# genes

id: SJAG_00430
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96970],"is_not":false,"summary":null,"term":"GO:0006887"},{"annotations":[96971],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[96972],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[96973],"is_not":false,"summary":null,"term":"GO:0023052"},{"annotations":[96974],"is_not":false,"summary":null,"term":"GO:0006906"}],"cellular_component":[{"annotations":[96964],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96965],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[96966],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[96967],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[96968],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[96969],"is_not":false,"summary":null,"term":"GO:0005628"}],"molecular_function":[{"annotations":[96975],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[96976],"is_not":false,"summary":null,"term":"GO:0003924"}]},"dbxrefs":["GOA:B6JVL6","EnsemblGenomes-Tr:EEB05417","InterPro:IPR001806","UniProtKB/TrEMBL:B6JVL6","EnsemblGenomes-Gn:SJAG_00430","InterPro:IPR005225","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[[186,187]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"},{"name":"srp2","uniquename":"SJAG_00425"}],"genes_by_uniquename":{"HGNC:30273":null,"HGNC:7007":null,"HGNC:9759":null,"HGNC:9762":null,"SJAG_00430":null,"SPAC9E9.07c":null,"YFL005W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":200,"score":0.0,"start":2}],"model":"1ukvY00","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00071","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":171,"score":0.0,"start":11}],"model":"PF00071","name":"Ras family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00449","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":31,"score":0.0,"start":10},{"end":49,"score":0.0,"start":33},{"end":73,"score":0.0,"start":51},{"end":126,"score":0.0,"start":113},{"end":170,"score":0.0,"start":148}],"model":"PR00449","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51419","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":200,"score":0.0,"start":5}],"model":"PS51419","name":"small GTPase Rab1 family profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51420","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":171,"score":0.0,"start":3}],"model":"PS51420","name":"small GTPase Rho family profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51421","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":200,"score":0.0,"start":3}],"model":"PS51421","name":"small GTPase Ras family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47980","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":200,"score":0.0,"start":4}],"model":"PTHR47980:SF24","name":"LD44762P"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00173","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":173,"score":2.8000003225952403e-39,"start":11}],"model":"SM00173","name":"Ras subfamily of RAS small GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00174","interpro_id":"IPR001806","interpro_name":"Small GTPase","interpro_type":"Family","locations":[{"end":173,"score":3.40000007586095e-14,"start":12}],"model":"SM00174","name":"Rho (Ras homology) subfamily of Ras-like small GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00175","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":173,"score":0.0,"start":10}],"model":"SM00175","name":"Rab subfamily of small GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00176","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":198,"score":0.000037000001611886546,"start":15}],"model":"SM00176","name":"Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":178,"score":0.0,"start":5}],"model":"0044416","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00231","interpro_id":"IPR005225","interpro_name":"Small GTP-binding protein domain","interpro_type":"Domain","locations":[{"end":163,"score":1.8000000057079383e-28,"start":8}],"model":"TIGR00231","name":"small GTP-binding protein domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01867","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":173,"score":0.0,"start":7}],"model":"cd01867","name":"Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3355767,"start_pos":3354887,"strand":"reverse"},"name":"ypt2","ortholog_annotations":[{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30273","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7007","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9759","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9762","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00430","ortholog_taxonid":4932,"ortholog_uniquename":"YFL005W","reference_uniquename":"PMID:29761456"}],"product":"GTPase Ypt2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0003924","GO:0015630","GO:0023052","GO:0005628","GO:0031410","GO:0005634","GO:0005768","GO:0005886","GO:0005816","GO:0016192","GO:0061024","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003924":null,"GO:0005525":null,"GO:0005628":null,"GO:0005634":null,"GO:0005768":null,"GO:0005829":null,"GO:0005886":null,"GO:0006886":null,"GO:0006887":null,"GO:0006893":null,"GO:0006906":null,"GO:0023052":null,"GO:0035974":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00430.1"],"transcripts_by_uniquename":{"SJAG_00430.1":null},"uniprot_identifier":"B6JVL6","uniquename":"SJAG_00430"}


id: SJAG_00432
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96961],"is_not":false,"summary":null,"term":"GO:0009088"}],"cellular_component":[{"annotations":[96959],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96960],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[96962],"is_not":false,"summary":null,"term":"GO:0030170"},{"annotations":[96963],"is_not":false,"summary":null,"term":"GO:0004795"}]},"dbxrefs":["InterPro:IPR037158","EnsemblGenomes-Tr:EEB05418","InterPro:IPR004450","UniProtKB/TrEMBL:B6JVL7","InterPro:IPR001926","GOA:B6JVL7","InterPro:IPR029144","EnsemblGenomes-Gn:SJAG_00432","InterPro:IPR000634","InterPro:IPR036052"],"deletion_viability":"unknown","disordered_region_coords":[[2,5],[142,150],[429,432]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"},{"name":"bbl1","uniquename":"SJAG_00426"}],"genes_by_uniquename":{"HGNC:26160":null,"SJAG_00432":null,"SPAC9E9.06c":null,"YCR053W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1100","interpro_id":"IPR036052","interpro_name":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":480,"score":0.0,"start":103},{"end":490,"score":0.0,"start":113}],"model":"1kl7A02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1380.10","interpro_id":"IPR037158","interpro_name":"Threonine synthase, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":91,"score":1.0999999914511224e-27,"start":1}],"model":"4f4fA01","name":"Threonine synthase, N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00291","interpro_id":"IPR001926","interpro_name":"Tryptophan synthase beta chain-like, PALP domain","interpro_type":"Domain","locations":[{"end":445,"score":1.0999999780167719e-18,"start":94}],"model":"PF00291","name":"Pyridoxal-phosphate dependent enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14821","interpro_id":"IPR029144","interpro_name":"Threonine synthase, N-terminal","interpro_type":"Domain","locations":[{"end":85,"score":3.3999998904110398e-28,"start":6}],"model":"PF14821","name":"Threonine synthase N terminus"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00165","interpro_id":"IPR000634","interpro_name":"Serine/threonine dehydratase, pyridoxal-phosphate-binding site","interpro_type":"Binding_site","locations":[{"end":121,"score":0.0,"start":107}],"model":"PS00165","name":"Serine/threonine dehydratases pyridoxal-phosphate attachment site"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42690","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":514,"score":0.0,"start":6}],"model":"PTHR42690:SF1","name":"THREONINE SYNTHASE FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53686","interpro_id":"IPR036052","interpro_name":"Tryptophan synthase beta chain-like, PALP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":506,"score":0.0,"start":5}],"model":"0040135","name":"Tryptophan synthase beta subunit-like PLP-dependent enzymes"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00260","interpro_id":"IPR004450","interpro_name":"Threonine synthase-like","interpro_type":"Family","locations":[{"end":470,"score":0.0,"start":72}],"model":"TIGR00260","name":"threonine synthase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01560","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":504,"score":0.0,"start":6}],"model":"cd01560","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3354047,"start_pos":3352416,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00432","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26160","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00432","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00432","ortholog_taxonid":4932,"ortholog_uniquename":"YCR053W","reference_uniquename":"PMID:29761456"}],"product":"threonine synthase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016829","GO:0005634","GO:0005829","GO:0006520"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004795":null,"GO:0005634":null,"GO:0005829":null,"GO:0009088":null,"GO:0030170":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00432.1"],"transcripts_by_uniquename":{"SJAG_00432.1":null},"uniprot_identifier":"B6JVL7","uniquename":"SJAG_00432"}


id: SJAG_00433
data:
  {"coiled_coil_coords":[[247,267]],"cv_annotations":{"cellular_component":[{"annotations":[96958],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVL8","EnsemblGenomes-Gn:SJAG_00433","EnsemblGenomes-Tr:EEB05419"],"deletion_viability":"unknown","disordered_region_coords":[[104,106],[228,246],[268,271],[1,48],[62,61],[77,78],[115,173],[187,186],[191,190],[215,214],[219,218]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"},{"name":"ptk1","uniquename":"SJAG_00427"}],"genes_by_uniquename":{"HGNC:14626":null,"SJAG_00433":null,"SPAC9E9.05":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3352161,"start_pos":3351346,"strand":"forward"},"low_complexity_region_coords":[[49,61],[62,76],[79,103],[174,186],[187,190],[191,214],[215,218],[219,227]],"name":"sor1","ortholog_annotations":[{"gene_uniquename":"SJAG_00433","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14626","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00433","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9E9.05","reference_uniquename":"PMID:21511999"}],"product":"sororin, WAPL antagonist Sor1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00433.1"],"transcripts_by_uniquename":{"SJAG_00433.1":null},"uniprot_identifier":"B6JVL8","uniquename":"SJAG_00433"}


id: SJAG_00434
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101099],"is_not":false,"summary":null,"term":"GO:1990569"},{"annotations":[65676,101100],"is_not":false,"summary":null,"term":"GO:0015790"}],"cellular_component":[{"annotations":[101095],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[101096],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[101097],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[101098],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[101101],"is_not":false,"summary":null,"term":"GO:0005462"},{"annotations":[101102],"is_not":false,"summary":null,"term":"GO:0005464"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00434","InterPro:IPR013657","EnsemblGenomes-Tr:EEB05420","GOA:B6JVL9","UniProtKB/TrEMBL:B6JVL9"],"deletion_viability":"unknown","disordered_region_coords":[[312,316]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"},{"name":"nca2","uniquename":"SJAG_00428"}],"genes_by_uniquename":{"HGNC:20584":null,"SJAG_00434":null,"SPBC1734.09":null,"YEL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08449","interpro_id":"IPR013657","interpro_name":"SLC35B1-4/HUT1","interpro_type":"Family","locations":[{"end":304,"score":0.0,"start":2}],"model":"PF08449","name":"UAA transporter family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10778","interpro_id":"IPR013657","interpro_name":"SLC35B1-4/HUT1","interpro_type":"Family","locations":[{"end":303,"score":0.0,"start":2}],"model":"PTHR10778:SF4","name":"SOLUTE CARRIER FAMILY 35 MEMBER B"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103481","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":139,"score":1.1800000265793642e-6,"start":60}],"model":"0043518","name":"Multidrug resistance efflux transporter EmrE"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00803","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":301,"score":1.4000000103724471e-16,"start":88}],"model":"TIGR00803","name":"UDP-galactose transporter (Provisional)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3350937,"start_pos":3349987,"strand":"reverse"},"low_complexity_region_coords":[[68,83]],"name":"yea4","ortholog_annotations":[{"gene_uniquename":"SJAG_00434","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20584","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00434","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00434","ortholog_taxonid":4932,"ortholog_uniquename":"YEL004W","reference_uniquename":"PMID:29761456"}],"product":"ER UDP-N-acetylglucosamine transmembrane transporter","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055085","GO:0022857","GO:0005789","GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005462":null,"GO:0005464":null,"GO:0005783":null,"GO:0005789":null,"GO:0015790":null,"GO:0051286":null,"GO:1990569":null},"tm_domain_coords":[[30,52],[65,87],[92,114],[121,138],[153,175],[188,205],[225,244],[257,279],[283,305]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00434.1"],"transcripts_by_uniquename":{"SJAG_00434.1":null},"uniprot_identifier":"B6JVL9","uniquename":"SJAG_00434"}


