-repeats; expression repressed by heat shock","termid":"PBO:0085114"}


id: GO:0004252
data:
  {"annotated_genes":["SJAG_03121","SJAG_03648","SJAG_04928","SJAG_00984","SJAG_03261","SJAG_02809","SJAG_00737","SJAG_03258","SJAG_01136","SJAG_03910","SJAG_05286","SJAG_04785","SJAG_02432","SJAG_01285","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83677,87752,89319,89409,90297,93778,97417,99208,99950,99956,100958,104212,105330,109541,114514],"is_not":false,"summary":null,"term":"GO:0004252"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_02432":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"serine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-140840","Reactome:R-HSA-158333","Reactome:R-HSA-158766","Reactome:R-HSA-9033506","Reactome:R-HSA-1604731","Reactome:R-HSA-8865275","Reactome:R-HSA-5691512","Reactome:R-HSA-9829030","Reactome:R-HSA-422051","Reactome:R-HSA-9023626","Reactome:R-HSA-9655046","Reactome:R-HSA-1566981","Reactome:R-HSA-9710106","Reactome:R-HSA-1604741","Reactome:R-HSA-170844","Reactome:R-HSA-9829200","Reactome:R-HSA-1602488","Reactome:R-HSA-163798","Reactome:R-HSA-1604752","Reactome:R-HSA-977371","Reactome:R-HSA-9769949","Reactome:R-HSA-5591040","Reactome:R-HSA-140777","Reactome:R-HSA-158942","Reactome:R-HSA-159733","Reactome:R-HSA-166753","Reactome:R-HSA-9662786","Reactome:R-HSA-9710263","Reactome:R-HSA-2214330","Reactome:R-HSA-159771","Reactome:R-HSA-140769","Reactome:R-HSA-6801687","Reactome:R-HSA-9033490","Reactome:R-HSA-8849857","Reactome:R-HSA-9694661","Reactome:R-HSA-140700","Reactome:R-HSA-1592278","Reactome:R-HSA-2129357","Reactome:R-HSA-5210935","Reactome:R-HSA-1604359","Reactome:R-HSA-1592362","Reactome:R-HSA-140870","Reactome:R-HSA-9666383","Reactome:R-HSA-158311","Reactome:R-HSA-1592371","Reactome:R-HSA-6800200","Reactome:R-HSA-9653249","Reactome:R-HSA-9708859","Reactome:R-HSA-976743","Reactome:R-HSA-2534160","Reactome:R-HSA-1604722","Reactome:R-HSA-9668365","Reactome:R-HSA-9698988","Reactome:R-HSA-3785684","Reactome:R-HSA-141040","Reactome:R-HSA-2168923","Reactome:R-HSA-114697","Reactome:R-HSA-166817","Reactome:R-HSA-2534260","Reactome:R-HSA-400459","Reactome:R-HSA-8852716","Reactome:R-HSA-140599","Reactome:R-HSA-9668253","Reactome:R-HSA-1602473","Reactome:R-HSA-1454843","Reactome:R-HSA-1566962","Reactome:R-HSA-171288","Reactome:R-HSA-977615","Reactome:R-HSA-158925","Reactome:R-HSA-9673223","Reactome:R-HSA-9686731","Reactome:R-HSA-1604732","Reactome:R-HSA-1602466","Reactome:R-HSA-8874204","Reactome:R-HSA-265301","Reactome:R-HSA-1592270","EC:3.4.21.-","Reactome:R-HSA-8874205","Reactome:R-HSA-9023178","Reactome:R-HSA-8849826","Reactome:R-HSA-140664","Reactome:R-HSA-3814820","Reactome:R-HSA-140736","Reactome:R-HSA-140696","Reactome:R-HSA-173631","Reactome:R-HSA-9830882","Reactome:R-HSA-1592297","Reactome:R-HSA-173680","Reactome:R-HSA-9033515","Reactome:R-HSA-159868","Reactome:R-HSA-1799329","Reactome:R-HSA-173626","Reactome:R-HSA-5578783","Reactome:R-HSA-166792","Reactome:R-HSA-8874206","Reactome:R-HSA-9670874","Reactome:R-HSA-187020","Reactome:R-HSA-422021","Reactome:R-HSA-6800299","Reactome:R-HSA-9033520","Reactome:R-HSA-158982","Reactome:R-HSA-400492","Reactome:R-HSA-1604368","Reactome:R-HSA-2534206","Reactome:R-HSA-158747","Reactome:R-HSA-9033524","Reactome:R-HSA-9770187","Reactome:R-HSA-1912372","Reactome:R-HSA-8865276","Reactome:R-HSA-1592398","Reactome:R-HSA-9686710","Reactome:R-HSA-9694287","Reactome:R-HSA-158419","Reactome:R-HSA-159796","Reactome:R-HSA-9023633","Reactome:R-HSA-158300","Reactome:R-HSA-158750","Reactome:R-HSA-1912369","Reactome:R-HSA-3928657","Reactome:R-HSA-2471842","Reactome:R-HSA-9023632","Reactome:R-HSA-381500","Reactome:R-HSA-1604360","Reactome:R-HSA-183122","Reactome:R-HSA-159773","Reactome:R-HSA-2172405","Reactome:R-HSA-381135","Reactome:R-HSA-5210912","Reactome:R-HSA-6800198","Reactome:R-HSA-9033530","Reactome:R-HSA-9699007","Reactome:R-HSA-158137","Reactome:R-HSA-2514772","Reactome:R-HSA-3266557","Reactome:R-HSA-158164","Reactome:R-HSA-8850831","Reactome:R-HSA-1655842","Reactome:R-HSA-186785","Reactome:R-HSA-9033529","Reactome:R-HSA-2168960","Reactome:R-HSA-1602484","Reactome:R-HSA-159728","Reactome:R-HSA-174551","Reactome:R-HSA-1181152","Reactome:R-HSA-381466","Reactome:R-HSA-400496","Reactome:R-HSA-139893","Reactome:R-HSA-3788061","Reactome:R-HSA-2482180","Reactome:R-HSA-8874186","Reactome:R-HSA-1604690","Reactome:R-HSA-2471621","Reactome:R-HSA-5607002","Reactome:R-HSA-8855825","Reactome:R-HSA-1602458","Reactome:R-HSA-1566979","Reactome:R-HSA-382061","Reactome:R-HSA-9023196","Reactome:R-HSA-9023627","Reactome:R-HSA-1592436","Reactome:R-HSA-6807224","Reactome:R-HSA-8874212","Reactome:R-HSA-1592314","Reactome:R-HSA-1604712","Reactome:R-HSA-381461","Reactome:R-HSA-158744","Reactome:R-HSA-163843","Reactome:R-HSA-173745","Reactome:R-HSA-2022411","Reactome:R-HSA-1592316","Reactome:R-HSA-1474197","Reactome:R-HSA-9830805","Reactome:R-HSA-2514823","Reactome:R-HSA-1604763","Reactome:R-HSA-8874145","Reactome:R-HSA-183130","Reactome:R-HSA-140823","Reactome:R-HSA-381798","Reactome:R-HSA-141026","Reactome:R-HSA-158313","Reactome:R-HSA-381446"],"synonyms":[{"name":"blood coagulation factor activity","type":"related"},{"name":"serine elastase activity","type":"related"}],"termid":"GO:0004252","terms_by_termid":{"GO:0004252":null}}


id: GO:0071812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fever generation","termid":"GO:0031622"},{"relation_name":"is_a","term_name":"positive regulation of prostaglandin secretion","termid":"GO:0032308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fever generation by positive regulation of prostaglandin secretion","termid":"GO:0071812"}


id: PBO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2G","termid":"PBO:0061722"}


id: FYPO:0003964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased glutathione disulfide oxidoreductase activity","synonyms":[{"name":"reduced glutathione disulfide oxidoreductase activity","type":"exact"}],"termid":"FYPO:0003964"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: GO:1900751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-(trimethylammonio)butanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:20357772","PMID:16365044","PMID:20829798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transport","synonyms":[{"name":"4-(N-trimethylamino)butyrate transport","type":"exact"},{"name":"4-butyrobetaine transport","type":"exact"},{"name":"Actinine transport","type":"related"},{"name":"C7H15NO2 transport","type":"related"},{"name":"butyrobetaine transport","type":"related"},{"name":"deoxycarnitine transport","type":"related"},{"name":"gamma-Butyrobetain transport","type":"exact"},{"name":"gamma-butyrobetaine transport","type":"exact"}],"termid":"GO:1900751"}


id: PBO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.2.3","termid":"PBO:0000569"}


id: GO:0055047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the generative cell divides by mitosis to form two haploid cells. These will subsequently differentiate into sperm cells.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic nuclear division","termid":"GO:0140014"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"generative cell mitosis","termid":"GO:0055047"}


id: GO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha5-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA5-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071088"}


id: PBO:0109641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M (pseudogene)","termid":"PBO:0109641"}


id: GO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph","PMID:16860783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway involved in heart development","termid":"GO:0061341"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"}


id: PBO:0054941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2355","termid":"PBO:0054941"}


id: PBO:0063342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 2","termid":"PBO:0063342"}


id: GO:1901634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle membrane organization","synonyms":[{"name":"activation of SLMV biogenesis","type":"narrow"},{"name":"activation of synaptic vesicle membrane organisation","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"positive regulation of SLMV biogenesis","type":"narrow"},{"name":"positive regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"positive regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up regulation of SLMV biogenesis","type":"narrow"},{"name":"up regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up-regulation of SLMV biogenesis","type":"narrow"},{"name":"up-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"upregulation of SLMV biogenesis","type":"narrow"},{"name":"upregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901634"}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: GO:1904917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane from lysosomal lumen to cytosol.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000078","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"L-arginine transmembrane export from vacuole","termid":"GO:1990818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-arginine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904917"}


