# terms

id: FYECO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ubiquinone Q6 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ubiquinone Q6","synonyms":[{"name":"coenzyme Q6 added","type":"exact"}],"termid":"FYECO:0000131"}


id: GO:1905157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photosynthesis.","definition_xrefs":["PMID:7592491","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"positively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photosynthesis","synonyms":[{"name":"activation of photosynthesis","type":"narrow"},{"name":"up regulation of photosynthesis","type":"exact"},{"name":"up-regulation of photosynthesis","type":"exact"},{"name":"upregulation of photosynthesis","type":"exact"}],"termid":"GO:1905157"}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:25902521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of signal transduction in another organism","termid":"GO:0044509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of signal transduction in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: GO:0051403
data:
  {"annotated_genes":["SJAG_03263","SJAG_04522","SJAG_04503","SJAG_04825","SJAG_05000","SJAG_02392","SJAG_04551","SJAG_03753","SJAG_01181","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96089],"is_not":false,"summary":null,"term":"GO:0051403"},{"annotations":[88408,107108,98271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[103174,114380,103744,99936,91990,95566],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"A MAPK cascade that starts with the activation of a stress-activated MAP kinase cascade.","definition_xrefs":["GOC:ai","PMID:15936270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"is_a","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_01181":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03753":null,"SJAG_04503":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPK11 cascade","type":"narrow"},{"name":"MAPK12 cascade","type":"narrow"},{"name":"MAPK13 cascade","type":"narrow"},{"name":"MAPK14 cascade","type":"related"},{"name":"SAPK cascade","type":"broad"},{"name":"stress-activated MAPK signaling pathway","type":"exact"},{"name":"stress-activated MAPK signalling pathway","type":"exact"},{"name":"stress-activated MAPKKK cascade","type":"exact"},{"name":"stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0051403","terms_by_termid":{"GO:0000196":null,"GO:0051403":null,"GO:1903138":null}}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["PMID:11891195","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: PBO:0079575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D","termid":"PBO:0079575"}


id: GO:0030562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification guide activity","termid":"GO:0030556"},{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"rRNA 2'-O-ribose methylation guide activity","termid":"GO:0030562"}


id: PBO:0045447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD intronic transcript 1","termid":"PBO:0045447"}


id: GO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["GOC:jl","PMID:6794030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"pyochelin catabolic process","synonyms":[{"name":"pyochelin breakdown","type":"exact"},{"name":"pyochelin catabolism","type":"exact"},{"name":"pyochelin degradation","type":"exact"}],"termid":"GO:0042865"}


id: GO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location at the spindle pole body, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"},{"relation_name":"part_of","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0051179","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"maintenance of protein location to spindle pole body","synonyms":[{"name":"maintenance of protein location at spindle pole body","type":"exact"},{"name":"maintenance of protein location in spindle pole body","type":"exact"}],"termid":"GO:0071990"}


id: PBO:0053976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1288","termid":"PBO:0053976"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PR:Q9UT46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moc3 gene.","definition_xrefs":["UniProtKB:Q9UT46","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein moc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.07c","synonyms":[{"name":"Spom972h-moc3","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT46"}


id: PBO:0003856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa2","termid":"PBO:0003856"}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: PBO:0070319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 8","termid":"PBO:0070319"}


id: FYPO:0000350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology during vegetative growth","termid":"FYPO:0000352"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal actin cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000350"}


id: GO:0034719
data:
  {"annotated_genes":["SJAG_05195","SJAG_01301","SJAG_03323","SJAG_01870","SJAG_01217","SJAG_00147","SJAG_03894"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91313,101988,106758],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[105119,87791,92119,97425,100675],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of several methylated Sm proteins with the SMN complex; the latter contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and unrip proteins; additional proteins, including galectin-1 and galectin-3, are also found in the SMN-SM complex. The SMN-Sm complex is involved in spliceosomal snRNP assembly in the cytoplasm.","definition_xrefs":["PMID:11522829","GOC:vw","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01870":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"SMN-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034719","terms_by_termid":{"GO:0032797":null,"GO:0034719":null}}


id: GO:0062193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-ribopyranose = beta-D-ribofuranose.","definition_xrefs":["RHEA:25432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-ribose pyranase activity","secondary_identifiers":["EC:5.4.99.62"],"termid":"GO:0062193"}


id: PBO:0048214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho1","termid":"PBO:0048214"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: PBO:0058041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4262","termid":"PBO:0058041"}


id: PBO:0059362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 9","termid":"PBO:0059362"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: PBO:0065511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 1","termid":"PBO:0065511"}


id: PBO:0038756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 1","termid":"PBO:0038756"}


id: RO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any entity (e.g., an organism, organism population, or an organism part) that interacts with an exposure stimulus during the exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_receptor","termid":"RO:0002240"}


id: PBO:0091611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane purine transmembrane transporter","termid":"PBO:0091611"}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: GO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A respiratory chain located in the plasma membrane of a cell; made up of the protein complexes that form the electron transport system (the respiratory chain), associated with the plasma membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["GOC:imk","GOC:mah","ISBN:0198547684","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirasome","termid":"GO:0070469"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane respirasome","synonyms":[{"name":"plasma membrane electron transport chain","type":"exact"},{"name":"plasma membrane respiratory chain","type":"exact"}],"termid":"GO:0070470"}


id: PBO:0086203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; sumoylated under stress conditions in a genome wide study; YDR336W is not an essential gene","termid":"PBO:0086203"}


id: GO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung saccule from an initial condition to its mature state. The lung saccule is the primitive gas exchange portion of the lung composed of type I and type II cells.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung saccule development","synonyms":[{"name":"lung saccular development","type":"broad"}],"termid":"GO:0060430"}


id: GO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptide bonds in collagen with preferential cleavage where P1', P2' and P3' are hydrophobic residues; action on collagen types III, IV and V is weak.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 2 activity (obsolete GO:0030303)","synonyms":[{"name":"MMP-10","type":"exact"},{"name":"matrix metalloproteinase 10 activity","type":"related"},{"name":"proteoglycanase 2","type":"related"},{"name":"stromelysin 2 activity","type":"exact"},{"name":"transin 2 activity","type":"related"}],"termid":"GO:0030303"}


id: PBO:0048039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 2","termid":"PBO:0048039"}


id: PBO:0026642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_cell_cycle_regulated_gene_mRNA_during_vegetative_growth","termid":"PBO:0026642"}


id: GO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil degranulation","synonyms":[{"name":"activation of eosinophil degranulation","type":"narrow"},{"name":"positive regulation of eosinophil granule exocytosis","type":"exact"},{"name":"stimulation of eosinophil degranulation","type":"narrow"},{"name":"up regulation of eosinophil degranulation","type":"exact"},{"name":"up-regulation of eosinophil degranulation","type":"exact"},{"name":"upregulation of eosinophil degranulation","type":"exact"}],"termid":"GO:0043311"}


id: SO:1000099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The extension of the translational product at either (or both) the N-terminus and/or the C-terminus.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000099 sequence_variant_causing_polypeptide_elongation (obsolete SO:1000099)","synonyms":[{"name":"mutation causing polypeptide elongation","type":"related"},{"name":"sequence variant causing polypeptide elongation","type":"exact"}],"termid":"SO:1000099"}


id: PBO:0074318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 7","termid":"PBO:0074318"}


id: PBO:0011420
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011420"}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: PBO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil) methyltransferase (predicted)","termid":"PBO:0005583"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:21131906","PMID:22525225","PMID:22684255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991","GO:0005816"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: GO:0140068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + histone = CoA + crotonyl-histone.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide crotonyltransferase activity","termid":"GO:0140064"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone crotonyltransferase activity","termid":"GO:0140068"}


id: GO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pseudotropine = H+ + NADPH + tropinone.","definition_xrefs":["RHEA:24244","EC:1.1.1.236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tropinone reductase activity","secondary_identifiers":["KEGG_REACTION:R06734","MetaCyc:TROPINONE-REDUCTASE-RXN"],"synonyms":[{"name":"pseudotropine forming tropinone reductase activity","type":"related"},{"name":"pseudotropine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"tropinone (psi-tropine-forming) reductase activity","type":"related"},{"name":"tropinone reductase II activity","type":"related"}],"termid":"GO:0050358"}


id: GO:0061244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric S-shaped body is generated and organized. The mesonephric S-shaped body is the successor of the mesonephric comma-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-shaped body morphogenesis","termid":"GO:0072050"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric S-shaped body morphogenesis","termid":"GO:0061244"}


id: PBO:0079709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 3","termid":"PBO:0079709"}


id: GO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA/DNA hybrid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA/RNA hybrid binding","synonyms":[{"name":"RNA/DNA hybrid binding","type":"exact"}],"termid":"GO:0071667"}


id: GO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an leukemia inhibitory factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor binding","synonyms":[{"name":"leukemia inhibitory factor","type":"narrow"},{"name":"leukemia inhibitory factor receptor ligand","type":"narrow"}],"termid":"GO:0005146"}


id: GO:0033624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"negatively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin activation","synonyms":[{"name":"negative regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033624"}


id: MOD:00217
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-arabinosyl-L-hydroxyproline.","definition_xrefs":["RESID:AA0212","DeltaMass:0","PubMed:7852316","Unimod:408","PubMed:666730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O4-arabinosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-(beta-L-arabinofuranosyloxy)pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(beta-L-arabinofuranosyloxy)proline","type":"exact"},{"name":"4-Glycosyloxy- (pentosyl,C5) (of Proline)","type":"exact"},{"name":"Glycosyl","type":"related"},{"name":"O4-arabinosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"OAra4HyPro","type":"exact"},{"name":"beta-arabinofuranosyl-4-hydroxyproline","type":"exact"},{"name":"glycosyl-L-hydroxyproline","type":"related"}],"termid":"MOD:00217"}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: PBO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 2","termid":"PBO:0051888"}


id: GO:0007347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"modulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"preblastoderm mitotic cell cycle modulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulator","type":"related"},{"name":"regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0007347"}


id: PBO:0043673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORO1A antisense RNA 1","termid":"PBO:0043673"}


id: PBO:0091156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop7","termid":"PBO:0091156"}


id: PBO:0079654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 2","termid":"PBO:0079654"}


id: PBO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular leucine rich repeat and fibronectin type III domain containing 2","termid":"PBO:0046171"}


id: FYPO:0002347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is abnormal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal stress granule assembly","termid":"FYPO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal stress granule assembly during vegetative growth","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abnormal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002347"}


id: PBO:0029343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_tRNA_3'-end_processing","termid":"PBO:0029343"}


id: PBO:0041315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 1","termid":"PBO:0041315"}


id: PBO:0014289
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC15","termid":"PBO:0014289"}


id: GO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of gene products that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:dos","GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of contractile vacuolar membrane (obsolete GO:0031165)","synonyms":[{"name":"integral to contractile vacuolar membrane","type":"exact"}],"termid":"GO:0031165"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: PBO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein modifier, ubiquitin","termid":"PBO:0036403"}


id: GO:1901608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle transport along microtubule","synonyms":[{"name":"regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901608"}


id: PBO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 13","termid":"PBO:0052721"}


id: PBO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 3, Pup3 (predicted)","termid":"PBO:0005304"}


id: GO:0018770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2Z,4Z,7-trienoate + H2O = 2-(4'-chlorophenyl)-3,3-dichloropropenoate + cis-2-Hydroxy-3-chloropenta-2,4-dienone + H+.","definition_xrefs":["UM-BBD_reactionID:r0444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate hydrolase activity","termid":"GO:0018770"}


id: PBO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jrk helix-turn-helix protein","termid":"PBO:0052031"}