id: SJAG_00435
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101106],"is_not":false,"summary":null,"term":"GO:0180010"},{"annotations":[101107],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[101103],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101104],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101105],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[73205],"is_not":false,"summary":null,"term":"GO:0030332"},{"annotations":[73204],"is_not":false,"summary":null,"term":"GO:0031624"},{"annotations":[101108],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05421","EnsemblGenomes-Gn:SJAG_00435","InterPro:IPR019193","UniProtKB/TrEMBL:B6JVM0"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"},{"name":"rad26","uniquename":"SJAG_00429"}],"genes_by_uniquename":{"HGNC:21381":null,"SJAG_00435":null,"SPBC1734.10c":null,"YJR141W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09814","interpro_id":"IPR019193","interpro_name":"Ubiquitin-conjugating enzyme E2-binding protein","interpro_type":"Family","locations":[{"end":328,"score":2.4000000076105844e-29,"start":30}],"model":"PF09814","name":"HECT-like Ubiquitin-conjugating enzyme (E2)-binding"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31531","interpro_id":"IPR019193","interpro_name":"Ubiquitin-conjugating enzyme E2-binding protein","interpro_type":"Family","locations":[{"end":330,"score":1.7000000053908306e-29,"start":51}],"model":"PTHR31531:SF2","name":"E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.1","end_pos":3349954,"start_pos":3348624,"strand":"forward"},"name":"ipa1","ortholog_annotations":[{"gene_uniquename":"SJAG_00435","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21381","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00435","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00435","ortholog_taxonid":4932,"ortholog_uniquename":"YJR141W","reference_uniquename":"PMID:29761456"}],"product":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0019787","GO:0016071","GO:0030163","GO:0016746","GO:0005829","GO:0140096","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005634":null,"GO:0005829":null,"GO:0030332":null,"GO:0031624":null,"GO:0043161":null,"GO:0061630":null,"GO:0180010":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00435.1"],"transcripts_by_uniquename":{"SJAG_00435.1":null},"uniprot_identifier":"B6JVM0","uniquename":"SJAG_00435"}


id: SJAG_00436
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101112],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[101113],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[101114],"is_not":false,"summary":null,"term":"GO:0140454"},{"annotations":[101115],"is_not":false,"summary":null,"term":"GO:0042026"}],"cellular_component":[{"annotations":[101109],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101110],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101111],"is_not":false,"summary":null,"term":"GO:0140453"}],"molecular_function":[{"annotations":[101116],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[58317],"is_not":false,"summary":null,"term":"GO:0030544"},{"annotations":[101117],"is_not":false,"summary":null,"term":"GO:0140311"},{"annotations":[58319],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["InterPro:IPR002939","GOA:B6JVM1","InterPro:IPR001305","InterPro:IPR008971","UniProtKB/TrEMBL:B6JVM1","EnsemblGenomes-Tr:EEB05422","InterPro:IPR018253","EnsemblGenomes-Gn:SJAG_00436","InterPro:IPR012724","InterPro:IPR036410","InterPro:IPR036869","InterPro:IPR001623"],"deletion_viability":"unknown","disordered_region_coords":[[66,67],[74,75],[102,104],[108,109],[223,225],[308,309],[345,348],[352,354],[358,365],[370,404]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"},{"name":"ypt2","uniquename":"SJAG_00430"}],"genes_by_uniquename":{"HGNC:14884":null,"HGNC:14885":null,"HGNC:5229":null,"SJAG_00436":null,"SPBC1734.11":null,"YNL064C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.110","interpro_id":"IPR036869","interpro_name":"Chaperone J-domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":102,"score":2.000000047484456e-32,"start":3}],"model":"4j7zF00","name":"DnaJ domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.10.230.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":202,"score":0.0,"start":137}],"model":"1nltA02","name":"Heat shock protein DnaJ, cysteine-rich domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.260.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":243,"score":0.0,"start":107},{"end":331,"score":5.599999872774024e-23,"start":252}],"model":"1nltA01","name":"Urease metallochaperone UreE, N-terminal domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_01152","interpro_id":"IPR012724","interpro_name":"Chaperone DnaJ","interpro_type":"Family","locations":[{"end":371,"score":0.0,"start":3}],"model":"MF_01152","name":"Chaperone protein DnaJ [dnaJ]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00226","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":65,"score":2.799999906804728e-25,"start":7}],"model":"PF00226","name":"DnaJ domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00684","interpro_id":"IPR001305","interpro_name":"Heat shock protein DnaJ, cysteine-rich domain","interpro_type":"Domain","locations":[{"end":202,"score":2.9000000422834673e-15,"start":137}],"model":"PF00684","name":"DnaJ central domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01556","interpro_id":"IPR002939","interpro_name":"Chaperone DnaJ, C-terminal","interpro_type":"Domain","locations":[{"end":330,"score":5.899999028223923e-40,"start":112}],"model":"PF01556","name":"DnaJ C terminal domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00625","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":26,"score":5.3699999911445694e-20,"start":8},{"end":41,"score":5.3699999911445694e-20,"start":26},{"end":79,"score":5.3699999911445694e-20,"start":60}],"model":"PR00625","name":"DnaJ domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00636","interpro_id":"IPR018253","interpro_name":"DnaJ domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":64,"score":0.0,"start":45}],"model":"PS00636","name":"Nt-dnaJ domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50076","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":68,"score":0.0,"start":6}],"model":"PS50076","name":"dnaJ domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51188","interpro_id":"IPR001305","interpro_name":"Heat shock protein DnaJ, cysteine-rich domain","interpro_type":"Domain","locations":[{"end":207,"score":0.0,"start":124}],"model":"PS51188","name":"Zinc finger CR-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43888","interpro_id":"IPR044713","interpro_name":"DnaJ homolog subfamily A member 1/2-like","interpro_type":"Family","locations":[{"end":367,"score":0.0,"start":4}],"model":"PTHR43888:SF10","name":"DNAJ-LIKE-2, ISOFORM A-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00271","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":60,"score":6.399999869831615e-30,"start":5}],"model":"SM00271","name":"DnaJ molecular chaperone homology domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46565","interpro_id":"IPR036869","interpro_name":"Chaperone J-domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":99,"score":4.320000054811967e-34,"start":2}],"model":"0046983","name":"Chaperone J-domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49493","interpro_id":"IPR008971","interpro_name":"HSP40/DnaJ peptide-binding","interpro_type":"Homologous_superfamily","locations":[{"end":251,"score":2.749999996740718e-18,"start":109},{"end":332,"score":5.229999969738002e-18,"start":252}],"model":"0035833","name":"HSP40/DnaJ peptide-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57938","interpro_id":"IPR036410","interpro_name":"Heat shock protein DnaJ, cysteine-rich domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":204,"score":3.659999948475298e-19,"start":134}],"model":"0041451","name":"DnaJ/Hsp40 cysteine-rich domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06257","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":57,"score":1.3819099676871588e-23,"start":8}],"model":"cd06257","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd10719","interpro_id":"IPR001305","interpro_name":"Heat shock protein DnaJ, cysteine-rich domain","interpro_type":"Domain","locations":[{"end":202,"score":1.9845099269049977e-23,"start":137}],"model":"cd10719","name":"Zinc finger domain of DnaJ and HSP40"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd10747","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":331,"score":0.0,"start":108}],"model":"cd10747","name":"C-terminal substrate binding domain of DnaJ and HSP40"}],"location":{"chromosome_name":"supercont5.1","end_pos":3347652,"start_pos":3346438,"strand":"reverse"},"low_complexity_region_coords":[[22,33],[68,80],[90,107]],"name":"mas5","ortholog_annotations":[{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14884","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14885","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5229","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00436","ortholog_taxonid":4932,"ortholog_uniquename":"YNL064C","reference_uniquename":"PMID:29761456"}],"product":"Hsp40 family DNAJ domain protein Mas5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0140313","GO:0030163","GO:0051082","GO:0005829","GO:0140311","GO:0051604","GO:0006457"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0030544":null,"GO:0034605":null,"GO:0042026":null,"GO:0051082":null,"GO:0140311":null,"GO:0140453":null,"GO:0140454":null,"GO:0140455":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00436.1"],"transcripts_by_uniquename":{"SJAG_00436.1":null},"uniprot_identifier":"B6JVM1","uniquename":"SJAG_00436"}


id: SJAG_00437
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101120],"is_not":false,"summary":null,"term":"GO:0006488"}],"cellular_component":[{"annotations":[101118],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[101119],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[101121],"is_not":false,"summary":null,"term":"GO:0052917"}]},"dbxrefs":["GOA:B6JVM2","EnsemblGenomes-Gn:SJAG_00437","InterPro:IPR005599","InterPro:IPR021719","InterPro:IPR039485","UniProtKB/TrEMBL:B6JVM2","EnsemblGenomes-Tr:EEB05423"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"},{"uniquename":"SJAG_00432"}],"genes_by_uniquename":{"HGNC:19358":null,"SJAG_00437":null,"SPBC1734.12c":null,"YNR030W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.10.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":532,"score":1.3999999770586413e-10,"start":471}],"model":"3w0eA00","name":"Trypsin Inhibitor V, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03901","interpro_id":"IPR005599","interpro_name":"GPI mannosyltransferase","interpro_type":"Family","locations":[{"end":375,"score":5.399999817402274e-37,"start":8}],"model":"PF03901","name":"Alg9-like mannosyltransferase family"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11720","interpro_id":"IPR021719","interpro_name":"Proteinase inhibitor I78","interpro_type":"Family","locations":[{"end":532,"score":0.000014000000192027073,"start":501}],"model":"PF11720","name":"Peptidase inhibitor I78 family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22760","interpro_id":"IPR005599","interpro_name":"GPI mannosyltransferase","interpro_type":"Family","locations":[{"end":416,"score":0.0,"start":6}],"model":"PTHR22760:SF1","name":"GLYCOSYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3345833,"start_pos":3344139,"strand":"forward"},"low_complexity_region_coords":[[155,166]],"name":"alg12","ortholog_annotations":[{"gene_uniquename":"SJAG_00437","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19358","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00437","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00437","ortholog_taxonid":4932,"ortholog_uniquename":"YNR030W","reference_uniquename":"PMID:29761456"}],"product":"dolichyl pyrophosphate Man7GlcNAc2 alpha-1,6-mannosyltransferase Alg12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005789","GO:0006629","GO:0005783","GO:0016757","GO:0006486"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005789":null,"GO:0006488":null,"GO:0052917":null},"tm_domain_coords":[[4,21],[59,81],[109,126],[131,153],[163,185],[192,214],[243,265],[270,287],[297,316],[332,354]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00437.1"],"transcripts_by_uniquename":{"SJAG_00437.1":null},"uniprot_identifier":"B6JVM2","uniquename":"SJAG_00437"}


id: SJAG_00438
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101124],"is_not":false,"summary":null,"term":"GO:0042776"},{"annotations":[101125],"is_not":false,"summary":null,"term":"GO:1902600"}],"cellular_component":[{"annotations":[101122],"is_not":false,"summary":null,"term":"GO:0005756"},{"annotations":[101123],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[101126],"is_not":false,"summary":null,"term":"GO:0046933"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVM3","InterPro:IPR000131","GOA:B6JVM3","EnsemblGenomes-Gn:SJAG_00438","InterPro:IPR023632","InterPro:IPR035968","EnsemblGenomes-Tr:EEB05424"],"deletion_viability":"unknown","disordered_region_coords":[[142,150],[281,284],[286,287]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"},{"name":"sor1","uniquename":"SJAG_00433"}],"genes_by_uniquename":{"HGNC:833":null,"SJAG_00438":null,"SPBC1734.13":null,"YBR039W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.80","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":322,"score":0.0,"start":44}],"model":"5fl7G01","name":"ATP synthase, gamma subunit, helix hairpin domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.1380.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":284,"score":0.0,"start":66}],"model":"5fl7G02","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00231","interpro_id":"IPR000131","interpro_name":"ATP synthase, F1 complex, gamma subunit","interpro_type":"Family","locations":[{"end":325,"score":0.0,"start":42}],"model":"PF00231","name":"ATP synthase"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF039089","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":325,"score":0.0,"start":10}],"model":"PIRSF039089","name":"ATP synthase gamma chain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00126","interpro_id":"IPR000131","interpro_name":"ATP synthase, F1 complex, gamma subunit","interpro_type":"Family","locations":[{"end":121,"score":3.900000048478386e-27,"start":102},{"end":227,"score":3.900000048478386e-27,"start":210},{"end":291,"score":3.900000048478386e-27,"start":272},{"end":324,"score":3.900000048478386e-27,"start":303}],"model":"PR00126","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00153","interpro_id":"IPR023632","interpro_name":"ATP synthase, F1 complex, gamma subunit conserved site","interpro_type":"Conserved_site","locations":[{"end":324,"score":0.0,"start":311}],"model":"PS00153","name":"ATP synthase gamma subunit signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11693","interpro_id":"IPR000131","interpro_name":"ATP synthase, F1 complex, gamma subunit","interpro_type":"Family","locations":[{"end":325,"score":0.0,"start":30}],"model":"PTHR11693:SF22","name":"ATP SYNTHASE GAMMA CHAIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52943","interpro_id":"IPR035968","interpro_name":"ATP synthase, F1 complex, gamma subunit superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":325,"score":0.0,"start":41}],"model":"0036816","name":"ATP synthase (F1-ATPase), gamma subunit"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01146","interpro_id":"IPR000131","interpro_name":"ATP synthase, F1 complex, gamma subunit","interpro_type":"Family","locations":[{"end":325,"score":0.0,"start":41}],"model":"TIGR01146","name":"ATP synthase F1 subunit gamma"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12151","interpro_id":"IPR000131","interpro_name":"ATP synthase, F1 complex, gamma subunit","interpro_type":"Family","locations":[{"end":322,"score":0.0,"start":41}],"model":"cd12151","name":"mitochondrial ATP synthase gamma subunit"}],"location":{"chromosome_name":"supercont5.1","end_pos":3343375,"start_pos":3342323,"strand":"reverse"},"name":"atp3","ortholog_annotations":[{"gene_uniquename":"SJAG_00438","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:833","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00438","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00438","ortholog_taxonid":4932,"ortholog_uniquename":"YBR039W","reference_uniquename":"PMID:29761456"}],"product":"F1-FO ATP synthase gamma subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0055086","GO:0055085","GO:0016874","GO:0022857","GO:0006091"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005756":null,"GO:0042776":null,"GO:0046933":null,"GO:1902600":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00438.1"],"transcripts_by_uniquename":{"SJAG_00438.1":null},"uniprot_identifier":"B6JVM3","uniquename":"SJAG_00438"}


