# terms

id: PR:Q9USJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-mercaptopyruvate sulfurtransferase SseA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-mercaptopyruvate sulfurtransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.01","secondary_identifiers":["UniProtKB:Q9USJ1"],"synonyms":[{"name":"MST (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC4B3.01","type":"related"},{"name":"Spom972h-sseA","type":"exact"}],"termid":"PR:Q9USJ1"}


id: FYPO:0005491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole occurs to a lower extent than normal, and some of the protein is secreted, i.e. some of a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PMID:22484924","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"decreased maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"protein partially mislocalized from vacuole to extracellular region","type":"related"},{"name":"reduced maintenance of protein localization in vacuole, with protein secreted","type":"exact"}],"termid":"FYPO:0005491"}


id: PBO:0076249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 polycomb repressive complex 2 subunit","termid":"PBO:0076249"}


id: PBO:0043088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol induced regulator of metabolism RNA","termid":"PBO:0043088"}


id: GO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 7-alpha-hydroxycholesterol = NADH + H+ + 7-alpha-hydroxycholest-4-en-3-one.","definition_xrefs":["MetaCyc:1.1.1.181-RXN","EC:1.1.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity","secondary_identifiers":["RHEA:11896"],"synonyms":[{"name":"3-beta-hydroxy-Delta(5)-C(27)-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase activity","type":"related"},{"name":"cholest-5-ene-3beta,7alpha-diol:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047016"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PMID:30862564","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: MOD:00476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"galactosylated","termid":"MOD:00728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"galactosylated residue","synonyms":[{"name":"GalRes","type":"exact"}],"termid":"MOD:00476"}


id: PBO:0052944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated like protein 29-1","termid":"PBO:0052944"}


id: FYPO:0001970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on aculeacin A","termid":"FYPO:0001970"}


id: PBO:0064366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PML nuclear body scaffold","termid":"PBO:0064366"}


id: GO:0003677
data:
  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id: PR:Q9P3W5
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tel2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein tel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.03","synonyms":[{"name":"Spom972h-tel2","type":"exact"}],"termid":"PR:Q9P3W5"}


id: PBO:0028968
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_superoxide_dismutase_activity","termid":"PBO:0028968"}


id: GO:0036302
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.","definition_xrefs":["GOC:BHF","GOC:gr","PMID:14701881","UBERON:0002087","ZFA:0001315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal development","termid":"GO:0036302"}


id: GO:0009297
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a pilus, a short filamentous structure of bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:mcc2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pilus assembly","synonyms":[{"name":"fimbria assembly","type":"narrow"},{"name":"fimbria biogenesis","type":"related"},{"name":"fimbriae assembly","type":"narrow"},{"name":"fimbriae biogenesis","type":"related"},{"name":"fimbrial assembly","type":"narrow"},{"name":"fimbrium assembly","type":"narrow"},{"name":"fimbrium biogenesis","type":"related"},{"name":"pilus biogenesis","type":"related"},{"name":"pilus formation","type":"exact"}],"termid":"GO:0009297"}


id: GO:0042718
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-insoluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["GOC:jl","PMID:18046696","PMID:6337890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk granule","termid":"GO:0042718"}


id: RO:HOM0000016
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:non_functional_homolog_of"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_non_functional_homology_relationship_with","synonyms":[{"name":"non functional homologous to","type":"exact"},{"name":"pseudogene","type":"broad"}],"termid":"RO:HOM0000016"}


id: PBO:0033824
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex assembly protein Tom13 (predicted)","termid":"PBO:0033824"}


id: PBO:0091211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit ribosomal RNA","termid":"PBO:0091211"}


id: GO:0003942
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  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94301],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["EC:1.2.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:N-ACETYLGLUTPREDUCT-RXN","RHEA:21588"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: PBO:0061579
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM intronic transcript","termid":"PBO:0061579"}


id: PBO:0027724
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion_during_cellular_hypotonic_response","termid":"PBO:0027724"}


id: PBO:0083917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; negatively regulates Bnr1-mediated actin filament nucleation but not filament elongation; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0083917"}


id: GO:0033021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclopentanol.","definition_xrefs":["PMID:12406764","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclopentanol metabolic process","termid":"GO:0033020"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclopentanol biosynthetic process","synonyms":[{"name":"cyclopentanol anabolism","type":"exact"},{"name":"cyclopentanol biosynthesis","type":"exact"},{"name":"cyclopentanol formation","type":"exact"},{"name":"cyclopentanol synthesis","type":"exact"}],"termid":"GO:0033021"}


id: GO:0009516
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: GO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a protein cross-link.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-histidyl-L-tyrosine (obsolete GO:0018151)","termid":"GO:0018151"}


id: GO:0052245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052245)","synonyms":[{"name":"negative energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052245"}


id: PBO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 3","termid":"PBO:0072377"}


id: PBO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 16","termid":"PBO:0048095"}


id: PATO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-fertile","termid":"PATO:0001767"}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: GO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodermal-mesodermal cell signaling","termid":"GO:0003133"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling involved in heart induction","synonyms":[{"name":"endodermal-mesodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003134"}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["GOC:pad","PMID:25686248","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0086902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative tRNA acetyltransferase; RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA; protein abundance increases in response to DNA replication stress","termid":"PBO:0086902"}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: PBO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 3","termid":"PBO:0051931"}


id: PBO:0064390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 12","termid":"PBO:0064390"}


id: PBO:0064697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 33","termid":"PBO:0064697"}


id: GO:0120338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 3 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["PMID:348711799","PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 3","termid":"GO:0120335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke head 3","synonyms":[{"name":"radial spokehead 3","type":"exact"}],"termid":"GO:0120338"}


id: GO:0072448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G1 cell size control checkpoint (obsolete GO:0072448)","synonyms":[{"name":"detection of stimulus involved in mitotic cell cycle G1/S transition size control checkpoint","type":"related"},{"name":"mitotic cell cycle G1/S transition size control checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition size control checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition size control checkpoint","type":"related"}],"termid":"GO:0072448"}


id: PATO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharp","termid":"PATO:0001419"}


id: GO:0018739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA + H+.","definition_xrefs":["RHEA:11948","EC:3.1.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoyl-CoA thioesterase activity","secondary_identifiers":["MetaCyc:3.1.2.23-RXN","KEGG_REACTION:R01301","UM-BBD_reactionID:r0141"],"synonyms":[{"name":"4-hydroxybenzoyl-CoA hydrolase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA thiolesterase activity","type":"exact"}],"termid":"GO:0018739"}


id: GO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell differentiation","synonyms":[{"name":"activation of alpha-beta T cell differentiation","type":"narrow"},{"name":"positive regulation of alpha-beta T cell development","type":"related"},{"name":"positive regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of alpha-beta T cell differentiation","type":"narrow"},{"name":"up regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"up-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"upregulation of alpha-beta T cell differentiation","type":"exact"}],"termid":"GO:0046638"}


id: GO:0035505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin light chain kinase activity","termid":"GO:0035504"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myosin light chain kinase activity","termid":"GO:0035505"}


id: PBO:0080633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 1","termid":"PBO:0080633"}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: PR:000050480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the fin1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"SPAC19E9.02","type":"related"},{"name":"Spom-fin1","type":"exact"},{"name":"fin1","type":"related"}],"termid":"PR:000050480"}


id: PBO:0067453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 577, pseudogene","termid":"PBO:0067453"}


id: GO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve formation","synonyms":[{"name":"AV valve formation","type":"exact"}],"termid":"GO:0003190"}


id: FYPO:0006394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the meiotic spindle is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic spindle localization","synonyms":[{"name":"abnormal establishment of meiotic spindle localization","type":"exact"},{"name":"abnormal meiotic spindle localisation","type":"exact"},{"name":"abnormal spindle localization during meiosis","type":"exact"},{"name":"abnormal spindle localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006394"}


id: FYPO:0005568
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_04280":null},"genotype_count":2,"genotypes_by_uniquename":{"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell polarity","references_by_uniquename":{"PMID:30664646":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_00409"],"single_locus_genotype_uniquenames":["gpd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell polarity process","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity","type":"exact"},{"name":"cell polarity defects","type":"exact"}],"termid":"FYPO:0005568","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000198":null,"FYPO_EXT:0000001":null}}


id: PBO:0042059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC121 pseudogene 1","termid":"PBO:0042059"}


id: PBO:0079741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN7 antisense RNA 1","termid":"PBO:0079741"}


id: PBO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 42 pseudogene","termid":"PBO:0062092"}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: GO:0106328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","termid":"GO:0047224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.147"],"termid":"GO:0106328"}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: GO:0070578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.","definition_xrefs":["PMID:18178619","GOC:rph","GOC:ab","PMID:19820710","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RISC-loading complex","synonyms":[{"name":"RLC","type":"related"},{"name":"miRLC","type":"exact"},{"name":"microRNA loading complex","type":"exact"}],"termid":"GO:0070578"}


id: SO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 54 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma54_element","synonyms":[{"name":"<new synonym>","type":"related"},{"name":"bacterial RNA polymerase promoter sigma54","type":"exact"}],"termid":"SO:0001672"}


id: PBO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein (predicted)","termid":"PBO:0013450"}


id: PBO:0054760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2172","termid":"PBO:0054760"}


id: GO:0021556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GOC:dgh","ISBN:0582227089","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"central nervous system morphogenesis","termid":"GO:0021551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system formation","termid":"GO:0021556"}


id: GO:0046367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allose catabolic process","synonyms":[{"name":"allose breakdown","type":"exact"},{"name":"allose catabolism","type":"exact"},{"name":"allose degradation","type":"exact"}],"termid":"GO:0046367"}


id: PBO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymin related 1","termid":"PBO:0046411"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


id: PBO:0082504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of i-AAA protease complex; complex is located in mitochondrial inner membrane; responsible for degradation of unfolded or misfolded mitochondrial gene products; serves as nonconventional translocation motor to pull PNPase into intermembrane space; also has role in intermembrane space protein folding; mutation causes elevated rate of mitochondrial turnover; human homolog YME1L1 can complement yeast null mutant","termid":"PBO:0082504"}


id: PBO:0044513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYYR1 antisense RNA 1","termid":"PBO:0044513"}


id: PBO:0059896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 19","termid":"PBO:0059896"}


id: PBO:0060003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 23","termid":"PBO:0060003"}


id: PBO:0079287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 6","termid":"PBO:0079287"}


id: GO:0102105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloylacetyl-CoA + 4-coumaryl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["RHEA:35139","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity from feruloylacetyl-CoA","secondary_identifiers":["MetaCyc:RXN-11225","EC:2.3.1.219"],"termid":"GO:0102105"}


id: GO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleation","termid":"GO:0090601"}


id: PBO:0082833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; binds RNA via its C-terminal domain; homologous to mammalian Bop1","termid":"PBO:0082833"}


id: PBO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 7","termid":"PBO:0061215"}


id: GO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"},{"relation_name":"part_of","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"cytotoxic T cell degranulation","synonyms":[{"name":"cytotoxic T cell granule exocytosis","type":"exact"},{"name":"cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"cytotoxic T-cell degranulation","type":"exact"},{"name":"cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043316"}