id: GO:1904650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["PMID:17024416","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"negatively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell apoptotic process","synonyms":[{"name":"down regulation of adipocyte apoptosis","type":"narrow"},{"name":"down regulation of adipocyte apoptotic process","type":"exact"},{"name":"down regulation of adipose cell apoptosis","type":"narrow"},{"name":"down regulation of adipose cell apoptotic process","type":"exact"},{"name":"down regulation of fat cell apoptosis","type":"narrow"},{"name":"down regulation of fat cell apoptotic process","type":"exact"},{"name":"down-regulation of adipocyte apoptosis","type":"narrow"},{"name":"down-regulation of adipocyte apoptotic process","type":"exact"},{"name":"down-regulation of adipose cell apoptosis","type":"narrow"},{"name":"down-regulation of adipose cell apoptotic process","type":"exact"},{"name":"down-regulation of fat cell apoptosis","type":"narrow"},{"name":"down-regulation of fat cell apoptotic process","type":"exact"},{"name":"downregulation of adipocyte apoptosis","type":"narrow"},{"name":"downregulation of adipocyte apoptotic process","type":"exact"},{"name":"downregulation of adipose cell apoptosis","type":"narrow"},{"name":"downregulation of adipose cell apoptotic process","type":"exact"},{"name":"downregulation of fat cell apoptosis","type":"narrow"},{"name":"downregulation of fat cell apoptotic process","type":"exact"},{"name":"inhibition of adipocyte apoptosis","type":"narrow"},{"name":"inhibition of adipocyte apoptotic process","type":"narrow"},{"name":"inhibition of adipose cell apoptosis","type":"narrow"},{"name":"inhibition of adipose cell apoptotic process","type":"narrow"},{"name":"inhibition of fat cell apoptosis","type":"narrow"},{"name":"inhibition of fat cell apoptotic process","type":"narrow"},{"name":"negative regulation of adipocyte apoptosis","type":"narrow"},{"name":"negative regulation of adipocyte apoptotic process","type":"exact"},{"name":"negative regulation of adipose cell apoptosis","type":"narrow"},{"name":"negative regulation of adipose cell apoptotic process","type":"exact"},{"name":"negative regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904650"}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: PBO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 18","termid":"PBO:0050240"}


id: GO:0045620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte differentiation","termid":"GO:1902106"},{"relation_name":"negatively_regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte differentiation","synonyms":[{"name":"down regulation of lymphocyte differentiation","type":"exact"},{"name":"down-regulation of lymphocyte differentiation","type":"exact"},{"name":"downregulation of lymphocyte differentiation","type":"exact"},{"name":"inhibition of lymphocyte differentiation","type":"narrow"},{"name":"negative regulation of lymphocyte development","type":"related"}],"termid":"GO:0045620"}


id: PBO:0030955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030955"}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: FYPO:0006864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to streptonigrin. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to streptonigrin (obsolete FYPO:0006864)","synonyms":[{"name":"cut during cellular response to rufocromomycin","type":"exact"},{"name":"cut during cellular response to streptonigrin during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to streptonigrin during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to streptonigrin","type":"exact"}],"termid":"FYPO:0006864"}


id: FYPO:0000444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have replicated genomic DNA, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with replicated DNA","synonyms":[{"name":"abnormal cell cycle arrest with replicated DNA during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with 2C DNA content","type":"narrow"},{"name":"abnormal mitotic cell cycle arrest with replicated DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000444"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: PBO:0063227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 X-linked","termid":"PBO:0063227"}


id: GO:0032588
data:
  {"annotated_genes":["SJAG_03953","SJAG_02912","SJAG_00296","SJAG_05330","SJAG_02168"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86899,87365,89352,91873,103497],"is_not":false,"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"trans-Golgi network","termid":"GO:0005802"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_02168":null,"SJAG_02912":null,"SJAG_03953":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi trans face membrane","type":"related"},{"name":"trans Golgi network membrane","type":"exact"}],"termid":"GO:0032588","terms_by_termid":{"GO:0032588":null}}


id: GO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the bacterial pre-replicative complex, a protein-DNA complex that forms at the bacterial oriC during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["PMID:19833870","PMID:21895796","GOC:bhm","GOC:jh2","GOC:bf","PMID:21035377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in bacterial-type DNA replication","synonyms":[{"name":"bacterial pre-RC assembly","type":"exact"},{"name":"bacterial pre-replicative complex assembly","type":"exact"}],"termid":"GO:0036390"}


id: PBO:0073654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM1 antisense RNA 1","termid":"PBO:0073654"}


id: PBO:0083614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-related GTPase involved in mitochondrial organization; required for mitochondrial fission and inheritance; self assembles on the cytoplasmic face of mitochondrial tubules at sites where division will occur; participates in endocytosis and regulates peroxisome fission along with Vps1p; mutants in the human ortholog DNM1L, which mediates mitochondrial fission, peroxisomal division, autophagy, and mitophagy, are associated with slowly progressive infantile encephalopathy","termid":"PBO:0083614"}


id: PBO:0088224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase (mitofusin) Fzo1","termid":"PBO:0088224"}


id: PBO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunity Seh1","termid":"PBO:0014249"}


id: PBO:0057040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 132","termid":"PBO:0057040"}


id: GO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein involved in an antiviral response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete antiviral response protein activity (obsolete GO:0003800)","synonyms":[{"name":"antiviral response protein activity","type":"exact"}],"termid":"GO:0003800"}


id: PBO:0053677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 862","termid":"PBO:0053677"}


id: GO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids in the intestine to form a chylomicron.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"chylomicron assembly","termid":"GO:0034378"}


id: GO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to a cis-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:18952572","PMID:10681399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid monooxygenase activity","termid":"GO:0008391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid epoxygenase activity","secondary_identifiers":["Reactome:R-HSA-211983"],"synonyms":[{"name":"cytochrome P450 CYP2J5","type":"narrow"},{"name":"cytochrome P450 CYP2J6","type":"narrow"}],"termid":"GO:0008392"}


id: PBO:0062005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 5 pseudogene","termid":"PBO:0062005"}


id: PBO:0089141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Deb1/Rdp1","termid":"PBO:0089141"}


id: PBO:0039970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 1","termid":"PBO:0039970"}


id: PBO:0048944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 2","termid":"PBO:0048944"}


id: GO:0102635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone + NADH + H+ = 4-pregnen-20,21-diol-3-one + NAD.","definition_xrefs":["GOC:pz","HEA:47716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"11-deoxycorticosterone reductase activity","secondary_identifiers":["RHEA:47716","MetaCyc:RXN-15607"],"termid":"GO:0102635"}


id: PBO:0011461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit Taf12","termid":"PBO:0011461"}


id: PBO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1 (predicted)","termid":"PBO:0017633"}


id: PBO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible horizontal transfer","termid":"PBO:0000085"}


id: GO:0043694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenes, terpenes with a C10 structure.","definition_xrefs":["PMID:25076942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"monoterpene catabolic process","synonyms":[{"name":"monoterpene catabolism","type":"exact"}],"termid":"GO:0043694"}


id: GO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 23 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K23 acetylation (obsolete GO:0043972)","synonyms":[{"name":"histone H3 acetylation at K23","type":"exact"},{"name":"histone H3K23 acetylation","type":"exact"}],"termid":"GO:0043972"}


id: PBO:0069783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1068, pseudogene","termid":"PBO:0069783"}


id: GO:0016404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+.","definition_xrefs":["EC:1.1.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-2161779","MetaCyc:1.1.1.141-RXN","Reactome:R-HSA-9024766","Reactome:R-HSA-9023968","Reactome:R-HSA-2161662","RHEA:11876"],"synonyms":[{"name":"(5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"15-OH-PGDH","type":"related"},{"name":"15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"15-hydroxyprostanoic dehydrogenase activity","type":"related"},{"name":"NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I)","type":"related"},{"name":"NAD-specific 15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"prostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0016404"}


id: PBO:0073628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 12","termid":"PBO:0073628"}


id: PBO:0004259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family protein Mlh1 (predicted)","termid":"PBO:0004259"}


id: GO:0034233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cell wall chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall chitin metabolic process","termid":"GO:0034222"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cell wall chitin catabolic process","termid":"GO:0006039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall chitin catabolic process","synonyms":[{"name":"regulation of cell wall chitin breakdown","type":"exact"},{"name":"regulation of cell wall chitin catabolism","type":"exact"},{"name":"regulation of cell wall chitin degradation","type":"exact"}],"termid":"GO:0034233"}


id: GO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form peptidyl-N6-1-carboxyethyl-L-lysine.","definition_xrefs":["RESID:AA0115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine carboxyethylation","secondary_identifiers":["GO:0018239"],"synonyms":[{"name":"protein amino acid carboxyethylation","type":"exact"}],"termid":"GO:0018238"}


id: PBO:0073411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 15","termid":"PBO:0073411"}


id: PBO:0079524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase related protein 1","termid":"PBO:0079524"}


id: PR:P40233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki1 gene.","definition_xrefs":["UniProtKB:P40233","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.06c","synonyms":[{"name":"SPBC1347.06c","type":"related"},{"name":"Spom972h-cki1","type":"exact"}],"termid":"PR:P40233"}


id: PBO:0087048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L22A; required for translation of long 5' UTR of IME1 mRNA and meiotic entry; required for the oxidative stress response, pseudohyphal and invasive growth; homologous to mammalian ribosomal protein L22, no bacterial homolog; RPL22A has a paralog, RPL22B, that arose from the whole genome duplication","termid":"PBO:0087048"}


id: PBO:0004806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose methyltransferase (predicted)","termid":"PBO:0004806"}


id: PBO:0059573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X pseudogene 1","termid":"PBO:0059573"}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0053510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 498","termid":"PBO:0053510"}


id: PBO:0109002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 2","termid":"PBO:0109002"}


id: GO:0048312
data:
  {"annotated_genes":["SJAG_04003","SJAG_01741","SJAG_02384","SJAG_02848","SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96076,98892,103342,103555,107004],"is_not":false,"summary":null,"term":"GO:0048312"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria within the cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular distribution of mitochondria","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria positioning within cell","type":"exact"},{"name":"mitochondrion positioning within cell","type":"exact"}],"termid":"GO:0048312","terms_by_termid":{"GO:0048312":null}}


id: GO:0018993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in an organism's soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sex determination","termid":"GO:0018993"}


id: PR:000085732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Ser-11, MOD:00046","type":"related"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Ser-11, MOD:00046","type":"related"},{"name":"hht1/Phos(S10)","type":"exact"}],"termid":"PR:000085732"}


id: GO:0042762
data:
  {"annotated_genes":["SJAG_01187","SJAG_03538","SJAG_02380","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107497,111585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[85216,109812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of sulfur metabolism","type":"exact"},{"name":"regulation of sulphur metabolic process","type":"exact"},{"name":"regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0042762","terms_by_termid":{"GO:0090180":null,"GO:2001211":null}}


id: PBO:0056891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1IP1 antisense RNA 1","termid":"PBO:0056891"}


id: PBO:0066117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 11 member A","termid":"PBO:0066117"}


id: PBO:0064912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 1","termid":"PBO:0064912"}


id: PBO:0038424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin like 1","termid":"PBO:0038424"}


id: PBO:0052195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMB3 pseudogene 1","termid":"PBO:0052195"}


id: GO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a sodium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium ion uniporter activity","termid":"GO:0022818"}


id: GO:0051067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6,7-dihydropteridine, a bicyclic compound with the formula C6H6N4.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydropteridine metabolic process","synonyms":[{"name":"6,7-dihydropteridine metabolic process","type":"exact"},{"name":"dihydropteridine metabolism","type":"exact"},{"name":"dihydropteridine reduction","type":"narrow"}],"termid":"GO:0051067"}


id: PBO:0055759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA radiation induced regulator of PLK1 and RAD51","termid":"PBO:0055759"}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:20711475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: PBO:0081322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 112","termid":"PBO:0081322"}


id: GO:0097756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood vessel diameter (obsolete GO:0097756)","synonyms":[{"name":"negative regulation of vasodilation","type":"related"}],"termid":"GO:0097756"}


id: PBO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine ammonia-lyase Tda1","termid":"PBO:0018066"}


id: PBO:0013751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 14-demethylase Erg11 (predicted)","termid":"PBO:0013751"}


id: FYPO:0004200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein degradation during vegetative growth","termid":"FYPO:0000847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation during mitotic G1 phase","synonyms":[{"name":"increased protein breakdown during mitotic G1 phase","type":"exact"},{"name":"increased protein catabolic process during mitotic G1 phase","type":"exact"},{"name":"increased protein catabolism during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased protein degradation during G1 phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004200"}


id: PBO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0032724"}


id: GO:0005480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0005480)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0005480"}


id: MOD:01507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889#N-term","OMSSA:211","OMSSA:176","Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on nterm","type":"exact"}],"termid":"MOD:01507"}


id: PBO:0065534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 1","termid":"PBO:0065534"}


id: GO:0018338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein amino acid by cinnamylation.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid cinnamylation (obsolete GO:0018338)","synonyms":[{"name":"protein amino acid cinnamylation","type":"exact"}],"termid":"GO:0018338"}


id: PBO:0066559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 22","termid":"PBO:0066559"}


id: PBO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck1","termid":"PBO:0001534"}


id: PBO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transporter Sut1","termid":"PBO:0002295"}