id: SJAG_00439
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101131],"is_not":false,"summary":null,"term":"GO:0007346"},{"annotations":[101132],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[101127],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[101128],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101129],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101130],"is_not":false,"summary":null,"term":"GO:0019005"}],"molecular_function":[{"annotations":[101133],"is_not":false,"summary":null,"term":"GO:0061575"},{"annotations":[73156],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[101134],"is_not":false,"summary":null,"term":"GO:0044877"},{"annotations":[73159],"is_not":false,"summary":null,"term":"GO:0043130"},{"annotations":[101135],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR000789","InterPro:IPR036858","UniProtKB/TrEMBL:B6JVM4","EnsemblGenomes-Tr:EEB05425","EnsemblGenomes-Gn:SJAG_00439","GOA:B6JVM4"],"deletion_viability":"unknown","disordered_region_coords":[[3,6]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"},{"name":"yea4","uniquename":"SJAG_00434"}],"genes_by_uniquename":{"HGNC:19083":null,"HGNC:2000":null,"SJAG_00439":null,"SPBC1734.14c":null,"YBR135W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.170.10","interpro_id":"IPR036858","interpro_name":"Cyclin-dependent kinase, regulatory subunit superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":111,"score":0.0,"start":1}],"model":"4lpaA00","name":"Cyclin-dependent kinase, regulatory subunit"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01111","interpro_id":"IPR000789","interpro_name":"Cyclin-dependent kinase, regulatory subunit","interpro_type":"Family","locations":[{"end":101,"score":9.19999992455491e-33,"start":25}],"model":"PF01111","name":"Cyclin-dependent kinase regulatory subunit"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00296","interpro_id":"IPR000789","interpro_name":"Cyclin-dependent kinase, regulatory subunit","interpro_type":"Family","locations":[{"end":38,"score":5.599999813609456e-25,"start":24},{"end":53,"score":5.599999813609456e-25,"start":39},{"end":84,"score":5.599999813609456e-25,"start":70},{"end":99,"score":5.599999813609456e-25,"start":85}],"model":"PR00296","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00944","interpro_id":"IPR000789","interpro_name":"Cyclin-dependent kinase, regulatory subunit","interpro_type":"Family","locations":[{"end":45,"score":0.0,"start":27}],"model":"PS00944","name":"Cyclin-dependent kinases regulatory subunits signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00945","interpro_id":"IPR000789","interpro_name":"Cyclin-dependent kinase, regulatory subunit","interpro_type":"Family","locations":[{"end":98,"score":0.0,"start":88}],"model":"PS00945","name":"Cyclin-dependent kinases regulatory subunits signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23415","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":107,"score":2.5000000784359874e-23,"start":22}],"model":"PTHR23415:SF48","name":"CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01084","interpro_id":"IPR000789","interpro_name":"Cyclin-dependent kinase, regulatory subunit","interpro_type":"Family","locations":[{"end":102,"score":0.0,"start":24}],"model":"SM01084","name":"Cyclin-dependent kinase regulatory subunit"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55637","interpro_id":"IPR036858","interpro_name":"Cyclin-dependent kinase, regulatory subunit superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":106,"score":8.547920632381384e-44,"start":7}],"model":"0042693","name":"Cell cycle regulatory proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3342039,"start_pos":3341525,"strand":"forward"},"name":"suc1","ortholog_annotations":[{"gene_uniquename":"SJAG_00439","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19083","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2000","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00439","ortholog_taxonid":4932,"ortholog_uniquename":"YBR135W","reference_uniquename":"PMID:29761456"}],"product":"cyclin-dependent protein kinase regulatory subunit Suc1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829","GO:0030234","GO:0098772","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000307":null,"GO:0005634":null,"GO:0005829":null,"GO:0007346":null,"GO:0008270":null,"GO:0019005":null,"GO:0023052":null,"GO:0042393":null,"GO:0043130":null,"GO:0044877":null,"GO:0061575":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00439.1"],"transcripts_by_uniquename":{"SJAG_00439.1":null},"uniprot_identifier":"B6JVM4","uniquename":"SJAG_00439"}


id: SJAG_00440
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101139],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[101136],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101137],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101138],"is_not":false,"summary":null,"term":"GO:0016586"}],"molecular_function":[{"annotations":[101140],"is_not":false,"summary":null,"term":"GO:0003682"}]},"dbxrefs":["InterPro:IPR037382","EnsemblGenomes-Gn:SJAG_00440","GOA:B6JVM5","InterPro:IPR027180","InterPro:IPR036427","UniProtKB/TrEMBL:B6JVM5","InterPro:IPR018359","EnsemblGenomes-Tr:EEB05426","InterPro:IPR001487"],"deletion_viability":"unknown","disordered_region_coords":[[270,276],[278,280],[283,286],[345,345],[478,481]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"},{"name":"ipa1","uniquename":"SJAG_00435"}],"genes_by_uniquename":{"HGNC:30064":null,"SJAG_00440":null,"SPBC1734.15":null,"YKR008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.920.10","interpro_id":"IPR036427","interpro_name":"Bromodomain-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":114,"score":8.300000014282876e-26,"start":6},{"end":235,"score":7.100000172977923e-30,"start":115}],"model":"3mqmA00","name":"Bromodomain-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00439","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":100,"score":3.09999990162312e-21,"start":22},{"end":217,"score":8.399999733430389e-20,"start":139}],"model":"PF00439","name":"Bromodomain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00503","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":59,"score":2.3000000515249752e-10,"start":43},{"end":195,"score":2.3000000515249752e-10,"start":177},{"end":214,"score":2.3000000515249752e-10,"start":195}],"model":"PR00503","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00633","interpro_id":"IPR018359","interpro_name":"Bromodomain, conserved site","interpro_type":"Conserved_site","locations":[{"end":206,"score":0.0,"start":149}],"model":"PS00633","name":"Bromodomain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50014","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":96,"score":0.0,"start":26},{"end":214,"score":0.0,"start":144}],"model":"PS50014","name":"Bromodomain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR16062","interpro_id":"IPR037382","interpro_name":"Remodelling complex subunit Rsc/polybromo","interpro_type":"Family","locations":[{"end":105,"score":0.0,"start":23}],"model":"PTHR16062:SF19","name":"SWI/SNF-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00297","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":118,"score":1.399999968193506e-23,"start":5},{"end":233,"score":1.0000000031710769e-30,"start":123}],"model":"SM00297","name":"bromo domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47370","interpro_id":"IPR036427","interpro_name":"Bromodomain-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":116,"score":3.400000131152283e-27,"start":22},{"end":233,"score":1.95999994603e-29,"start":123}],"model":"0046608","name":"Bromodomain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04369","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":113,"score":3.2803700296916975e-28,"start":12},{"end":228,"score":1.4257199562524485e-28,"start":126}],"model":"cd04369","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3341124,"start_pos":3339455,"strand":"reverse"},"low_complexity_region_coords":[[295,312],[334,344],[416,416],[427,436]],"name":"rsc4","ortholog_annotations":[{"gene_uniquename":"SJAG_00440","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30064","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00440","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00440","ortholog_taxonid":4932,"ortholog_uniquename":"YKR008W","reference_uniquename":"PMID:29761456"}],"product":"RSC complex bromodomain subunit Rsc4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006325","GO:0005634","GO:0005694","GO:0006351","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003682":null,"GO:0005634":null,"GO:0005829":null,"GO:0016586":null,"GO:0045815":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00440.1"],"transcripts_by_uniquename":{"SJAG_00440.1":null},"uniprot_identifier":"B6JVM5","uniquename":"SJAG_00440"}


id: SJAG_00441
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101145],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[101146],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[101147],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[101141],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101142],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101143],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[101144],"is_not":false,"summary":null,"term":"GO:0070210"}],"molecular_function":[{"annotations":[101148],"is_not":false,"summary":null,"term":"GO:0003714"}]},"dbxrefs":["InterPro:IPR031693","InterPro:IPR003822","InterPro:IPR039774","EnsemblGenomes-Gn:SJAG_00441","UniProtKB/TrEMBL:B6JVM6","GOA:B6JVM6","InterPro:IPR013194","EnsemblGenomes-Tr:EEB05427","InterPro:IPR036600"],"deletion_viability":"unknown","disordered_region_coords":[[1,95],[163,181],[202,205],[265,267],[269,270],[272,274],[303,306],[314,340],[740,743],[782,807],[758,769]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"},{"name":"mas5","uniquename":"SJAG_00436"}],"genes_by_uniquename":{"HGNC:19353":null,"HGNC:19354":null,"SJAG_00441":null,"SPBC1734.16c":null,"YOL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1160.11","interpro_id":"IPR036600","interpro_name":"Paired amphipathic helix superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":157,"score":9.299999856330653e-23,"start":95},{"end":297,"score":6.999999777858658e-21,"start":225},{"end":443,"score":2.399999914359796e-7,"start":373}],"model":"2rmrA01","name":"Paired amphipathic helix"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02671","interpro_id":"IPR003822","interpro_name":"Paired amphipathic helix","interpro_type":"Repeat","locations":[{"end":156,"score":4.600000037862295e-15,"start":112},{"end":293,"score":3.6999998334272255e-14,"start":250}],"model":"PF02671","name":"Paired amphipathic helix repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08295","interpro_id":"IPR013194","interpro_name":"Histone deacetylase interacting domain","interpro_type":"Domain","locations":[{"end":549,"score":3.0000001167615996e-17,"start":465}],"model":"PF08295","name":"Sin3 family co-repressor"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16879","interpro_id":"IPR031693","interpro_name":"Sin3, C-terminal","interpro_type":"Domain","locations":[{"end":1071,"score":2.500000068113003e-28,"start":852}],"model":"PF16879","name":"C-terminal domain of Sin3a protein"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51477","interpro_id":"IPR003822","interpro_name":"Paired amphipathic helix","interpro_type":"Repeat","locations":[{"end":159,"score":0.0,"start":89},{"end":296,"score":0.0,"start":226}],"model":"PS51477","name":"PAH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12346","interpro_id":"IPR039774","interpro_name":"Transcriptional regulatory protein Sin3-like","interpro_type":"Family","locations":[{"end":936,"score":0.0,"start":91}],"model":"PTHR12346:SF64","name":"SIN3B-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00761","interpro_id":"IPR013194","interpro_name":"Histone deacetylase interacting domain","interpro_type":"Domain","locations":[{"end":562,"score":3.4999999343199306e-8,"start":462}],"model":"SM00761","name":"Histone deacetylase (HDAC) interacting"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47762","interpro_id":"IPR036600","interpro_name":"Paired amphipathic helix superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":157,"score":1.199999961918627e-19,"start":87},{"end":295,"score":1.829999974237649e-19,"start":223},{"end":441,"score":0.00004320000152802095,"start":380}],"model":"0037889","name":"PAH2 domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3339361,"start_pos":3335871,"strand":"forward"},"low_complexity_region_coords":[[182,201],[206,226],[770,781],[914,925]],"name":"pst3","ortholog_annotations":[{"gene_uniquename":"SJAG_00441","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19353","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1734.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00441","ortholog_taxonid":4932,"ortholog_uniquename":"YOL004W","reference_uniquename":"PMID:29761456"}],"product":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase complex subunit Pst3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006355","GO:0006351","GO:0003712","GO:0005829","GO:0005634","GO:0005654","GO:0006325","GO:0005694","GO:0006281","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0003714":null,"GO:0005634":null,"GO:0005829":null,"GO:0006303":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00441.1"],"transcripts_by_uniquename":{"SJAG_00441.1":null},"uniprot_identifier":"B6JVM6","uniquename":"SJAG_00441"}