id: GO:0015164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucuronosides from one side of a membrane to the other. Glucuronosides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of glucuronate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucuronoside transmembrane transporter activity","synonyms":[{"name":"glucuronide transporter activity","type":"exact"}],"termid":"GO:0015164"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H+ + phosphate.","definition_xrefs":["PMID:32747782","Rhea:60148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: PBO:0027824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_mitotic_spindle","termid":"PBO:0027824"}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: PBO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric","termid":"PBO:0001467"}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: PR:G2TRT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.18 gene.","definition_xrefs":["UniProtKB:G2TRT8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.18","synonyms":[{"name":"Spom972h-SPCC1235.18","type":"exact"}],"termid":"PR:G2TRT8"}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: PATO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bend or hang downwards due to loss of water","direct_ancestors":[{"relation_name":"is_a","term_name":"drooping","termid":"PATO:0002165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wilty","termid":"PATO:0002461"}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PBO:0080418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 2","termid":"PBO:0080418"}


id: PBO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit Kei1 (predicted)","termid":"PBO:0002390"}


id: GO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell apoptotic process","synonyms":[{"name":"activation of glial cell apoptosis","type":"narrow"},{"name":"positive regulation of glial cell apoptosis","type":"narrow"},{"name":"stimulation of glial cell apoptosis","type":"narrow"},{"name":"up regulation of glial cell apoptosis","type":"exact"},{"name":"up-regulation of glial cell apoptosis","type":"exact"},{"name":"upregulation of glial cell apoptosis","type":"exact"}],"termid":"GO:0034352"}


id: GO:1904936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an interneuron from one site to another.","definition_xrefs":["GO_REF:0000091","GOC:TermGenie","GOC:ah","PMID:18622031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron migration","synonyms":[{"name":"inter neuron migration","type":"exact"},{"name":"inter-neuron migration","type":"exact"}],"termid":"GO:1904936"}


id: SO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a premature stop codon, leading to a shortened polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained","secondary_identifiers":["http://ensembl.org/info/genome/variation/prediction/predicted_data.html","http://vat.gersteinlab.org/formats.php","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","loinc:LA6699-8","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:stopgain","type":"exact"},{"name":"Jannovar:stop_gained","type":"exact"},{"name":"Seattleseq:stop-gained","type":"exact"},{"name":"Seattleseq:stop-gained-near-splice","type":"related"},{"name":"VAAST:stop_gained","type":"exact"},{"name":"VAT:prematureStop","type":"exact"},{"name":"VEP:stop_gained","type":"exact"},{"name":"nonsense","type":"exact"},{"name":"nonsense codon","type":"exact"},{"name":"snpEff:STOP_GAINED","type":"exact"},{"name":"stop codon gained","type":"related"},{"name":"stop gained","type":"exact"}],"termid":"SO:0001587"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: PBO:0027610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-replication_origin_firing_during_mitotic_G2_phase","termid":"PBO:0027610"}


id: GO:0032870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hormone stimulus","termid":"GO:0032870"}


id: GO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the spontaneous (nonenzymatic) formation of crystals in a solution, for example, calcium oxalate crystals in urine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of crystal formation (obsolete GO:0046908)","synonyms":[{"name":"negative regulation of crystal formation","type":"exact"},{"name":"negative regulation of mineralization","type":"related"}],"termid":"GO:0046908"}


id: PBO:0057505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 623","termid":"PBO:0057505"}


id: PBO:0088007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C serine/threonine protein phosphatase (PP2C); alternatively spliced to create two mRNA isoforms; protein from spliced form localizes to the mitochondria while the one from the unspliced form is localized to the nuclear envelope; activates coenzyme Q6 biosynthesis by dephosphorylation of demethoxy-Q6 hydroxylase Coq7p","termid":"PBO:0088007"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115156,115157,115160,115164,115169,115172],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PomBase:mah","PMID:22156749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_02763","SJAG_01906"],"single_locus_genotype_uniquenames":["ned1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: GO:0000722
data:
  {"annotated_genes":["SJAG_00640","SJAG_06597","SJAG_01677","SJAG_06642","SJAG_02079","SJAG_05105","SJAG_05353","SJAG_05173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85351,88869,88870,88871,88872,92316,107861,109069,109070,109071,109072,109073],"is_not":false,"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"Any recombinational process that contributes to the maintenance of proper telomeric length.","definition_xrefs":["PMID:11850777","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200","GO:0006310"],"is_obsolete":false,"name":"telomere maintenance via recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase-independent telomere maintenance","type":"related"}],"termid":"GO:0000722","terms_by_termid":{"GO:0000722":null}}


id: PBO:0043238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Kb","termid":"PBO:0043238"}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: PBO:0087865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the basic leucine zipper (bZIP) family; required for transcription of genes involved in resistance to arsenic compounds; directly binds trivalent arsenic (As(III)) as does K. lactis ortholog, KIYAP8","termid":"PBO:0087865"}


id: PBO:0031443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_vegetative_growth","termid":"PBO:0031443"}


id: GO:1990452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex containing Parkin (PARK2), the F-box protein FBXW7 (also called SEL-10) and a cullin from the Cul1 subfamily; substrate specificity is conferred by the F-box protein.","definition_xrefs":["GOC:PARL","PMID:12628165","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Parkin-FBXW7-Cul1 ubiquitin ligase complex","synonyms":[{"name":"PRKN-FBXW7-Cul1 complex","type":"exact"},{"name":"Park2-FBXW7-Cul1 complex","type":"exact"},{"name":"Parkin-FBXW7-Cul1 protein complex","type":"exact"},{"name":"Parkin-HSel-10-Cullin-1 complex","type":"narrow"},{"name":"Parkin/Cul1/F-box protein complex","type":"exact"}],"termid":"GO:1990452"}


id: GO:0010899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"}


id: PBO:0055427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2857","termid":"PBO:0055427"}


id: PBO:0034678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034678"}


id: PBO:0078895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 6-1","termid":"PBO:0078895"}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: PBO:0066574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group D antigen","termid":"PBO:0066574"}


id: PBO:0045290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 41","termid":"PBO:0045290"}


id: GO:1901913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of capsule organization","synonyms":[{"name":"regulation of capsule organisation","type":"exact"},{"name":"regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901913"}


id: GO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of alpha-beta T cell development","type":"related"},{"name":"negative regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046639"}


id: GO:0052860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + 2-oxoglutarate + O2 = 3-epihydroxy-2'-deoxymugineic acid + succinate + CO2.","definition_xrefs":["EC:1.14.11.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2'-deoxymugineic-acid 3-dioxygenase activity","secondary_identifiers":["RHEA:20065","KEGG_REACTION:R07187","MetaCyc:RXN-7983"],"synonyms":[{"name":"2'-deoxymugineic acid,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"}],"termid":"GO:0052860"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: GO:0106289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106289"}


id: GO:0032774
data:
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id: PBO:0046358
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id: PBO:0068107
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 414","termid":"PBO:0068107"}


id: PBO:0047551
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 9","termid":"PBO:0047551"}


id: PR:Q10300
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.06c gene.","definition_xrefs":["UniProtKB:Q10300","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.06c","synonyms":[{"name":"Spom972h-SPAC22H10.06c","type":"exact"}],"termid":"PR:Q10300"}


id: PBO:0075993
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP1B antisense RNA 1","termid":"PBO:0075993"}


id: PBO:0004282
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: PBO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 10","termid":"PBO:0052463"}


id: PBO:0041869
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 1","termid":"PBO:0041869"}


id: GO:0046773
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation termination of host mRNAs. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation termination","synonyms":[{"name":"suppression by virus of host translation termination","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthesis","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthetic process","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthesis","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthetic process","type":"narrow"}],"termid":"GO:0046773"}


id: GO:0071381
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin F stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin F","termid":"GO:0034696"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin F stimulus","termid":"GO:0071381"}


id: PBO:0030291
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glucose_carbon_source","termid":"PBO:0030291"}


id: FYECO:0000437
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  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the auxin analogue 5-adamantyl-IAA was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 5IAA","secondary_identifiers":["PMID:37783794"],"synonyms":[{"name":"5-adamantyl-IAA","type":"exact"}],"termid":"FYECO:0000437"}


id: GO:1901146
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in mesonephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}


id: PBO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.54","termid":"PBO:0000382"}


id: PBO:0066875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 175","termid":"PBO:0066875"}


id: PBO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSS1 like protein","termid":"PBO:0034709"}


id: PBO:0027850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity","termid":"PBO:0027850"}


id: PBO:0080518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 4, pseudogene","termid":"PBO:0080518"}


id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:15196554","PMID:14744438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: PBO:0043455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 1","termid":"PBO:0043455"}


id: PBO:0109618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal like (pseudogene)","termid":"PBO:0109618"}


id: PBO:0064632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 alpha","termid":"PBO:0064632"}


id: PR:P87159
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor nif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.04c","synonyms":[{"name":"Spom972h-nif1","type":"exact"},{"name":"nim1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87159"}


id: GO:1905602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular cholesterol transport","termid":"GO:0032385"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:1905600"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"activation of receptor-mediated endocytosis involved in cholesterol transport","type":"narrow"},{"name":"activation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905602"}


id: GO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host immune response (obsolete GO:0052559)","synonyms":[{"name":"activation by symbiont of host immune response","type":"exact"},{"name":"induction by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host immune response","type":"related"},{"name":"stimulation by symbiont of host immune response","type":"related"},{"name":"up regulation by symbiont of host immune response","type":"related"},{"name":"up-regulation by symbiont of host immune response","type":"related"},{"name":"upregulation by symbiont of host immune response","type":"exact"}],"termid":"GO:0052559"}


id: GO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to decrease the ability of the receptor agonist to bind and activate the receptor.","definition_xrefs":["ISBN:0198506732","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor inhibitor activity","termid":"GO:0030547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"receptor antagonist activity","synonyms":[{"name":"receptor ligand activity","type":"broad"}],"termid":"GO:0048019"}


id: FYPO:0007379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"T-shaped cell","termid":"FYPO:0005566"},{"relation_name":"output_of","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005568","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"T-shaped vegetative cell","synonyms":[{"name":"T-shaped cell during vegetative growth","type":"exact"},{"name":"T-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007379"}


id: PR:Q10204
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- acr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor RRN9 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.04","synonyms":[{"name":"Spom972h-acr1","type":"exact"},{"name":"accumulation of condensin at rDNA protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10204"}


id: PBO:0087127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein; part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP involved in mRNA splicing, similar to human 15.5K protein","termid":"PBO:0087127"}


id: GO:1990776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["PMID:22982863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to angiotensin","termid":"GO:1990776"}


id: FYPO:0005458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to non-ionic osmotic stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"decreased cellular glycerol level during cellular response to sorbitol","type":"related"},{"name":"decreased glycerol accumulation during cellular response to non-ionic osmotic stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0005458"}


id: GO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol kinase activity (obsolete GO:0004428)","synonyms":[{"name":"inositol or phosphatidylinositol kinase activity","type":"exact"},{"name":"inositol/phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0004428"}