id: GO:0004300
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a enoyl-CoA + H2O. This reaction usually occurs in the reverse direction, leading to the reduction of the double bound of enoyl-CoA in position 2 or 3. Specific reactions catalyzed include: a 4-saturated-(3S)-3-hydroxyacyl-CoA = a (3E)-enoyl-CoA + H2O and a (3S)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"enoyl-CoA hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_enzymeID:e0014","GO:0016510","Reactome:R-HSA-70870","Reactome:R-HSA-77277","Reactome:R-HSA-70830","Reactome:R-HSA-77325","Reactome:R-HSA-77256","MetaCyc:ENOYL-COA-HYDRAT-RXN","Reactome:R-HSA-77344","Reactome:R-HSA-77333","Reactome:R-HSA-77301","Reactome:R-HSA-77314"],"synonyms":[{"name":"(3S)-3-hydroxyacyl-CoA hydro-lyase activity","type":"related"},{"name":"2-enoyl-CoA hydratase activity","type":"related"},{"name":"2-octenoyl coenzyme A hydrase activity","type":"related"},{"name":"3-hydroxy-fatty acyl-CoA dehydratase","type":"exact"},{"name":"3-hydroxyacyl-CoA dehydratase","type":"exact"},{"name":"acyl coenzyme A hydrase activity","type":"related"},{"name":"beta-hydroxyacid dehydrase activity","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrase activity","type":"related"},{"name":"enol-CoA hydratase activity","type":"related"},{"name":"enoyl hydrase activity","type":"related"},{"name":"short-chain enoyl-CoA hydratase activity","type":"exact"},{"name":"unsaturated acyl-CoA hydratase activity","type":"related"}],"termid":"GO:0004300","terms_by_termid":{"GO:0102158":null}}


id: PBO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisomal_transport","termid":"PBO:0031688"}


id: GO:0036410
data:
  {"annotated_genes":["SJAG_04815","SJAG_01385","SJAG_02165","SJAG_02629"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86916,95795,100551,101427],"is_not":false,"summary":null,"term":"GO:0036410"}]},"cv_name":"cellular_component","definition":"A protein complex that can catalyze the acetylation of lysine at position 14 in histone H3, and contains Mst2 as the catalytic subunit. In fission yeast, contains at least Mst2, Nto1, Ptf2, Ptf1 and Eaf6.","definition_xrefs":["PMID:21289066","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3-K14 acetyltransferase complex","termid":"GO:0036409"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Mst2 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mst2 H3K14 acetyltransferase complex","type":"exact"},{"name":"Mst2 complex","type":"exact"},{"name":"Mst2 histone H3K14 acetyltransferase complex","type":"exact"}],"termid":"GO:0036410","terms_by_termid":{"GO:0036410":null}}


id: GO:0019312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-sorbose metabolic process","secondary_identifiers":["MetaCyc:P302-PWY"],"synonyms":[{"name":"L-sorbose metabolism","type":"exact"}],"termid":"GO:0019312"}


id: PBO:0065543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreas associated transcription factor 1a","termid":"PBO:0065543"}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:22314799","PMID:19506555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: PBO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine salvage protein","termid":"PBO:0016056"}


id: PBO:0078550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 40","termid":"PBO:0078550"}


id: FYPO:0001596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which amino acid import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal amino acid import","synonyms":[{"name":"normal amino acid import across plasma membrane","type":"exact"},{"name":"normal amino acid import during mitotic cell cycle","type":"related"},{"name":"normal amino acid import during vegetative growth","type":"exact"},{"name":"normal amino acid import into cell","type":"exact"},{"name":"normal amino acid uptake","type":"exact"}],"termid":"FYPO:0001596"}


id: GO:2000432
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"negatively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000432","terms_by_termid":{"GO:1903500":null}}


id: PBO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 1","termid":"PBO:0075508"}


id: PBO:0041502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf75 antisense RNA 1","termid":"PBO:0041502"}


id: GO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away.","definition_xrefs":["GOC:mah","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"zygospore formation","termid":"GO:0034296"}


id: GO:0141114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host.","definition_xrefs":["PMID:20194595","PMID:25830295"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host complement activation (obsolete GO:0141114)","synonyms":[{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0141114"}


id: PBO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.3","termid":"PBO:0005340"}


id: PBO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 48","termid":"PBO:0045858"}


id: PBO:0110561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol synthase (CDP-diacylglycerol--inositol 3-phosphatidyltransferase) Pis1","termid":"PBO:0110561"}


id: PBO:0038615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme","termid":"PBO:0038615"}


id: CHEBI:17634
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-glucose","termid":"CHEBI:17634"}


id: GO:0071666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-carbohydrate complex that consists of a transmembrane roundabout (Robo) receptor, an extracellular Slit ligand and heparin/heparan sulfate.","definition_xrefs":["GOC:sart","PMID:17062560","PMID:18359766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-carbohydrate complex","termid":"GO:0032992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Slit-Robo signaling complex","synonyms":[{"name":"Slit-Robo signalling complex","type":"exact"}],"termid":"GO:0071666"}


id: PBO:0041221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 1","termid":"PBO:0041221"}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: PBO:0069046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 291, pseudogene","termid":"PBO:0069046"}


id: PBO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT5A pseudogene 3","termid":"PBO:0052575"}


id: GO:0035964
data:
  {"annotated_genes":["SJAG_04391","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89359,113824],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of a Golgi membrane, resulting in formation of a COPI-coated vesicle.","definition_xrefs":["PMID:10052452","GOC:br","PMID:17041781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"COPI-coated vesicle budding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"COPI vesicle budding","type":"exact"}],"termid":"GO:0035964","terms_by_termid":{"GO:0048205":null}}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: PBO:0048167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy and cell division cycle 20 related 1","termid":"PBO:0048167"}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: GO:0016858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Racemase and epimerase activity on compounds other than amino acids, hydroxy acids, carbohydrates or their derivatives.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase and epimerase activity, acting on other compounds (obsolete GO:0016858)","synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"exact"}],"termid":"GO:0016858"}


id: GO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse maturation","termid":"GO:0090128"}


id: PATO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000494 period value (obsolete PATO:0000494)","termid":"PATO:0000494"}


id: GO:1903031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule plus-end binding.","definition_xrefs":["PMID:16148041","GOC:hjd","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule plus-end binding","termid":"GO:1903031"}


id: PBO:0063706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 1","termid":"PBO:0063706"}


id: PBO:0054843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2257","termid":"PBO:0054843"}


id: SO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 57 to 71 nucleotide RNA that is a component of the U7 small nuclear ribonucleoprotein complex (U7 snRNP). The U7 snRNP is required for histone pre-mRNA processing.","definition_xrefs":["PMID:15526162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U7_snRNA","synonyms":[{"name":"U7 small nuclear RNA","type":"exact"},{"name":"U7 snRNA","type":"exact"},{"name":"small nuclear RNA U7","type":"exact"},{"name":"snRNA U7","type":"exact"}],"termid":"SO:0002338"}


id: PBO:0087409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-specific adaptor protein involved in apo-Rli1p maturation; subunit of the Yae1-Lto1 complex, recruiting apo-Rli1p to the CIA targeting complex, facilitating the insertion of an Fe/S cluster by the Fe-S biosynthetic machinery; deca-GX3 motif crucial for complex formation; essential for aerobic but not anaerobic growth; homolog of human YAE1D1, which is overexpressed in oral cancers; co-expression of YAE1D1 and LTO1 homolog ORAOV1 restores growth and Rli1p maturation after YAE1 depletion","termid":"PBO:0087409"}


id: GO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"negatively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uredospore formation","synonyms":[{"name":"negative regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075254"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: PBO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 12","termid":"PBO:0075242"}


id: PBO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily J member 2","termid":"PBO:0044412"}


id: PBO:0041855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3","termid":"PBO:0041855"}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: PR:Q8WZJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member B1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10778:SF10","PRO:DNx","OMA:SCHPO02527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.11c","secondary_identifiers":["UniProtKB:Q8WZJ9"],"synonyms":[{"name":"Spom972h-SLC35B1","type":"exact"}],"termid":"PR:Q8WZJ9"}


id: GO:0047333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydrostreptomycin 6-phosphate = ADP + dihydrostreptomycin 3'alpha,6-bisphosphate + 2 H+.","definition_xrefs":["RHEA:16281","EC:2.7.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrostreptomycin-6-phosphate 3'-alpha-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.88-RXN","KEGG_REACTION:R03395"],"synonyms":[{"name":"ATP:dihydrostreptomycin-6-P 3'alpha-phosphotransferase activity","type":"related"},{"name":"ATP:dihydrostreptomycin-6-phosphate 3'alpha-phosphotransferase activity","type":"related"},{"name":"dihydrostreptomycin 6-phosphate kinase (phosphorylating)","type":"related"},{"name":"dihydrostreptomycin-6-phosphate 3'alpha-kinase activity","type":"related"}],"termid":"GO:0047333"}


id: PBO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex STAG protein Rec11","termid":"PBO:0090291"}


id: GO:0008979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of prophage DNA into a target DNA molecule, usually a bacterial chromosome, via a sequence-specific recombination event which involves the formation of an intasome, a DNA-protein-complex designed for site-specific recombination of the phage and host DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"prophage integrase activity","synonyms":[{"name":"integrase activity involved in establishment of integrated proviral latency","type":"exact"}],"termid":"GO:0008979"}


id: GO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutive glucose:proton symporter activity (obsolete GO:0005357)","synonyms":[{"name":"constitutive hydrogen/glucose transporter activity","type":"broad"},{"name":"constitutive hydrogen:glucose symporter activity","type":"exact"},{"name":"constitutive hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005357"}


id: GO:0045626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell differentiation","synonyms":[{"name":"down regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"down-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"downregulation of T-helper 1 cell differentiation","type":"exact"},{"name":"inhibition of T-helper 1 cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045626"}


id: PBO:0055975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 1","termid":"PBO:0055975"}


id: PBO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged DNA binding protein Ddb1","termid":"PBO:0001289"}


id: GO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vasoconstriction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasoconstriction","synonyms":[{"name":"down regulation of vasoconstriction","type":"exact"},{"name":"down-regulation of vasoconstriction","type":"exact"},{"name":"downregulation of vasoconstriction","type":"exact"},{"name":"inhibition of vasoconstriction","type":"narrow"}],"termid":"GO:0045906"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["PMID:17765709","PMID:20554881","NIF_Subcellular:nlx_subcell_100312","PMID:24336151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00563","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: PBO:0040331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 6","termid":"PBO:0040331"}


id: PBO:0045811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 1","termid":"PBO:0045811"}


id: PBO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb6","termid":"PBO:0090692"}


id: FYPO:0004053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ultraviolet light. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to UV (obsolete FYPO:0004053)","synonyms":[{"name":"cut during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to UV during vegetative growth","type":"exact"},{"name":"cut during cellular response to ultraviolet light","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to UV","type":"exact"}],"termid":"FYPO:0004053"}


id: GO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"positive regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010726"}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: PBO:0060300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 10","termid":"PBO:0060300"}


id: PBO:0067131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 178, pseudogene","termid":"PBO:0067131"}


id: PBO:0085914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YOR019W has a paralog, JIP4, that arose from the whole genome duplication","termid":"PBO:0085914"}


id: PBO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFTPH divergent transcript","termid":"PBO:0039020"}


id: GO:0070513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a death domain of a protein. The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD bind each other forming oligomers. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB.","definition_xrefs":["GOC:BHF","Pfam:PF00531","InterPro:IPR000488","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"death domain binding","termid":"GO:0070513"}


id: GO:0052786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of large alpha-linked polysaccharides by hydrolysis of (1->4)-alpha-D-glucosidic linkages to yield maltotriose.","definition_xrefs":["GOC:mengo_curators","PMID:7511484","PMID:9406414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-linked polysaccharide catabolism to maltotriose","synonyms":[{"name":"alpha-amylase-mediated polysaccharide catabolism, producing maltotriose","type":"exact"},{"name":"maltotriose-forming alpha-amylase activity","type":"related"}],"termid":"GO:0052786"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:12681491","PMID:22247542","PMID:22968831","RHEA:59740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: PBO:0059908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 31","termid":"PBO:0059908"}


id: PBO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit gamma","termid":"PBO:0060972"}


id: PBO:0110982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein implicated in signalling; DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0110982"}


id: GO:0071057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:10944520","PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-ADAM15 complex","synonyms":[{"name":"ITGAV-ITGB3-ADAM15 complex","type":"narrow"}],"termid":"GO:0071057"}


id: PBO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein (predicted)","termid":"PBO:0001123"}