id: GO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075100)","termid":"GO:0075100"}


id: GO:0102956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + sinapoyl aldehyde = H+ + sinapaldehyde glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:sinapaldehyde 4-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-92","RHEA:57712"],"termid":"GO:0102956"}


id: GO:0120086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (3S)-(+)-asterisca-2(9),6-diene.","definition_xrefs":["PMID:27862766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3S)-(+)-asterisca-2(9),6-diene synthase activity","synonyms":[{"name":"asterisca-2(9),6-diene synthase activity","type":"broad"}],"termid":"GO:0120086"}


id: PBO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035763"}


id: PR:O94692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11093:SF2","OMA:SCHPO02903","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.08","secondary_identifiers":["UniProtKB:O94692"],"synonyms":[{"name":"Spom972h-RUVBL2","type":"exact"}],"termid":"PR:O94692"}


id: PBO:0061737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 1","termid":"PBO:0061737"}


id: SO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that inserts bases into in the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"internal_feature_elongation","termid":"SO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_insertion","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://vat.gersteinlab.org/formats.php","http://snpeff.sourceforge.net/SnpEff_manual.html","SO:0001651"],"synonyms":[{"name":"ANNOVAR:nonframeshift insertion","type":"exact"},{"name":"Jannovar:inframe_insertion","type":"exact"},{"name":"VAT:insertionNFS","type":"exact"},{"name":"VEP:inframe_insertion","type":"exact"},{"name":"inframe codon gain","type":"related"},{"name":"inframe increase in CDS length","type":"exact"},{"name":"inframe insertion","type":"exact"},{"name":"inframe_codon_gain","type":"exact"},{"name":"snpEFF:CODON_INSERTION","type":"exact"}],"termid":"SO:0001821"}


id: PBO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo13","termid":"PBO:0005213"}


id: PBO:0079268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC39A antisense RNA 1","termid":"PBO:0079268"}


id: PR:Q9US26
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.03","synonyms":[{"name":"Spom972h-fta2","type":"exact"},{"name":"sim4 complex subunit fta2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US26"}


id: FYPO:0000870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a lower extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone methylation during vegetative growth","synonyms":[{"name":"decreased histone methylation during mitotic cell cycle","type":"related"},{"name":"reduced histone methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000870"}


id: PBO:0043893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1","termid":"PBO:0043893"}


id: PBO:0055222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2648","termid":"PBO:0055222"}


id: PBO:0049350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 8","termid":"PBO:0049350"}


id: GO:0016421
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of a carboxyl group to a molecule that is attached to CoA, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016421","terms_by_termid":{"GO:0003989":null}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: PBO:0074365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 3","termid":"PBO:0074365"}


id: GO:0048869
data:
  {"annotated_genes":["SJAG_04184","SJAG_04236","SJAG_03746","SJAG_01483","SJAG_02241","SJAG_00405","SJAG_04271","SJAG_02392","SJAG_00826","SJAG_04275","SJAG_04010","SJAG_03483","SJAG_05309","SJAG_00663","SJAG_01531","SJAG_01017","SJAG_03090","SJAG_03587","SJAG_04868","SJAG_00486","SJAG_02718","SJAG_04853","SJAG_00974","SJAG_03557","SJAG_04470","SJAG_03536","SJAG_04922","SJAG_02529","SJAG_04901","SJAG_00114","SJAG_00514","SJAG_04859","SJAG_04238","SJAG_04483","SJAG_01321","SJAG_02320","SJAG_00821","SJAG_04080","SJAG_04140","SJAG_04615","SJAG_03057","SJAG_03915","SJAG_03013","SJAG_02248","SJAG_00971","SJAG_02736","SJAG_02169","SJAG_03581","SJAG_04781","SJAG_00993","SJAG_01769","SJAG_01662","SJAG_03688","SJAG_02712","SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90713,86035,91986],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[107439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[114605,92661,96849,108833,110058,93078,107635,100256,103853,91509,93010,101240,106248],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071998"},{"annotations":[90599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87911,110204,84406,113862,86418],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[105208,113863,113872,100299],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[101091,105438,106249,93725,87643],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[91510,110059,94957,114899,106250,95950,101407,95951,114606,97837,103515,115080,87437,113034,96019,93726,93685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[110060,93011,95953,100257,95952,102958,99049,103854,88437,93686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[90165,107441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[107327],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86890],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98418],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86892],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88331],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[95955,96238,95954,102134,90640,112085],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular developmental process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048869","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as dubious","termid":"PBO:0000199"}


id: GO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a Cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate mRNA or circRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"cap-independent translational initiation","termid":"GO:0002190"}


id: GO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:23034652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","termid":"GO:0044733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044735"}


id: GO:0031736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR11 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR11 chemokine receptor binding","synonyms":[{"name":"CCR11 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031736"}


id: PBO:0087982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; catalyzes modification of wobble bases in tRNA anticodons to 2, 5-methoxycarbonylmethyluridine and 5-methoxycarbonylmethyl-2-thiouridine; may act as part of a complex with Trm112p; deletion mutation increases translational infidelity, including amino acid misincorporation and -1 frameshifting, and also confers resistance to zymocin; null mutant displays activation of stress responses","termid":"PBO:0087982"}


id: PBO:0029356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Ssb1_foci","termid":"PBO:0029356"}


id: GO:2000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast proliferation","termid":"GO:2000291"}


id: GO:0033415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UGA codon-amino acid adaptor activity","synonyms":[{"name":"TGA codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033415"}


id: GO:0044734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant positive regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:23034652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","termid":"GO:0044733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044734"}


id: GO:0014007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microglia differentiation","termid":"GO:0014006"},{"relation_name":"is_a","term_name":"negative regulation of macrophage differentiation","termid":"GO:0045650"},{"relation_name":"is_a","term_name":"negative regulation of glial cell differentiation","termid":"GO:0045686"},{"relation_name":"negatively_regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglia differentiation","synonyms":[{"name":"down regulation of microglia differentiation","type":"exact"},{"name":"down-regulation of microglia differentiation","type":"exact"},{"name":"downregulation of microglia differentiation","type":"exact"},{"name":"inhibition of microglia differentiation","type":"narrow"},{"name":"negative regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014007"}


id: GO:0033276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.","definition_xrefs":["PMID:10373431","PMID:9603525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFTC complex","termid":"GO:0033276"}


id: GO:1903300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexokinase activity.","definition_xrefs":["GOC:TermGenie","PMID:15804508","GO_REF:0000059","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinase activity","termid":"GO:0033673"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of hexokinase activity","synonyms":[{"name":"down regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down regulation of hexokinase D","type":"related"},{"name":"down regulation of hexokinase activity","type":"exact"},{"name":"down regulation of hexokinase type I activity","type":"narrow"},{"name":"down regulation of hexokinase type II activity","type":"narrow"},{"name":"down regulation of hexokinase type III activity","type":"narrow"},{"name":"down regulation of hexokinase type IV","type":"related"},{"name":"down regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"down-regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"down-regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"down-regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"down-regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"down-regulation of hexokinase D","type":"related"},{"name":"down-regulation of hexokinase activity","type":"exact"},{"name":"down-regulation of hexokinase type I activity","type":"narrow"},{"name":"down-regulation of hexokinase type II activity","type":"narrow"},{"name":"down-regulation of hexokinase type III activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV","type":"related"},{"name":"down-regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"down-regulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"downregulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"downregulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"downregulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"downregulation of hexokinase (phosphorylating)","type":"exact"},{"name":"downregulation of hexokinase D","type":"related"},{"name":"downregulation of hexokinase activity","type":"exact"},{"name":"downregulation of hexokinase type I activity","type":"narrow"},{"name":"downregulation of hexokinase type II activity","type":"narrow"},{"name":"downregulation of hexokinase type III activity","type":"narrow"},{"name":"downregulation of hexokinase type IV","type":"related"},{"name":"downregulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"downregulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"inhibition of ATP-dependent hexokinase activity","type":"narrow"},{"name":"inhibition of ATP:D-hexose 6-phosphotransferase activity","type":"narrow"},{"name":"inhibition of glucose ATP phosphotransferase activity","type":"narrow"},{"name":"inhibition of hexokinase (phosphorylating)","type":"narrow"},{"name":"inhibition of hexokinase D","type":"related"},{"name":"inhibition of hexokinase activity","type":"narrow"},{"name":"inhibition of hexokinase type I activity","type":"narrow"},{"name":"inhibition of hexokinase type II activity","type":"narrow"},{"name":"inhibition of hexokinase type III activity","type":"narrow"},{"name":"inhibition of hexokinase type IV","type":"related"},{"name":"inhibition of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"inhibition of hexokinase type IV glucokinase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent hexokinase activity","type":"exact"},{"name":"negative regulation of ATP:D-hexose 6-phosphotransferase activity","type":"exact"},{"name":"negative regulation of glucose ATP phosphotransferase activity","type":"exact"},{"name":"negative regulation of hexokinase (phosphorylating)","type":"exact"},{"name":"negative regulation of hexokinase D","type":"related"},{"name":"negative regulation of hexokinase type I activity","type":"narrow"},{"name":"negative regulation of hexokinase type II activity","type":"narrow"},{"name":"negative regulation of hexokinase type III activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV","type":"related"},{"name":"negative regulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"negative regulation of hexokinase type IV glucokinase activity","type":"exact"}],"termid":"GO:1903300"}