id: PBO:0053683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 870","termid":"PBO:0053683"}


id: GO:0048489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles.","definition_xrefs":["GOC:pr","GOC:bc","GOC:jid","GOC:aruk","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"is_a","term_name":"synaptic vesicle localization","termid":"GO:0097479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle transport","secondary_identifiers":["GO:0016181"],"synonyms":[{"name":"synaptic vesicle fission","type":"related"},{"name":"synaptic vesicle fusion","type":"related"},{"name":"synaptic vesicle trafficking","type":"related"}],"termid":"GO:0048489"}


id: GO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast organization","synonyms":[{"name":"chloroplast organisation","type":"exact"},{"name":"chloroplast organization and biogenesis","type":"related"}],"termid":"GO:0009658"}


id: PBO:0054745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2154","termid":"PBO:0054745"}


id: PBO:0054935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2349","termid":"PBO:0054935"}


id: PBO:0063836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase interacting protein like","termid":"PBO:0063836"}


id: PR:Q9Y7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C191.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.04c","synonyms":[{"name":"Spom972h-SPCC191.04c","type":"exact"}],"termid":"PR:Q9Y7P8"}


id: GO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of nitric oxide biosynthetic process","termid":"GO:0045428"},{"relation_name":"is_a","term_name":"negative regulation of nitric oxide metabolic process","termid":"GO:1904406"},{"relation_name":"negatively_regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide biosynthetic process","synonyms":[{"name":"down regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"down-regulation of nitric oxide biosynthetic process","type":"exact"},{"name":"downregulation of nitric oxide biosynthetic process","type":"exact"},{"name":"inhibition of nitric oxide biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric oxide anabolism","type":"exact"},{"name":"negative regulation of nitric oxide biosynthesis","type":"exact"},{"name":"negative regulation of nitric oxide formation","type":"exact"},{"name":"negative regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045019"}


id: GO:0032200
data:
  {"annotated_genes":["SJAG_03685","SJAG_05105","SJAG_00640","SJAG_04863","SJAG_01677","SJAG_03844","SJAG_01864","SJAG_00756","SJAG_04586","SJAG_00939","SJAG_03092","SJAG_03843","SJAG_06597","SJAG_02116","SJAG_00934","SJAG_03916","SJAG_03982","SJAG_05372","SJAG_05173","SJAG_02119","SJAG_01777","SJAG_03722","SJAG_03624","SJAG_04245","SJAG_00429","SJAG_01410","SJAG_04372","SJAG_03855","SJAG_05979","SJAG_06642","SJAG_01832","SJAG_00676","SJAG_02362","SJAG_01068","SJAG_02563","SJAG_02212","SJAG_01605","SJAG_01540","SJAG_03780","SJAG_02778","SJAG_03680","SJAG_04183","SJAG_00559","SJAG_05353","SJAG_02079","SJAG_01263","SJAG_04039","SJAG_05373","SJAG_03026","SJAG_04150","SJAG_02409","SJAG_01377","SJAG_02194","SJAG_01378","SJAG_03720","SJAG_00364","SJAG_01579","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87980,102075],"is_not":false,"summary":null,"term":"GO:0032200"},{"annotations":[93332],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[101223,85938],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031848"},{"annotations":[91228],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[86227,114883,100224,110117,88222,108239,84622,92873,104296,113781,109803,87424,109425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031509"},{"annotations":[95840,110723,87978,112058,106503,101224,91229,85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[105516,104169,112961,85301,85350,102263,85940,104066,102749,110405,107679,103893,107076,87579,95849,88675,96982,102074,100286,95318,107859,107860,105695,112353,107657,95196,84742,87979,95841,108954,112372,101225,108650,92315,91230,106504,112059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[109071,88870,85351,109072,109073,88871,109069,107861,109070,88872,92316,88869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[86806,104253,85352,104067,95842,86805,112060,107680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[101226,102264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[112061,95843,104254],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":58,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02119":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02409":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_02778":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03844":null,"SJAG_03855":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04039":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telomere organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome organization, telomeric","type":"exact"},{"name":"organization of chromosome, telomeric region","type":"exact"},{"name":"telomere organisation","type":"exact"},{"name":"telomere organization and biogenesis","type":"related"}],"termid":"GO:0032200","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031509":null,"GO:0031848":null,"GO:0032200":null,"GO:0032210":null,"GO:0032215":null,"GO:1905324":null}}


id: PBO:0040555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8","termid":"PBO:0040555"}


id: PBO:0054855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2269","termid":"PBO:0054855"}


id: GO:1904631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucoside stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16842873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucoside","synonyms":[{"name":"response to glucosides","type":"exact"}],"termid":"GO:1904631"}


id: PBO:0055794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 3","termid":"PBO:0055794"}


id: PBO:0046585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 27","termid":"PBO:0046585"}


id: PBO:0057459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 578","termid":"PBO:0057459"}


id: PBO:0077921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 12","termid":"PBO:0077921"}


id: PBO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 21","termid":"PBO:0048070"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10381407","PMID:10334994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["kegg.module:M00893","MetaCyc:PWY-7535"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: GO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-26 production","termid":"GO:0032670"},{"relation_name":"negatively_regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-26 production","secondary_identifiers":["GO:0045534"],"synonyms":[{"name":"down regulation of interleukin-26 production","type":"exact"},{"name":"down-regulation of interleukin-26 production","type":"exact"},{"name":"downregulation of interleukin-26 production","type":"exact"},{"name":"inhibition of interleukin-26 production","type":"narrow"},{"name":"negative regulation of IL-26 production","type":"exact"},{"name":"negative regulation of interleukin-26 biosynthetic process","type":"narrow"}],"termid":"GO:0032710"}


id: PBO:0071707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 5","termid":"PBO:0071707"}


id: PBO:0091951
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human protein phosphatase B' delta","termid":"PBO:0091951"}


id: PBO:0069294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 550, pseudogene","termid":"PBO:0069294"}


id: PBO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member B","termid":"PBO:0047100"}


id: SO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Site which has been experimentally altered.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mutated_variant_site","secondary_identifiers":["BS:00036"],"synonyms":[{"name":"mutagen","type":"exact"},{"name":"mutagenesis","type":"exact"},{"name":"mutated_site","type":"exact"}],"termid":"SO:0001148"}


id: PBO:0005500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmj4 protein (predicted)","termid":"PBO:0005500"}


id: PBO:0050673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8","termid":"PBO:0050673"}


id: PBO:0065184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich 2","termid":"PBO:0065184"}


id: PBO:0069656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 933, pseudogene","termid":"PBO:0069656"}


id: PBO:0030675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septation_index","termid":"PBO:0030675"}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: PBO:0004545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family","termid":"PBO:0004545"}


id: GO:0018958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"carbolic acid metabolic process","type":"exact"},{"name":"carbolic acid metabolism","type":"exact"},{"name":"hydroxybenzene metabolic process","type":"exact"},{"name":"hydroxybenzene metabolism","type":"exact"},{"name":"phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0018958"}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_03598","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[98007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["EC:5.3.3.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: FYPO:0003307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is higher than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:22684255","PomBase:mah","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mitotic index","termid":"FYPO:0003307"}


id: PBO:0044025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 beta","termid":"PBO:0044025"}


id: GO:0009922
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85676,88092],"is_not":false,"summary":null,"term":"GO:0009922"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain acyl-CoA + H+ + malonyl-CoA = a very-long-chain 3-oxoacyl-CoA + CO2 + CoA. This reaction is the first (condensation) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:16564093","PMID:19763486","RHEA:32727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"fatty acid elongase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2046083","EC:2.3.1.199","Reactome:R-HSA-2046088","Reactome:R-HSA-2046100","Reactome:R-HSA-548814","Reactome:R-HSA-548815","Reactome:R-HSA-548800","Reactome:R-HSA-548830","MetaCyc:RXN-7697","Reactome:R-HSA-2046094","Reactome:R-HSA-2046095","Reactome:R-HSA-2046090"],"synonyms":[{"name":"ELOVL","type":"exact"},{"name":"condensing enzyme","type":"broad"},{"name":"elongation of very long chain fatty acids activity","type":"exact"},{"name":"very-long-chain 3-ketoacyl-CoA synthase","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase","type":"exact"},{"name":"very-long-chain beta-ketoacyl-CoA synthase","type":"exact"}],"termid":"GO:0009922","terms_by_termid":{"GO:0009922":null}}


id: GO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"regulation of NK cell differentiation during immune response","type":"related"},{"name":"regulation of natural killer cell development involved in immune response","type":"related"},{"name":"regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032826"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: GO:0050738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fructosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"fructosyltransferase activity","termid":"GO:0050738"}


id: GO:0034708
data:
  {"annotated_genes":["SJAG_02768","SJAG_01540","SJAG_02386","SJAG_01325","SJAG_02329","SJAG_03680","SJAG_03949","SJAG_04890","SJAG_04848","SJAG_04181","SJAG_02637","SJAG_04574","SJAG_02170","SJAG_00341","SJAG_00769","SJAG_04680","SJAG_03431","SJAG_07011","SJAG_00896","SJAG_00756","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113772,92863,114874,110110,106613,90481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[92617,92349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[90317,99246,86873,101748,112650,113626,105482,111809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[97091,108277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[92351,100264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111818,115051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses methyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_03949":null,"SJAG_04181":null,"SJAG_04574":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034708","terms_by_termid":{"GO:0031515":null,"GO:0035657":null,"GO:0043494":null,"GO:0043528":null,"GO:0048188":null,"GO:0106143":null}}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: GO:0019826
data:
  {"annotated_genes":["SJAG_00642","SJAG_03828","SJAG_02945","SJAG_06621","SJAG_06622","SJAG_02135","SJAG_03903","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105101,105102,105103,105104,105105,105106,105107,107843],"is_not":false,"summary":null,"term":"GO:0019826"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of oxygen (O2).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00642":null,"SJAG_02135":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"oxygen sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019826","terms_by_termid":{"GO:0019826":null}}


id: PBO:0014245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family double bromodomain protein Brf2","termid":"PBO:0014245"}


id: GO:0045754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of acetate catabolic process","synonyms":[{"name":"activation of acetate catabolic process","type":"narrow"},{"name":"positive regulation of acetate breakdown","type":"exact"},{"name":"positive regulation of acetate catabolism","type":"exact"},{"name":"positive regulation of acetate degradation","type":"exact"},{"name":"stimulation of acetate catabolic process","type":"narrow"},{"name":"up regulation of acetate catabolic process","type":"exact"},{"name":"up-regulation of acetate catabolic process","type":"exact"},{"name":"upregulation of acetate catabolic process","type":"exact"}],"termid":"GO:0045754"}


id: GO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epinephrine binding","synonyms":[{"name":"adrenaline binding","type":"exact"}],"termid":"GO:0051379"}


id: PR:O74475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.02c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs4","type":"exact"}],"termid":"PR:O74475"}


id: PBO:0061242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 3","termid":"PBO:0061242"}