id: SO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dispersed repeat family with many copies, each from 1 to 6 kb long. New elements are generated by retroposition of a transcribed copy. Typically the LINE contains 2 ORF's one of which is reverse transcriptase, and 3'and 5' direct repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE_element","synonyms":[{"name":"LINE","type":"exact"},{"name":"LINE element","type":"exact"},{"name":"Long interspersed element","type":"exact"},{"name":"Long interspersed nuclear element","type":"exact"}],"termid":"SO:0000194"}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:pm","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: PBO:0083719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER quality-control lectin; integral subunit of the HRD ligase; participates in efficient ER retention of misfolded proteins by recognizing them and delivering them to Hrd1p; binds to glycans with terminal alpha-1,6 linked mannose on misfolded N-glycosylated proteins and participates in targeting proteins to ERAD; member of the OS-9 protein family","termid":"PBO:0083719"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: PBO:0070617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 1","termid":"PBO:0070617"}


id: MOD:00013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-aspartic acid.","definition_xrefs":["PubMed:8089117","PubMed:5764436","PubMed:9521123","RESID:AA0004","DeltaMass:0","PubMed:9582379","ChEBI:29958","PubMed:1097438","PubMed:339692","PubMed:4399050","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid residue","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"Asp","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:00013"}


id: PBO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp109","termid":"PBO:0004950"}


id: GO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein complex","termid":"GO:0017133"}


id: PBO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 40","termid":"PBO:0071199"}


id: PBO:0016561
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Giardia lamblia single peptide cis-prenyltransferase","termid":"PBO:0016561"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: GO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate via the intermediates mesaconate and S-citramalate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:GLUDEG-II-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0006091","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process via mesaconate and citramalate","secondary_identifiers":["MetaCyc:PWY-5087","MetaCyc:PWY-5088"],"synonyms":[{"name":"glutamate fermentation via mesaconate and citramalate","type":"exact"}],"termid":"GO:0019671"}


id: PR:Q9UT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00681","PANTHER:PTHR10233:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.14c","secondary_identifiers":["UniProtKB:Q9UT76"],"synonyms":[{"name":"Spom972h-EIF2B2","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT76"}


id: PATO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"buoyancy","termid":"PATO:0001420"}


id: GO:0007305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitelline membrane formation","termid":"GO:0030704"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"vitelline membrane formation involved in chorion-containing eggshell formation","synonyms":[{"name":"vitelline membrane formation in chorion-containing eggshell","type":"exact"}],"termid":"GO:0007305"}


id: GO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-bisphosphoglycerate + H2O = (2R)-2-phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611","RHEA:27381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"bisphosphoglycerate 3-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R09532","MetaCyc:RXN-11102","EC:3.1.3.80"],"synonyms":[{"name":"2,3-bisphospho-D-glycerate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0034417"}


id: GO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C2 complex (obsolete GO:0005603)","synonyms":[{"name":"complement component C2 complex","type":"exact"}],"termid":"GO:0005603"}


id: GO:0141051
data:
  {"annotated_genes":["SJAG_00581","SJAG_03627","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[93364,100325,105610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[100328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine + H2O = histone H4 L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone H4.","definition_xrefs":["PMID:12590135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0033558","GO:0140096","GO:0019213","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"histone H4K deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141051","terms_by_termid":{"GO:0034739":null,"GO:0046970":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: PBO:0030136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_S_phase","termid":"PBO:0030136"}


id: GO:0031811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor binding","synonyms":[{"name":"G-protein coupled nucleotide receptor binding","type":"exact"},{"name":"P2Y receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031811"}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["RHEA:24412","EC:1.1.1.257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0291","KEGG_REACTION:R05271","MetaCyc:SOLDEHYD-RXN"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: PBO:0038780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 2B","termid":"PBO:0038780"}


id: FYPO:0005412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiosis II","synonyms":[{"name":"delayed meiosis II","type":"exact"},{"name":"delayed onset of second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005412"}


id: GO:0102701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = tricyclene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"tricyclene synthase activity","secondary_identifiers":["MetaCyc:RXN-5121","RHEA:32687"],"termid":"GO:0102701"}


id: GO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A small peptide excreted by a naturally transformable bacterium (e.g. Bacillus subtilis) that transmits a signal required for the establishment of competence.","definition_xrefs":["PMID:7698645","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0003674","GO:0005488","GO:0005186","GO:0098772"],"is_obsolete":false,"name":"competence pheromone activity","termid":"GO:0030413"}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: PBO:0069886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1175, pseudogene","termid":"PBO:0069886"}


id: PBO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin/PY protein involved in ubiquitin-mediated endocytosis Rod1 (predicted)","termid":"PBO:0017516"}


id: PBO:0049721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS5 divergent transcript","termid":"PBO:0049721"}


id: PBO:0059105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 1","termid":"PBO:0059105"}


id: PBO:0091515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein UBiquitin ligase","termid":"PBO:0091515"}


id: PBO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.4","termid":"PBO:0000585"}


id: PBO:0048085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 6","termid":"PBO:0048085"}


id: PBO:0041268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 1","termid":"PBO:0041268"}


id: PR:P36620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv1 gene.","definition_xrefs":["UniProtKB:P36620","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.07","synonyms":[{"name":"AHAS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ALS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilv1","type":"exact"},{"name":"acetohydroxy-acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36620"}


id: PBO:0086277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL2 has a paralog, SOL1, that arose from the whole genome duplication","termid":"PBO:0086277"}


id: GO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process (obsolete GO:0042136)","synonyms":[{"name":"neurotransmitter anabolism","type":"exact"},{"name":"neurotransmitter biosynthesis","type":"exact"},{"name":"neurotransmitter biosynthesis and storage","type":"broad"},{"name":"neurotransmitter biosynthetic process and storage","type":"broad"},{"name":"neurotransmitter formation","type":"exact"},{"name":"neurotransmitter synthesis","type":"exact"}],"termid":"GO:0042136"}


id: GO:0006997
data:
  {"annotated_genes":["SJAG_04464","SJAG_00840","SJAG_04489","SJAG_03940","SJAG_01906","SJAG_01467","SJAG_01579","SJAG_03844","SJAG_04319","SJAG_01745","SJAG_03592","SJAG_04936","SJAG_00883","SJAG_01613","SJAG_01460","SJAG_03891","SJAG_01370","SJAG_01050","SJAG_03073","SJAG_01356","SJAG_03783","SJAG_00810","SJAG_04972","SJAG_01242","SJAG_03182","SJAG_01422","SJAG_00416","SJAG_04578","SJAG_02763","SJAG_04271","SJAG_03593","SJAG_03449","SJAG_02210","SJAG_03982","SJAG_02778","SJAG_04509","SJAG_03892","SJAG_01834","SJAG_00934","SJAG_03313","SJAG_03219","SJAG_03200","SJAG_02045","SJAG_04883","SJAG_02737","SJAG_02286","SJAG_00900","SJAG_03491","SJAG_05207","SJAG_01075","SJAG_00680","SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113051,84718,87532,87153,83959,95346,107589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[89980,97559],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[94495,106048,93824,84092,106455,89189],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[106597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[107141,115606,115609,115589],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[84152,92106,99276,99861,87490,94097,102689,115469,115470,115471,97015,115472],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99797],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[115614,108871,99862,87874,96722,106456,106598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006998"},{"annotations":[87491,114236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[84719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[99590,85254,87492,105868,88089,115178,87606,103857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[92779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"},{"annotations":[103901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"},{"annotations":[112577,102278,86304,103905,87862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006999"},{"annotations":[110541,103365,100221,109423,88220,104294,108236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["GOC:mah","GOC:ems","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00883":null,"SJAG_00900":null,"SJAG_00934":null,"SJAG_01050":null,"SJAG_01075":null,"SJAG_01242":null,"SJAG_01356":null,"SJAG_01370":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01579":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01906":null,"SJAG_02045":null,"SJAG_02210":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_02763":null,"SJAG_02778":null,"SJAG_03073":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03593":null,"SJAG_03783":null,"SJAG_03844":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_03982":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04936":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"secondary_identifiers":["GO:0048287"],"synonyms":[{"name":"nuclear morphology","type":"related"},{"name":"nuclear organisation","type":"exact"},{"name":"nuclear organization","type":"exact"},{"name":"nuclear organization and biogenesis","type":"related"},{"name":"nucleus organization and biogenesis","type":"related"}],"termid":"GO:0006997","terms_by_termid":{"GO:0000183":null,"GO:0000742":null,"GO:0006998":null,"GO:0006999":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0051292":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: FYPO:0003088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork arrest","synonyms":[{"name":"abnormal replication fork arrest during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest during vegetative growth","type":"exact"}],"termid":"FYPO:0003088"}


id: PBO:0079435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 3","termid":"PBO:0079435"}


id: FYPO:0003264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis I. The order of nuclei in the resulting ascus differs from normal as a result.","definition_xrefs":["PomBase:mah","PMID:24196444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000120","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"overlapping meiosis I spindles","synonyms":[{"name":"overlapping spindles at meiosis I","type":"exact"},{"name":"overlapping spindles during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003264"}


id: GO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminoimidazole ribonucleotide + S-adenosylmethionine = 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate + 5'deoxyadenosine.","definition_xrefs":["PMID:18953358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity","synonyms":[{"name":"HMP-P synthase activity","type":"exact"},{"name":"ThiC","type":"related"}],"termid":"GO:0070284"}


id: PBO:0052082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin interacting protein","termid":"PBO:0052082"}


id: PBO:0036122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_from_spindle_pole_body_during_mitotic_interphase","termid":"PBO:0036122"}


id: PBO:0082151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase that converts diacylglycerol to triacylglycerol (TGA); one of several acyltransferases that contribute to TGA synthesis; relocates from ER to nuclear membrane in response cell cycle and starvation signals; Lro1p and Dga1p can O-acylate ceramides; putative homolog of human lecithin cholesterol acyltransferase","termid":"PBO:0082151"}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: GO:0030112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A carbohydrate rich layer at the outermost periphery of a cell.","definition_xrefs":["PMID:28876829","ISBN:0815316208","GOC:mlg","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glycocalyx","secondary_identifiers":["Wikipedia:Glycocalyx"],"termid":"GO:0030112"}


id: GO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["EC:1.16.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete multicopper ferroxidase iron transport mediator activity (obsolete GO:0004323)","synonyms":[{"name":"multicopper ferroxidase iron transport mediator activity","type":"exact"}],"termid":"GO:0004323"}


id: GO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the myelin sheath in which layers of cell membrane are tightly juxtaposed, completely excluding cytoplasm. The juxtaposed cytoplasmic surfaces form the major dense line, while the juxtaposed extracellular surfaces form the interperiod line visible in electron micrographs.","definition_xrefs":["NIF_Subcellular:sao1123256993","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"compact myelin","synonyms":[{"name":"Schwann cell compact myelin","type":"narrow"},{"name":"oligodendrocyte compact myelin","type":"narrow"}],"termid":"GO:0043218"}


id: GO:0030896
data:
  {"annotated_genes":["SJAG_03026","SJAG_02771","SJAG_01605"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87568,88663,95307],"is_not":false,"summary":null,"term":"GO:0030896"}]},"cv_name":"cellular_component","definition":"Conserved heterotrimeric complex of PCNA-like proteins that is loaded onto DNA at sites of DNA damage.","definition_xrefs":["PMID:12531008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01605":null,"SJAG_02771":null,"SJAG_03026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"checkpoint clamp complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CCC","type":"exact"},{"name":"Rad9-Hus1-Rad1 (9-1-1) clamp complex","type":"exact"}],"termid":"GO:0030896","terms_by_termid":{"GO:0030896":null}}


id: PBO:0085582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 7-aminocholesterol resistance; has seven potential membrane-spanning regions; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of protein; RTA1 has a paralog, YLR046C, that arose from the whole genome duplication","termid":"PBO:0085582"}


id: PBO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted)","termid":"PBO:0005196"}


id: FYPO:0006446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in the mitochondrion is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pre-mRNA level","termid":"FYPO:0001908"},{"relation_name":"is_a","term_name":"increased mitochondrial RNA level","termid":"FYPO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mitochondrial pre-mRNA level","synonyms":[{"name":"accumulation of mitochondrial pre-mRNA transcripts","type":"related"},{"name":"increased mitochondrial pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial pre-mRNA transcript level","type":"exact"},{"name":"increased mitochondrial re-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level in mitochondrion","type":"exact"}],"termid":"FYPO:0006446"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0042010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 66","termid":"PBO:0042010"}


id: PBO:0068055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 360","termid":"PBO:0068055"}


id: GO:0019024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of single stranded RNA of either positive or negative sense.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete ssRNA viral genome (obsolete GO:0019024)","termid":"GO:0019024"}