id: FYPO:0003244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome takes place normally for some, but is decreased for other, specific introns.","definition_xrefs":["PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome","termid":"FYPO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome, intron-specific","synonyms":[{"name":"differential pre-mRNA splicing defects","type":"exact"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"intron-specific abnormal nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"intron-specific mRNA splicing defects","type":"exact"}],"termid":"FYPO:0003244"}


id: PBO:0077100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 1","termid":"PBO:0077100"}


id: GO:0097734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.","definition_xrefs":["PMID:19442504","GOC:PARL","GOC:bf","PMID:25392495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular exosome biogenesis","synonyms":[{"name":"ILV assembly","type":"related"},{"name":"exosome assembly or secretion","type":"exact"},{"name":"exosome biogenesis","type":"exact"},{"name":"exosome production","type":"exact"},{"name":"intraluminal vesicle assembly","type":"related"}],"termid":"GO:0097734"}


id: MOD:00239
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234","PubMed:11875433","PubMed:1339288","PubMed:10660523","Unimod:34#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methylated residue","termid":"MOD:00654"},{"relation_name":"is_a","term_name":"monomethylated L-cysteine","termid":"MOD:01682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"S-methyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(methylsulfanyl)propanoic acid","type":"exact"},{"name":"ACT_SITE S-methylcysteine intermediate","type":"exact"},{"name":"L-3-(methylthio)alanine","type":"exact"},{"name":"MOD_RES S-methylcysteine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"S-methyl-L-cysteine","type":"exact"},{"name":"S-methylated L-cysteine","type":"exact"},{"name":"SMeCys","type":"exact"}],"termid":"MOD:00239"}


id: GO:0009278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A peptidoglycan polymer that forms the shape-determining structure of the cell all of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete murein sacculus (obsolete GO:0009278)","synonyms":[{"name":"murein sacculus","type":"exact"}],"termid":"GO:0009278"}


id: PBO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umil/min/mg","termid":"PBO:0001494"}


id: PBO:0087801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; substrate of the phosphatase calcineurin; interacts with homolog Frt2p; promotes cell growth in stress conditions, possibly via a role in posttranslational translocation; FRT1 has a paralog, FRT2, that arose from the whole genome duplication","termid":"PBO:0087801"}


id: GO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to suramin, a naphthalenesulfonic acid compound which is used in the treatment of diseases caused by trypanosomes and worms.","definition_xrefs":["GOC:jl","Wikipedia:Suramin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"suramin binding","synonyms":[{"name":"Germanin binding","type":"exact"}],"termid":"GO:0043924"}


id: SO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glycyl tRNA (SO:0000263).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine_tRNA_primary_transcript","synonyms":[{"name":"glycine tRNA primary transcript","type":"exact"}],"termid":"SO:0000218"}


id: GO:0009000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + L-alanine + acceptor.","definition_xrefs":["EC:4.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"selenocysteine lyase activity","secondary_identifiers":["Reactome:R-HSA-2408524","RHEA:11632","MetaCyc:SELENOCYSTEINE-LYASE-RXN"],"synonyms":[{"name":"L-selenocysteine selenide-lyase (L-alanine-forming)","type":"related"},{"name":"selenocysteine beta-lyase activity","type":"related"},{"name":"selenocysteine reductase activity","type":"related"}],"termid":"GO:0009000"}


id: FYPO:0007099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000054","FYPO:0000257","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"normal spindle elongation in meiosis I","synonyms":[{"name":"normal meiotic spindle elongation in first meiotic nuclear division","type":"exact"},{"name":"normal meiotic spindle elongation in meiosis I","type":"exact"}],"termid":"FYPO:0007099"}


id: PBO:0056103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 8","termid":"PBO:0056103"}


id: PBO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin regulatory subunit (calcineurin B)","termid":"PBO:0010344"}


id: FYPO:0004308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CENP-A-containing chromatin organization is abnormal.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:9230309","GO:0061641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin organization","synonyms":[{"name":"abnormal CENP-A containing chromatin organisation","type":"exact"},{"name":"abnormal CENP-A containing chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing chromatin organization during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization at centromere central core","type":"related"}],"termid":"FYPO:0004308"}


id: PBO:0051076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-13","termid":"PBO:0051076"}


id: GO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the size of the nucleus with respect to the cytoplasm modulates the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell growth by detection of nuclear:cytoplasmic ratio (obsolete GO:0001559)","synonyms":[{"name":"detection of nuclear:cytoplasmic ratio to regulate cell growth","type":"exact"},{"name":"interpretation of nuclear:cytoplasmic ratio to regulate cell growth","type":"exact"},{"name":"regulation of cell growth by nuclear:cytoplasmic ratio","type":"exact"},{"name":"regulation of cell growth by sensing of nuclear:cytoplasmic ratio","type":"exact"}],"termid":"GO:0001559"}


id: GO:0043934
data:
  {"annotated_genes":["SJAG_04853","SJAG_03013","SJAG_00821","SJAG_02736","SJAG_04010","SJAG_03483","SJAG_02529","SJAG_03090","SJAG_01662","SJAG_04238","SJAG_04781","SJAG_03688","SJAG_00971","SJAG_00663","SJAG_03250","SJAG_04615","SJAG_01531","SJAG_00405","SJAG_05309","SJAG_02169","SJAG_01321","SJAG_04184","SJAG_00974","SJAG_04859","SJAG_04868","SJAG_00114","SJAG_00826","SJAG_00993","SJAG_01769","SJAG_03557","SJAG_04271","SJAG_02248","SJAG_04922","SJAG_02712","SJAG_02718","SJAG_04275","SJAG_04140","SJAG_04236","SJAG_04470","SJAG_03746","SJAG_01483","SJAG_03057","SJAG_04483","SJAG_04901","SJAG_03587","SJAG_03915","SJAG_03536","SJAG_04080","SJAG_02241","SJAG_02320","SJAG_00486","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[107635,108833,110058,101240,114605,103853,92661,93078,91509,96849,100256,106248,93010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107440],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[90599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84406,86418,110204,87911,113862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[100299,113863,113872,105208],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[106249,87643,101091,93725,105438],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[97837,113034,110059,114899,87437,115080,114606,93685,101407,91510,103515,96019,106250,93726,95951,95950,94957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[88437,95952,95953,102958,103854,110060,99049,93011,93686,100257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[90165,107441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[107327],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[98418],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86892],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[86893],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0043938"},{"annotations":[88331],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[112085,95954,102134,90640,96238,95955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure. A spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporulation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Spore"],"termid":"GO:0043934","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0043938":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0043541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin","termid":"PBO:0043541"}


id: PBO:0087911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state","termid":"PBO:0087911"}


id: FYECO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerophosphocholine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerophosphocholine","secondary_identifiers":["PMID:38133430"],"termid":"FYECO:0000439"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_00845","SJAG_02838","SJAG_02392","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86933,91994,99833,106899,115211],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: MOD:01528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01528"}


id: PBO:0031671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_secretion","termid":"PBO:0031671"}


id: PBO:0110826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, glucose starvation sensing, Rst2","termid":"PBO:0110826"}


id: PBO:0006666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Spc7","termid":"PBO:0006666"}


id: PBO:0071074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 76","termid":"PBO:0071074"}


id: GO:0036498
data:
  {"annotated_genes":["SJAG_04435","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85685,89229],"is_not":false,"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.","definition_xrefs":["PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"IRE1-mediated unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ERN1-mediated unfolded protein response","type":"related"},{"name":"IRE1 branch of UPR","type":"exact"},{"name":"IRE1 signal transduction pathway","type":"broad"},{"name":"IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"IRE1alpha unfolded protein response","type":"narrow"},{"name":"IRE1p unfolded protein response","type":"narrow"},{"name":"UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"inositol-requiring enzyme 1-mediated unfolded protein response","type":"related"},{"name":"inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:0036498","terms_by_termid":{"GO:0036498":null}}


id: PBO:0078076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 2","termid":"PBO:0078076"}


id: PBO:0054771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2183","termid":"PBO:0054771"}


id: GO:0006380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-A binding (obsolete GO:0006380)","synonyms":[{"name":"poly-A binding","type":"exact"}],"termid":"GO:0006380"}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: GO:0018481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: <stereo>cis,trans</stereo>-4-hydroxymuconate semialdehyde + H2O + NAD+ = 2 H+ + maleylacetate + NADH.","definition_xrefs":["EC:1.2.1.61","RHEA:22420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.61-RXN","UM-BBD_reactionID:r0229","KEGG_REACTION:R05236"],"synonyms":[{"name":"4-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018481"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase domain containing 1","termid":"PBO:0050012"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: PBO:0038619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 1","termid":"PBO:0038619"}


id: GO:0098861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments that is part of filopodium. Filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex.","definition_xrefs":["PMID:12566431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament bundle of filopodium","termid":"GO:0098861"}


id: PBO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_inhibits","termid":"PBO:0034288"}


id: MOD:01236
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["PubMed:11467524","PubMed:15549660","Unimod:258#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-tyrosine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01236"}


id: PBO:0081043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1 like","termid":"PBO:0081043"}