id: SJAG_00442
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100787],"is_not":false,"summary":null,"term":"GO:0006038"},{"annotations":[100788],"is_not":false,"summary":null,"term":"GO:0140278"}],"cellular_component":[{"annotations":[100784],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[100785],"is_not":false,"summary":null,"term":"GO:0071944"},{"annotations":[100786],"is_not":false,"summary":null,"term":"GO:0000935"}],"molecular_function":[{"annotations":[100789],"is_not":false,"summary":null,"term":"GO:0004100"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05428","GOA:B6JVM7","InterPro:IPR004835","InterPro:IPR013616","InterPro:IPR004834","EnsemblGenomes-Gn:SJAG_00442","UniProtKB/TrEMBL:B6JVM7"],"deletion_viability":"unknown","disordered_region_coords":[[1,51],[54,57],[71,72],[191,194]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"},{"name":"alg12","uniquename":"SJAG_00437"}],"genes_by_uniquename":{"SJAG_00442":null,"SPBC1709.01":null,"YBR038W":null,"YNL192W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01644","interpro_id":"IPR004834","interpro_name":"Fungal chitin synthase","interpro_type":"Family","locations":[{"end":385,"score":0.0,"start":227}],"model":"PF01644","name":"Chitin synthase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08407","interpro_id":"IPR013616","interpro_name":"Chitin synthase N-terminal","interpro_type":"Domain","locations":[{"end":224,"score":3.9000000781839296e-22,"start":154}],"model":"PF08407","name":"Chitin synthase N-terminal"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22914","interpro_id":"IPR004835","interpro_name":"Chitin synthase","interpro_type":"Family","locations":[{"end":881,"score":0.0,"start":149}],"model":"PTHR22914:SF38","name":"CHITIN SYNTHASE"}],"location":{"chromosome_name":"supercont5.1","end_pos":3335029,"start_pos":3332308,"strand":"reverse"},"name":"chs2","ortholog_annotations":[{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1709.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4932,"ortholog_uniquename":"YBR038W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00442","ortholog_taxonid":4932,"ortholog_uniquename":"YNL192W","reference_uniquename":"PMID:29761456"}],"product":"chitin synthase homolog Chs2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016757","GO:0071554","GO:0000281","GO:0000935"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000935":null,"GO:0004100":null,"GO:0006038":null,"GO:0032153":null,"GO:0071944":null,"GO:0140278":null},"tm_domain_coords":[[574,593],[606,628],[643,665],[678,700],[710,727],[822,839],[854,876]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00442.1"],"transcripts_by_uniquename":{"SJAG_00442.1":null},"uniprot_identifier":"B6JVM7","uniquename":"SJAG_00442"}


id: SJAG_00443
data:
  {"cv_annotations":{"biological_process":[{"annotations":[57085],"is_not":false,"summary":null,"term":"GO:0106074"},{"annotations":[100792],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[100793],"is_not":false,"summary":null,"term":"GO:0061475"}],"cellular_component":[{"annotations":[100790],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[100791],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[100794],"is_not":false,"summary":null,"term":"GO:0002161"},{"annotations":[100795],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[100796],"is_not":false,"summary":null,"term":"GO:0004832"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00443","InterPro:IPR009008","InterPro:IPR013155","InterPro:IPR002303","GOA:B6JVM8","EnsemblGenomes-Tr:EEB05429","InterPro:IPR033705","UniProtKB/TrEMBL:B6JVM8","InterPro:IPR009080","InterPro:IPR002300","InterPro:IPR014729","InterPro:IPR001412"],"deletion_viability":"unknown","disordered_region_coords":[[1,36],[74,85],[88,91],[393,394],[830,831]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"},{"name":"atp3","uniquename":"SJAG_00438"}],"genes_by_uniquename":{"HGNC:12651":null,"SJAG_00443":null,"SPBC1709.02c":null,"YGR094W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.730.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":920,"score":0.0,"start":678}],"model":"1gaxA02","name":"Isoleucyl-tRNA Synthetase; Domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":301,"score":0.0,"start":97},{"end":656,"score":0.0,"start":428}],"model":"1wkbA01","name":"HUPs"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.740.10","interpro_id":"IPR009008","interpro_name":"Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain","interpro_type":"Homologous_superfamily","locations":[{"end":356,"score":1.6000000186977559e-6,"start":314}],"model":"2v0cA02","name":"Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_02004","interpro_id":"IPR002303","interpro_name":"Valine-tRNA ligase","interpro_type":"Family","locations":[{"end":980,"score":0.0,"start":92}],"model":"MF_02004","name":"Valine--tRNA ligase [valS]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00133","interpro_id":"IPR002300","interpro_name":"Aminoacyl-tRNA synthetase, class Ia","interpro_type":"Domain","locations":[{"end":732,"score":0.0,"start":109}],"model":"PF00133","name":"tRNA synthetases class I (I, L, M and V)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08264","interpro_id":"IPR013155","interpro_name":"Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding","interpro_type":"Domain","locations":[{"end":924,"score":6.500000044121887e-32,"start":777}],"model":"PF08264","name":"Anticodon-binding domain of tRNA ligase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00986","interpro_id":"IPR002303","interpro_name":"Valine-tRNA ligase","interpro_type":"Family","locations":[{"end":146,"score":4.000000143756519e-36,"start":135},{"end":363,"score":4.000000143756519e-36,"start":346},{"end":475,"score":4.000000143756519e-36,"start":462},{"end":597,"score":4.000000143756519e-36,"start":576},{"end":625,"score":4.000000143756519e-36,"start":607}],"model":"PR00986","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00178","interpro_id":"IPR001412","interpro_name":"Aminoacyl-tRNA synthetase, class I, conserved site","interpro_type":"Conserved_site","locations":[{"end":153,"score":0.0,"start":142}],"model":"PS00178","name":"Aminoacyl-transfer RNA synthetases class-I signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11946","interpro_id":"IPR002303","interpro_name":"Valine-tRNA ligase","interpro_type":"Family","locations":[{"end":980,"score":0.0,"start":73}],"model":"PTHR11946:SF109","name":"VALYL-TRNA SYNTHETASES"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47323","interpro_id":"IPR009080","interpro_name":"Aminoacyl-tRNA synthetase, class Ia, anticodon-binding","interpro_type":"Homologous_superfamily","locations":[{"end":972,"score":0.0,"start":743}],"model":"0037566","name":"Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50677","interpro_id":"IPR009008","interpro_name":"Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain","interpro_type":"Homologous_superfamily","locations":[{"end":457,"score":0.0,"start":309}],"model":"0046954","name":"ValRS/IleRS/LeuRS editing domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52374","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":742,"score":0.0,"start":95}],"model":"0039071","name":"Nucleotidylyl transferase"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00422","interpro_id":"IPR002303","interpro_name":"Valine-tRNA ligase","interpro_type":"Family","locations":[{"end":960,"score":0.0,"start":98}],"model":"TIGR00422","name":"valine--tRNA ligase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00817","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":731,"score":0.0,"start":133}],"model":"cd00817","name":"catalytic core domain of valyl-tRNA synthetases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07962","interpro_id":"IPR033705","interpro_name":"Valyl tRNA synthetase, anticodon-binding domain","interpro_type":"Domain","locations":[{"end":868,"score":0.0,"start":731}],"model":"cd07962","name":"Anticodon-binding domain of valyl tRNA synthetases"}],"location":{"chromosome_name":"supercont5.1","end_pos":3332042,"start_pos":3328879,"strand":"forward"},"low_complexity_region_coords":[[37,73],[483,489],[556,565]],"name":"vrs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00443","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12651","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00443","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1709.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00443","ortholog_taxonid":4932,"ortholog_uniquename":"YGR094W","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic valine-tRNA ligase Vrs1/Vas1","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016788","GO:0006520","GO:0006399","GO:0005829","GO:0002181","GO:0016874","GO:0140098","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002161":null,"GO:0002181":null,"GO:0004832":null,"GO:0005524":null,"GO:0005737":null,"GO:0005829":null,"GO:0061475":null,"GO:0106074":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00443.1"],"transcripts_by_uniquename":{"SJAG_00443.1":null},"uniprot_identifier":"B6JVM8","uniquename":"SJAG_00443"}


id: SJAG_00444
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85624],"is_not":false,"summary":null,"term":"GO:0044205"},{"annotations":[85625],"is_not":false,"summary":null,"term":"GO:0019856"}],"cellular_component":[{"annotations":[85622],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[85623],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85626],"is_not":false,"summary":null,"term":"GO:0004151"}]},"dbxrefs":["InterPro:IPR004721","GOA:B6JVM9","InterPro:IPR032466","InterPro:IPR002195","InterPro:IPR006680","EnsemblGenomes-Tr:EEB05430","EnsemblGenomes-Gn:SJAG_00444","UniProtKB/TrEMBL:B6JVM9"],"deletion_viability":"unknown","disordered_region_coords":[[131,135],[139,141],[143,144],[224,225],[248,249],[252,253]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"},{"name":"suc1","uniquename":"SJAG_00439"}],"genes_by_uniquename":{"SJAG_00444":null,"SPAC16.03c":null,"YLR420W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.140","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":338,"score":0.0,"start":1}],"model":"2z26B00","name":"Metal-dependent hydrolases"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00219","interpro_id":"IPR004721","interpro_name":"Dihydroorotase homodimeric type","interpro_type":"Family","locations":[{"end":337,"score":0.0,"start":2}],"model":"MF_00219","name":"Dihydroorotase [pyrC]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04909","interpro_id":"IPR006680","interpro_name":"Amidohydrolase-related","interpro_type":"Domain","locations":[{"end":176,"score":1.5999999902760464e-7,"start":80}],"model":"PF04909","name":"Amidohydrolase"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001237","interpro_id":"IPR004721","interpro_name":"Dihydroorotase homodimeric type","interpro_type":"Family","locations":[{"end":339,"score":0.0,"start":1}],"model":"PIRSF001237","name":"Dihydroorotase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00482","interpro_id":"IPR002195","interpro_name":"Dihydroorotase, conserved site","interpro_type":"Conserved_site","locations":[{"end":19,"score":0.0,"start":11}],"model":"PS00482","name":"Dihydroorotase signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00483","interpro_id":"IPR002195","interpro_name":"Dihydroorotase, conserved site","interpro_type":"Conserved_site","locations":[{"end":251,"score":0.0,"start":240}],"model":"PS00483","name":"Dihydroorotase signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43137","interpro_id":"IPR004721","interpro_name":"Dihydroorotase homodimeric type","interpro_type":"Family","locations":[{"end":337,"score":0.0,"start":2}],"model":"PTHR43137:SF1","name":"DIHYDROOROTASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51556","interpro_id":"IPR032466","interpro_name":"Metal-dependent hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":336,"score":0.0,"start":1}],"model":"0047525","name":"Metallo-dependent hydrolases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00856","interpro_id":"IPR004721","interpro_name":"Dihydroorotase homodimeric type","interpro_type":"Family","locations":[{"end":336,"score":0.0,"start":5}],"model":"TIGR00856","name":"dihydroorotase, homodimeric type"}],"location":{"chromosome_name":"supercont5.1","end_pos":3328439,"start_pos":3327350,"strand":"reverse"},"name":"ura2","ortholog_annotations":[{"gene_uniquename":"SJAG_00444","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00444","ortholog_taxonid":4932,"ortholog_uniquename":"YLR420W","reference_uniquename":"PMID:29761456"}],"product":"dihydroorotase Ura2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055086","GO:0005634","GO:0016810"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004151":null,"GO:0005634":null,"GO:0005737":null,"GO:0019856":null,"GO:0044205":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00444.1"],"transcripts_by_uniquename":{"SJAG_00444.1":null},"uniprot_identifier":"B6JVM9","uniquename":"SJAG_00444"}