id: PBO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spherical_vegetative_cell","termid":"PBO:0030789"}


id: PR:Q8TFF9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fah1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase PB8B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.03","synonyms":[{"name":"Spom972h-fah1","type":"exact"}],"termid":"PR:Q8TFF9"}


id: GO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation (obsolete GO:0000733)","termid":"GO:0000733"}


id: GO:1904875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF_telomere","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:17389648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA ligation","termid":"GO:0051105"},{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA ligase activity","termid":"GO:1904875"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: GO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoteichoic acid.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoteichoic acid binding","termid":"GO:0070891"}


id: PBO:0071353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 12","termid":"PBO:0071353"}


id: GO:0050321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein.","definition_xrefs":["EC:2.7.11.26","MetaCyc:TAU-PROTEIN-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"tau-protein kinase activity","synonyms":[{"name":"cdk5/p20","type":"related"},{"name":"ATP:tau-protein O-phosphotransferase activity","type":"broad"},{"name":"CDK5/p23","type":"related"},{"name":"GSK","type":"related"},{"name":"STK31","type":"related"},{"name":"TPK","type":"related"},{"name":"TPK I","type":"related"},{"name":"TPK II","type":"related"},{"name":"TTK","type":"related"},{"name":"[Tau protein] kinase activity","type":"exact"},{"name":"brain protein kinase PK40erk activity","type":"narrow"},{"name":"glycogen synthase kinase-3beta activity","type":"related"},{"name":"protein tau kinase activity","type":"related"},{"name":"tau kinase activity","type":"related"},{"name":"tau protein kinase activity","type":"related"},{"name":"tau-protein kinase I activity","type":"narrow"},{"name":"tau-protein kinase II activity","type":"narrow"},{"name":"tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:0050321"}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: PBO:0083009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain-containing phospholipase A1; mitochondrial matrix enzyme with sn-1-specific activity, hydrolyzing cardiolipin, PE, PC, PG and PA; implicated in remodeling of mitochondrial phospholipids; antagonistically regulated by Aft1p and Aft2p; in humans, mutations in DDHD1 and DDHD2 genes cause specific types of hereditary spastic paraplegia, while DDL1-defective yeast share similar phenotypes such as mitochondrial dysfunction and defects in lipid metabolism","termid":"PBO:0083009"}


id: PBO:0027561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_DNA_double-strand_break_formation_at_silent_mating-type_cassette","termid":"PBO:0027561"}


id: PR:O14010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb6 gene.","definition_xrefs":["UniProtKB:O14010","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.07","synonyms":[{"name":"Spom972h-srb6","type":"exact"},{"name":"mediator complex subunit 22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14010"}


id: GO:1903368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of foraging behavior.","definition_xrefs":["GO_REF:0000058","PMID:8677262","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of foraging behavior","termid":"GO:1903368"}


id: PBO:0090027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic ring-opening dioxygenase","termid":"PBO:0090027"}


id: GO:0050383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uracil + acceptor = barbiturate + reduced acceptor.","definition_xrefs":["RHEA:22752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"uracil dehydrogenase activity","secondary_identifiers":["EC:1.17.99.4","MetaCyc:URACIL-DEHYDROGENASE-RXN"],"termid":"GO:0050383"}


id: PATO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000243 lordosis reflex (obsolete PATO:0000243)","termid":"PATO:0000243"}


id: PBO:0090365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope Ish domain protein Ish1","termid":"PBO:0090365"}


id: PBO:0058015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3941","termid":"PBO:0058015"}


id: PBO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methyl_methanesulfonate","termid":"PBO:0031341"}


id: PBO:0081709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF628 divergent transcript","termid":"PBO:0081709"}


id: SO:0001728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein may be dimethylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_dimethylation_site","synonyms":[{"name":"H3K9 di-methylation site","type":"exact"},{"name":"H3K9Me2","type":"related"}],"termid":"SO:0001728"}


id: PBO:0071254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 95","termid":"PBO:0071254"}


id: PBO:0086826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL165W is not an essential gene","termid":"PBO:0086826"}


id: GO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem I.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloroplast photosystem I binding","termid":"GO:0062067"}


id: GO:1901695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyramine.","definition_xrefs":["GOC:TermGenie","PMID:21284755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyramine biosynthetic process","synonyms":[{"name":"tyramine anabolism","type":"exact"},{"name":"tyramine biosynthesis","type":"exact"},{"name":"tyramine formation","type":"exact"},{"name":"tyramine synthesis","type":"exact"}],"termid":"GO:1901695"}


id: PBO:0083448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BUD31","termid":"PBO:0083448"}


id: PBO:0039163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6 pseudogene 2","termid":"PBO:0039163"}


id: GO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A branched pathway that produces the precursors to four structurally distinct types of polycyclic diterpenes. The pathway starts with the cyclization of geranylgeranyl diphosphate into ent-copalyl diphosphate and syn-copalyl diphosphate. The catalytic conversion by diterpene cyclases of these two compounds produces the four diterpene hydrocarbons which are precursors to the four structurally distinct classes of diterpene phytoalexins.","definition_xrefs":["MetaCyc:PWY-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"part_of","term_name":"diterpene phytoalexin biosynthetic process","termid":"GO:0051502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"diterpene phytoalexin precursor biosynthetic process pathway","synonyms":[{"name":"diterpene phytoalexin precursor anabolism pathway","type":"exact"},{"name":"diterpene phytoalexin precursor formation pathway","type":"exact"},{"name":"diterpene phytoalexin precursor synthesis pathway","type":"exact"}],"termid":"GO:0051504"}


id: GO:0097263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin D4 + H20 = eoxin E4 + glycine.","definition_xrefs":["GOC:mw","PMID:18184802","PMID:18647347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"eoxin E4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161868"],"termid":"GO:0097263"}


id: PBO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A","termid":"PBO:0072554"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_03724","SJAG_01119","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92290],"is_not":false,"summary":null,"term":"GO:0008534"},{"annotations":[91002,73274,92287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003907","EC:3.2.2.23","MetaCyc:3.2.2.23-RXN","Reactome:R-HSA-110229","Reactome:R-HSA-110243","Reactome:R-HSA-110244"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0008534":null,"GO:0034039":null}}


id: PBO:0030289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glycerol_carbon_source","termid":"PBO:0030289"}


id: PR:Q9P7G9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyl-sulfate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.11","secondary_identifiers":["UniProtKB:Q9P7G9"],"synonyms":[{"name":"APS kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP adenosine-5'-phosphosulfate 3'-phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysC","type":"exact"},{"name":"adenosine-5'-phosphosulfate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7G9"}


id: PBO:0050395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C","termid":"PBO:0050395"}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["PMID:12953054","PMID:29245123","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: PBO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A18","termid":"PBO:0047015"}


id: GO:1905880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis.","definition_xrefs":["GOC:TermGenie","PMID:26434723","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogenesis","synonyms":[{"name":"down regulation of oogenesis","type":"exact"},{"name":"down regulation of ovum development","type":"exact"},{"name":"down-regulation of oogenesis","type":"exact"},{"name":"down-regulation of ovum development","type":"exact"},{"name":"downregulation of oogenesis","type":"exact"},{"name":"downregulation of ovum development","type":"exact"},{"name":"inhibition of oogenesis","type":"narrow"},{"name":"inhibition of ovum development","type":"narrow"},{"name":"negative regulation of ovum development","type":"exact"}],"termid":"GO:1905880"}


id: GO:0140009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000069","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-aspartate import across plasma membrane","termid":"GO:0140009"}


id: PBO:0071032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 34","termid":"PBO:0071032"}


id: PBO:0073699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 1","termid":"PBO:0073699"}


id: MOD:01388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanol.","definition_xrefs":["PubMed:7328054","ChEBI:15675","RESID:AA0465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanol","synonyms":[{"name":"(2R)-1-aminopropan-2-ol","type":"exact"},{"name":"1-amino-2-hydroxypropane","type":"exact"},{"name":"1-amino-2-propanol","type":"exact"},{"name":"1-methyl-2-aminoethanol","type":"exact"},{"name":"2-amino-1-methylethanol","type":"exact"},{"name":"2-hydroxy-1-propylamine","type":"exact"},{"name":"2-hydroxypropanamine","type":"exact"},{"name":"2-hydroxypropylamine","type":"exact"},{"name":"MOD_RES Decarboxylated threonine","type":"exact"},{"name":"alpha-aminoisopropyl alcohol","type":"exact"},{"name":"dCbxThr","type":"exact"},{"name":"decarboxylated threonine","type":"exact"},{"name":"isopropanolamine","type":"exact"},{"name":"threamine","type":"exact"}],"termid":"MOD:01388"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87157],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0140101","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","GO:0001718","RHEA:24380","Reactome:R-HSA-5389841","GO:0070128"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: PBO:0081172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 2","termid":"PBO:0081172"}


id: GO:0050687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of antiviral mechanisms, thereby facilitating viral replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"},{"relation_name":"negatively_regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to virus","synonyms":[{"name":"down regulation of antiviral response","type":"exact"},{"name":"down-regulation of antiviral response","type":"exact"},{"name":"downregulation of antiviral response","type":"exact"},{"name":"inhibition of antiviral response","type":"narrow"},{"name":"negative regulation of antiviral response","type":"exact"}],"termid":"GO:0050687"}


id: GO:0046416
data:
  {"annotated_genes":["SJAG_03288","SJAG_02496","SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83603,110861],"is_not":false,"summary":null,"term":"GO:0046416"},{"annotations":[110859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[110860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[83796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[110862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_03288":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-amino acid metabolism","type":"exact"}],"termid":"GO:0046416","terms_by_termid":{"GO:0019478":null,"GO:0036088":null,"GO:0046416":null,"GO:0046436":null,"GO:1902114":null}}


id: PBO:0049675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase","termid":"PBO:0049675"}


id: PBO:0070918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 26","termid":"PBO:0070918"}


id: PBO:0053836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1101","termid":"PBO:0053836"}


id: PBO:0064150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2 pseudogene 1","termid":"PBO:0064150"}


id: PBO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase","termid":"PBO:0003314"}


id: PBO:0069444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 709, pseudogene","termid":"PBO:0069444"}


id: PBO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-C (predicted)","termid":"PBO:0003288"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: PBO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 1","termid":"PBO:0048174"}


id: PBO:0046582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 24","termid":"PBO:0046582"}


id: PBO:0029661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029661"}


id: SO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_nonamer","synonyms":[{"name":"J nonamer","type":"exact"},{"name":"J-NONAMER","type":"exact"}],"termid":"SO:0000514"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: GO:0000700
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of single bases present in mismatches by the cleavage the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000700","terms_by_termid":{"GO:0000701":null}}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: GO:0075182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont transcription in response to host (obsolete GO:0075182)","termid":"GO:0075182"}


id: GO:0009209
data:
  {"annotated_genes":["SJAG_00533","SJAG_03708","SJAG_02887","SJAG_00964","SJAG_00412","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[111028,89102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[89559,96194,102643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009209","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: GO:0051027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of RNA, deoxyribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transport","termid":"GO:0050657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"DNA transport","termid":"GO:0051027"}


id: GO:0097415
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion similar to a classical Lewy body but lacking a halo of protein fibrils.","definition_xrefs":["NIF_Subcellular:sao4040591221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cortical Lewy body","termid":"GO:0097415"}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: FYPO:0005889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium chloride. Cells stop growing (and may die) at a concentration of sodium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium chloride","synonyms":[{"name":"hypersensitive to sodium chloride","type":"exact"},{"name":"sensitive to NaCl","type":"exact"},{"name":"sensitive to sodium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0005889"}


id: GO:0036132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 15-keto-prostaglandin + NAD(P)H + H+ -> 13,14-dihydro-15-keto-prostaglandin + NAD(P)+. This reaction is the reduction of 15-keto-prostaglandin.","definition_xrefs":["KEGG_REACTION:R04557","GOC:mw","EC:1.3.1.48","PMID:17449869","KEGG_REACTION:R04556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"13-prostaglandin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161692"],"synonyms":[{"name":"15-ketoprostaglandin delta13-reductase activity","type":"related"},{"name":"15-oxo-delta13-prostaglandin reductase activity","type":"related"},{"name":"15-oxoprostaglandin 13-reductase activity","type":"exact"},{"name":"delta13-15-ketoprostaglandin reductase activity","type":"related"},{"name":"prostaglandin 13-reductase activity","type":"related"},{"name":"prostaglandin delta13-reductase activity","type":"related"}],"termid":"GO:0036132"}


id: PATO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (occurrent)","termid":"PATO:0001639"}