id: GO:0044878
data:
  {"annotated_genes":["SJAG_04280","SJAG_00082","SJAG_04597","SJAG_02266","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86167,90544,96657,97558,112118],"is_not":false,"summary":null,"term":"GO:0044878"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that detects a defect in cytokinesis and prevents further rounds of nuclear division until cytokinesis is completed.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:jl","PMID:17538026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02266":null,"SJAG_03073":null,"SJAG_04280":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic cytokinesis checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903820"],"synonyms":[{"name":"cytokinesis after mitosis checkpoint","type":"related"},{"name":"defective cytokinesis checkpoint","type":"related"},{"name":"mitotic cytokinesis checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signaling pathway involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling cascade involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling pathway involved in mitotic cytokinesis checkpoint","type":"related"}],"termid":"GO:0044878","terms_by_termid":{"GO:0044878":null}}


id: GO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070445"}


id: FYPO:0005043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to ultraviolet light is abnormal.","definition_xrefs":["PomBase:mah","PMID:17369398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of translation in response to UV","synonyms":[{"name":"abnormal regulation of translation in response to UV during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to UV during vegetative growth","type":"exact"},{"name":"abnormal regulation of translation in response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005043"}


id: GO:0034804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-11,12-epoxide.","definition_xrefs":["UM-BBD_reactionID:r1119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzo(a)pyrene 11,12-epoxidase activity","termid":"GO:0034804"}


id: PBO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.1","termid":"PBO:0003361"}


id: PBO:0047368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 21, pseudogene","termid":"PBO:0047368"}


id: PBO:0084396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084396"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: GO:0097508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated guanine (xanthine).","definition_xrefs":["PMID:18789404","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"xanthine DNA N-glycosylase activity","synonyms":[{"name":"xanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097508"}


id: PBO:0077967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 19-1","termid":"PBO:0077967"}


id: GO:0052718
data:
  {"annotated_genes":["SJAG_04189","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97235,100363],"is_not":false,"summary":null,"term":"GO:0052718"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses tRNA-specific adenosine-34 deaminase activity. In eukaryotes the complex is a heterodimer; the subunits are known as Tad2p and Tad3p in yeasts and Adat2 and Adat3 in human.","definition_xrefs":["PMID:17875641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA-A34 deaminase complex","type":"exact"}],"termid":"GO:0052718","terms_by_termid":{"GO:0052718":null}}


id: PBO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 11","termid":"PBO:0043099"}


id: PATO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001074 absolute impulse (obsolete PATO:0001074)","termid":"PATO:0001074"}


id: FYPO:0006396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which interphase microtubule organizing center (iMTOC) assembly is abnormal. iMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an interphase microtubule organizing center.","definition_xrefs":["PomBase:mah","GO:0031024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal iMTOC assembly","synonyms":[{"name":"abnormal iMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal iMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal iMTOC formation","type":"exact"},{"name":"abnormal interphase microtubule organizing center assembly","type":"exact"},{"name":"abnormal interphase microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0006396"}


id: GO:0010889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"regulates","term_name":"sequestering of triglyceride","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sequestering of triglyceride","synonyms":[{"name":"regulation of sequestering of triacylglycerol","type":"exact"},{"name":"regulation of triacylglycerol sequestration","type":"exact"}],"termid":"GO:0010889"}


id: PBO:0031212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multiseptate_vegetative_cell","termid":"PBO:0031212"}


id: PBO:0079624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N","termid":"PBO:0079624"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: PBO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp0 (predicted)","termid":"PBO:0005714"}


id: PBO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli ispA","termid":"PBO:0018231"}


id: GO:2000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"negatively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic cell clearance","synonyms":[{"name":"negative regulation of apoptotic cell removal","type":"exact"},{"name":"negative regulation of efferocytosis","type":"exact"},{"name":"negative regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000426"}


id: PBO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.20","termid":"PBO:0001558"}


id: PBO:0072662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 3 pseudogene 1","termid":"PBO:0072662"}


id: GO:0099035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of spine apparatus membrane (obsolete GO:0099035)","termid":"GO:0099035"}


id: PBO:0086756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be an inactive evolutionary remnant that along with neighboring gene YOL163W may have constituted a second sulfonate transporter and SOA1 paralog that is intact in S. uvarum, S. eubayanus and S. arboricola and named SOA2; member of the Dal5p subfamily of the major facilitator family","termid":"PBO:0086756"}


id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PR:000050529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PMID:22150589","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me1(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf1/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050529"}


id: GO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in an increase in the rate, frequency or extent of a Wnt signaling pathway.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by BMP signaling pathway (obsolete GO:0060804)","synonyms":[{"name":"positive regulation of WNT receptor signaling pathway by BMP signaling pathway","type":"exact"},{"name":"positive regulation of WNT receptor signalling pathway by BMP signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway by BMP signaling pathway","type":"exact"}],"termid":"GO:0060804"}


id: PBO:0018126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain protein (predicted)","termid":"PBO:0018126"}


id: GO:0110053
data:
  {"annotated_genes":["SJAG_04479","SJAG_00521","SJAG_01993","SJAG_04522","SJAG_03086","SJAG_02566","SJAG_01894","SJAG_04982","SJAG_03455","SJAG_01943","SJAG_04703","SJAG_02700","SJAG_04100","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95026,84452,88470,88654,114710,110439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[103747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[86843,98868,101284,97878,85999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[110442,93864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament organization.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110053","terms_by_termid":{"GO:0030833":null,"GO:0032231":null,"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:1903359
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96209,100653],"is_not":false,"summary":null,"term":"GO:1903359"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a lateral cortical node.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"lateral cortical node assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node assembly","type":"exact"},{"name":"Skb1-containing cortical node formation","type":"exact"},{"name":"lateral cortical node formation","type":"exact"}],"termid":"GO:1903359","terms_by_termid":{"GO:1903359":null}}


id: PBO:0028209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell,_elongated_upon_mitotic_entry","termid":"PBO:0028209"}


id: PBO:0045662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 2","termid":"PBO:0045662"}


id: PBO:0086552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL034C is not an essential gene","termid":"PBO:0086552"}


id: PBO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCNA pseudogene 1","termid":"PBO:0048472"}


id: PBO:0075013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-24","termid":"PBO:0075013"}


id: PR:Q9Y814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- htd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.15c","synonyms":[{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-htd2","type":"exact"}],"termid":"PR:Q9Y814"}


id: GO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, cytoplasmic mediator activity (obsolete GO:0005072)","synonyms":[{"name":"TGF-beta receptor, cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, cytoplasmic mediator activity","type":"exact"}],"termid":"GO:0005072"}


id: PBO:0073587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 3","termid":"PBO:0073587"}


id: PBO:0087907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor (bHLH) involved in interorganelle communication; contributes to communication between mitochondria, peroxisomes, and nucleus; target of Hog1p; activated in stochastic pulses of nuclear localization","termid":"PBO:0087907"}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: GO:0019655
data:
  {"annotated_genes":["SJAG_00240","SJAG_03822","SJAG_03743","SJAG_01414","SJAG_03370","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84697,94856,94857,110727,110728],"is_not":false,"summary":null,"term":"GO:0019655"},{"annotations":[92715],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.","definition_xrefs":["GOC:nr","ISBN:0716720094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Ethanol_fermentation","GO:0043458"],"synonyms":[{"name":"alcoholic fermentation","type":"related"},{"name":"ethanol anabolism during fermentation","type":"related"},{"name":"ethanol biosynthetic process involved in glucose fermentation to ethanol","type":"related"},{"name":"ethanol fermentation","type":"exact"},{"name":"ethanol formation during fermentation","type":"related"},{"name":"ethanol synthesis during fermentation","type":"related"},{"name":"glucose catabolic process to ethanol","type":"exact"},{"name":"glucose fermentation to ethanol","type":"exact"}],"termid":"GO:0019655","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: FYPO:0003703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000641","FYPO:0000661","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}


id: GO:0010190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"cytochrome b6f complex assembly","synonyms":[{"name":"cytochrome b6f complex biogenesis","type":"exact"}],"termid":"GO:0010190"}


id: PBO:0078370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 14-1","termid":"PBO:0078370"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: PBO:0090800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex cyclin Mcs2","termid":"PBO:0090800"}


id: GO:0071200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:12575952","PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Kv4.2-DPP6 channel complex","secondary_identifiers":["CORUM:603"],"synonyms":[{"name":"Kv4.2-DPPX channel complex","type":"exact"}],"termid":"GO:0071200"}


id: GO:1903795
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["PMID:11336802","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of inorganic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of inorganic anion membrane transport","type":"exact"},{"name":"regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903795","terms_by_termid":{"GO:2000185":null}}


id: GO:1902894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000058","GOC:dph","PMID:24699545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of miRNA transcription","synonyms":[{"name":"down regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"inhibition of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of miRNA gene transcription","type":"exact"},{"name":"negative regulation of microRNA gene transcription","type":"exact"},{"name":"negative regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"negative regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of primary miRNA gene transcription","type":"exact"}],"termid":"GO:1902894"}


id: GO:0102200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acylphosphatidylethanolamine = H+ + an N-acylethanolamine + a 1,2-diacyl-sn-glycerol 3-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetylphosphatidylethanolamine-hydrolysing phospholipase activity (obsolete GO:0102200)","termid":"GO:0102200"}


id: FYPO:0007519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA occupies a normal (i.e. indistinguishable from wild type) portion of the total nuclear volume. The nuclear volume itself is also normal.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal DNA volume","synonyms":[{"name":"normal DNA volume during mitotic cell cycle","type":"related"},{"name":"normal DNA volume during vegetative growth","type":"exact"}],"termid":"FYPO:0007519"}


id: PBO:0017059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family, with repeat expansion","termid":"PBO:0017059"}


id: PBO:0069234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 489, pseudogene","termid":"PBO:0069234"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0008150","GO:0140056"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: PBO:0076748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 3","termid":"PBO:0076748"}