id: SJAG_00445
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114396],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[114388],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[114390],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[114392],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[114394],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[114398],"is_not":false,"summary":null,"term":"GO:0022857"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVN0","EnsemblGenomes-Tr:EEB05431","EnsemblGenomes-Gn:SJAG_00445","InterPro:IPR036259","GOA:B6JVN0","InterPro:IPR020846"],"deletion_viability":"unknown","disordered_region_coords":[[16,17],[45,50]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"},{"name":"rsc4","uniquename":"SJAG_00440"}],"genes_by_uniquename":{"SJAG_00445":null,"SPCC757.11c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1250.20","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":472,"score":5.399999866660538e-30,"start":65}],"model":"3wdoA01","name":"MFS general substrate transporter like domains"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50850","interpro_id":"IPR020846","interpro_name":"Major facilitator superfamily domain","interpro_type":"Domain","locations":[{"end":476,"score":0.0,"start":67}],"model":"PS50850","name":"Major facilitator superfamily (MFS) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23510","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":476,"score":0.0,"start":47}],"model":"PTHR23510:SF64","name":"INNER MEMBRANE TRANSPORT PROTEIN YAJR"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103473","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":478,"score":5.230000061723715e-32,"start":64}],"model":"0042480","name":"MFS general substrate transporter"}],"location":{"chromosome_name":"supercont5.1","end_pos":3327165,"start_pos":3325723,"strand":"forward"},"low_complexity_region_coords":[[97,101],[359,379]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00445","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC757.11c","reference_uniquename":"PMID:26896847"}],"product":"MFS transporter superfamily","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null},"subset_termids":["GO:0055085","GO:0022857","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0016020":null,"GO:0022857":null,"GO:0032153":null,"GO:0051286":null,"GO:0055085":null},"tm_domain_coords":[[68,90],[105,127],[132,154],[158,180],[199,221],[236,258],[293,315],[330,352],[359,378],[388,410],[423,445],[450,472]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00445.1"],"transcripts_by_uniquename":{"SJAG_00445.1":null},"uniprot_identifier":"B6JVN0","uniquename":"SJAG_00445"}


id: SJAG_00446
data:
  {"coiled_coil_coords":[[150,193]],"cv_annotations":{"biological_process":[{"annotations":[105363],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[105364],"is_not":false,"summary":null,"term":"GO:0000398"}],"cellular_component":[{"annotations":[105358],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[105359],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[105360],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[105361],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[105362],"is_not":false,"summary":null,"term":"GO:0005681"}],"molecular_function":[{"annotations":[105365],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVN1","EnsemblGenomes-Gn:SJAG_00446","GOA:B6JVN1","EnsemblGenomes-Tr:EEB05432","InterPro:IPR006973"],"deletion_viability":"unknown","disordered_region_coords":[[1,92],[95,203],[206,208],[222,224],[226,237]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"},{"name":"pst3","uniquename":"SJAG_00441"}],"genes_by_uniquename":{"HGNC:26939":null,"SJAG_00446":null,"SPBC337.06c":null,"YDR163W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04889","interpro_id":"IPR006973","interpro_name":"Pre-mRNA-splicing factor Cwf15/Cwc15","interpro_type":"Family","locations":[{"end":255,"score":0.0,"start":1}],"model":"PF04889","name":"Cwf15/Cwc15 cell cycle control protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12718","interpro_id":"IPR006973","interpro_name":"Pre-mRNA-splicing factor Cwf15/Cwc15","interpro_type":"Family","locations":[{"end":254,"score":0.0,"start":1}],"model":"PTHR12718:SF2","name":"CELL CYCLE CONTROL PROTEIN CWF15"}],"location":{"chromosome_name":"supercont5.1","end_pos":3324798,"start_pos":3323982,"strand":"reverse"},"low_complexity_region_coords":[[109,127],[138,193]],"name":"cwf15","ortholog_annotations":[{"gene_uniquename":"SJAG_00446","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26939","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00446","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00446","ortholog_taxonid":4932,"ortholog_uniquename":"YDR163W","reference_uniquename":"PMID:29761456"}],"product":"Prp19 complex subunit Cwf15","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000398":null,"GO:0000974":null,"GO:0003723":null,"GO:0005634":null,"GO:0005681":null,"GO:0045292":null,"GO:0071013":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00446.1"],"transcripts_by_uniquename":{"SJAG_00446.1":null},"uniprot_identifier":"B6JVN1","uniquename":"SJAG_00446"}


id: SJAG_00447
data:
  {"coiled_coil_coords":[[385,405]],"cv_annotations":{"biological_process":[{"annotations":[105354],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[105351],"is_not":false,"summary":null,"term":"GO:0005832"},{"annotations":[105352],"is_not":false,"summary":null,"term":"GO:0005856"},{"annotations":[105353],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[105355],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[105356],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[105357],"is_not":false,"summary":null,"term":"GO:0140662"},{"annotations":[72704],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05433","InterPro:IPR027413","InterPro:IPR027409","InterPro:IPR017998","InterPro:IPR002423","UniProtKB/TrEMBL:B6JVN2","EnsemblGenomes-Gn:SJAG_00447","GOA:B6JVN2","InterPro:IPR002194","InterPro:IPR012721","InterPro:IPR027410"],"deletion_viability":"unknown","disordered_region_coords":[[89,90],[478,484],[543,546],[531,530]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"},{"name":"chs2","uniquename":"SJAG_00442"}],"genes_by_uniquename":{"HGNC:15553":null,"SJAG_00447":null,"SPBC337.05c":null,"YJL008C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.560.10","interpro_id":"IPR027413","interpro_name":"GroEL-like equatorial domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":526,"score":0.0,"start":35}],"model":"3kttB01","name":"GroEL-like equatorial domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.260.10","interpro_id":"IPR027410","interpro_name":"TCP-1-like chaperonin intermediate domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":406,"score":0.0,"start":148}],"model":"3kttB02","name":"TCP-1-like chaperonin intermediate domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.50.7.10","interpro_id":"IPR027409","interpro_name":"GroEL-like apical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":370,"score":0.0,"start":219}],"model":"3kttB03","name":"GroEL"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00118","interpro_id":"IPR002423","interpro_name":"Chaperonin Cpn60/GroEL/TCP-1 family","interpro_type":"Family","locations":[{"end":530,"score":0.0,"start":38}],"model":"PF00118","name":"TCP-1/cpn60 chaperonin family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00304","interpro_id":"IPR017998","interpro_name":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_type":"Family","locations":[{"end":56,"score":4.199999983466609e-24,"start":40},{"end":80,"score":4.199999983466609e-24,"start":62},{"end":111,"score":4.199999983466609e-24,"start":92},{"end":396,"score":4.199999983466609e-24,"start":374},{"end":420,"score":4.199999983466609e-24,"start":408}],"model":"PR00304","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00750","interpro_id":"IPR002194","interpro_name":"Chaperonin TCP-1, conserved site","interpro_type":"Conserved_site","locations":[{"end":55,"score":0.0,"start":43}],"model":"PS00750","name":"Chaperonins TCP-1 signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00751","interpro_id":"IPR002194","interpro_name":"Chaperonin TCP-1, conserved site","interpro_type":"Conserved_site","locations":[{"end":80,"score":0.0,"start":64}],"model":"PS00751","name":"Chaperonins TCP-1 signature 2"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00995","interpro_id":"IPR002194","interpro_name":"Chaperonin TCP-1, conserved site","interpro_type":"Conserved_site","locations":[{"end":100,"score":0.0,"start":92}],"model":"PS00995","name":"Chaperonins TCP-1 signature 3"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11353","interpro_id":"IPR017998","interpro_name":"Chaperone tailless complex polypeptide 1 (TCP-1)","interpro_type":"Family","locations":[{"end":529,"score":0.0,"start":21}],"model":"PTHR11353:SF19","name":"CHAPERONIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48592","interpro_id":"IPR027413","interpro_name":"GroEL-like equatorial domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":530,"score":0.0,"start":24}],"model":"0044965","name":"GroEL equatorial domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52029","interpro_id":"IPR027409","interpro_name":"GroEL-like apical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":379,"score":5.490287383224633e-42,"start":215}],"model":"0047016","name":"GroEL apical domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54849","interpro_id":"IPR027410","interpro_name":"TCP-1-like chaperonin intermediate domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":407,"score":2.7800000641860795e-26,"start":157}],"model":"0045722","name":"GroEL-intermediate domain like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR02346","interpro_id":"IPR012721","interpro_name":"T-complex protein 1, theta subunit","interpro_type":"Family","locations":[{"end":537,"score":0.0,"start":11}],"model":"TIGR02346","name":"T-complex protein 1 subunit theta"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03341","interpro_id":"IPR012721","interpro_name":"T-complex protein 1, theta subunit","interpro_type":"Family","locations":[{"end":527,"score":0.0,"start":19}],"model":"cd03341","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3323594,"start_pos":3321656,"strand":"reverse"},"low_complexity_region_coords":[[108,122],[231,241],[531,542]],"name":"cct8","ortholog_annotations":[{"gene_uniquename":"SJAG_00447","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15553","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00447","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00447","ortholog_taxonid":4932,"ortholog_uniquename":"YJL008C","reference_uniquename":"PMID:29761456"}],"product":"chaperonin-containing T-complex theta subunit Cct8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0051604","GO:0051082","GO:0005829","GO:0016887","GO:0006457"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005829":null,"GO:0005832":null,"GO:0005856":null,"GO:0006457":null,"GO:0016887":null,"GO:0051082":null,"GO:0140662":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00447.1"],"transcripts_by_uniquename":{"SJAG_00447.1":null},"uniprot_identifier":"B6JVN2","uniquename":"SJAG_00447"}


id: SJAG_00448
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105350],"is_not":false,"summary":null,"term":"GO:0031124"}],"cellular_component":[{"annotations":[105347],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105348],"is_not":false,"summary":null,"term":"GO:0033620"},{"annotations":[105349],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[64345],"is_not":false,"summary":null,"term":"GO:0099122"}]},"dbxrefs":["InterPro:IPR006903","EnsemblGenomes-Gn:SJAG_00448","InterPro:IPR008942","EnsemblGenomes-Tr:EEB05434","GOA:B6JVN3","InterPro:IPR006569","UniProtKB/TrEMBL:B6JVN3"],"deletion_viability":"unknown","disordered_region_coords":[[187,192],[196,206],[230,231],[233,238],[243,246],[254,255],[279,312],[314,320],[324,325],[328,336],[339,341],[258,267]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"},{"name":"vrs1","uniquename":"SJAG_00443"}],"genes_by_uniquename":{"HGNC:16209":null,"HGNC:25560":null,"SJAG_00448":null,"SPBC337.03":null,"YDR289C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.90","interpro_id":"IPR008942","interpro_name":"ENTH/VHS","interpro_type":"Homologous_superfamily","locations":[{"end":136,"score":5.100000157819561e-33,"start":1}],"model":"5m9dA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04818","interpro_id":"IPR006569","interpro_name":"CID domain","interpro_type":"Domain","locations":[{"end":125,"score":4.399999957529009e-31,"start":7}],"model":"PF04818","name":"CID domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51391","interpro_id":"IPR006569","interpro_name":"CID domain","interpro_type":"Domain","locations":[{"end":133,"score":0.0,"start":1}],"model":"PS51391","name":"CID domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12460","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":308,"score":1.6999999955788275e-15,"start":7}],"model":"PTHR12460:SF0","name":"CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00582","interpro_id":"IPR006569","interpro_name":"CID domain","interpro_type":"Domain","locations":[{"end":130,"score":1.3000000377525586e-35,"start":7}],"model":"SM00582","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48464","interpro_id":"IPR008942","interpro_name":"ENTH/VHS","interpro_type":"Homologous_superfamily","locations":[{"end":130,"score":3.5300000668034032e-15,"start":9}],"model":"0049499","name":"ENTH/VHS domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17003","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":129,"score":0.0,"start":5}],"model":"cd17003","name":"CID (CTD-Interacting Domain) of yeast transcription termination factor Rtt103 and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3321419,"start_pos":3319968,"strand":"forward"},"low_complexity_region_coords":[[56,62],[80,92],[85,99],[268,278]],"name":"rhn1","ortholog_annotations":[{"gene_uniquename":"SJAG_00448","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16209","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25560","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00448","ortholog_taxonid":4932,"ortholog_uniquename":"YDR289C","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase II 3' end processing-associated factor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0031124":null,"GO:0033620":null,"GO:0099122":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00448.1"],"transcripts_by_uniquename":{"SJAG_00448.1":null},"uniprot_identifier":"B6JVN3","uniquename":"SJAG_00448"}