id: PBO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC163 homolog","termid":"PBO:0042093"}


id: FYPO:0002173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"increased meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"untimely expression of gametogenic genes during mitotic growth","type":"exact"}],"termid":"FYPO:0002173"}


id: PBO:0080710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 10B","termid":"PBO:0080710"}


id: GO:1900219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:17314325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"activation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"activation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900219"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0071268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 2","termid":"PBO:0071268"}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: PBO:0029981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029981"}


id: PBO:0081045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C4H2-type containing","termid":"PBO:0081045"}


id: GO:0120161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cold-induced thermogenesis","synonyms":[{"name":"regulation of CIT","type":"related"}],"termid":"GO:0120161"}


id: GO:0035654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-3 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. In some cases, the AP-3 complex is a heterotetrameric AP-type membrane coat adaptor complex that, in some organisms, links clathrin to the membrane surface of a vesicle.","definition_xrefs":["PMID:12802059","GOC:lb","PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-3-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-3-mediated","type":"exact"}],"termid":"GO:0035654"}


id: PBO:0055721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin B1","termid":"PBO:0055721"}


id: GO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fatty acid","termid":"GO:0070542"}


id: PBO:0081655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 580","termid":"PBO:0081655"}


id: PBO:0083495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2","termid":"PBO:0083495"}


id: PBO:0059697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 5","termid":"PBO:0059697"}


id: PBO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snoR02 (predicted)","termid":"PBO:0001648"}


id: MOD:00582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C,2x(15)N labeled L-lysine.","definition_xrefs":["OMSSA:181","PubMed:12716131","Unimod:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,2x(15)N labeled L-lysine","synonyms":[{"name":"13C(6) 15N(2) Silac label","type":"related"},{"name":"Label:13C(6)15N(2)","type":"related"},{"name":"lys-13C615N2","type":"exact"}],"termid":"MOD:00582"}


id: PBO:0053009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein family member 5","termid":"PBO:0053009"}


id: FYPO:0006061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal septin ring assembly during vegetative growth","synonyms":[{"name":"abnormal septin ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006061"}


id: GO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of new blood vessels as a result of the insertion and extension of lumenal tissue pillars.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intussusceptive angiogenesis","termid":"GO:0002041"}


id: PBO:0069198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 452, pseudogene","termid":"PBO:0069198"}


id: GO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100059)","termid":"GO:0100059"}


id: GO:0032434
data:
  {"annotated_genes":["SJAG_02485","SJAG_00071","SJAG_02723","SJAG_00052","SJAG_03699","SJAG_00475","SJAG_00642","SJAG_01210","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110742],"is_not":false,"summary":null,"term":"GO:0032434"},{"annotations":[98492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103076,86571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[113171,98513,102783,105026,107840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032434","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: PATO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castrated male","termid":"PATO:0002367"}


id: PBO:0083433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YIL060W","termid":"PBO:0083433"}


id: GO:1902230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:15314165","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902230"}


id: PBO:0046982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member F, pseudogene","termid":"PBO:0046982"}


id: PR:000027595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht3 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"hht3","type":"exact"}],"termid":"PR:000027595"}


id: PBO:0004837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized ubiquitin ligase Doa10 (predicted)","termid":"PBO:0004837"}


id: PBO:0069307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 563, pseudogene","termid":"PBO:0069307"}


id: PBO:0084009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogenin glucosyltransferase; self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin; GLG2 has a paralog, GLG1, that arose from the whole genome duplication","termid":"PBO:0084009"}


id: GO:0035594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ganglioside, a ceramide oligosaccharide carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid binding","termid":"GO:0043208"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ganglioside binding","termid":"GO:0035594"}


id: FYPO:0000821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of M-factor in growth medium","synonyms":[{"name":"decreased accumulation of M-factor in growth medium","type":"related"},{"name":"decreased level of M-factor in growth medium","type":"exact"},{"name":"decreased release of M-factor into growth medium","type":"related"},{"name":"reduced concentration of M-factor in growth medium","type":"exact"}],"termid":"FYPO:0000821"}


id: FYECO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in YES containing yeast extract and other components, but without glucose. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no glucose YES","termid":"FYECO:0000422"}


id: GO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP.","definition_xrefs":["EC:2.4.1.43","MetaCyc:2.4.1.43-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"polygalacturonate 4-alpha-galacturonosyltransferase activity","secondary_identifiers":["GO:0050375","RHEA:13573"],"synonyms":[{"name":"UDP galacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"},{"name":"UDP-D-galacturonate:1,4-alpha-poly-D-galacturonate 4-alpha-D-galacturonosyltransferase activity","type":"related"},{"name":"uridine diphosphogalacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"}],"termid":"GO:0047262"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: PBO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1","termid":"PBO:0090100"}


id: PBO:0042440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase gamma","termid":"PBO:0042440"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: PBO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylethanolamine acid amidase","termid":"PBO:0060418"}


id: PBO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase (predicted)","termid":"PBO:0001321"}


id: FYPO:0000788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000788"}


id: GO:0005787
data:
  {"annotated_genes":["SJAG_03261","SJAG_03737","SJAG_02867","SJAG_01750"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83845,94555,99948,108683],"is_not":false,"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum membrane and cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space.","definition_xrefs":["GOC:sgd_curators","PMID:1846444","PMID:7615509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01750":null,"SJAG_02867":null,"SJAG_03261":null,"SJAG_03737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0032991","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"signal peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005787","terms_by_termid":{"GO:0005787":null}}


id: PATO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being colored with a variegated pattern resembling marble,.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marbled","termid":"PATO:0002273"}


id: SOFP:unixdate
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unixdate","termid":"SOFP:unixdate"}


id: FYPO:0007842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is absent.","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"abolished NAT activity","type":"related"},{"name":"abolished protein N-terminal acetyltransferase activity","type":"exact"},{"name":"peptide alpha-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007842"}


id: GO:0071022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, U5, U12 and U6atac.","definition_xrefs":["ISBN:0879695897","GOC:mah","GOC:krc","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"post-spliceosomal complex","termid":"GO:0071020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U12-type post-spliceosomal complex","synonyms":[{"name":"AT-AC post-spliceosomal complex","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C2","type":"narrow"},{"name":"minor post-spliceosomal complex","type":"exact"},{"name":"yeast U12-type spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071022"}


id: PBO:0004043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a (predicted)","termid":"PBO:0004043"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: GO:0016895
data:
  {"annotated_genes":["SJAG_02298","SJAG_05373","SJAG_01832","SJAG_05280","SJAG_04410","SJAG_01163","SJAG_01648","SJAG_03734","SJAG_02818","SJAG_02908","SJAG_01173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105248,101350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[93268,89133,84588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[111790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[106090,84744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[93271,103895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[103487,84747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107715,93273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity","termid":"GO:0004529"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016796"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0004527","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"DNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008858","EC:3.1.11.-"],"synonyms":[{"name":"exodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exonuclease VIII activity","type":"narrow"}],"termid":"GO:0016895","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: GO:2000790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"}


id: PBO:0088596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Moc3","termid":"PBO:0088596"}


id: FYPO:0003617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin D. Cells stop growing (and may die) at a concentration of cytochalasin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cytochalasin D","synonyms":[{"name":"hypersensitive to cytochalasin D","type":"exact"},{"name":"sensitive to cytochalasin D during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin D during vegetative growth","type":"exact"}],"termid":"FYPO:0003617"}


id: GO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via synthesis-dependent strand annealing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via synthesis-dependent strand annealing","termid":"GO:0010791"}


id: SO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a U.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000917 insert_U (obsolete SO:0000917)","synonyms":[{"name":"insert U","type":"exact"}],"termid":"SO:0000917"}


id: GO:0035146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of specific branches of a tubular system to form a continuous network.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube fusion","termid":"GO:0035146"}


id: PBO:0041239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf100 pseudogene 1","termid":"PBO:0041239"}


id: GO:0030183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.","definition_xrefs":["GO_REF:0000022","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell differentiation","secondary_identifiers":["GO:0042115"],"synonyms":[{"name":"B cell development","type":"related"},{"name":"B lymphocyte differentiation","type":"exact"},{"name":"B-cell differentiation","type":"exact"},{"name":"B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0030183"}


id: PR:000050488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC20G8.05c","termid":"PR:000050488"}


id: PBO:0058020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3945 host gene","termid":"PBO:0058020"}


id: FYPO:0008086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is abolished .","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished nucleophagy during nitrogen starvation","termid":"FYPO:0008086"}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: PBO:0076571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3L","termid":"PBO:0076571"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: PR:O59836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsk1-interacting molecule 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.13","synonyms":[{"name":"DNA repair protein rad35 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dfp1","type":"exact"}],"termid":"PR:O59836"}


id: CHEBI:17326
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphate","termid":"CHEBI:17326"}


id: GO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["PMID:18234669","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan biosynthetic process","termid":"GO:0046354"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"beta-1,2-oligomannoside metabolic process","termid":"GO:0070135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"beta-1,2-oligomannoside biosynthetic process","synonyms":[{"name":"beta-1,2-oligomannoside anabolism","type":"exact"},{"name":"beta-1,2-oligomannoside biosynthesis","type":"exact"},{"name":"beta-1,2-oligomannoside formation","type":"exact"},{"name":"beta-1,2-oligomannoside synthesis","type":"exact"}],"termid":"GO:0070136"}


id: FYPO:0007667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to shmoo tip","synonyms":[{"name":"increased protein localisation to shmoo tip","type":"exact"},{"name":"increased protein localization to mating projection tip","type":"exact"}],"termid":"FYPO:0007667"}


id: GO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of formate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transmembrane transporter activity","termid":"GO:0015499"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"formate efflux transmembrane transporter activity","secondary_identifiers":["GO:0015509"],"synonyms":[{"name":"formate efflux permease activity","type":"related"}],"termid":"GO:0015660"}


id: GO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.","definition_xrefs":["GOC:mah","GOC:ds","ISBN:0943088399","PMID:9821949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem II","secondary_identifiers":["Wikipedia:Photosystem_II"],"termid":"GO:0009523"}


id: GO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a macrophage to one or more other cells to form a multinucleated cell.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage fusion","termid":"GO:0034238"}


id: GO:0106200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amino acids and peptides linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amio acids and peptides linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106200)","secondary_identifiers":["EC:7.4.2.-"],"termid":"GO:0106200"}


id: PBO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 2","termid":"PBO:0051721"}


id: SO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette_member","synonyms":[{"name":"gene cassette member","type":"exact"}],"termid":"SO:0005848"}


id: PBO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent microtubule severing protein (predicted)","termid":"PBO:0003296"}


id: PBO:0043408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 5","termid":"PBO:0043408"}


id: PBO:0052688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 12","termid":"PBO:0052688"}


id: PBO:0077048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 3","termid":"PBO:0077048"}


id: PBO:0064964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 17","termid":"PBO:0064964"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: FYPO:0005010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation at RxxS site during nitrogen starvation (obsolete FYPO:0005010)","synonyms":[{"name":"increased protein serine phosphorylation at Arg-X-X-Ser site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at PAS site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen depletion","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen deprivation","type":"exact"},{"name":"increased protein serine phosphorylation at arginine-X-X-serine site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at phospho-Akt site during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005010"}


id: CHEBI:38338
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopyrimidine","termid":"CHEBI:38338"}


id: GO:0106413
data:
  {"annotated_genes":["SJAG_00174","SJAG_03240","SJAG_01041","SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[105776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[100818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA-uracil + NAD(P)+ = RNA-dihydrouridine + NAD(P)H + H+.","definition_xrefs":["PMID:12581659","PMID:25073379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"RNA dihydrouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106413","terms_by_termid":{"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null}}


id: FYPO:0005321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested in mitotic metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic metaphase","termid":"FYPO:0000620"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase","termid":"FYPO:0003128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0000004","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic metaphase","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in metaphase during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in metaphase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in metaphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic metaphase arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest in metaphase","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic metaphase","type":"exact"},{"name":"mitotic cell cycle arrest in metaphase with elongated inviable mononucleate aseptate cell","type":"exact"},{"name":"mitotic metaphase arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"nuclear division arrest in metaphase without septation (elongated cell)","type":"exact"}],"termid":"FYPO:0005321"}


id: PR:P87048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03448","PANTHER:PTHR10943:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.03c","secondary_identifiers":["UniProtKB:P87048"],"synonyms":[{"name":"19S regulatory cap region of 26S protease subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSMD2","type":"exact"},{"name":"proteasome non-ATPase subunit mts4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87048"}


id: PBO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 5","termid":"PBO:0003016"}