id: GO:0007196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor signaling pathway","termid":"GO:0007216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by G-protein-coupled glutamate receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signalling pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylyl cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0007196"}


id: GO:0016031
data:
  {"annotated_genes":["SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95664],"is_not":false,"summary":null,"term":"GO:0016031"}]},"cv_name":"biological_process","definition":"The process in which a tRNA is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GOC:ma","PMID:10988073","PMID:11121736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into mitochondrion","termid":"GO:0035927"},{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"tRNA import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic tRNA import into mitochondria","type":"exact"},{"name":"cytoplasmic tRNA import into mitochondrion","type":"narrow"},{"name":"cytoplasmic tRNA transport into mitochondrion","type":"exact"},{"name":"cytoplasmic tRNA, mitochondrial import","type":"exact"},{"name":"mitochondrial import of cytoplasmic tRNA","type":"narrow"},{"name":"nuclear-encoded tRNA import into mitochondrion","type":"narrow"}],"termid":"GO:0016031","terms_by_termid":{"GO:0016031":null}}


id: PBO:0028017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_farnesyltransferase_activity","termid":"PBO:0028017"}


id: PBO:0068000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 302","termid":"PBO:0068000"}


id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042518","GO:0042512","GO:0042521","GO:0042527","GO:0042524","GO:0042530","GO:0042514"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: SO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat expansion with an increase in a sequence of three nucleotide units repeated in tandem compared to a reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_expansion","termid":"SO:0002162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_expansion","synonyms":[{"name":"trinucleotide repeat expansion","type":"exact"}],"termid":"SO:0002165"}


id: PBO:0005647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17","termid":"PBO:0005647"}


id: GO:0006413
data:
  {"annotated_genes":["SJAG_01117","SJAG_02263","SJAG_00662","SJAG_04093","SJAG_03534","SJAG_02628","SJAG_03629","SJAG_03788","SJAG_02072","SJAG_03147","SJAG_01368","SJAG_04744","SJAG_04891","SJAG_03472","SJAG_02026","SJAG_00507","SJAG_02061","SJAG_02856","SJAG_03732","SJAG_04873","SJAG_01249","SJAG_02638","SJAG_02471","SJAG_01942","SJAG_01487","SJAG_04635","SJAG_03996","SJAG_01954","SJAG_03678","SJAG_01659","SJAG_02995","SJAG_02390","SJAG_02376","SJAG_00690","SJAG_04383","SJAG_01436","SJAG_03223","SJAG_03869","SJAG_00105","SJAG_04981","SJAG_00169","SJAG_02307","SJAG_04900","SJAG_05003","SJAG_01643","SJAG_02164","SJAG_02201","SJAG_04772","SJAG_01576","SJAG_00892","SJAG_00466","SJAG_03433","SJAG_00786","SJAG_02592","SJAG_03658","SJAG_00912","SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66186,88916,114654],"is_not":false,"summary":null,"term":"GO:0006413"},{"annotations":[111719,96624,103146,114582,92806,86530,93930,101737,106748,93373,99349,99527,100882,86074,88914,83719,86113,94519,110105,93951,99661,103438,106833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002183"},{"annotations":[90923,96223,106834,95058,86114,101732,101440,93931,92008,93871,92994,107465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[101536,92224,104902,92722,114130,100186],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[101712,89795,98754,87156,104471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070124"},{"annotations":[87455,105812,108283],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[88659,105813,88955,111720,95459,90503],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[96582],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[97130],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045948"},{"annotations":[100090,99458,91362],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[99228],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990983"},{"annotations":[101441,100187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00105":null,"SJAG_00169":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00892":null,"SJAG_00912":null,"SJAG_01117":null,"SJAG_01249":null,"SJAG_01368":null,"SJAG_01436":null,"SJAG_01487":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02072":null,"SJAG_02164":null,"SJAG_02201":null,"SJAG_02263":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03534":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03794":null,"SJAG_03869":null,"SJAG_03996":null,"SJAG_04093":null,"SJAG_04383":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04873":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational initiation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006454","GO:0006440"],"synonyms":[{"name":"biopolymerisation","type":"broad"},{"name":"biopolymerization","type":"broad"},{"name":"protein synthesis initiation","type":"broad"},{"name":"translation initiation","type":"exact"}],"termid":"GO:0006413","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002183":null,"GO:0002188":null,"GO:0006413":null,"GO:0045948":null,"GO:0070124":null,"GO:0070134":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null}}


id: PBO:0069201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 455, pseudogene","termid":"PBO:0069201"}


id: FYPO:0005820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of neddylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein neddylation during vegetative growth","termid":"FYPO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein neddylation during vegetative growth","synonyms":[{"name":"increased protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005820"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: PBO:0066202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 3","termid":"PBO:0066202"}


id: PBO:0041550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 63","termid":"PBO:0041550"}


id: PBO:0066933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 235","termid":"PBO:0066933"}


id: PBO:0027224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_division_timing_change_upon_nitrogen_source_shift","termid":"PBO:0027224"}


id: PBO:0046650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell adhesion molecule","termid":"PBO:0046650"}


id: GO:0070638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleoside catabolic process","synonyms":[{"name":"pyridine nucleoside breakdown","type":"exact"},{"name":"pyridine nucleoside catabolism","type":"exact"},{"name":"pyridine nucleoside degradation","type":"exact"}],"termid":"GO:0070638"}


id: PBO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030022"}


id: GO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains gamma-catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["GOC:BHF","PMID:14661054","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catenin-TCF7L2 complex","termid":"GO:0071664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"gamma-catenin-TCF7L2 complex","synonyms":[{"name":"gamma-catenin-TCF4 complex","type":"exact"},{"name":"plakoglobin-TCF4 complex","type":"exact"}],"termid":"GO:0071665"}


id: PR:Q8TFH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein eos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.08","synonyms":[{"name":"Spom972h-eos1","type":"exact"}],"termid":"PR:Q8TFH6"}


id: SO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.","definition_xrefs":["PMID:8689565","PMID:17347150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSE","synonyms":[{"name":"heat shock element","type":"exact"}],"termid":"SO:0001850"}


id: PBO:0091878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator Fub2","termid":"PBO:0091878"}


id: GO:0006928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed, self-propelled movement of a cell or subcellular component without the involvement of an external agent such as a transporter or a pore.","definition_xrefs":["GOC:jl","GOC:dph","GOC:dgh","GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete movement of cell or subcellular component (obsolete GO:0006928)","synonyms":[{"name":"cell movement","type":"related"},{"name":"cellular component motion","type":"exact"},{"name":"cellular component movement","type":"exact"}],"termid":"GO:0006928"}


id: GO:1990036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions into a sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","PMID:17286271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}


id: PBO:0041477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 68","termid":"PBO:0041477"}


id: FYECO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with proline as the nitrogen source, and then shifted to a medium with glutamate as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, proline to glutamate","termid":"FYECO:0000219"}


id: PATO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to breaks without significant deformation (strain) when subjected to stress.","definition_xrefs":["wikipedia:http://en.wikipedia.org/wiki/Brittleness"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brittle","termid":"PATO:0002477"}


id: PBO:0066838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 137","termid":"PBO:0066838"}


id: PBO:0046792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EZR pseudogene 1","termid":"PBO:0046792"}


id: PBO:0050419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein F","termid":"PBO:0050419"}


id: FYPO:0000385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type). Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal macroautophagy","synonyms":[{"name":"autophagy: normal","type":"broad"}],"termid":"FYPO:0000385"}


id: PBO:0028507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing_at_cryptic_splice_sites","termid":"PBO:0028507"}


id: GO:0036266
data:
  {"annotated_genes":["SJAG_03345","SJAG_00948","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85426,100935,111873],"is_not":false,"summary":null,"term":"GO:0036266"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex involved in the release of polyubiquitinated proteins, including those damaged by oxidative stress, from the outer mitochondria membrane into the cytoplasm where they are presented to the proteasome for proteolysis, a process also referred to as mitochondria-associated degradation (MAD). In budding yeast, this complex includes Cdc48p, Npl4p and Vms1p.","definition_xrefs":["PMID:21936843","GOC:rn","PMID:21070972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739","GO:0032991"],"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Vms1p complex","type":"exact"},{"name":"Vms1-Cdc48-Npl4 complex","type":"exact"},{"name":"Vms1p-Cdc48p-Npl4p complex","type":"exact"}],"termid":"GO:0036266","terms_by_termid":{"GO:0036266":null}}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["GOC:dos","GOC:add","GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


id: PR:Q9UT21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A developmentally-regulated GTP-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11702:SF8","PRO:DNx","OMA:SCHPO00593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C9.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.07c","secondary_identifiers":["UniProtKB:Q9UT21"],"synonyms":[{"name":"Spom972h-DRG1","type":"exact"}],"termid":"PR:Q9UT21"}


id: PBO:0031237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_hydrogen_peroxide","termid":"PBO:0031237"}


id: FYPO:0002457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable curved vegetative cell with abnormal septum","termid":"FYPO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"viable curved elongated vegetative cell with abnormal septum","synonyms":[{"name":"curved elongated viable cell with abnormal septum","type":"exact"},{"name":"viable curved elongated abnormally septated vegetative cell","type":"exact"},{"name":"viable curved elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002457"}


id: PBO:0084744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial isoleucyl-tRNA synthetase; null mutant is deficient in respiratory growth; human homolog IARS2 implicated in mitochondrial diseases, can partially complement yeast null mutant","termid":"PBO:0084744"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: PBO:0074193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 3","termid":"PBO:0074193"}