id: SJAG_00449
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103615],"is_not":false,"summary":null,"term":"GO:0033617"},{"annotations":[103616],"is_not":false,"summary":null,"term":"GO:0015680"}],"cellular_component":[{"annotations":[103613],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103614],"is_not":false,"summary":null,"term":"GO:0005758"}],"molecular_function":[{"annotations":[103617],"is_not":false,"summary":null,"term":"GO:0016531"},{"annotations":[103618],"is_not":false,"summary":null,"term":"GO:0005507"}]},"dbxrefs":["InterPro:IPR009069","UniProtKB/TrEMBL:B6JVN4","EnsemblGenomes-Gn:SJAG_00449","GOA:B6JVN4","InterPro:IPR007745","EnsemblGenomes-Tr:EEB05435"],"deletion_viability":"unknown","disordered_region_coords":[[1,16]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"},{"uniquename":"SJAG_00445"},{"name":"ura2","uniquename":"SJAG_00444"}],"genes_by_uniquename":{"HGNC:2264":null,"SJAG_00449":null,"SPBC26H8.14c":null,"YLL009C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.1130","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":67,"score":8.899999730184925e-24,"start":5}],"model":"1u97A00","name":"CytochromE C oxidase copper chaperone"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05051","interpro_id":"IPR007745","interpro_name":"Cytochrome c oxidase copper chaperone","interpro_type":"Family","locations":[{"end":67,"score":4.699999850847956e-21,"start":20}],"model":"PF05051","name":"Cytochrome C oxidase copper chaperone (COX17)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51808","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":67,"score":0.0,"start":25}],"model":"PS51808","name":"Coiled coil-helix-coiled coil-helix (CHCH) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR16719","interpro_id":"IPR007745","interpro_name":"Cytochrome c oxidase copper chaperone","interpro_type":"Family","locations":[{"end":67,"score":2.299999913052029e-16,"start":9}],"model":"PTHR16719:SF0","name":"CYTOCHROME C OXIDASE COPPER CHAPERONE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47072","interpro_id":"IPR009069","interpro_name":"Cysteine alpha-hairpin motif superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":67,"score":1.4399999744971916e-21,"start":10}],"model":"0049827","name":"Cysteine alpha-hairpin motif"}],"location":{"chromosome_name":"supercont5.1","end_pos":3319734,"start_pos":3319399,"strand":"reverse"},"name":"cox17","ortholog_annotations":[{"gene_uniquename":"SJAG_00449","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2264","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00449","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC26H8.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00449","ortholog_taxonid":4932,"ortholog_uniquename":"YLL009C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140104","GO:0051604","GO:0007005","GO:0065003","GO:0005829","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005507":null,"GO:0005758":null,"GO:0005829":null,"GO:0015680":null,"GO:0016531":null,"GO:0033617":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00449.1"],"transcripts_by_uniquename":{"SJAG_00449.1":null},"uniprot_identifier":"B6JVN4","uniquename":"SJAG_00449"}


id: SJAG_00450
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[77412],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[77413],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[66632],"is_not":false,"summary":null,"term":"GO:0008418"},{"annotations":[77414],"is_not":false,"summary":null,"term":"GO:0070773"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVN5","EnsemblGenomes-Gn:SJAG_00450","GOA:B6JVN5","InterPro:IPR023128","EnsemblGenomes-Tr:EEB05436","InterPro:IPR037132","InterPro:IPR039733"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"},{"name":"cwf15","uniquename":"SJAG_00446"}],"genes_by_uniquename":{"SJAG_00450":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.620.10","interpro_id":"IPR037132","interpro_name":"Protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":210,"score":0.0,"start":4}],"model":"3c9qA00","name":"Protein N-terminal glutamine amidohydrolase, alpha beta roll"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09764","interpro_id":"IPR023128","interpro_name":"Protein N-terminal glutamine amidohydrolase, alpha beta roll","interpro_type":"Domain","locations":[{"end":205,"score":0.0,"start":24}],"model":"PF09764","name":"N-terminal glutamine amidase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13035","interpro_id":"IPR039733","interpro_name":"Protein N-terminal glutamine amidohydrolase","interpro_type":"Family","locations":[{"end":192,"score":0.0,"start":5}],"model":"PTHR13035:SF0","name":"UNCHARACTERIZED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3318785,"start_pos":3317747,"strand":"forward"},"product":"protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"subset_termids":["GO:0140096","GO:0005829","GO:0005634","GO:0016810"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008418":null,"GO:0070773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00450.1"],"transcripts_by_uniquename":{"SJAG_00450.1":null},"uniprot_identifier":"B6JVN5","uniquename":"SJAG_00450"}


id: SJAG_00451
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[73180],"is_not":false,"summary":null,"term":"GO:0004181"},{"annotations":[105366],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6JVN6","EnsemblGenomes-Tr:EEB05437","InterPro:IPR000834","UniProtKB/TrEMBL:B6JVN6","EnsemblGenomes-Gn:SJAG_00451"],"deletion_viability":"unknown","disordered_region_coords":[[34,36],[42,43],[101,102],[168,168],[130,132],[152,153]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"},{"name":"cct8","uniquename":"SJAG_00447"}],"genes_by_uniquename":{"HGNC:15722":null,"HGNC:15740":null,"HGNC:2296":null,"HGNC:2297":null,"HGNC:2298":null,"SJAG_00451":null,"SPBC337.07c":null,"YHR132C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":496,"score":0.0,"start":176}],"model":"4p10A02","name":"Zn peptidases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00246","interpro_id":"IPR000834","interpro_name":"Peptidase M14, carboxypeptidase A","interpro_type":"Domain","locations":[{"end":483,"score":0.0,"start":191}],"model":"PF00246","name":"Zinc carboxypeptidase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00765","interpro_id":"IPR000834","interpro_name":"Peptidase M14, carboxypeptidase A","interpro_type":"Domain","locations":[{"end":221,"score":2.3999999904100733e-11,"start":209},{"end":252,"score":2.3999999904100733e-11,"start":238},{"end":326,"score":2.3999999904100733e-11,"start":318},{"end":389,"score":2.3999999904100733e-11,"start":376}],"model":"PR00765","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00132","interpro_id":"IPR000834","interpro_name":"Peptidase M14, carboxypeptidase A","interpro_type":"Domain","locations":[{"end":260,"score":0.0,"start":238}],"model":"PS00132","name":"Zinc carboxypeptidases, zinc-binding region 1 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11705","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":491,"score":0.0,"start":80}],"model":"PTHR11705:SF147","name":"PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00631","interpro_id":"IPR000834","interpro_name":"Peptidase M14, carboxypeptidase A","interpro_type":"Domain","locations":[{"end":482,"score":0.0,"start":183}],"model":"SM00631","name":""},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53187","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":494,"score":0.0,"start":179}],"model":"0051496","name":"Zn-dependent exopeptidases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54897","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":127,"score":1.2299999525566818e-6,"start":58}],"model":"0052023","name":"Protease propeptides/inhibitors"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03860","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":494,"score":0.0,"start":183}],"model":"cd03860","name":"Peptidase M14 carboxypeptidase subfamily A/B-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3316953,"start_pos":3315238,"strand":"forward"},"low_complexity_region_coords":[[133,151],[154,167],[348,365]],"name":"ecm14","ortholog_annotations":[{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15722","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15740","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2296","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2297","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2298","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00451","ortholog_taxonid":4932,"ortholog_uniquename":"YHR132C","reference_uniquename":"PMID:29761456"}],"product":"pseudopeptidase Ecm14","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0008233","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004181":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00451.1"],"transcripts_by_uniquename":{"SJAG_00451.1":null},"uniprot_identifier":"B6JVN6","uniquename":"SJAG_00451"}


id: SJAG_00452
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105369],"is_not":false,"summary":null,"term":"GO:0051321"},{"annotations":[105370],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[105371],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[105367],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[105368],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105372],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[105373],"is_not":false,"summary":null,"term":"GO:0031386"},{"annotations":[69396],"is_not":false,"summary":null,"term":"GO:0031625"}]},"dbxrefs":["GOA:B6JVN7","EnsemblGenomes-Gn:SJAG_00452","InterPro:IPR000626","InterPro:IPR029071","UniProtKB/TrEMBL:B6JVN7","EnsemblGenomes-Tr:EEB05438","InterPro:IPR019954","InterPro:IPR019956"],"deletion_viability":"unknown","disordered_region_coords":[[26,32],[41,44],[102,108],[117,120],[178,184],[193,196],[254,260],[269,272],[330,336]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"},{"name":"rhn1","uniquename":"SJAG_00448"}],"genes_by_uniquename":{"HGNC:12463":null,"HGNC:12468":null,"SJAG_00452":null,"SPBC337.08c":null,"YLL039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.90","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":76,"score":0.0,"start":1},{"end":152,"score":0.0,"start":77},{"end":228,"score":0.0,"start":153},{"end":304,"score":0.0,"start":229},{"end":382,"score":0.0,"start":305}],"model":"2kdiA00","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00240","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like domain","interpro_type":"Domain","locations":[{"end":74,"score":2.000000047484456e-32,"start":3},{"end":150,"score":2.000000047484456e-32,"start":79},{"end":226,"score":2.000000047484456e-32,"start":155},{"end":302,"score":2.000000047484456e-32,"start":231},{"end":378,"score":2.000000047484456e-32,"start":307}],"model":"PF00240","name":"Ubiquitin family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00348","interpro_id":"IPR019956","interpro_name":"Ubiquitin domain","interpro_type":"Domain","locations":[{"end":31,"score":6.74000010591142e-38,"start":11},{"end":52,"score":6.74000010591142e-38,"start":32},{"end":74,"score":6.74000010591142e-38,"start":53}],"model":"PR00348","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00299","interpro_id":"IPR019954","interpro_name":"Ubiquitin conserved site","interpro_type":"Conserved_site","locations":[{"end":52,"score":0.0,"start":27},{"end":128,"score":0.0,"start":103},{"end":204,"score":0.0,"start":179},{"end":280,"score":0.0,"start":255},{"end":356,"score":0.0,"start":331}],"model":"PS00299","name":"Ubiquitin domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50053","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like domain","interpro_type":"Domain","locations":[{"end":76,"score":0.0,"start":1},{"end":152,"score":0.0,"start":77},{"end":228,"score":0.0,"start":153},{"end":304,"score":0.0,"start":229},{"end":380,"score":0.0,"start":305}],"model":"PS50053","name":"Ubiquitin domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10666","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":156,"score":0.0,"start":77}],"model":"PTHR10666:SF451","name":"UBIQUITIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00213","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like domain","interpro_type":"Domain","locations":[{"end":72,"score":9.299999894786709e-35,"start":1},{"end":148,"score":9.299999894786709e-35,"start":77},{"end":224,"score":9.299999894786709e-35,"start":153},{"end":300,"score":9.299999894786709e-35,"start":229},{"end":376,"score":9.299999894786709e-35,"start":305}],"model":"SM00213","name":"Ubiquitin homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54236","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":76,"score":2.489999908507934e-33,"start":1},{"end":152,"score":1.0399999842842988e-33,"start":76},{"end":228,"score":7.4599998501826545e-34,"start":152},{"end":304,"score":1.0399999842842988e-33,"start":228},{"end":380,"score":6.0100000177945154e-34,"start":304}],"model":"0050460","name":"Ubiquitin-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01803","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":76,"score":0.0,"start":1},{"end":152,"score":0.0,"start":77},{"end":228,"score":0.0,"start":153},{"end":304,"score":0.0,"start":229},{"end":380,"score":0.0,"start":305}],"model":"cd01803","name":"ubiquitin-like (Ubl) domain found in ubiquitin"}],"location":{"chromosome_name":"supercont5.1","end_pos":3314790,"start_pos":3313642,"strand":"forward"},"name":"ubi4","ortholog_annotations":[{"gene_uniquename":"SJAG_00452","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12463","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12468","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00452","ortholog_taxonid":4932,"ortholog_uniquename":"YLL039C","reference_uniquename":"PMID:29761456"}],"product":"protein modifier, ubiquitin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0030234","GO:0016071","GO:0098772","GO:0031386","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004857":null,"GO:0005634":null,"GO:0005737":null,"GO:0031386":null,"GO:0031625":null,"GO:0033621":null,"GO:0043161":null,"GO:0051321":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00452.1"],"transcripts_by_uniquename":{"SJAG_00452.1":null},"uniprot_identifier":"B6JVN7","uniquename":"SJAG_00452"}