id: GO:0004066
data:
  {"annotated_genes":["SJAG_04549","SJAG_02832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98291,106927],"is_not":false,"summary":null,"term":"GO:0004066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.","definition_xrefs":["RHEA:12228","EC:6.3.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"asparagine synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASNSYNB-RXN","Reactome:R-HSA-70599"],"synonyms":[{"name":"AS","type":"related"},{"name":"AS-B activity","type":"related"},{"name":"L-aspartate:L-glutamine amido-ligase (AMP-forming)","type":"related"},{"name":"asparagine synthase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolysing)","type":"related"},{"name":"asparagine synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"asparagine synthetase B activity","type":"related"},{"name":"glutamine-dependent asparagine synthetase activity","type":"related"}],"termid":"GO:0004066","terms_by_termid":{"GO:0004066":null}}


id: GO:1990054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temozolomide stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to temozolomide","termid":"GO:1990054"}


id: PR:A6X972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gon7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit gon7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.18","synonyms":[{"name":"Spom972h-gon7","type":"exact"}],"termid":"PR:A6X972"}


id: PR:G2TRM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.17","synonyms":[{"name":"Spom972h-SPAC4H3.17","type":"exact"}],"termid":"PR:G2TRM9"}


id: GO:0047111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferricytochrome C-553 + formate = ferrocytochrome C-553 + CO2.","definition_xrefs":["MetaCyc:1.2.2.3-RXN","EC:1.17.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome-c-553) activity","secondary_identifiers":["RHEA:15189"],"synonyms":[{"name":"formate dehydrogenase (cytochrome c-553)","type":"related"},{"name":"formate:ferricytochrome-c-553 oxidoreductase activity","type":"related"}],"termid":"GO:0047111"}


id: PBO:0089968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe  Mug98 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089968"}


id: CL:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.","definition_xrefs":["CARO:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell","termid":"CL:0000000"}


id: PBO:0078377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 1","termid":"PBO:0078377"}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: PATO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic","termid":"PATO:0002630"}


id: GO:0035219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the prothoracic disc over time, from its initial formation through to its metamorphosis to form the adult humerous and anterior spiracle.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc development","termid":"GO:0035219"}


id: PBO:0055635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3074","termid":"PBO:0055635"}


id: GO:1901248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"positively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung ciliated cell differentiation","synonyms":[{"name":"activation of lung ciliated cell differentiation","type":"narrow"},{"name":"up regulation of lung ciliated cell differentiation","type":"exact"},{"name":"up-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"upregulation of lung ciliated cell differentiation","type":"exact"}],"termid":"GO:1901248"}


id: PBO:0076465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAM41 mitochondrial translocator assembly and maintenance homolog","termid":"PBO:0076465"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: PBO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Kms1","termid":"PBO:0002063"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["InterPro:IPR011539","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: PBO:0059318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 1","termid":"PBO:0059318"}


id: GO:0106058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"positively_regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcineurin-mediated signaling","termid":"GO:0106058"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["MetaCyc:2-ENOATE-REDUCTASE-RXN","EC:1.3.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: FYPO:0004939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0000631","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during meiotic cell cycle","synonyms":[{"name":"protein phosphorylation abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004939"}


id: MOD:00568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 245 is redundant with Unimod 349. Remap to MOD:00776","definition_xrefs":["PubMed:9582379","PubMed:5764436","PubMed:8089117","Unimod:245","PubMed:1097438","PubMed:339692","PubMed:4399050","PubMed:6692818","PubMed:9521123"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00568 histidine oxidation to aspartic acid (obsolete MOD:00568)","termid":"MOD:00568"}


id: PBO:0079122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 13","termid":"PBO:0079122"}


id: PBO:0065205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRP38 domain containing A pseudogene 2","termid":"PBO:0065205"}


id: PBO:0066026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 9","termid":"PBO:0066026"}


id: PR:O59669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger HIT domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13093:SF0","OMA:SCHPO03105","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex subunit vps71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.05","secondary_identifiers":["UniProtKB:O59669"],"synonyms":[{"name":"Spom972h-ZNHIT1","type":"exact"}],"termid":"PR:O59669"}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03082","PANTHER:PTHR13326:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: PBO:0061755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyltransferase like, pseudogene","termid":"PBO:0061755"}


id: PBO:0074116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 2","termid":"PBO:0074116"}


id: PBO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis I","termid":"PBO:0007604"}


id: PBO:0087437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase); V-ATPase is an electrogenic proton pump found throughout the endomembrane system; V1 domain has eight subunits; required for the V1 domain to assemble onto the vacuolar membrane; protein abundance increases in response to DNA replication stress","termid":"PBO:0087437"}


id: SO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region's ability, when introduced to a mutant organism, to re-establish (rescue) a phenotype.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue","termid":"SO:0000814"}


id: PBO:0078823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-6","termid":"PBO:0078823"}


id: PBO:0048435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi brefeldin A resistant guanine nucleotide exchange factor 1","termid":"PBO:0048435"}


id: GO:1990693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi cis cisterna membrane (obsolete GO:1990693)","synonyms":[{"name":"intrinsic component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990693"}


id: GO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydration of mesaconyl-CoA to beta-methylmalyl-CoA.","definition_xrefs":["PMID:16856937","PMID:16856935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mesaconyl-CoA hydratase activity","synonyms":[{"name":"beta-methylmalyl-CoA dehydratase activity","type":"exact"},{"name":"mch","type":"related"},{"name":"mesaconyl-coenzyme A hydratase activity","type":"exact"}],"termid":"GO:0043881"}


id: GO:1990958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["PMID:21382270"],"gene_count":0,"genotype_count":0,"name":"obsolete response to thyrotropin-releasing hormone (obsolete GO:1990958)","synonyms":[{"name":"response to TRH","type":"related"}],"termid":"GO:1990958"}


id: PBO:0047911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(9)(p21)","termid":"PBO:0047911"}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30893609","PMID:24251537","PMID:30181274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: GO:1904278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wax biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24692420","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of wax biosynthetic process","termid":"GO:1904276"},{"relation_name":"positively_regulates","term_name":"wax biosynthetic process","termid":"GO:0010025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of wax biosynthetic process","synonyms":[{"name":"activation of wax anabolism","type":"narrow"},{"name":"activation of wax biosynthesis","type":"narrow"},{"name":"activation of wax biosynthetic process","type":"narrow"},{"name":"activation of wax formation","type":"narrow"},{"name":"activation of wax synthesis","type":"narrow"},{"name":"positive regulation of wax anabolism","type":"exact"},{"name":"positive regulation of wax biosynthesis","type":"exact"},{"name":"positive regulation of wax formation","type":"exact"},{"name":"positive regulation of wax synthesis","type":"exact"},{"name":"up regulation of wax anabolism","type":"exact"},{"name":"up regulation of wax biosynthesis","type":"exact"},{"name":"up regulation of wax biosynthetic process","type":"exact"},{"name":"up regulation of wax formation","type":"exact"},{"name":"up regulation of wax synthesis","type":"exact"},{"name":"up-regulation of wax anabolism","type":"exact"},{"name":"up-regulation of wax biosynthesis","type":"exact"},{"name":"up-regulation of wax biosynthetic process","type":"exact"},{"name":"up-regulation of wax formation","type":"exact"},{"name":"up-regulation of wax synthesis","type":"exact"},{"name":"upregulation of wax anabolism","type":"exact"},{"name":"upregulation of wax biosynthesis","type":"exact"},{"name":"upregulation of wax biosynthetic process","type":"exact"},{"name":"upregulation of wax formation","type":"exact"},{"name":"upregulation of wax synthesis","type":"exact"}],"termid":"GO:1904278"}


id: PBO:0049625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 28","termid":"PBO:0049625"}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_00669","SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90566,94072,96316],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:16452632","GOC:ab","RHEA:38583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: GO:0050291
data:
  {"annotated_genes":["SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88050,106206],"is_not":false,"summary":null,"term":"GO:0050291"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.","definition_xrefs":["MetaCyc:SPHINGOSINE-N-ACYLTRANSFERASE-RXN","PMID:12069845","EC:2.3.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"sphingosine N-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428185","RHEA:23768"],"synonyms":[{"name":"acyl-CoA:sphingosine N-acyltransferase activity","type":"related"},{"name":"ceramide synthase activity","type":"exact"},{"name":"ceramide synthetase activity","type":"related"},{"name":"dihydroceramide synthase activity","type":"exact"},{"name":"sphingosine acyltransferase activity","type":"related"}],"termid":"GO:0050291","terms_by_termid":{"GO:0050291":null}}


id: PBO:0084513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved endoplasmic reticulum membrane complex; involved in efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; interacts with Gal80p; homologous to worm H17B01.4/EMC-1, fly CG2943, and human KIAA0090","termid":"PBO:0084513"}


id: GO:0033289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule located such that it threads through the conoid and projects through the polar ring.","definition_xrefs":["GOC:mah","PMID:11901169","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"intraconoid microtubule","termid":"GO:0033289"}


id: RO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","termid":"RO:0002011"}


id: PBO:0017922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter (predicted)","termid":"PBO:0017922"}


id: PBO:0088267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase Myr1","termid":"PBO:0088267"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: PBO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 1","termid":"PBO:0044321"}


id: GO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP biosynthetic process (obsolete GO:0030828)","synonyms":[{"name":"activation of cGMP biosynthetic process","type":"narrow"},{"name":"positive regulation of cGMP anabolism","type":"exact"},{"name":"positive regulation of cGMP biosynthesis","type":"exact"},{"name":"positive regulation of cGMP formation","type":"exact"},{"name":"positive regulation of cGMP synthesis","type":"exact"},{"name":"stimulation of cGMP biosynthetic process","type":"narrow"},{"name":"up regulation of cGMP biosynthetic process","type":"exact"},{"name":"up-regulation of cGMP biosynthetic process","type":"exact"},{"name":"upregulation of cGMP biosynthetic process","type":"exact"}],"termid":"GO:0030828"}


id: PBO:0041127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 8","termid":"PBO:0041127"}


id: GO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a B cell that is mature, having left the bone marrow.","definition_xrefs":["CL:0000785","ISBN:0781735149","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"part_of","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell apoptotic process","synonyms":[{"name":"apoptosis of mature B cells","type":"exact"},{"name":"apoptosis of mature B lymphocytes","type":"exact"},{"name":"apoptosis of mature B-cells","type":"exact"},{"name":"apoptosis of mature B-lymphocytes","type":"exact"},{"name":"mature B cell apoptosis","type":"narrow"},{"name":"mature B cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B lymphocyte apoptosis","type":"exact"},{"name":"mature B lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"mature B-cell apoptosis","type":"exact"},{"name":"mature B-cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B-lymphocyte apoptosis","type":"exact"},{"name":"mature B-lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of mature B cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death, mature B cells","type":"exact"},{"name":"programmed cell death, mature B lymphocytes","type":"exact"},{"name":"programmed cell death, mature B-cells","type":"exact"},{"name":"programmed cell death, mature B-lymphocytes","type":"exact"}],"termid":"GO:0002901"}


id: GO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002593"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"negative regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002599"}


id: GO:1990420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The septation initiation signaling process by which the activity of the septation initiation network (SIN) is activated asymmetrically on the spindle pole bodies.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"establishment of septation initiation network asymmetry","synonyms":[{"name":"establishment of SIN asymmetry","type":"exact"}],"termid":"GO:1990420"}


id: FYPO:0005674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is higher than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of ubiquitinated protein in cell during vegetative growth","termid":"FYPO:0002774"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0005333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005674"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: PBO:0005810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs4","termid":"PBO:0005810"}


id: PBO:0026773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core","termid":"PBO:0026773"}


id: PBO:0041413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 31","termid":"PBO:0041413"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: GO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell differentiation","termid":"GO:0002067"}


id: PBO:0072837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein","termid":"PBO:0072837"}


id: PBO:0010136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX dehydratase (predicted)","termid":"PBO:0010136"}


id: GO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mammary gland mesenchymal cell. Mammary gland mesenchymal cells form a loosely connected network of cells that surround the mammary ducts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in mammary gland development","synonyms":[{"name":"mammary gland mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0060610"}


id: PBO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 31","termid":"PBO:0060011"}


id: PBO:0082181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC kinase; phosphorylated by cAMP-dependent protein kinase (PKA) in a TORC1-dependent manner; directly phosphorylated by TORC1; phosphorylates ribosomal protein Rps6a/b (S6), in a TORC-dependent manner; undergoes autophosphorylation","termid":"PBO:0082181"}


id: GO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"regulation of insulin secretion in response to glucose","type":"exact"}],"termid":"GO:0061178"}