id: PBO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0017022"}


id: GO:1902651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GOC:di","GO_REF:0000058","GOC:TermGenie","PMID:22199252"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2A-H2B dimer displacement (obsolete GO:1902651)","synonyms":[{"name":"activation of histone H2A-H2B dimer displacement","type":"narrow"},{"name":"up regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"up-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"upregulation of histone H2A-H2B dimer displacement","type":"exact"}],"termid":"GO:1902651"}


id: PBO:0060514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 2","termid":"PBO:0060514"}


id: PBO:0071826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 21","termid":"PBO:0071826"}


id: PBO:0063707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2","termid":"PBO:0063707"}


id: PBO:0025451
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hypercholesterolemia","termid":"PBO:0025451"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: PR:P22774-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-1.","definition_xrefs":["UniProtKB:P22774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Long (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-1"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Long","type":"exact"},{"name":"heat shock 70 kDa protein, mitochondrial isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22774-1"}


id: PBO:0045209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C4","termid":"PBO:0045209"}


id: GO:0032489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"regulates","term_name":"Cdc42 protein signal transduction","termid":"GO:0032488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Cdc42 protein signal transduction","termid":"GO:0032489"}


id: PBO:0039239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated leukocyte cell adhesion molecule","termid":"PBO:0039239"}


id: PBO:0065502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1","termid":"PBO:0065502"}


id: PBO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 6","termid":"PBO:0060437"}


id: GO:0099567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of free calcium ion concentration in the postsynaptic cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in postsynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"postsynaptic calcium ion buffering","type":"exact"},{"name":"regulation of postsynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"related"}],"termid":"GO:0099567"}


id: PBO:0087175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B32; forms dissociable heterodimer with Rpb7p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNAPII complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087175"}


id: FYPO:0002460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002477"],"synonyms":[{"name":"viable branched curved cell","type":"exact"},{"name":"viable branched, curved cell during vegetative growth","type":"exact"},{"name":"viable branched, curved septated cell","type":"exact"},{"name":"viable branched, curved vegetative cell","type":"exact"},{"name":"viable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, curved septated cell","type":"exact"},{"name":"viable branched, long, curved, septated cell","type":"exact"},{"name":"viable curved branched cell","type":"exact"},{"name":"viable elongated branched curved cell","type":"exact"}],"termid":"FYPO:0002460"}


id: PBO:0028880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination","termid":"PBO:0028880"}


id: PBO:0012555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orp3","termid":"PBO:0012555"}


id: GO:0016529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.","definition_xrefs":["ISBN:0198547684","GOC:mtg_muscle","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"sarcoplasmic reticulum","secondary_identifiers":["Wikipedia:Endoplasmic_reticulum#Sarcoplasmic_reticulum","GO:0008221"],"termid":"GO:0016529"}


id: PBO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A3, pseudogene","termid":"PBO:0047028"}


id: GO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains the lin-9, lin-35, lin-37, lin-52, lin-53, lin-5is involved in 4-, dpl-1 and efl-1 proteins, and is involved in cell fate specification.","definition_xrefs":["PMID:17075059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"DRM complex","synonyms":[{"name":"DP/Rb/MuvB","type":"exact"}],"termid":"GO:0070176"}


id: GO:0097118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"postsynaptic membrane assembly","termid":"GO:0097104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"neuroligin clustering involved in postsynaptic membrane assembly","synonyms":[{"name":"Nlgn clustering","type":"broad"},{"name":"neuroligin clustering","type":"broad"},{"name":"postsynaptic neuroligin clustering","type":"exact"}],"termid":"GO:0097118"}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: PBO:0042955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9","termid":"PBO:0042955"}


id: PBO:0049000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 2","termid":"PBO:0049000"}


id: PR:O14289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.03","synonyms":[{"name":"IPMI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-leu2","type":"exact"},{"name":"alpha-IPM isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"isopropylmalate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14289"}


id: GO:0071010
data:
  {"annotated_genes":["SJAG_03995","SJAG_04911","SJAG_02185","SJAG_01008","SJAG_02558","SJAG_04318","SJAG_00911","SJAG_00147","SJAG_00577","SJAG_01870","SJAG_00504","SJAG_03547","SJAG_00474","SJAG_04163","SJAG_03210","SJAG_04214","SJAG_00249","SJAG_02304","SJAG_02279","SJAG_00498","SJAG_05009","SJAG_00058","SJAG_05240","SJAG_01654","SJAG_03983","SJAG_00322","SJAG_03469","SJAG_01301","SJAG_00225","SJAG_00809","SJAG_00859","SJAG_02844"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92466,97369,97867,91474,101992,102888,109404,109979,91745,91059,87707,89511,111359,104897,84709,98671,106789,91316,114786,108780,89182,112518,102523,101638,99339,106761,106779,103068,105641,93973,106186,108494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site and the branch point sequence with specific snRNPs. The prespliceosome includes many proteins in addition to those found in the bound snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation. Prespliceosome complexes are not active for splicing, but are instead an early step in the assembly of a spliceosomal complex.","definition_xrefs":["GOC:ab","GOC:mah","GOC:krc","PMID:19239890","PMID:17332742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"prespliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex A","type":"narrow"},{"name":"prespliceosomal complex","type":"exact"},{"name":"yeast spliceosomal complex B","type":"narrow"}],"termid":"GO:0071010","terms_by_termid":{"GO:0071004":null}}


id: PBO:0067541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 687, pseudogene","termid":"PBO:0067541"}


id: PBO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031469"}


id: PBO:0066406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA divergent transcript","termid":"PBO:0066406"}


id: FYPO:0004401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5926.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on KT5926","synonyms":[{"name":"normal cell population growth in presence of KT5926","type":"exact"},{"name":"normal cell population growth on KT5926","type":"exact"},{"name":"normal cellular response to KT5926","type":"related"},{"name":"normal vegetative cell population growth on KT5926","type":"exact"}],"termid":"FYPO:0004401"}


id: GO:0031976
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any thylakoid within a plastid.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid","termid":"GO:0031976"}


id: PBO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036113"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: PBO:0057580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 877","termid":"PBO:0057580"}


id: PR:000049732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen ubiquitinated form that has K63-linked Ub-Ub in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000049733.","definition_xrefs":["PMID:27151298","PRO:CNA","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63diUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-diubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63diUbiq+","type":"exact"},{"name":"pcn1/K63diUbiq(K164)","type":"exact"}],"termid":"PR:000049732"}


id: PBO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 alpha subunit","termid":"PBO:0001911"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: PBO:0081347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 155","termid":"PBO:0081347"}


id: PBO:0031587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_phenotype","termid":"PBO:0031587"}


id: GO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BLOC-2 complex, a protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules.","definition_xrefs":["GOC:PARL","PMID:22511774","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BLOC-2 complex binding","termid":"GO:0036461"}


id: PBO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 4","termid":"PBO:0043196"}


id: PBO:0038970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2a receptor","termid":"PBO:0038970"}


id: PBO:0089076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1","termid":"PBO:0089076"}


id: PBO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any1","termid":"PBO:0016085"}


id: FYPO:0004459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more translation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of translation gene mRNA during nitrogen starvation","synonyms":[{"name":"increased level of translation gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of translation gene transcripts nitrogen starvation","type":"exact"},{"name":"increased translation gene mRNA accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004459"}


id: SO:1000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a decrease in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000086 sequence_variation_decreasing_level_of_transcript (obsolete SO:1000086)","synonyms":[{"name":"mutation decreasing level of transcript","type":"exact"},{"name":"sequence variation decreasing level of transcript","type":"related"}],"termid":"SO:1000086"}


id: FYECO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leptomycin B (LMB) was added to the medium or assay buffer. LMB inhibits the nuclear export receptor Crm1.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ LMB","synonyms":[{"name":"+ leptomycin B","type":"exact"}],"termid":"FYECO:0000243"}


id: PBO:0017991
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift at base 1339","termid":"PBO:0017991"}


id: PBO:0061806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 3 like 2","termid":"PBO:0061806"}


id: GO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002306"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: PBO:0075479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 7","termid":"PBO:0075479"}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: PBO:0056380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK10 antisense RNA 1","termid":"PBO:0056380"}


id: PBO:0083086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding component of the SBF complex (Swi4p-Swi6p); a transcriptional activator that in concert with MBF (Mbp1-Swi6p) regulates late G1-specific transcription of targets including cyclins and genes required for DNA synthesis and repair; Slt2p-independent regulator of cold growth; acetylation at two sites, K1016 and K1066, regulates interaction with Swi6p","termid":"PBO:0083086"}


id: PBO:0081189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 2","termid":"PBO:0081189"}


id: GO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex alpha subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alpha-catenin binding","termid":"GO:0045294"}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PBO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 10","termid":"PBO:0060063"}


id: GO:1901054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sarcosine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:31402327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sarcosine biosynthetic process","synonyms":[{"name":"sarcosine anabolism","type":"exact"},{"name":"sarcosine biosynthesis","type":"exact"},{"name":"sarcosine formation","type":"exact"},{"name":"sarcosine synthesis","type":"exact"}],"termid":"GO:1901054"}


id: FYPO:0008048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation at centromere during meiosis","termid":"FYPO:0008048"}


id: PBO:0076482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAR (HIV-1) RNA binding protein 1","termid":"PBO:0076482"}


id: PBO:0068448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 22, pseudogene","termid":"PBO:0068448"}


id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: PBO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Arg82 (predicted)","termid":"PBO:0036283"}


id: GO:0046974
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106624,106625],"is_not":false,"summary":null,"term":"GO:0046974"},{"annotations":[106626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 9) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 9). This reaction is the addition of up to three methyl groups to the lysine residue at position 9 of the histone H3 protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"histone H3K9 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427336","Reactome:R-HSA-427527"],"synonyms":[{"name":"histone H3K9 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K9 specific)","type":"exact"},{"name":"histone methylase activity (H3-K9 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K9 specific)","type":"exact"},{"name":"histone-H3K9 methyltransferase activity","type":"exact"}],"termid":"GO:0046974","terms_by_termid":{"GO:0046974":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null}}


id: PBO:0084446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; deletion suppresses mutation of mpt5; DSF1 has a paralog, MAN2, that arose from a segmental duplication","termid":"PBO:0084446"}


id: PBO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS actin remodeling regulator","termid":"PBO:0061003"}


id: PBO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin family protein, involved in autophagy","termid":"PBO:0000962"}


id: GO:0010113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of systemic acquired resistance","synonyms":[{"name":"down regulation of systemic acquired resistance","type":"exact"},{"name":"down-regulation of systemic acquired resistance","type":"exact"},{"name":"downregulation of systemic acquired resistance","type":"exact"},{"name":"inhibition of systemic acquired resistance","type":"narrow"}],"termid":"GO:0010113"}


id: PBO:0066482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0066482"}


id: FYPO:0000560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle after pheromone arrest is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"normal recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: normal","type":"related"}],"termid":"FYPO:0000560"}


id: PBO:0064278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing J1","termid":"PBO:0064278"}


id: PBO:0073337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 13, pseudogene","termid":"PBO:0073337"}


id: PBO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 32","termid":"PBO:0071491"}