id: SJAG_00453
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105376],"is_not":false,"summary":null,"term":"GO:0006696"}],"cellular_component":[{"annotations":[105374],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[105375],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[105377],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["GOA:B6JVN8","UniProtKB/TrEMBL:B6JVN8","EnsemblGenomes-Gn:SJAG_00453","InterPro:IPR005352","EnsemblGenomes-Tr:EEB05439"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"},{"name":"cox17","uniquename":"SJAG_00449"}],"genes_by_uniquename":{"HGNC:1187":null,"SJAG_00453":null,"SPBC337.09":null,"YER044C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03694","interpro_id":"IPR005352","interpro_name":"Erg28","interpro_type":"Family","locations":[{"end":122,"score":1.1000192944949814e-41,"start":13}],"model":"PF03694","name":"Erg28 like protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15451","interpro_id":"IPR005352","interpro_name":"Erg28","interpro_type":"Family","locations":[{"end":132,"score":3.2000000576080303e-34,"start":11}],"model":"PTHR15451:SF19","name":"ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3312648,"start_pos":3312232,"strand":"reverse"},"name":"erg28","ortholog_annotations":[{"gene_uniquename":"SJAG_00453","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1187","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00453","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00453","ortholog_taxonid":4932,"ortholog_uniquename":"YER044C","reference_uniquename":"PMID:29761456"}],"product":"Erg28 protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005789","GO:0006629","GO:0060090","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005789":null,"GO:0006696":null,"GO:0030674":null},"tm_domain_coords":[[12,34],[78,100],[107,126]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00453.1"],"transcripts_by_uniquename":{"SJAG_00453.1":null},"uniprot_identifier":"B6JVN8","uniquename":"SJAG_00453"}


id: SJAG_00454
data:
  {"coiled_coil_coords":[[42,93]],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00454","EnsemblGenomes-Tr:EEB05440","UniProtKB/TrEMBL:B6JVN9"],"deletion_viability":"unknown","disordered_region_coords":[[1,31],[53,76],[85,87]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"},{"uniquename":"SJAG_07017"}],"genes_by_uniquename":{"SJAG_00454":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3311605,"start_pos":3311264,"strand":"reverse"},"product":"Schizosaccharomyces japonicus specific protein","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00454.1"],"transcripts_by_uniquename":{"SJAG_00454.1":null},"uniprot_identifier":"B6JVN9","uniquename":"SJAG_00454"}


id: SJAG_00455
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105381],"is_not":false,"summary":null,"term":"GO:0044572"}],"cellular_component":[{"annotations":[105378],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105379],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[105380],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105382],"is_not":false,"summary":null,"term":"GO:0051537"},{"annotations":[105383],"is_not":false,"summary":null,"term":"GO:0051539"},{"annotations":[105384],"is_not":false,"summary":null,"term":"GO:0009055"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05441","InterPro:IPR007785","EnsemblGenomes-Gn:SJAG_00455","InterPro:IPR031838","UniProtKB/Swiss-Prot:B6JVP0","GOA:B6JVP0"],"deletion_viability":"unknown","disordered_region_coords":[[164,171],[173,173],[187,188],[194,195],[199,199],[232,236]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"},{"uniquename":"SJAG_00450"}],"genes_by_uniquename":{"HGNC:28050":null,"SJAG_00455":null,"SPBC337.10c":null,"YKR071C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_03115","interpro_id":"IPR007785","interpro_name":"Anamorsin","interpro_type":"Family","locations":[{"end":309,"score":0.0,"start":1}],"model":"MF_03115","name":"Fe-S cluster assembly protein <gene_name> [DRE2]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05093","interpro_id":"IPR046408","interpro_name":"Anamorsin, C-terminal","interpro_type":"Domain","locations":[{"end":294,"score":1.8000000809395768e-30,"start":204}],"model":"PF05093","name":"Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16803","interpro_id":"IPR031838","interpro_name":"Fe-S cluster assembly protein Dre2, N-terminal","interpro_type":"Domain","locations":[{"end":135,"score":1.7999999365670533e-23,"start":3}],"model":"PF16803","name":"Fe-S cluster assembly protein DRE2 N-terminus"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13273","interpro_id":"IPR007785","interpro_name":"Anamorsin","interpro_type":"Family","locations":[{"end":298,"score":1.0999999767548716e-35,"start":3}],"model":"PTHR13273:SF14","name":"ANAMORSIN"}],"location":{"chromosome_name":"supercont5.1","end_pos":3310819,"start_pos":3309890,"strand":"forward"},"low_complexity_region_coords":[[174,186],[229,241]],"name":"dre2","ortholog_annotations":[{"gene_uniquename":"SJAG_00455","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28050","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00455","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00455","ortholog_taxonid":4932,"ortholog_uniquename":"YKR071C","reference_uniquename":"PMID:29761456"}],"product":"CIA machinery anamorsin Dre2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005739","GO:0016226","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005758":null,"GO:0005829":null,"GO:0009055":null,"GO:0044572":null,"GO:0051537":null,"GO:0051539":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00455.1"],"transcripts_by_uniquename":{"SJAG_00455.1":null},"uniprot_identifier":"B6JVP0","uniquename":"SJAG_00455"}


id: SJAG_00456
data:
  {"coiled_coil_coords":[[125,145]],"cv_annotations":{"biological_process":[{"annotations":[105389],"is_not":false,"summary":null,"term":"GO:0071030"},{"annotations":[105390],"is_not":false,"summary":null,"term":"GO:0033621"}],"cellular_component":[{"annotations":[105385],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[105386],"is_not":false,"summary":null,"term":"GO:1990477"},{"annotations":[105387],"is_not":false,"summary":null,"term":"GO:0016604"},{"annotations":[105388],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105391],"is_not":false,"summary":null,"term":"GO:0046872"}]},"dbxrefs":["GOA:B6JVP1","InterPro:IPR036855","InterPro:IPR000571","EnsemblGenomes-Tr:EEB05442","UniProtKB/TrEMBL:B6JVP1","EnsemblGenomes-Gn:SJAG_00456"],"deletion_viability":"unknown","disordered_region_coords":[[1,13],[26,97],[99,101],[110,113],[146,151],[343,368],[119,124]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"},{"name":"ecm14","uniquename":"SJAG_00451"}],"genes_by_uniquename":{"HGNC:28972":null,"SJAG_00456":null,"SPBC337.12":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.1000.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":290,"score":1.6999999955788275e-15,"start":235},{"end":353,"score":3.6000000136482413e-7,"start":291}],"model":"2d9nA00","name":"Zinc finger, CCCH-type"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14608","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":232,"score":0.009999999776482582,"start":213},{"end":258,"score":1.100000023841858,"start":240},{"end":285,"score":0.0006000000284984708,"start":267}],"model":"PF14608","name":"RNA-binding, Nab2-type zinc finger"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50103","interpro_id":"IPR000571","interpro_name":"Zinc finger, CCCH-type","interpro_type":"Domain","locations":[{"end":233,"score":0.0,"start":207},{"end":261,"score":0.0,"start":234},{"end":288,"score":0.0,"start":262},{"end":317,"score":0.0,"start":289}],"model":"PS50103","name":"Zinc finger C3H1-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46156","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":371,"score":0.0,"start":211}],"model":"PTHR46156:SF1","name":"CCCH ZINGC FINGER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00356","interpro_id":"IPR000571","interpro_name":"Zinc finger, CCCH-type","interpro_type":"Domain","locations":[{"end":234,"score":0.0009800000116229057,"start":208},{"end":260,"score":0.06700000166893005,"start":235},{"end":287,"score":0.0024999999441206455,"start":262},{"end":316,"score":0.0007800000021234155,"start":289},{"end":338,"score":60.0,"start":317}],"model":"SM00356","name":"zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF90229","interpro_id":"IPR036855","interpro_name":"Zinc finger, CCCH-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":314,"score":8.85999995592357e-10,"start":280}],"model":"0053908","name":"CCCH zinc finger"}],"location":{"chromosome_name":"supercont5.1","end_pos":3309087,"start_pos":3307707,"strand":"reverse"},"name":"red5","ortholog_annotations":[{"gene_uniquename":"SJAG_00456","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28972","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00456","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.12","reference_uniquename":"PMID:21511999"}],"product":"MTREC (exosome adaptor) complex zf-CCCH type zinc finger subunit Red5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005654","GO:0005694","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0016604":null,"GO:0033621":null,"GO:0046872":null,"GO:0071030":null,"GO:1990477":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00456.1"],"transcripts_by_uniquename":{"SJAG_00456.1":null},"uniprot_identifier":"B6JVP1","uniquename":"SJAG_00456"}


id: SJAG_00457
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105396],"is_not":false,"summary":null,"term":"GO:0009267"},{"annotations":[105397],"is_not":false,"summary":null,"term":"GO:0010507"},{"annotations":[105398],"is_not":false,"summary":null,"term":"GO:0110045"},{"annotations":[105399],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[105400],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[105392],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105393],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[105394],"is_not":false,"summary":null,"term":"GO:1990131"},{"annotations":[105395],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105401],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[105402],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[105403],"is_not":false,"summary":null,"term":"GO:0043539"}]},"dbxrefs":["InterPro:IPR006762","InterPro:IPR027417","GOA:B6JVP2","EnsemblGenomes-Gn:SJAG_00457","InterPro:IPR039397","UniProtKB/TrEMBL:B6JVP2","EnsemblGenomes-Tr:EEB05443"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"},{"name":"ubi4","uniquename":"SJAG_00452"}],"genes_by_uniquename":{"HGNC:16963":null,"HGNC:19901":null,"SJAG_00457":null,"SPBC337.13c":null,"YML121W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.450.190","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":305,"score":0.0,"start":178}],"model":"5x6vF00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":177,"score":0.0,"start":1}],"model":"6cesA01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04670","interpro_id":"IPR006762","interpro_name":"Gtr1/RagA G protein","interpro_type":"Family","locations":[{"end":232,"score":0.0,"start":4}],"model":"PF04670","name":"Gtr1/RagA G protein conserved region"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11259","interpro_id":"IPR006762","interpro_name":"Gtr1/RagA G protein","interpro_type":"Family","locations":[{"end":301,"score":0.0,"start":2}],"model":"PTHR11259:SF1","name":"RAS-RELATED GTP BINDING RAG/GTR YEAST"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":182,"score":1.0199999854196464e-25,"start":3}],"model":"0035641","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd11384","interpro_id":"IPR039397","interpro_name":"RagA/B","interpro_type":"Family","locations":[{"end":287,"score":0.0,"start":4}],"model":"cd11384","name":"Rag GTPase, subfamily of Ras-related GTPases, includes Ras-related GTP-binding proteins A and B"}],"location":{"chromosome_name":"supercont5.1","end_pos":3307294,"start_pos":3306371,"strand":"forward"},"low_complexity_region_coords":[[8,20]],"name":"gtr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00457","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16963","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19901","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00457","ortholog_taxonid":4932,"ortholog_uniquename":"YML121W","reference_uniquename":"PMID:29761456"}],"product":"RagA/B GTPase Gtr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030234","GO:0023052","GO:0006914","GO:0098772","GO:0005634","GO:0005773","GO:0003924","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0003924":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0009267":null,"GO:0010507":null,"GO:0043539":null,"GO:0110045":null,"GO:1904262":null,"GO:1904263":null,"GO:1990131":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00457.1"],"transcripts_by_uniquename":{"SJAG_00457.1":null},"uniprot_identifier":"B6JVP2","uniquename":"SJAG_00457"}