id: GO:0140619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases a DNA strand exchange activity.","definition_xrefs":["PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"DNA strand exchange activator activity","termid":"GO:0140619"}


id: PBO:0059847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like","termid":"PBO:0059847"}


id: PBO:0069367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 627, pseudogene","termid":"PBO:0069367"}


id: GO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-demethylstaurosporine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + H+ + staurosporine.","definition_xrefs":["EC:2.1.1.139","RHEA:11696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3'-demethylstaurosporine O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05757","MetaCyc:2.1.1.139-RXN"],"synonyms":[{"name":"3'-demethoxy-3'-hydroxystaurosporine O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3'-demethylstaurosporine O-methyltransferase activity","type":"related"},{"name":"staurosporine synthase activity","type":"related"}],"termid":"GO:0030793"}


id: GO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from one host to another (or another place in the environment) by means of a third organism (often an insect or other animal). The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host by vector (obsolete GO:0044008)","synonyms":[{"name":"dissemination or transmission of organism from host by vector","type":"exact"}],"termid":"GO:0044008"}


id: PBO:0058651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6780a","termid":"PBO:0058651"}


id: FYPO:0003691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-demethoxyubiquinone-10 ()2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone, an intermediate in ubiquinone biosynthesis) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 5-demethoxyubiquinone-10 level","synonyms":[{"name":"increased 5-demethoxyubiquinone-10 accumulation","type":"related"},{"name":"increased cellular 2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone level","type":"exact"},{"name":"increased cellular 5-demethoxyubiquinone-10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular 5-demethoxyubiquinone-10 level during vegetative growth","type":"exact"},{"name":"increased cellular demethoxyubiquinone-10 level","type":"broad"}],"termid":"FYPO:0003691"}


id: PBO:0031907
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia","termid":"PBO:0031907"}


id: GO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002600"}


id: PBO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf22","termid":"PBO:0005787"}


id: PBO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 20","termid":"PBO:0060032"}


id: PBO:0080186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 3 pseudogene 1","termid":"PBO:0080186"}


id: PBO:0058847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8076","termid":"PBO:0058847"}


id: GO:0005972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen alpha chain (obsolete GO:0005972)","synonyms":[{"name":"fibrinogen alpha chain","type":"exact"}],"termid":"GO:0005972"}


id: PBO:0060127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 28","termid":"PBO:0060127"}


id: PBO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 41, pseudogene","termid":"PBO:0052801"}


id: GO:0009852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of auxins, a group of plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:lm","GOC:lr","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin catabolic process","synonyms":[{"name":"auxin breakdown","type":"exact"},{"name":"auxin catabolism","type":"exact"},{"name":"auxin degradation","type":"exact"}],"termid":"GO:0009852"}


id: GO:2001156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of proline catabolic process to glutamate","synonyms":[{"name":"regulation of proline breakdown to glutamate","type":"exact"},{"name":"regulation of proline degradation to glutamate","type":"exact"},{"name":"regulation of proline oxidation","type":"related"}],"termid":"GO:2001156"}


id: GO:0089702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ditrans,octacis-undecaprenyl phosphate = UMP + alpha-D-glucopyranosyl-diphospho-ditrans,octacis-undecaprenol.","definition_xrefs":["GOC:dos","GOC:imk","EC:2.7.8.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-phosphate glucose phosphotransferase activity","termid":"GO:0089702"}


id: PBO:0088298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Velum formation protein 1-like conserved fungal family","termid":"PBO:0088298"}


id: PBO:0069405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 665, pseudogene","termid":"PBO:0069405"}


id: PBO:0036286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg14","termid":"PBO:0036286"}


id: PBO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 4","termid":"PBO:0045706"}


id: PBO:0085033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-canonical poly(A) polymerase; involved in nuclear RNA degradation as a component of TRAMP; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; required for mRNA surveillance and maintenance of genome integrity, serving as a link between RNA and DNA metabolism; overlapping but non-redundant functions with Trf5p; relocalizes to cytosol in response to hypoxia","termid":"PBO:0085033"}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: PBO:0079646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2R2 antisense RNA 1","termid":"PBO:0079646"}


id: GO:0052699
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99757,107662,107663],"is_not":false,"summary":null,"term":"GO:0052699"},{"annotations":[61250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"cellular modified histidine biosynthetic process","termid":"GO:0052703"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"ergothioneine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine anabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthesis","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine formation","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine synthesis","type":"exact"},{"name":"ergothioneine anabolism","type":"exact"},{"name":"ergothioneine biosynthesis","type":"exact"},{"name":"ergothioneine formation","type":"exact"},{"name":"ergothioneine synthesis","type":"exact"}],"termid":"GO:0052699","terms_by_termid":{"GO:0052699":null,"GO:0140479":null}}


id: GO:0071082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the extracellular matrix protein tenascin.","definition_xrefs":["PMID:9565552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-tenascin complex","synonyms":[{"name":"ITGA9-ITGB1-TNC complex","type":"narrow"}],"termid":"GO:0071082"}


id: GO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling","synonyms":[{"name":"mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060497"}


id: PBO:0040751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2, pseudogene 1","termid":"PBO:0040751"}


id: PBO:0051206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-34","termid":"PBO:0051206"}


id: PBO:0079558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain containing 2","termid":"PBO:0079558"}


id: GO:0008993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate.","definition_xrefs":["EC:2.7.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rhamnulokinase activity","secondary_identifiers":["RHEA:20117","MetaCyc:RHAMNULOKIN-RXN"],"synonyms":[{"name":"ATP:L-rhamnulose 1-phosphotransferase activity","type":"related"},{"name":"L-rhamnulokinase activity","type":"related"},{"name":"L-rhamnulose kinase activity","type":"related"},{"name":"RhuK","type":"related"},{"name":"rhamnulokinase (phosphorylating)","type":"related"},{"name":"rhamnulose kinase activity","type":"related"}],"termid":"GO:0008993"}


id: GO:0102560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate + H2O = D-ribofuranose 2,5-bisphosphate + H+.","definition_xrefs":["EC:3.1.4.57","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"5-phospho-alpha-D-ribose 1,2-cyclic phosphate 1-phosphohydrolase activity","secondary_identifiers":["MetaCyc:RXN-14995","RHEA:41612"],"synonyms":[{"name":"phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase","type":"exact"}],"termid":"GO:0102560"}


id: GO:0035264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an entire multicellular organism, as opposed to cell growth.","definition_xrefs":["GOC:curators","GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism growth","synonyms":[{"name":"body growth","type":"related"}],"termid":"GO:0035264"}


id: PBO:0077207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 6 superfamily member 2","termid":"PBO:0077207"}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: PBO:0063769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2","termid":"PBO:0063769"}


id: PBO:0071478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 19","termid":"PBO:0071478"}


id: PBO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18c","termid":"PBO:0036354"}


id: PBO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Brx1 (predicted)","termid":"PBO:0003110"}


id: FYPO:0006321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is decreased.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"decreased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0006321"}


id: PR:Q9UTP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11H11.03c gene.","definition_xrefs":["UniProtKB:Q9UTP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C11H11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.03c","synonyms":[{"name":"Spom972h-SPAC11H11.03c","type":"exact"}],"termid":"PR:Q9UTP4"}


id: GO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:19909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-lactate dehydrogenase (cytochrome) activity","secondary_identifiers":["MetaCyc:L-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.1.2.3"],"synonyms":[{"name":"(S)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"L(+)-lactate:cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c oxidoreductase activity","type":"related"},{"name":"L-lactate cytochrome c reductase activity","type":"related"},{"name":"L-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"cytochrome b2","type":"related"},{"name":"cytochrome b2 (flavin-free derivative of flavocytochrome b2)","type":"related"},{"name":"dehydrogenase, lactate (cytochrome)","type":"related"},{"name":"flavocytochrome b2","type":"related"},{"name":"lactate dehydrogenase (cytochrome)","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"},{"name":"lactic cytochrome c reductase activity","type":"related"}],"termid":"GO:0004460"}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: PBO:0012577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 4 Pre6","termid":"PBO:0012577"}


id: GO:0017182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide metabolic process (obsolete GO:0017182)","synonyms":[{"name":"peptidyl-diphthamide metabolism","type":"exact"}],"termid":"GO:0017182"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: PBO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 6","termid":"PBO:0072068"}


id: GO:1905481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in mitotic DNA replication checkpoint.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:10523629"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in mitotic DNA replication checkpoint (obsolete GO:1905481)","termid":"GO:1905481"}


id: PBO:0075972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 antisense RNA","termid":"PBO:0075972"}


id: FYPO:0004834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to adenine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to adenine starvation","synonyms":[{"name":"increased phosphatase activity during adenine starvation","type":"exact"}],"termid":"FYPO:0004834"}


id: PBO:0058088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4305","termid":"PBO:0058088"}


id: GO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: actinomycin + H2O = actinomycinic monolactone.","definition_xrefs":["EC:3.1.1.39","MetaCyc:ACTINOMYCIN-LACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"actinomycin lactonase activity","synonyms":[{"name":"actinomycin lactonohydrolase activity","type":"related"}],"termid":"GO:0047615"}


id: PBO:0053501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 484","termid":"PBO:0053501"}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PBO:0072322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 8","termid":"PBO:0072322"}


id: PBO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOrphology Defective","termid":"PBO:0005595"}


id: PBO:0090498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta' subunit","termid":"PBO:0090498"}


id: GO:0097649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"A axonemal microtubule","synonyms":[{"name":"A tubule","type":"broad"}],"termid":"GO:0097649"}


id: PBO:0062757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 2","termid":"PBO:0062757"}