id: PBO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 1","termid":"PBO:0060519"}


id: GO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:mtg_sensu","GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0003056"}


id: GO:0010799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"}


id: PBO:0047715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 6, pseudogene","termid":"PBO:0047715"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: GO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet alpha granule.","definition_xrefs":["GOC:mah","PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"platelet alpha granule membrane","synonyms":[{"name":"platelet alpha-granule membrane","type":"exact"}],"termid":"GO:0031092"}


id: GO:0009682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.","definition_xrefs":["PMID:15233292","PMID:10234273","PMID:23386685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance","termid":"GO:0009682"}


id: PBO:0049102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR158 antisense RNA 1","termid":"PBO:0049102"}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: PBO:0034234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_end_sequence_of","termid":"PBO:0034234"}


id: GO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the biotin carboxyl carrier protein, a subunit of acetyl-coenzyme A carboxylase.","definition_xrefs":["PMID:8102363","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biotin carboxyl carrier protein biosynthetic process","synonyms":[{"name":"BCCP biosynthesis","type":"exact"},{"name":"BCCP biosynthetic process","type":"exact"},{"name":"biotin carboxyl carrier protein anabolism","type":"exact"},{"name":"biotin carboxyl carrier protein biosynthesis","type":"exact"},{"name":"biotin carboxyl carrier protein formation","type":"exact"},{"name":"biotin carboxyl carrier protein synthesis","type":"exact"}],"termid":"GO:0042966"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: GO:0048629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of trichomes on the surface and margin of a leaf. Process involves signaling between adjacent epidermal cells that results in differentiation of some epidermal cells into trichomes.","definition_xrefs":["PMID:10368181","ISBN:0865427429","GOC:jid","GOC:sm","GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trichome patterning","synonyms":[{"name":"trichome distribution","type":"broad"},{"name":"trichome pattern biosynthesis","type":"exact"},{"name":"trichome pattern formation","type":"exact"},{"name":"trichome pattern specification","type":"related"},{"name":"trichome spacing","type":"exact"}],"termid":"GO:0048629"}


id: PBO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S rRNA","termid":"PBO:0000157"}


id: PBO:0047906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q24.1)","termid":"PBO:0047906"}


id: GO:0000922
data:
  {"annotated_genes":["SJAG_01546","SJAG_01464","SJAG_05196","SJAG_02624","SJAG_01805","SJAG_00918","SJAG_04745","SJAG_03915","SJAG_02320","SJAG_02241","SJAG_01224","SJAG_01613","SJAG_02761","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89930,87433,92901,96016,114897,95334,98938,103221,90897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090619"},{"annotations":[94751,103630,114205,95341],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990537"},{"annotations":[96499,114206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097431"},{"annotations":[95343,97548,90903],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005827"}]},"cv_name":"cellular_component","definition":"Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030615"],"termid":"GO:0000922","terms_by_termid":{"GO:0005827":null,"GO:0090619":null,"GO:0097431":null,"GO:1990537":null}}


id: GO:1990875
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the nucleoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005643","GO:0005575"],"is_obsolete":false,"name":"nucleoplasmic side of nuclear pore","synonyms":[{"name":"nucleoplasmic side of NPC","type":"exact"},{"name":"nucleoplasmic side of nuclear pore complex","type":"exact"},{"name":"nucleoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990875"}


id: PBO:0065196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 8","termid":"PBO:0065196"}


id: GO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive hypha growth (obsolete GO:0075063)","synonyms":[{"name":"positive regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"positive regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075063"}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: PR:O59759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.05 gene.","definition_xrefs":["UniProtKB:O59759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1020.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.05","synonyms":[{"name":"Spom972h-SPCC1020.05","type":"exact"}],"termid":"PR:O59759"}


id: GO:0032032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin I heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin I heavy chain binding","termid":"GO:0032037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"myosin I tail binding","termid":"GO:0032032"}


id: PR:Q09685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dre4 gene.","definition_xrefs":["UniProtKB:Q09685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor dre4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.02","synonyms":[{"name":"DNA replication protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dre4","type":"exact"},{"name":"hyphal growth protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09685"}


id: PBO:0062906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxytocin/neurophysin I prepropeptide","termid":"PBO:0062906"}


id: PBO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A3","termid":"PBO:0046418"}


id: PBO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex ubiquitin-protein ligase E3 subunit 4","termid":"PBO:0090392"}


id: GO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of an oxidizable substrate, for example, fructose.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to oxidizable substrate","synonyms":[{"name":"taxis in response to oxidizable substrate","type":"exact"}],"termid":"GO:0042333"}


id: GO:0032266
data:
  {"annotated_genes":["SJAG_04024","SJAG_01519","SJAG_00314","SJAG_04219","SJAG_01783","SJAG_01382","SJAG_02248","SJAG_02587","SJAG_01135","SJAG_04963","SJAG_04010","SJAG_00971","SJAG_00638","SJAG_00173","SJAG_00115","SJAG_03250","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86746,87649,92074,93748,94745,95825,95958,95959,96410,97841,100955,104789,105782,105929,106126,108587,111339],"is_not":false,"summary":null,"term":"GO:0032266"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.","definition_xrefs":["PMID:11557775","PMID:10209156","GOC:bf","PMID:11395417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00173":null,"SJAG_00314":null,"SJAG_00638":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01519":null,"SJAG_01783":null,"SJAG_02248":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04219":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-P binding","type":"exact"},{"name":"phosphatidylinositol 3-phosphate binding","type":"exact"}],"termid":"GO:0032266","terms_by_termid":{"GO:0032266":null}}


id: PBO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-5-1 (pseudogene)","termid":"PBO:0051249"}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dos","GOC:dph","GOC:tb","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: PBO:0047022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A25, pseudogene","termid":"PBO:0047022"}


id: GO:1990522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nematode tail spike is generated and organized. An example of this process is seen in C. elegans, where the tapered tail spike is formed during embryogenesis by a filamentous process that passes posteriorly through hyp10, the tail ventral hypodermis; the filamentous process is formed by a binucleate cell, the tail-spike cell, that subsequently undergoes programmed cell death.","definition_xrefs":["PMID:6684600","GOC:kmv","PMID:17329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tail spike morphogenesis","secondary_identifiers":["WBbt:0006979","WBbt:0008072"],"termid":"GO:1990522"}


id: PR:Q09948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc4 gene.","definition_xrefs":["UniProtKB:Q09948","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.15","synonyms":[{"name":"RSC complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc4","type":"exact"},{"name":"bromodomain-containing protein brd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09948"}


id: PBO:0081407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 254","termid":"PBO:0081407"}


id: PBO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination","termid":"PBO:0031728"}


id: PBO:0076072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor alpha","termid":"PBO:0076072"}


id: GO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"}


id: PBO:0028938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_growth_during_recovery_from_nitrogen_starvation","termid":"PBO:0028938"}


id: PBO:0083256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps verified gene RPL43A/YPR043W; deletion confers sensitivity to GSAO","termid":"PBO:0083256"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_00436","SJAG_01556","SJAG_02341","SJAG_00552","SJAG_03794","SJAG_00173","SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101113,114652],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[104136,105881,106465,105780,109752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: PBO:0028918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_glucose_starvation","termid":"PBO:0028918"}


id: PBO:0058898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12116","termid":"PBO:0058898"}


id: PBO:0051052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-15","termid":"PBO:0051052"}


id: GO:0098787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage involved in mRNA processing (obsolete GO:0098787)","termid":"GO:0098787"}


id: PBO:0040715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7A","termid":"PBO:0040715"}


id: GO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oligopeptide transport, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035950)","synonyms":[{"name":"regulation of oligopeptide transport by regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035950"}


id: PBO:0083414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0","termid":"PBO:0083414"}


id: PBO:0067714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 12","termid":"PBO:0067714"}


id: PBO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 38","termid":"PBO:0060091"}


id: GO:0110016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that positively regulates histone H3 acetylation, in particular H3K9, by recruiting histone acetyltransferases to rDNA gene regions. Located in the nucleolus where it assembles on RNA Polymerase I (Pol I) and possibly on RNA Polymerase III (Pol III) promoter and coding regions during early G1 phase and activates the post-initiation phases of Pol I transcription. May also activate RNA Polymerase II (Pol II) gene transcription. In mammals, B-WICH contains the WICH complex core of BAZ1B and SMARCA5, additional protein subunits and possibly rRNAs. Although it contains several catalytic subunits it is not clear which functions are carried out by the complex itself.","definition_xrefs":["PMID:16603771","PMID:23555303","PMID:21559432","PMID:26044184","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005730","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"B-WICH complex","termid":"GO:0110016"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: PBO:0083339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YBR141C; identified by gene-trapping, microarray analysis, and genome-wide homology searching","termid":"PBO:0083339"}


id: GO:1904205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["PMID:23470307","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle hypertrophy","synonyms":[{"name":"down regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"down-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"downregulation of skeletal muscle hypertrophy","type":"exact"},{"name":"inhibition of skeletal muscle hypertrophy","type":"narrow"}],"termid":"GO:1904205"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: FYPO:0009016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable when grown with xylose as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population viability","termid":"FYPO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population viability on xylose carbon source","synonyms":[{"name":"increased cell population viability during vegetative growth on xylose carbon source","type":"exact"}],"termid":"FYPO:0009016"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: PBO:0082953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic pre-60S factor; required for the correct recycling of shuttling factors Alb1, Arx1 and Tif6 at the end of the ribosomal large subunit biogenesis; involved in bud growth in the mitotic signaling network","termid":"PBO:0082953"}


id: PBO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 1","termid":"PBO:0072668"}


id: PBO:0073051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 9 (gene/pseudogene)","termid":"PBO:0073051"}


id: PBO:0029761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_elongated_vegetative_cell","termid":"PBO:0029761"}


id: PBO:0059531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Cys (UGU/C)","termid":"PBO:0059531"}


id: GO:0008535
data:
  {"annotated_genes":["SJAG_04154","SJAG_02480","SJAG_04348","SJAG_04116","SJAG_04553","SJAG_01140","SJAG_03873","SJAG_03046","SJAG_05199","SJAG_02975","SJAG_06046","SJAG_04603","SJAG_05398","SJAG_03296","SJAG_05302","SJAG_03337","SJAG_03399","SJAG_00449","SJAG_01996","SJAG_06392","SJAG_03322","SJAG_02979","SJAG_02229","SJAG_00852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98218,114415,103504,99893,88230,102988,113155,98687,85399,93497,90791,97825,111147,100146,85209,103300,113305,90806,98250,100391,87795,91777,85043,103615,110806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033617"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00852":null,"SJAG_01140":null,"SJAG_01996":null,"SJAG_02229":null,"SJAG_02480":null,"SJAG_02975":null,"SJAG_02979":null,"SJAG_03046":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03337":null,"SJAG_03399":null,"SJAG_03873":null,"SJAG_04116":null,"SJAG_04154":null,"SJAG_04348":null,"SJAG_04553":null,"SJAG_04603":null,"SJAG_05199":null,"SJAG_05302":null,"SJAG_05398":null,"SJAG_06046":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"respiratory chain complex IV assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c oxidase biogenesis","type":"broad"},{"name":"cytochrome c oxidase complex assembly","type":"exact"}],"termid":"GO:0008535","terms_by_termid":{"GO:0033617":null}}


id: PR:O74539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak3 gene.","definition_xrefs":["UniProtKB:O74539","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.06","synonyms":[{"name":"Spom972h-mak3","type":"exact"},{"name":"his-Asp phosphorelay kinase phk2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74539"}


id: PBO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_organization","termid":"PBO:0031039"}


id: GO:0140535
data:
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id: GO:0003040
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id: PBO:0001992
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id: PBO:0062998
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id: FYPO:0003893
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id: GO:0006059
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id: FYPO:0004858
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id: GO:1905613
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id: PBO:0078787
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id: GO:0003032
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id: FYPO:0007566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:11927555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic chromosome condensation","synonyms":[{"name":"advanced mitotic chromosome condensation","type":"exact"},{"name":"premature chromosome condensation during mitotic cell cycle","type":"related"},{"name":"premature mitotic chromosome condensation during vegetative growth","type":"exact"}],"termid":"FYPO:0007566"}


id: PBO:0049454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucoside xylosyltransferase 2","termid":"PBO:0049454"}


id: GO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.","definition_xrefs":["RESID:AA0059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein myristoylation","termid":"GO:0006499"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-myristoylation","synonyms":[{"name":"N-terminal peptidyl-glycine N-myristylation","type":"exact"}],"termid":"GO:0018008"}