id: FYPO:0001385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then undergoes cell cycle arrest with replicated DNA, and eventually dies.","definition_xrefs":["PomBase:mah","PMID:9705504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest with replicated DNA","synonyms":[{"name":"inviable following spore germination, without cell division, cell cycle arrest with replicated DNA","type":"exact"},{"name":"inviable germinated spore, without cell division, cell cycle arrest with replicated DNA","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest with replicated DNA","type":"exact"}],"termid":"FYPO:0001385"}


id: SO:0000791
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000791 cloned_genomic (obsolete SO:0000791)","termid":"SO:0000791"}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: PBO:0047094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member F","termid":"PBO:0047094"}


id: GO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amide = a nitrile + H2O.","definition_xrefs":["RHEA:12673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrile hydratase activity","secondary_identifiers":["MetaCyc:NITRILE-HYDRATASE-RXN","UM-BBD_enzymeID:e0067","EC:4.2.1.84"],"synonyms":[{"name":"3-cyanopyridine hydratase activity","type":"narrow"},{"name":"H-NHase activity","type":"related"},{"name":"L-NHase activity","type":"related"},{"name":"NHase activity","type":"related"},{"name":"acrylonitrile hydratase activity","type":"related"},{"name":"aliphatic nitrile hydratase activity","type":"related"},{"name":"aliphatic-amide hydro-lyase (nitrile-forming)","type":"related"},{"name":"nitrile hydro-lyase activity","type":"related"}],"termid":"GO:0018822"}


id: PBO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.11","termid":"PBO:0000510"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: PBO:0078311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 7-1","termid":"PBO:0078311"}


id: PBO:0046094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 5","termid":"PBO:0046094"}


id: PBO:0030393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_(obsolete_FYPO:0001224)","termid":"PBO:0030393"}


id: GO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"negative regulation of spore germination","termid":"GO:1904360"},{"relation_name":"negatively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of encysted zoospore germination","synonyms":[{"name":"negative regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075229"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: PBO:0039594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anosmin 1","termid":"PBO:0039594"}


id: GO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.","definition_xrefs":["EC:3.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"arginine deiminase activity","secondary_identifiers":["RHEA:19597","MetaCyc:ARGININE-DEIMINASE-RXN"],"synonyms":[{"name":"L-arginine deiminase activity","type":"related"},{"name":"L-arginine iminohydrolase activity","type":"related"},{"name":"arginine dihydrolase activity","type":"related"},{"name":"citrulline iminase activity","type":"related"}],"termid":"GO:0016990"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: GO:1901451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to benzene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to benzene","termid":"GO:1901423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to benzene","termid":"GO:1901451"}


id: PBO:0013117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl6","termid":"PBO:0013117"}


id: PBO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucose_import","termid":"PBO:0030819"}


id: GO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-citramalyl-CoA = pyruvate + acetyl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-citramalyl-CoA lyase activity","secondary_identifiers":["RHEA:38275","MetaCyc:RXN-13231","EC:4.1.3.46"],"synonyms":[{"name":"Ccl","type":"related"},{"name":"R-citramalyl-CoA lyase activity","type":"exact"}],"termid":"GO:0044101"}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: PBO:0055338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2766","termid":"PBO:0055338"}


id: PBO:0040478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1 like","termid":"PBO:0040478"}


id: GO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric prebend segment over time, from its formation to the mature structure. The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prebend segment development","termid":"GO:0072066"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric prebend segment development","termid":"GO:0072228"}


id: GO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte activation","termid":"GO:0051249"}


id: GO:0000749
data:
  {"annotated_genes":["SJAG_02233","SJAG_03340","SJAG_00990","SJAG_03209","SJAG_02923","SJAG_01718","SJAG_00993","SJAG_01345","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101646],"is_not":false,"summary":null,"term":"GO:0000749"},{"annotations":[89458,88330,92516,93187,85410,102397],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84338,103265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus that positively regulates the process of conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"response to pheromone triggering conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007328","GO:0030434"],"synonyms":[{"name":"response to pheromone during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000749","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: GO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of oospore formation","termid":"GO:0075244"}


id: GO:1900746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"regulation of VEGF signaling","type":"exact"},{"name":"regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900746"}


id: GO:2000121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"regulation of removal of superoxide radicals","synonyms":[{"name":"regulation of removal of O2-","type":"exact"},{"name":"regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:2000121"}


id: PBO:0027916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0027916"}


id: PBO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 3","termid":"PBO:0039556"}


id: PBO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 2","termid":"PBO:0044494"}


id: PBO:0067929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 231","termid":"PBO:0067929"}


id: PBO:0040669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAN antisense RNA 1","termid":"PBO:0040669"}


id: PBO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family telomere binding protein (predicted)","termid":"PBO:0001486"}


id: PBO:0047220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member B","termid":"PBO:0047220"}


id: PBO:0027227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heme_binding","termid":"PBO:0027227"}


id: GO:0006428
data:
  {"annotated_genes":["SJAG_04285","SJAG_03545"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108765,112160],"is_not":false,"summary":null,"term":"GO:0006428"}]},"cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. The isoleucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a isoleucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03545":null,"SJAG_04285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"isoleucyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006428","terms_by_termid":{"GO:0006428":null}}


id: PBO:0028581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclease_activity","termid":"PBO:0028581"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: PBO:0088963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg13","termid":"PBO:0088963"}


id: PBO:0074673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58B","termid":"PBO:0074673"}


id: PBO:0077602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11D","termid":"PBO:0077602"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04123","SJAG_00352","SJAG_01054","SJAG_03275","SJAG_04681","SJAG_00106","SJAG_02400","SJAG_00376","SJAG_03771","SJAG_01673","SJAG_04189","SJAG_04711","SJAG_01997","SJAG_04380","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[85376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[104510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[113264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[86475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[97270,83670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[111144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[115047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[104481,108546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[103996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[97237,100366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00352":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.-"],"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0052717":null}}


id: GO:1903158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any L-glutamate transmembrane transporter activity that is involved in L-glutamate import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamate transmembrane transporter activity involved in L-glutamate import into cell (obsolete GO:1903158)","synonyms":[{"name":"L-glutamate transmembrane transporter activity involved in L-glutamate import into cell","type":"exact"},{"name":"glutamate/aspartate porter activity involved in L-glutamate import into cell","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity involved in L-glutamate import into cell","type":"narrow"}],"termid":"GO:1903158"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: GO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex II","termid":"GO:0045273"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex II","synonyms":[{"name":"respiratory chain complex II","type":"broad"}],"termid":"GO:0045274"}


id: GO:1904367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokinesis.","definition_xrefs":["PMID:8679543","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of chemokinesis","termid":"GO:1904365"},{"relation_name":"positively_regulates","term_name":"chemokinesis","termid":"GO:0042466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokinesis","synonyms":[{"name":"activation of chemokinesis","type":"narrow"},{"name":"up regulation of chemokinesis","type":"exact"},{"name":"up-regulation of chemokinesis","type":"exact"},{"name":"upregulation of chemokinesis","type":"exact"}],"termid":"GO:1904367"}


id: PBO:0082067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-adenine DNA glycosylase; initiates base excision repair (BER) by removing damaged bases to create abasic sites that are subsequently repaired; expansion of BER repair removes alkylated bases resulting from alkylating agent-induced DNA damage, compensating for the lack of DNA repair by oxidative dealkylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082067"}


id: PBO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase","termid":"PBO:0001995"}


id: PBO:0045702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 1B","termid":"PBO:0045702"}


id: GO:0031171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["GOC:mah","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"},{"relation_name":"is_a","term_name":"ferricrocin metabolic process","termid":"GO:0031170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ferricrocin biosynthetic process","secondary_identifiers":["GO:0031186","GO:0031185"],"synonyms":[{"name":"ferricrocin anabolism","type":"exact"},{"name":"ferricrocin biosynthesis","type":"exact"},{"name":"ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"ferricrocin formation","type":"exact"},{"name":"ferricrocin synthesis","type":"exact"}],"termid":"GO:0031171"}


id: PBO:0108546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding protein Rna15","termid":"PBO:0108546"}


id: FYPO:0002507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein palmitoylation during vegetative growth","synonyms":[{"name":"abolished protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"protein palmitoylation abolished during vegetative growth","type":"exact"},{"name":"protein palmitoylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002507"}


id: PBO:0083246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; gene expression induced by heat","termid":"PBO:0083246"}


id: GO:0015936
data:
  {"annotated_genes":["SJAG_02247","SJAG_04627","SJAG_01139","SJAG_04288","SJAG_00427","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110953,113152,85551,106736,88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_01139":null,"SJAG_02247":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"coenzyme A metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006763"],"synonyms":[{"name":"CoA metabolism","type":"exact"},{"name":"coenzyme A metabolism","type":"exact"}],"termid":"GO:0015936","terms_by_termid":{"GO:0015937":null,"GO:0015938":null}}


id: PBO:0076622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor D","termid":"PBO:0076622"}


id: FYPO:0002303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0000004","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"inviable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division","type":"related"},{"name":"inviable with septation independent of mitosis","type":"related"},{"name":"inviable with septation without nuclear division","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002303"}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PBO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2","termid":"PBO:0036472"}


id: SO:0000898
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is epigenetically modified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_gene","synonyms":[{"name":"epigenetically modified gene","type":"exact"}],"termid":"SO:0000898"}


id: PBO:0082430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame otherwise encoding L-serine dehydratase","termid":"PBO:0082430"}


id: GO:0051285
data:
  {"annotated_genes":["SJAG_00397","SJAG_01114","SJAG_03748","SJAG_04724","SJAG_00661","SJAG_04901","SJAG_04781","SJAG_02379","SJAG_03637","SJAG_04703","SJAG_02166","SJAG_02045","SJAG_00030","SJAG_04509","SJAG_00268","SJAG_01738","SJAG_03453","SJAG_01456","SJAG_03581","SJAG_01453","SJAG_04690","SJAG_03625","SJAG_01787","SJAG_01964","SJAG_00140","SJAG_02241","SJAG_04765","SJAG_02695","SJAG_01268","SJAG_01360","SJAG_05285","SJAG_04001","SJAG_02368","SJAG_00851","SJAG_02320","SJAG_02222","SJAG_02838","SJAG_03705","SJAG_04771","SJAG_02087","SJAG_00104","SJAG_00805","SJAG_00800","SJAG_03126","SJAG_00845","SJAG_01167","SJAG_01196","SJAG_04666","SJAG_04982","SJAG_03655","SJAG_03011","SJAG_04776","SJAG_02392","SJAG_01855","SJAG_01448","SJAG_04620","SJAG_02169","SJAG_03379","SJAG_01118","SJAG_02989","SJAG_03486","SJAG_00514","SJAG_04322","SJAG_01925","SJAG_00216","SJAG_00700"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83707,83724,84074,84249,84344,84654,85505,86022,86902,86925,86995,87217,87519,88044,89697,89999,90703,91337,91499,91550,91978,92399,92435,92998,93108,93857,94960,95101,95854,96009,96288,97049,98761,98780,99093,99374,99615,99823,99871,100765,102214,102974,103137,103162,104462,106234,106885,106990,107482,107778,107992,108425,109173,109204,110154,110269,112284,112589,113976,114698],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[90704,93339,109174,86875,86903,88554,108071,102215,112590,114699,113977,112285,114891,110270,111917,84075,86023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[97050,108072,113978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane at the cell tip. The cell tip is the region at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00104":null,"SJAG_00140":null,"SJAG_00216":null,"SJAG_00268":null,"SJAG_00397":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00700":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01167":null,"SJAG_01196":null,"SJAG_01268":null,"SJAG_01360":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01738":null,"SJAG_01787":null,"SJAG_01855":null,"SJAG_01925":null,"SJAG_01964":null,"SJAG_02045":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02695":null,"SJAG_02838":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_04001":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04620":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cortex of cell end","type":"exact"}],"termid":"GO:0051285","terms_by_termid":{"GO:0051285":null,"GO:0140472":null,"GO:1902716":null}}