id: GO:0006081
data:
  {"annotated_genes":["SJAG_05256","SJAG_04263","SJAG_01543","SJAG_04404","SJAG_00501","SJAG_01432","SJAG_04192","SJAG_01383","SJAG_01457","SJAG_04726","SJAG_00070","SJAG_00707","SJAG_01881","SJAG_02988","SJAG_00281","SJAG_00691","SJAG_02960","SJAG_03934","SJAG_01596","SJAG_00252","SJAG_00283","SJAG_04674","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[99608,91677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[112468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[89259,89260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903189"},{"annotations":[101206,97152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[88589,96449,98924,84169,108936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[58904,101163,60501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[85122,92501,104557,109943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"},{"annotations":[95811,111802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110512,96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63452,83922,91636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00252":null,"SJAG_00281":null,"SJAG_00283":null,"SJAG_00501":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01596":null,"SJAG_01881":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular aldehyde metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde metabolism","type":"exact"},{"name":"alkanal metabolic process","type":"exact"},{"name":"alkanal metabolism","type":"exact"}],"termid":"GO:0006081","terms_by_termid":{"GO:0009052":null,"GO:0009436":null,"GO:0009443":null,"GO:0010144":null,"GO:0019243":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0046166":null,"GO:0046294":null,"GO:0061727":null,"GO:1903189":null}}


id: PBO:0089552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter","termid":"PBO:0089552"}


id: FYPO:0006785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cobalt","synonyms":[{"name":"normal cell population growth in presence of cobalt","type":"exact"},{"name":"normal cell population growth on cobalt","type":"exact"},{"name":"normal cell population growth on cobalt ion","type":"exact"},{"name":"normal cellular response to cobalt","type":"related"},{"name":"normal growth on cobalt ions","type":"exact"},{"name":"normal vegetative cell population growth on cobalt","type":"exact"}],"termid":"FYPO:0006785"}


id: PR:O14080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4,15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.15","synonyms":[{"name":"Spom972h-SPACUNK4.15","type":"exact"}],"termid":"PR:O14080"}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: GO:0019448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process","synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448"}


id: PBO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member C","termid":"PBO:0046908"}


id: GO:0002715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045845"],"synonyms":[{"name":"regulation of NK cell mediated immunity","type":"exact"},{"name":"regulation of natural killer cell activity","type":"related"}],"termid":"GO:0002715"}


id: PBO:0085108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear thiol peroxidase; functions as an alkyl-hydroperoxide reductase during post-diauxic growth","termid":"PBO:0085108"}


id: FYPO:0002037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased endodeoxyribonuclease activity","synonyms":[{"name":"reduced endodeoxyribonuclease activity","type":"exact"}],"termid":"FYPO:0002037"}


id: PR:O60078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tyr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.04c","synonyms":[{"name":"PRDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tyr1","type":"exact"}],"termid":"PR:O60078"}


id: PBO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 25","termid":"PBO:0050323"}


id: GO:0010905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"regulation of UDP-glucose catabolic process","termid":"GO:0010904"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"UDP-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0005975"],"is_obsolete":false,"name":"negative regulation of UDP-glucose catabolic process","synonyms":[{"name":"negative regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010905"}


id: GO:0098600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Selenomethionine + H2O => Methaneselenol + Ammonia + 2-oxobutanoic acid.","definition_xrefs":["PMID:16444005","PMID:16037612","PMID:11578145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"selenomethionine gamma-lyase activity","secondary_identifiers":["Reactome:R-HSA-2408537"],"termid":"GO:0098600"}


id: GO:0018484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzaldehyde + NAD+ + H2O = 4-hydroxybenzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:HYDROXYBENZALDEHYDE-OXIDATION-NAD-RXN","UM-BBD_reactionID:r0273","RHEA:20305"],"synonyms":[{"name":"3-hydroxybenzaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"p-hydroxybenzaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018484"}


id: PBO:0055124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2543","termid":"PBO:0055124"}


id: PBO:0058585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6718","termid":"PBO:0058585"}


id: GO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the optic lobe placode. In Drosophila, for example, the placode appears in the dorsolateral region of the head in late stage 11 embryos and is the precursor to the larval visual system.","definition_xrefs":["PMID:8402833","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"insect visual primordium development","termid":"GO:0001748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium formation","secondary_identifiers":["GO:0007457"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor formation","type":"exact"},{"name":"optic lobe placode formation","type":"exact"}],"termid":"GO:0001744"}


id: PBO:0038665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 3","termid":"PBO:0038665"}


id: GO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a renal interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast development","synonyms":[{"name":"kidney interstitial cell development","type":"exact"}],"termid":"GO:0072141"}


id: GO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability involved in acute inflammatory response","synonyms":[{"name":"regulation of vascular permeability during acute inflammatory response","type":"related"}],"termid":"GO:0002528"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:kom","PMID:15514116","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: GO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloid precursor protein metabolic process","termid":"GO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein catabolic process","synonyms":[{"name":"APP catabolic process","type":"exact"},{"name":"APP catabolism","type":"exact"},{"name":"amyloid precursor protein breakdown","type":"exact"},{"name":"amyloid precursor protein catabolism","type":"exact"},{"name":"amyloid precursor protein degradation","type":"exact"}],"termid":"GO:0042987"}


id: FYPO:0002548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4'-phosphopantothenate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 4'-phosphopantothenate level","synonyms":[{"name":"increased 4'-phosphopantothenate accumulation","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during vegetative growth","type":"exact"}],"termid":"FYPO:0002548"}


id: PBO:0080756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine dehydrogenase","termid":"PBO:0080756"}


id: PBO:0005040
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked myopathy with excessive autophagy","termid":"PBO:0005040"}


id: PBO:0056997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34c","termid":"PBO:0056997"}


id: PBO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.15","termid":"PBO:0001972"}


id: PBO:0068996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 240, pseudogene","termid":"PBO:0068996"}


id: PBO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease (predicted)","termid":"PBO:0000802"}


id: PBO:0058739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6863","termid":"PBO:0058739"}


id: PBO:0077143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 3","termid":"PBO:0077143"}


id: PBO:0061499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 1","termid":"PBO:0061499"}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: GO:0051962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"positively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system development","synonyms":[{"name":"activation of nervous system development","type":"narrow"},{"name":"stimulation of nervous system development","type":"narrow"},{"name":"up regulation of nervous system development","type":"exact"},{"name":"up-regulation of nervous system development","type":"exact"},{"name":"upregulation of nervous system development","type":"exact"}],"termid":"GO:0051962"}


id: PBO:0071858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 53","termid":"PBO:0071858"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: PBO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1298, pseudogene","termid":"PBO:0070002"}


id: MOD:01885
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a biotinyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"biotinylated residue","synonyms":[{"name":"5-((3aS,4S,6aR)-hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl)-1-oxopentyl","type":"exact"},{"name":"Biotinylation","type":"exact"},{"name":"BtnRes","type":"exact"}],"termid":"MOD:01885"}


id: PBO:0053990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1309","termid":"PBO:0053990"}


id: GO:0032549
data:
  {"annotated_genes":["SJAG_03578","SJAG_00637","SJAG_04410","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90236,94293,109271],"is_not":false,"summary":null,"term":"GO:0032549"},{"annotations":[111795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribonucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032549","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: FYPO:0007877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to a chemical stimulus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:34296454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of translation in response to chemical","synonyms":[{"name":"normal regulation of translation in response to chemical during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to chemical during vegetative growth","type":"exact"},{"name":"normal regulation of translation in response to chemical stimulus","type":"exact"},{"name":"normal translational regulation in response to chemical","type":"exact"}],"termid":"FYPO:0007877"}


id: GO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 1 (NOD1) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["GOC:add","PMID:17944960","PMID:18585455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"NOD1 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070427"}


id: PR:O74444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug122 gene.","definition_xrefs":["UniProtKB:O74444","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 122 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.15","synonyms":[{"name":"Spom972h-mug122","type":"exact"}],"termid":"PR:O74444"}


id: GO:1901074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GOC:TermGenie","PMID:19402756","GO:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of engulfment of apoptotic cell","synonyms":[{"name":"regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901074"}


id: PBO:0109637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like (pseudogene)","termid":"PBO:0109637"}


id: GO:0060294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of cilia mediated by motor proteins that contributes to the movement of a cell.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"part_of","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in cell motility","termid":"GO:0060294"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: PBO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN1 antisense RNA 1","termid":"PBO:0060824"}


id: GO:0141164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondrial protein quality control","termid":"GO:0141164"}


id: GO:0034647
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83590,92795,109190],"is_not":false,"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri, a di or a monomethyl-lysine residue at position 4 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:22473470","PMID:17550896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K4 demethylase activity","termid":"GO:0032453"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0032452","GO:0003824","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"histone H3K4me/H3K4me2/H3K4me3 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.11.67","RHEA:60208"],"synonyms":[{"name":"H3K4me3 demethylase activity","type":"related"},{"name":"histone H3-K4me2 demethylase activity","type":"broad"},{"name":"histone H3-K4me3 demethylase activity","type":"related"},{"name":"histone H3-tri/di/monomethyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone H3K4me2 demethylase activity","type":"broad"},{"name":"histone demethylase activity (H3-K4-me3 specific)","type":"exact"},{"name":"histone demethylase activity (H3-trimethyl-K4 specific)","type":"exact"}],"termid":"GO:0034647","terms_by_termid":{"GO:0034647":null}}


id: GO:0102167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acetyl-alpha-D-glucosaminyl-L-serine-[glycoprotein] = N-acetyl-alpha-D-glucosaminide + a [protein]-L-serine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity (obsolete GO:0102167)","termid":"GO:0102167"}


id: FYPO:0001380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear morphology during vegetative growth","synonyms":[{"name":"normal nuclear morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001380"}


id: PBO:0041456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 71","termid":"PBO:0041456"}


id: PBO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.33","termid":"PBO:0004496"}


id: GO:1900025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of substrate adhesion-dependent cell spreading","termid":"GO:1900024"},{"relation_name":"negatively_regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"down regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"down regulation of substrate adhesion dependent cell spreading","type":"exact"},{"name":"down regulation of substrate adhesion-dependent cell spreading","type":"related"},{"name":"negative regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"negative regulation of substrate adhesion dependent cell spreading","type":"exact"}],"termid":"GO:1900025"}


id: PBO:0011955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_mutation","termid":"PBO:0011955"}


id: PBO:0029965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029965"}


id: PR:O94497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C18E5.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.07","synonyms":[{"name":"Spom972h-SPBC18E5.07","type":"exact"}],"termid":"PR:O94497"}


id: GO:0099136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a non-reproductive fruiting body formed by aggregation of cells with different genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric colonial development","termid":"GO:0099135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}


id: PBO:0040113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3","termid":"PBO:0040113"}


id: SO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/Mature_transcript"],"synonyms":[{"name":"mature transcript","type":"exact"}],"termid":"SO:0000233"}


id: PBO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 1","termid":"PBO:0042531"}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: PBO:0040899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 2","termid":"PBO:0040899"}


id: GO:0044180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a unicellular organism grows in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a unicellular organism","termid":"GO:0044180"}


id: GO:0008469
data:
  {"annotated_genes":["SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100657],"is_not":false,"summary":null,"term":"GO:0008469"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.","definition_xrefs":["PMID:8002954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016741","GO:0008276"],"is_obsolete":false,"name":"histone arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016276"],"synonyms":[{"name":"S-adenosyl-L-methionine:histone-arginine nomega-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:histone-arginine omega-N-methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methylase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity","type":"exact"}],"termid":"GO:0008469","terms_by_termid":{"GO:0008469":null}}


id: FYPO:0007272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is decreased during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleoplasm during cellular response to DNA damage","synonyms":[{"name":"decreased protein localisation to nucleoplasm during cellular response to DNA damage","type":"exact"},{"name":"decreased protein localization to nucleoplasm during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleoplasm during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleoplasm during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007272"}


id: GO:0006565
data:
  {"annotated_genes":["SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99909],"is_not":false,"summary":null,"term":"GO:0006565"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-serine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SERDEG-PWY"],"synonyms":[{"name":"L-serine breakdown","type":"exact"},{"name":"L-serine catabolism","type":"exact"},{"name":"L-serine degradation","type":"exact"}],"termid":"GO:0006565","terms_by_termid":{"GO:0006565":null}}


id: PBO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family receptor 1","termid":"PBO:0051037"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0008063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Toll on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:go_curators","PMID:11135568","PMID:19126860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Toll signaling pathway","synonyms":[{"name":"Tl signaling pathway","type":"exact"},{"name":"Tl signalling pathway","type":"exact"},{"name":"Toll signalling pathway","type":"exact"}],"termid":"GO:0008063"}


id: FYPO:0000125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amiloride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to amiloride","synonyms":[{"name":"resistance to amiloride during mitotic cell cycle","type":"related"},{"name":"resistance to amiloride during vegetative growth","type":"exact"},{"name":"resistant to amiloride","type":"exact"}],"termid":"FYPO:0000125"}


id: SO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of aT-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_J_Gene","synonyms":[{"name":"T_cell_receptor_J_gene","type":"exact"}],"termid":"SO:0002136"}


id: FYECO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethanol","termid":"FYECO:0000212"}


id: PBO:0030743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylinositol-4-phosphate_level","termid":"PBO:0030743"}


id: PBO:0045316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 1","termid":"PBO:0045316"}


id: FYPO:0004572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which exocytosis occurs to a lower extent than normal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah","GO:0006887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal exocytosis during vegetative growth","termid":"FYPO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased exocytosis during vegetative growth","synonyms":[{"name":"decreased exocytosis during mitotic cell cycle","type":"related"},{"name":"reduced exocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0004572"}


id: PR:O94669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm3 gene.","definition_xrefs":["UniProtKB:O94669","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.11c","synonyms":[{"name":"Spom972h-apm3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit mu (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94669"}


id: FYPO:0004528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial translation phenotype","termid":"FYPO:0000632"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial translation","synonyms":[{"name":"abnormal mitochondrial protein biosynthesis","type":"exact"},{"name":"abnormal mitochondrial protein synthesis","type":"exact"},{"name":"abnormal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004528"}


id: FYPO:0003194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule stability during vegetative growth","type":"related"},{"name":"increased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"increased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"increased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"increased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0003194"}


id: PBO:0063583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET100 cytochrome c oxidase chaperone","termid":"PBO:0063583"}


id: GO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"}],"termid":"GO:0002814"}


id: PBO:0046427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B2","termid":"PBO:0046427"}


id: GO:1901445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to propan-1-ol","termid":"GO:1901445"}


id: GO:0008920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a lipopolysaccharide + ADP-L-glycero-beta-D-manno-heptose = a heptosylated lipopolysaccharide + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5061","MetaCyc:RXN0-5122","MetaCyc:RXN0-5127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lipopolysaccharide heptosyltransferase activity","synonyms":[{"name":"LPS heptosyltransferase activity","type":"exact"}],"termid":"GO:0008920"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["PomBase:mah","GO:0061572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: GO:1905760
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87529],"is_not":false,"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a post-anaphase array microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"post-anaphase array microtubule","termid":"GO:1905759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase array microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule end of microtubule of PAA","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubuli of PAA","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of microtubulus of PAA","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase array","type":"exact"},{"name":"microtubule end of microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"microtubule end of neurotubule of PAA","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase array","type":"narrow"},{"name":"microtubule end of neurotubule of post-anaphase microtubule array","type":"narrow"},{"name":"microtubule end of post-anaphase array microtubule","type":"exact"}],"termid":"GO:1905760","terms_by_termid":{"GO:1905760":null}}


id: GO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gemcitabine stimulus. Gemcitabine is a 2'-deoxycytidine having geminal fluoro substituents in the 2'-position, and is used as a drug in the treatment of various carcinomas.","definition_xrefs":["GOC:hp","Wikipedia:Gemcitabine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gemcitabine","synonyms":[{"name":"response to 2',2'-difluorodeoxycytidine","type":"exact"},{"name":"response to 2'-deoxy-2',2'-difluorocytidine","type":"exact"}],"termid":"GO:0036272"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: PBO:0049265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin D","termid":"PBO:0049265"}


id: PBO:0077458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184A","termid":"PBO:0077458"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: GO:0009576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a leucoplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast stroma","termid":"GO:0009576"}


id: GO:0008312
data:
  {"annotated_genes":["SJAG_01840","SJAG_01759","SJAG_02456","SJAG_03411","SJAG_03684","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86990,87772,110487,111244,112045,112758],"is_not":false,"summary":null,"term":"GO:0008312"}]},"cv_name":"molecular_function","definition":"Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP).","definition_xrefs":["PMID:6181418","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"7S RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008312","terms_by_termid":{"GO:0008312":null}}


id: PBO:0073795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 2","termid":"PBO:0073795"}


id: PBO:0041065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3","termid":"PBO:0041065"}


id: PBO:0074932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 99","termid":"PBO:0074932"}


id: PR:000027506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc25 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"CDC25","type":"related"},{"name":"MIH1","type":"related"},{"name":"Mitosis initiation protein","type":"exact"},{"name":"P80","type":"exact"},{"name":"cdc25","type":"exact"}],"termid":"PR:000027506"}


id: GO:0004413
data:
  {"annotated_genes":["SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106807],"is_not":false,"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + ATP = O-phospho-L-homoserine + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.39","RHEA:13985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03141":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"homoserine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOSERKIN-RXN","KEGG_REACTION:R01771"],"synonyms":[{"name":"ATP:L-homoserine O-phosphotransferase activity","type":"related"},{"name":"HSK","type":"related"},{"name":"homoserine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004413","terms_by_termid":{"GO:0004413":null}}


id: PBO:0087572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; facilities dissociation of the Ssl2p helices from TFIIH; expression levels regulated by Arg5,6p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087572"}


id: PBO:0046131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 1","termid":"PBO:0046131"}


id: GO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"carotene catabolic process","synonyms":[{"name":"carotene breakdown","type":"exact"},{"name":"carotene catabolism","type":"exact"},{"name":"carotene degradation","type":"exact"}],"termid":"GO:0016121"}


id: SO:1000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence variant at RNA level does not lead to any change in polypeptide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000089 sequence_variant_causing_no_change_of_translational_product (obsolete SO:1000089)","synonyms":[{"name":"mutation causing no change of translational product","type":"related"},{"name":"sequence variant causing no change of translational product","type":"exact"}],"termid":"SO:1000089"}


id: PBO:0068400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 217","termid":"PBO:0068400"}


id: PBO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 55","termid":"PBO:0070589"}


id: PBO:0055648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3088","termid":"PBO:0055648"}


id: PBO:0068625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 5, pseudogene","termid":"PBO:0068625"}


id: PBO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6 pseudogene 1","termid":"PBO:0047467"}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848939","PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: GO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an anatomical structure with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of anatomical structure orientation","termid":"GO:0048560"}