id: PBO:0109456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human ZNRF3 homolog","termid":"PBO:0109456"}


id: PBO:0049553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 15","termid":"PBO:0049553"}


id: GO:1900615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"emericellamide A metabolic process","synonyms":[{"name":"emericellamide A metabolism","type":"exact"}],"termid":"GO:1900615"}


id: GO:1901275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tartrate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate metabolic process","synonyms":[{"name":"tartrate metabolism","type":"exact"}],"termid":"GO:1901275"}


id: MOD:01978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using either free L-asparagine and releasing ammonia or using a peptidyl L-aspartic acid residue and releasing water.","definition_xrefs":["RESID:AA0525","PubMed:8706862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01978"}


id: GO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.","definition_xrefs":["EC:2.1.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140097","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (cytosine-N4-specific) activity","secondary_identifiers":["RHEA:16857","MetaCyc:2.1.1.113-RXN"],"synonyms":[{"name":"DNA[cytosine-N4]methyltransferase activity","type":"related"},{"name":"N(4)-cytosine-specific DNA methylase activity","type":"related"},{"name":"N4-cytosine-specific DNA methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine 4-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine N4-methyltransferase activity","type":"related"},{"name":"m4C-forming MTase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0015667"}


id: FYPO:0000624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of negative regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during vegetative growth","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during vegetative growth","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal negative regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"}],"termid":"FYPO:0000624"}


id: _global:term_tracker_item
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"term_tracker_item","secondary_identifiers":["IAO:0000233"],"termid":"_global:term_tracker_item"}


id: PBO:0083462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KTR3","termid":"PBO:0083462"}


id: PBO:0035710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_perinuclear_region_of_cytoplasm_during_mitotic_interphase","termid":"PBO:0035710"}


id: PBO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 2","termid":"PBO:0061702"}


id: PBO:0029831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell","termid":"PBO:0029831"}


id: PBO:0005182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survivin, Bir1","termid":"PBO:0005182"}


id: GO:0032998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Fc-epsilon receptor I complex","synonyms":[{"name":"FceRI complex","type":"exact"},{"name":"IgE receptor complex","type":"broad"},{"name":"immunoglobulin E receptor complex","type":"broad"}],"termid":"GO:0032998"}


id: PBO:0077731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 3","termid":"PBO:0077731"}


id: PBO:0053692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 887","termid":"PBO:0053692"}


id: PBO:0028542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actomyosin_contractile_ring_contraction_uncoupled_from_septum_assembly","termid":"PBO:0028542"}


id: PBO:0087614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA genes at the nucleolus; may influence multiple aspects of chromosome transmission","termid":"PBO:0087614"}


id: GO:0042761
data:
  {"annotated_genes":["SJAG_01458","SJAG_01356","SJAG_02717","SJAG_01300","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85675,88091,99603,102004,107448],"is_not":false,"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5080"],"synonyms":[{"name":"very-long-chain fatty acid anabolism","type":"exact"},{"name":"very-long-chain fatty acid biosynthesis","type":"exact"},{"name":"very-long-chain fatty acid biosynthetic process","type":"exact"},{"name":"very-long-chain fatty acid formation","type":"exact"},{"name":"very-long-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0042761","terms_by_termid":{"GO:0042761":null}}


id: PBO:0028499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosome_binding","termid":"PBO:0028499"}


id: SO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome that has been introduced by backcrossing with a separate species.","definition_xrefs":["PMID:11454782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introgressed_chromosome_region","synonyms":[{"name":"introgressed chromosome region","type":"exact"}],"termid":"SO:0000664"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN","EC:4.3.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0009975","GO:0016829"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: PR:O43061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug136 gene.","definition_xrefs":["UniProtKB:O43061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 136 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.08","synonyms":[{"name":"Spom972h-mug136","type":"exact"}],"termid":"PR:O43061"}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: PBO:0045799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 3","termid":"PBO:0045799"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: GO:0009015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-succinyl-L-arginine + 2 H2O + 2 H+ = N(2)-succinyl-L-ornithine + CO2 + 2 NH4.","definition_xrefs":["RHEA:19533","EC:3.5.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-succinylarginine dihydrolase activity","secondary_identifiers":["KEGG_REACTION:R04189","MetaCyc:SUCCARGDIHYDRO-RXN"],"synonyms":[{"name":"2-N-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"related"},{"name":"AruB","type":"related"},{"name":"AstB","type":"related"},{"name":"N2-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"exact"},{"name":"N2-succinylarginine dihydrolase activity","type":"exact"},{"name":"SADH","type":"related"},{"name":"arginine succinylhydrolase activity","type":"exact"},{"name":"succinylarginine dihydrolase activity","type":"exact"}],"termid":"GO:0009015"}


id: SO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding valyl tRNA (SO:000273).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine_tRNA_primary_transcript","synonyms":[{"name":"valine tRNA primary transcript","type":"exact"}],"termid":"SO:0000230"}


id: GO:0120288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["GOC:krc","PMID:32616437"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120288)","termid":"GO:0120288"}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: GO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thiosulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thiosulfate transport","synonyms":[{"name":"thiosulphate transport","type":"exact"}],"termid":"GO:0015709"}


id: PBO:0075349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin domain containing 1","termid":"PBO:0075349"}


id: PBO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 4","termid":"PBO:0061313"}


id: PBO:0065482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 1","termid":"PBO:0065482"}


id: PBO:0018202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transmembrane transporter (predicted)","termid":"PBO:0018202"}


id: PBO:0087411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (17 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3","termid":"PBO:0087411"}


id: GO:0008205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects. It is the inactive prohormone of the moulting hormone ecdysterone and may have intrinsic hormonal activity at other stages of insect development.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ecdysone metabolic process","synonyms":[{"name":"ecdysone metabolism","type":"exact"}],"termid":"GO:0008205"}


id: FYPO:0002185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and tapered cells (obsolete FYPO:0002185)","synonyms":[{"name":"inviable mixed population including germinated spores and bottle/skittle cells","type":"related"},{"name":"inviable mixed population including germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002185"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: PBO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn12","termid":"PBO:0004859"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: GO:0052233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052233)","synonyms":[{"name":"positive aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052233"}


id: PBO:0048276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 12","termid":"PBO:0048276"}


id: FYPO:0007394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of one or more RNA molecules differs from normal.","definition_xrefs":["PMID:24793650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA structure","synonyms":[{"name":"abnormal RNA secondary structure","type":"narrow"}],"termid":"FYPO:0007394"}


id: GO:0019119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9,10-dihydrodiolphenanthrene.","definition_xrefs":["GOC:mah","UM-BBD_reactionID:r0496","UM-BBD_reactionID:r0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}


id: PATO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased contractility","synonyms":[{"name":"high contractility","type":"exact"}],"termid":"PATO:0001580"}


id: PBO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 12","termid":"PBO:0060111"}


id: GO:0006211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-methylcytosine metabolic process","termid":"GO:0019857"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-methylcytosine catabolic process","synonyms":[{"name":"5-methylcytosine breakdown","type":"exact"},{"name":"5-methylcytosine catabolism","type":"exact"},{"name":"5-methylcytosine degradation","type":"exact"}],"termid":"GO:0006211"}


id: GO:0051235
data:
  {"annotated_genes":["SJAG_00661","SJAG_01993","SJAG_04982","SJAG_01116","SJAG_04221","SJAG_01001","SJAG_04867","SJAG_04049","SJAG_04041","SJAG_00368","SJAG_03162","SJAG_02980","SJAG_03609","SJAG_01537","SJAG_02763","SJAG_01906","SJAG_01738","SJAG_00321","SJAG_03170","SJAG_03850","SJAG_01180","SJAG_00053","SJAG_04059","SJAG_00030","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"},{"annotations":[108188,84951,90786,110307,114943,92850,107118],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"},{"annotations":[87605,115179,110308,105866,108189,86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019915"},{"annotations":[86578,100500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[100776,96296,106995,90167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[89522],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[104799],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[93864,110442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[103156,111318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00321":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01180":null,"SJAG_01537":null,"SJAG_01738":null,"SJAG_01906":null,"SJAG_01993":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03609":null,"SJAG_03850":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04221":null,"SJAG_04867":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of location","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"maintenance of localization","type":"exact"},{"name":"retention","type":"narrow"},{"name":"sequestering","type":"narrow"},{"name":"storage","type":"narrow"}],"termid":"GO:0051235","terms_by_termid":{"GO:0006621":null,"GO:0006880":null,"GO:0019915":null,"GO:0032065":null,"GO:0042989":null,"GO:0051209":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:0140042":null,"GO:1990854":null}}


id: PBO:0039957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein","termid":"PBO:0039957"}


id: PBO:0076123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 5L","termid":"PBO:0076123"}


id: PBO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036059"}


id: FYPO:0002887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to telomere during vegetative growth","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002887"}


id: GO:1904966
data:
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id: PBO:0077355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 95","termid":"PBO:0077355"}


id: PBO:0057338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 524","termid":"PBO:0057338"}


id: PBO:0087029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L14A; N-terminally acetylated; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14A has a paralog, RPL14B, that arose from the whole genome duplication","termid":"PBO:0087029"}


id: PBO:0077371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 109","termid":"PBO:0077371"}


id: FYPO:0003819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased 5'-3' DNA helicase activity","synonyms":[{"name":"reduced 5'-3' DNA helicase activity","type":"exact"}],"termid":"FYPO:0003819"}


id: GO:0101007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under salt stress. The stress is usually an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mec"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to salt stress (obsolete GO:0101007)","termid":"GO:0101007"}


id: GO:0103085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-7-methylthioheptanoate + acetyl-CoA + H2O = H+ + 2-(5'-methylthio)pentylmalate + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"2-(5'-methylthio)pentylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4169"],"termid":"GO:0103085"}


id: PBO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 6 (predicted)","termid":"PBO:0005892"}


id: GO:0010629
data:
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regulation of gene expression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:35226668":null},"synonyms":[{"name":"gene silencing","type":"related"}],"termid":"GO:0010629","terms_by_termid":{"GO:0000183":null,"GO:0000184":null,"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0000294":null,"GO:0000956":null,"GO:0006402":null,"GO:0010629":null,"GO:0010964":null,"GO:0016441":null,"GO:0030422":null,"GO:0030466":null,"GO:0031047":null,"GO:0031048":null,"GO:0031087":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033562":null,"GO:0033621":null,"GO:0033696":null,"GO:0036450":null,"GO:0043488":null,"GO:0043628":null,"GO:0045814":null,"GO:0048255":null,"GO:0060211":null,"GO:0060213":null,"GO:0060906":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0061188":null,"GO:0070478":null,"GO:0070481":null,"GO:0070935":null,"GO:0070966":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071042":null,"GO:0071044":null,"GO:0090052":null,"GO:0090055":null,"GO:0120271":null,"GO:0120272":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:1902373":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null,"GO:1904689":null,"GO:1990074":null,"GO:1990431":null,"GO:1990432":null,"GO:1990625":null,"GO:2000766":null,"GO:2000815":null}}


id: GO:0060447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a region of the lung epithelium initiates an outgrowth.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud outgrowth involved in lung branching","synonyms":[{"name":"bud formation involved in lung branching","type":"exact"}],"termid":"GO:0060447"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: PBO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L9 (predicted)","termid":"PBO:0001688"}


id: PBO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.21","termid":"PBO:0001810"}


id: SO:1001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_peptides_different_start","synonyms":[{"name":"encodes overlapping peptides different start","type":"exact"}],"termid":"SO:1001191"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: PBO:0082361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein; required for recruiting other ATG proteins to the pre-autophagosomal structure (PAS); interacts with Atg17p and localizas to the PAS in a manner interdependent with Atg17p and Cis1p; not conserved; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0082361"}


id: PBO:0067086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 122, pseudogene","termid":"PBO:0067086"}


id: GO:0006419
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"}]},"cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"alanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006419","terms_by_termid":{"GO:0070143":null,"GO:1990762":null}}


id: GO:0090700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a plant organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:9090883","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of plant organ identity","termid":"GO:0090700"}


id: PBO:0040161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agouti signaling protein","termid":"PBO:0040161"}


id: PR:Q10334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-pyruvate aminotransferase AlaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.08","secondary_identifiers":["UniProtKB:Q10334"],"synonyms":[{"name":"GPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alaA","type":"exact"},{"name":"glutamate pyruvate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--alanine transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--pyruvic transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10334"}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: GO:1900288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900288"}


id: PBO:0053755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 996","termid":"PBO:0053755"}


id: PBO:0073596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sedoheptulokinase","termid":"PBO:0073596"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: PBO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1 (predicted)","termid":"PBO:0036372"}


id: PBO:0069750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1032, pseudogene","termid":"PBO:0069750"}


id: PBO:0057373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ao","termid":"PBO:0057373"}


id: PBO:0081524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 433","termid":"PBO:0081524"}


id: PBO:0013017
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCm Binding protein","termid":"PBO:0013017"}


id: PBO:0081975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 2","termid":"PBO:0081975"}


id: GO:1900875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heptadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"heptadec-1-ene metabolic process","termid":"GO:1900874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadec-1-ene biosynthetic process","synonyms":[{"name":"heptadec-1-ene anabolism","type":"exact"},{"name":"heptadec-1-ene biosynthesis","type":"exact"},{"name":"heptadec-1-ene formation","type":"exact"},{"name":"heptadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900875"}


id: GO:0018512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH + H+.","definition_xrefs":["EC:1.3.1.59"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity (obsolete GO:0018512)","secondary_identifiers":["UM-BBD_reactionID:r0216"],"synonyms":[{"name":"1,2-dihydroxy-3-methylcyclohexa-3,5-diene-carboxylate dehydrogenase activity","type":"exact"},{"name":"1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity","type":"exact"}],"termid":"GO:0018512"}


id: PBO:0074713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74D","termid":"PBO:0074713"}


id: PBO:0013752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1","termid":"PBO:0013752"}


id: PBO:0083334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the characterized ORF BDF1/YLR399C","termid":"PBO:0083334"}


id: PBO:0064400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARN like ribonuclease domain containing exonuclease 1","termid":"PBO:0064400"}


id: PBO:0086791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; SWAT-GFP fusion protein localizes to the cell periphery, while mCherry fusion localizes to both the cell periphery and vacuole; YHL026C is not an essential gene; in 2005 the start site was moved 141 nt upstream (see Locus History)","termid":"PBO:0086791"}


id: GO:1904687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle disassembly","termid":"GO:1904686"},{"relation_name":"positively_regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"positive regulation of mitotic spindle disassembly","synonyms":[{"name":"activation of mitotic spindle breakdown","type":"narrow"},{"name":"activation of mitotic spindle catabolism","type":"narrow"},{"name":"activation of mitotic spindle degradation","type":"narrow"},{"name":"activation of mitotic spindle disassembly","type":"narrow"},{"name":"activation of spindle breakdown during mitosis","type":"narrow"},{"name":"activation of spindle degradation during mitosis","type":"narrow"},{"name":"activation of spindle disassembly during mitosis","type":"narrow"},{"name":"positive regulation of mitotic spindle breakdown","type":"exact"},{"name":"positive regulation of mitotic spindle catabolism","type":"exact"},{"name":"positive regulation of mitotic spindle degradation","type":"exact"},{"name":"positive regulation of spindle breakdown during mitosis","type":"exact"},{"name":"positive regulation of spindle degradation during mitosis","type":"exact"},{"name":"positive regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle breakdown","type":"exact"},{"name":"up regulation of mitotic spindle catabolism","type":"exact"},{"name":"up regulation of mitotic spindle degradation","type":"exact"},{"name":"up regulation of mitotic spindle disassembly","type":"exact"},{"name":"up regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up regulation of spindle degradation during mitosis","type":"exact"},{"name":"up regulation of spindle disassembly during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle breakdown","type":"exact"},{"name":"up-regulation of mitotic spindle catabolism","type":"exact"},{"name":"up-regulation of mitotic spindle degradation","type":"exact"},{"name":"up-regulation of mitotic spindle disassembly","type":"exact"},{"name":"up-regulation of spindle breakdown during mitosis","type":"exact"},{"name":"up-regulation of spindle degradation during mitosis","type":"exact"},{"name":"up-regulation of spindle disassembly during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle breakdown","type":"exact"},{"name":"upregulation of mitotic spindle catabolism","type":"exact"},{"name":"upregulation of mitotic spindle degradation","type":"exact"},{"name":"upregulation of mitotic spindle disassembly","type":"exact"},{"name":"upregulation of spindle breakdown during mitosis","type":"exact"},{"name":"upregulation of spindle degradation during mitosis","type":"exact"},{"name":"upregulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904687"}


id: GO:0030257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of approximately 20 proteins, most of which are located in the cytoplasmic membrane that carries out protein secretion in the bacterial type III secretion system; type III secretion also requires a cytoplasmic, probably membrane-associated ATPase.","definition_xrefs":["PMID:9618447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type III protein secretion system complex","synonyms":[{"name":"T3SS complex","type":"exact"},{"name":"TTSS complex","type":"exact"}],"termid":"GO:0030257"}


id: PBO:0069556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 828, pseudogene","termid":"PBO:0069556"}


id: GO:0030549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"},{"relation_name":"is_a","term_name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activator activity","termid":"GO:0030549"}


id: PBO:0062487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 3","termid":"PBO:0062487"}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: CHEBI:43732
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole","termid":"CHEBI:43732"}


id: PR:O94272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-aminobutyric acid receptor-associated protein-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.24c","secondary_identifiers":["UniProtKB:O94272"],"synonyms":[{"name":"Spom972h-GABARAPL2","type":"exact"},{"name":"autophagy-related ubiquitin-like modifier atg8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94272"}


id: PBO:0029800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thick_actin_cables","termid":"PBO:0029800"}


id: PBO:0047082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member A","termid":"PBO:0047082"}


id: PBO:0042119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 191","termid":"PBO:0042119"}


id: PBO:0086870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative spore wall protein; expression increases during sporulation; not an essential gene; YOR214C has a paralog, SPO19, that arose from the whole genome duplication","termid":"PBO:0086870"}


id: PBO:0085368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoserine phosphatase of the phosphoglycerate pathway; involved in serine and glycine biosynthesis, expression is regulated by the available nitrogen source","termid":"PBO:0085368"}


id: PBO:0070224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 157 pseudogene","termid":"PBO:0070224"}


id: PBO:0109643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 (pseudogene)","termid":"PBO:0109643"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PBO:0062622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 1 pseudogene","termid":"PBO:0062622"}


id: PBO:0082068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methylbutanal reductase and NADPH-dependent methylglyoxal reductase; stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway; restores resistance to glycolaldehyde by coupling reduction of glycolaldehyde to ethylene glycol and oxidation of NADPH to NADP+; protein abundance increases in response to DNA replication stress; methylglyoxal reductase (NADPH-dependent) is also known as D-lactaldehyde dehydrogenase","termid":"PBO:0082068"}


id: GO:0015421
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103316],"is_not":false,"summary":null,"term":"GO:0015421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + oligopeptide(out) = ADP + phosphate + oligopeptide(in).","definition_xrefs":["RHEA:14429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type oligopeptide transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5223317","EC:7.4.2.6","MetaCyc:3.6.3.23-RXN"],"synonyms":[{"name":"ABC-type oligopeptide transporter","type":"exact"},{"name":"ATP-dependent oligopeptide transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled oligopeptide transmembrane transporter activity","type":"related"},{"name":"oligopeptide ABC transporter","type":"narrow"},{"name":"oligopeptide permease activity","type":"related"},{"name":"oligopeptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015421","terms_by_termid":{"GO:0015421":null}}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: PBO:0054724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2133","termid":"PBO:0054724"}


id: GO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"},{"relation_name":"negatively_regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of sister chromatid cohesion","termid":"GO:0034092"}


id: PBO:0056993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34a","termid":"PBO:0056993"}


id: FYPO:0005514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuole is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to vacuole","synonyms":[{"name":"ectopic protein localization to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005514"}


id: GO:0016667
data:
  {"annotated_genes":["SJAG_00822","SJAG_05027","SJAG_04539","SJAG_04953","SJAG_00489","SJAG_00614","SJAG_01693","SJAG_02489","SJAG_04060","SJAG_00288","SJAG_01417","SJAG_01292","SJAG_02827","SJAG_04399","SJAG_01162","SJAG_04632","SJAG_03290","SJAG_04046","SJAG_01038","SJAG_01647","SJAG_03653","SJAG_00196","SJAG_02495","SJAG_03414","SJAG_02599","SJAG_00419","SJAG_04125","SJAG_03992","SJAG_02016","SJAG_01199","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[114475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015036"},{"annotations":[93279,99323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"},{"annotations":[94090,85579,110857,97738,103547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015038"},{"annotations":[101345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[91710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[91192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016668"},{"annotations":[102733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[91711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[84957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"},{"annotations":[102921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[96124,84808,87054,97739,98994,94629,85581,107273,113467,88458,106963,110897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015035"},{"annotations":[104566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"},{"annotations":[97933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[83972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050311"},{"annotations":[83973,113571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[110898,94630,106964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016972"},{"annotations":[78266,106227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00288":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00822":null,"SJAG_01038":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01292":null,"SJAG_01417":null,"SJAG_01647":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03290":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_04060":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04539":null,"SJAG_04632":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.-.-","Reactome:R-HSA-2213240"],"synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"narrow"},{"name":"oxidoreductase activity, acting on sulphur group of donors","type":"exact"}],"termid":"GO:0016667","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004604":null,"GO:0004783":null,"GO:0004791":null,"GO:0008113":null,"GO:0015035":null,"GO:0015036":null,"GO:0015038":null,"GO:0016668":null,"GO:0016971":null,"GO:0016972":null,"GO:0032542":null,"GO:0033743":null,"GO:0036456":null,"GO:0047134":null,"GO:0050311":null,"GO:0070224":null}}


id: PBO:0088755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap2","termid":"PBO:0088755"}


id: GO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate.","definition_xrefs":["EC:2.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arsenite methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5696213","MetaCyc:2.1.1.138-RXN","MetaCyc:2.1.1.137-RXN","UM-BBD_reactionID:r0805","Reactome:R-HSA-5696220"],"synonyms":[{"name":"S-adenosyl-L-methionine:arsenic(III) methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:arsenite As-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:methylarsonite As-methyltransferase activity","type":"related"}],"termid":"GO:0030791"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: GO:0031117
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97976],"is_not":false,"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization or depolymerization","termid":"GO:0031112"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule depolymerization","type":"narrow"},{"name":"microtubule destabilization","type":"exact"},{"name":"positive regulation of microtubule catastrophe","type":"narrow"},{"name":"positive regulation of microtubule disassembly","type":"exact"},{"name":"stimulation of microtubule depolymerization","type":"narrow"},{"name":"up regulation of microtubule depolymerization","type":"exact"},{"name":"up-regulation of microtubule depolymerization","type":"exact"},{"name":"upregulation of microtubule depolymerization","type":"exact"}],"termid":"GO:0031117","terms_by_termid":{"GO:0031117":null}}


id: GO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate = 5-oxo-D-proline + H2O.","definition_xrefs":["RHEA:22360","EC:4.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0009975","GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"D-glutamate cyclase activity","secondary_identifiers":["KEGG_REACTION:R01583","MetaCyc:D-GLUTAMATE-CYCLASE-RXN"],"synonyms":[{"name":"D-glutamate hydro-lyase (cyclizing)","type":"related"},{"name":"D-glutamate hydro-lyase (cyclizing; 5-oxo-D-proline-forming)","type":"related"}],"termid":"GO:0047820"}


id: PR:P0CT63
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3002 gene.","definition_xrefs":["UniProtKB:P0CT63","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.03c","synonyms":[{"name":"Spom972h-rps3002","type":"exact"}],"termid":"PR:P0CT63"}


id: GO:0140743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"regulation of lncRNA transcription","termid":"GO:0140743"}


id: PBO:0017956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing (predicted)","termid":"PBO:0017956"}


id: PBO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 9","termid":"PBO:0060299"}


id: GO:1990213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17722699","PMID:20565685","GOC:ml"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of salicylic acid levels in host (obsolete GO:1990213)","termid":"GO:1990213"}


id: PBO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haptoglobin","termid":"PBO:0050526"}


id: PBO:0079056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-2","termid":"PBO:0079056"}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: GO:2000999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"positively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellulose catabolic process","synonyms":[{"name":"positive regulation of cellulose breakdown","type":"exact"},{"name":"positive regulation of cellulose catabolism","type":"exact"},{"name":"positive regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000999"}


id: GO:1904096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:bhm","PMID:22389722","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein tyrosine phosphatase complex","termid":"GO:1904096"}


id: PBO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter Mmt1 (predicted)","termid":"PBO:0018137"}


id: PBO:0066899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 199","termid":"PBO:0066899"}


id: PBO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12J","termid":"PBO:0048249"}


id: FYPO:0006511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells form telomeres that are shorter than normal during G0 phase. Normally, telomere length is stable in G0, whereas telomere sequences can be lost in mutants.","definition_xrefs":["PMID:29167439","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere length","termid":"FYPO:0006509"},{"relation_name":"is_a","term_name":"abnormal telomere morphology during G0","termid":"FYPO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"shortened telomeres during G0","synonyms":[{"name":"decreased telomere length during G0","type":"related"},{"name":"loss of telomeric sequence during G0","type":"exact"},{"name":"loss of telomeric sequence during quiescence","type":"exact"},{"name":"reduced telomere length during G0","type":"exact"},{"name":"short telomeres during G0","type":"exact"},{"name":"shortened telomeres during cell quiescence","type":"exact"},{"name":"shortened telomeres during quiescence","type":"exact"}],"termid":"FYPO:0006511"}


id: PBO:0027027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_homeostasis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027027"}


id: PBO:0080945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1","termid":"PBO:0080945"}


id: GO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimer which acts as a quinolinate synthetase; quinolinate synthetase B (L-aspartate oxidase) catalyzes the oxidation of L-aspartate to L-iminoaspartate; quinolinate synthetase A condenses L-imidoaspartate and dihydroxyacetone to quinolinate.","definition_xrefs":["UniProtKB:P10902"],"gene_count":0,"genotype_count":0,"name":"obsolete quinolinate synthetase complex (obsolete GO:0019804)","synonyms":[{"name":"quinolinate synthetase complex","type":"exact"}],"termid":"GO:0019804"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: GO:0006933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of adhesions at the front and rear of a migrating cell. At the leading edge, adhesion disassembly accompanies the formation of new protrusions; at the cell rear, it promotes tail retraction.","definition_xrefs":["GOC:tb","PMID:11944043","PMID:14657486","ISBN:0815316194","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in substrate-bound cell migration","synonyms":[{"name":"substrate-bound cell migration, cell release from substrate","type":"exact"}],"termid":"GO:0006933"}


id: GO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by T cell recognition of processed soluble or cell-associated antigens leading to cytokine release and leukocyte activation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV hypersensitivity","secondary_identifiers":["Wikipedia:Type_IV_hypersensitivity","GO:0016069"],"synonyms":[{"name":"delayed hypersensitivity response","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"}],"termid":"GO:0001806"}


id: PBO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1","termid":"PBO:0050421"}


id: PBO:0083019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YKL003W-A was added based on homology to closely related fungi, but was later withdrawn because it was completely contained within DID4/YKL002W","termid":"PBO:0083019"}


id: PBO:0064677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 13","termid":"PBO:0064677"}


id: PBO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2 (predicted)","termid":"PBO:0001294"}


id: FYPO:0005546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during S phase of the mitotic cell cycle. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein-protein interaction during mitotic S phase","synonyms":[{"name":"decreased protein binding during mitotic S phase","type":"exact"},{"name":"reduced protein-protein interaction during mitotic S phase","type":"exact"}],"termid":"FYPO:0005546"}


id: PBO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 29","termid":"PBO:0060041"}


id: FYPO:0003066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain one, two, or three spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with fewer than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with fewer than four spores","type":"exact"}],"termid":"FYPO:0003066"}


id: GO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Pro-Xaa > Ala-Xaa in oligopeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl oligopeptidase activity (obsolete GO:0004287)","synonyms":[{"name":"endoprolylpeptidase activity","type":"related"},{"name":"post-proline cleaving enzyme activity","type":"related"},{"name":"post-proline endopeptidase activity","type":"related"},{"name":"proline endopeptidase activity","type":"related"},{"name":"proline-specific endopeptidase activity","type":"related"},{"name":"prolyl endopeptidase activity","type":"related"},{"name":"prolyl oligopeptidase activity","type":"exact"}],"termid":"GO:0004287"}


id: GO:0072218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric ascending thin limb over time, from its formation to the mature structure. The metanephric ascending thin limb is a segment of a nephron tubule in the metanephros lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascending thin limb development","termid":"GO:0072021"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric loop of Henle development","termid":"GO:0072236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric ascending thin limb development","termid":"GO:0072218"}


id: PBO:0084434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; part of complex locus MAL3; nonfunctional in genomic reference strain S288C","termid":"PBO:0084434"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: PBO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CRE 5'-TGACGT-3'","termid":"PBO:0003677"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: GO:1905724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:18949025","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"positively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of trypanothione biosynthetic process","synonyms":[{"name":"activation of trypanothione anabolism","type":"narrow"},{"name":"activation of trypanothione biosynthesis","type":"narrow"},{"name":"activation of trypanothione biosynthetic process","type":"narrow"},{"name":"activation of trypanothione formation","type":"narrow"},{"name":"activation of trypanothione synthesis","type":"narrow"},{"name":"positive regulation of trypanothione anabolism","type":"exact"},{"name":"positive regulation of trypanothione biosynthesis","type":"exact"},{"name":"positive regulation of trypanothione formation","type":"exact"},{"name":"positive regulation of trypanothione synthesis","type":"exact"},{"name":"up regulation of trypanothione anabolism","type":"exact"},{"name":"up regulation of trypanothione biosynthesis","type":"exact"},{"name":"up regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up regulation of trypanothione formation","type":"exact"},{"name":"up regulation of trypanothione synthesis","type":"exact"},{"name":"up-regulation of trypanothione anabolism","type":"exact"},{"name":"up-regulation of trypanothione biosynthesis","type":"exact"},{"name":"up-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up-regulation of trypanothione formation","type":"exact"},{"name":"up-regulation of trypanothione synthesis","type":"exact"},{"name":"upregulation of trypanothione anabolism","type":"exact"},{"name":"upregulation of trypanothione biosynthesis","type":"exact"},{"name":"upregulation of trypanothione biosynthetic process","type":"exact"},{"name":"upregulation of trypanothione formation","type":"exact"},{"name":"upregulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905724"}


id: FYPO:0002700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal protein kinase activity","termid":"FYPO:0001381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased protein kinase activity","termid":"FYPO:0002700"}


id: PBO:0042618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin licensing and DNA replication factor 1","termid":"PBO:0042618"}


id: PBO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX dehydratase","termid":"PBO:0060548"}


id: GO:0052331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another, where two organisms are in a symbiotic interaction.","definition_xrefs":["UniProtKB-KW:KW-0354","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete hemolysis in other organism involved in symbiotic interaction (obsolete GO:0052331)","synonyms":[{"name":"haemolysis in other organism involved in symbiotic interaction","type":"exact"},{"name":"hemolysin activity","type":"related"},{"name":"hemolysis by organism of RBCs in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis by organism of erythrocytes in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis by organism of red blood cells in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"hemolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052331"}


id: PBO:0063371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1","termid":"PBO:0063371"}


id: PBO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 27","termid":"PBO:0072498"}


id: PBO:0090118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4","termid":"PBO:0090118"}


id: FYECO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which stearic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ stearic acid","termid":"FYECO:0000047"}


id: FYPO:0006495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal at tRNA genes.","definition_xrefs":["PMID:29622660","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of R-loops at tRNA genes","synonyms":[{"name":"increased RNA-DNA hybrid level at tRNA genes","type":"exact"},{"name":"increased level of DNA:RNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0006495"}