id: SJAG_00458
data:
  {"cv_annotations":{"biological_process":[{"annotations":[57859],"is_not":false,"summary":null,"term":"GO:0001172"},{"annotations":[105407],"is_not":false,"summary":null,"term":"GO:0006366"},{"annotations":[105408],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[105404],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[105405],"is_not":false,"summary":null,"term":"GO:0005665"},{"annotations":[105406],"is_not":false,"summary":null,"term":"GO:0016591"}],"molecular_function":[{"annotations":[105409],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[69872],"is_not":false,"summary":null,"term":"GO:0031369"}]},"dbxrefs":["InterPro:IPR010997","InterPro:IPR005574","EnsemblGenomes-Gn:SJAG_00458","EnsemblGenomes-Tr:EEB05444","GOA:B6JVP3","UniProtKB/TrEMBL:B6JVP3","InterPro:IPR006590","InterPro:IPR038324"],"deletion_viability":"unknown","disordered_region_coords":[[1,3],[13,15],[47,52]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"},{"name":"erg28","uniquename":"SJAG_00453"}],"genes_by_uniquename":{"HGNC:9191":null,"SJAG_00458":null,"SPBC337.14":null,"YJL140W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1250.40","interpro_id":"IPR038324","interpro_name":"Rpb4/RPC9 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":137,"score":0.0,"start":4}],"model":"3h0gD00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03874","interpro_id":"IPR005574","interpro_name":"RNA polymerase subunit Rpb4/RPC9","interpro_type":"Family","locations":[{"end":132,"score":3.5999998731341067e-23,"start":26}],"model":"PF03874","name":"RNA polymerase Rpb4"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21297","interpro_id":"IPR045222","interpro_name":"DNA-directed RNA polymerase II subunit Rpb4-like","interpro_type":"Family","locations":[{"end":136,"score":6.600000020929107e-29,"start":7}],"model":"PTHR21297:SF0","name":"DNA-DIRECTED RNA POLYMERASE II"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00657","interpro_id":"IPR006590","interpro_name":"RNA polymerase Rpb4/RPC9, core","interpro_type":"Domain","locations":[{"end":136,"score":0.0,"start":19}],"model":"SM00657","name":"DNA-directed RNA-polymerase II subunit"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47819","interpro_id":"IPR010997","interpro_name":"HRDC-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":135,"score":1.220000010438783e-38,"start":6}],"model":"0051176","name":"HRDC-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3305657,"start_pos":3305098,"strand":"reverse"},"name":"rpb4","ortholog_annotations":[{"gene_uniquename":"SJAG_00458","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9191","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00458","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00458","ortholog_taxonid":4932,"ortholog_uniquename":"YJL140W","reference_uniquename":"PMID:29761456"}],"product":"DNA-directed RNA polymerase II complex subunit Rpb4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0016779","GO:0005634","GO:0005654","GO:0140098"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001172":null,"GO:0003899":null,"GO:0005634":null,"GO:0005665":null,"GO:0006366":null,"GO:0006367":null,"GO:0016591":null,"GO:0031369":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00458.1"],"transcripts_by_uniquename":{"SJAG_00458.1":null},"uniprot_identifier":"B6JVP3","uniquename":"SJAG_00458"}


id: SJAG_00459
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105412],"is_not":false,"summary":null,"term":"GO:0006744"}],"cellular_component":[{"annotations":[105410],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[105411],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[105413],"is_not":false,"summary":null,"term":"GO:0008682"}]},"dbxrefs":["InterPro:IPR009078","EnsemblGenomes-Gn:SJAG_00459","GOA:B6JVP4","UniProtKB/TrEMBL:B6JVP4","EnsemblGenomes-Tr:EEB05445","InterPro:IPR011566"],"deletion_viability":"unknown","disordered_region_coords":[[37,43],[45,47]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"},{"uniquename":"SJAG_00454"}],"genes_by_uniquename":{"HGNC:2244":null,"SJAG_00459":null,"SPBC337.15c":null,"YOR125C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_01658","interpro_id":"IPR011566","interpro_name":"Ubiquinone biosynthesis protein Coq7","interpro_type":"Family","locations":[{"end":228,"score":0.0,"start":15}],"model":"MF_01658","name":"3-demethoxyubiquinol 3-hydroxylase [coq7]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03232","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":225,"score":0.0,"start":54}],"model":"PF03232","name":"Ubiquinone biosynthesis protein COQ7"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11237","interpro_id":"IPR011566","interpro_name":"Ubiquinone biosynthesis protein Coq7","interpro_type":"Family","locations":[{"end":227,"score":0.0,"start":19}],"model":"PTHR11237:SF4","name":"COENZYME Q10 BIOSYNTHESIS PROTEIN 7"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47240","interpro_id":"IPR009078","interpro_name":"Ferritin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":194,"score":7.440000183689649e-16,"start":57}],"model":"0050214","name":"Ferritin-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01042","interpro_id":"IPR011566","interpro_name":"Ubiquinone biosynthesis protein Coq7","interpro_type":"Family","locations":[{"end":227,"score":0.0,"start":55}],"model":"cd01042","name":"Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3304914,"start_pos":3304228,"strand":"forward"},"low_complexity_region_coords":[[24,36]],"name":"coq7","ortholog_annotations":[{"gene_uniquename":"SJAG_00459","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2244","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00459","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC337.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00459","ortholog_taxonid":4932,"ortholog_uniquename":"YOR125C","reference_uniquename":"PMID:29761456"}],"product":"3-demethoxyubiquinol 3-hydroxylase Coq7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006744","GO:0005739","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0006744":null,"GO:0008682":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00459.1"],"transcripts_by_uniquename":{"SJAG_00459.1":null},"uniprot_identifier":"B6JVP4","uniquename":"SJAG_00459"}


id: SJAG_00460
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99407],"is_not":false,"summary":null,"term":"GO:0006974"},{"annotations":[99408],"is_not":false,"summary":null,"term":"GO:0140013"},{"annotations":[99409],"is_not":false,"summary":null,"term":"GO:2000816"}],"cellular_component":[{"annotations":[99403],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[99404],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[99405],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[99406],"is_not":false,"summary":null,"term":"GO:1990520"}],"molecular_function":[{"annotations":[99410],"is_not":false,"summary":null,"term":"GO:0004866"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVP5","EnsemblGenomes-Gn:SJAG_00460","EnsemblGenomes-Tr:EEB05446"],"deletion_viability":"unknown","disordered_region_coords":[[7,52],[56,64],[73,82],[86,137],[164,179],[183,183],[198,202],[212,218],[236,341]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"},{"name":"dre2","uniquename":"SJAG_00455"}],"genes_by_uniquename":{"HGNC:13422":null,"HGNC:9690":null,"HGNC:9691":null,"SJAG_00460":null,"SPBC14C8.01c":null,"YDR113C":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3303933,"start_pos":3302875,"strand":"reverse"},"low_complexity_region_coords":[[184,197],[198,209],[221,235]],"name":"cut2","ortholog_annotations":[{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13422","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9690","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9691","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC14C8.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00460","ortholog_taxonid":4932,"ortholog_uniquename":"YDR113C","reference_uniquename":"PMID:29761456"}],"product":"sister chromatid separation inhibitor, securin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0015630","GO:0030234","GO:0000070","GO:0140013","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004866":null,"GO:0005634":null,"GO:0005737":null,"GO:0006974":null,"GO:0072687":null,"GO:0140013":null,"GO:1990520":null,"GO:2000816":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00460.1"],"transcripts_by_uniquename":{"SJAG_00460.1":null},"uniprot_identifier":"B6JVP5","uniquename":"SJAG_00460"}


id: SJAG_00461
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101577],"is_not":false,"summary":null,"term":"GO:0061621"}],"cellular_component":[{"annotations":[101568],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101571],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101574],"is_not":false,"summary":null,"term":"GO:0000015"}],"molecular_function":[{"annotations":[101580],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[101583],"is_not":false,"summary":null,"term":"GO:0004634"}]},"dbxrefs":["InterPro:IPR020811","InterPro:IPR000941","EnsemblGenomes-Gn:SJAG_00461","InterPro:IPR020809","GOA:B6JVP6","InterPro:IPR029017","InterPro:IPR020810","UniProtKB/TrEMBL:B6JVP6","EnsemblGenomes-Tr:EEB05447","InterPro:IPR036849"],"deletion_viability":"unknown","disordered_region_coords":[[22,23],[210,216]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"},{"name":"red5","uniquename":"SJAG_00456"}],"genes_by_uniquename":{"HGNC:3350":null,"HGNC:3353":null,"HGNC:3354":null,"SJAG_00461":null,"SPBC1815.01":null,"YGR254W":null,"YHR174W":null,"YMR323W":null,"YOR393W":null,"YPL281C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.120","interpro_id":"IPR036849","interpro_name":"Enolase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":439,"score":0.0,"start":128}],"model":"3otrF02","name":"Enolase-like C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.390.10","interpro_id":"IPR029017","interpro_name":"Enolase-like, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":127,"score":0.0,"start":1}],"model":"5wroA01","name":"Enolase-like, N-terminal domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00318","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":419,"score":0.0,"start":1}],"model":"MF_00318","name":"Enolase [eno]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00113","interpro_id":"IPR020810","interpro_name":"Enolase, C-terminal TIM barrel domain","interpro_type":"Domain","locations":[{"end":432,"score":0.0,"start":144}],"model":"PF00113","name":"Enolase, C-terminal TIM barrel domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03952","interpro_id":"IPR020811","interpro_name":"Enolase, N-terminal","interpro_type":"Domain","locations":[{"end":134,"score":0.0,"start":3}],"model":"PF03952","name":"Enolase, N-terminal domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001400","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":433,"score":0.0,"start":1}],"model":"PIRSF001400","name":"Enolase"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00148","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":49,"score":0.0,"start":35},{"end":123,"score":0.0,"start":107},{"end":178,"score":0.0,"start":165},{"end":330,"score":0.0,"start":319},{"end":356,"score":0.0,"start":342},{"end":388,"score":0.0,"start":371}],"model":"PR00148","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00164","interpro_id":"IPR020809","interpro_name":"Enolase, conserved site","interpro_type":"Conserved_site","locations":[{"end":355,"score":0.0,"start":342}],"model":"PS00164","name":"Enolase signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11902","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":431,"score":0.0,"start":1}],"model":"PTHR11902:SF1","name":"ENOLASE"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDF00002","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":419,"score":0.0,"start":3}],"model":"SFLDF00002","name":"enolase"},{"dbname":"SFLD","evidence":"HMMPfam","id":"SFLDG00178","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":419,"score":0.0,"start":3}],"model":"SFLDG00178","name":"enolase"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01192","interpro_id":"IPR020810","interpro_name":"Enolase, C-terminal TIM barrel domain","interpro_type":"Domain","locations":[{"end":433,"score":0.0,"start":143}],"model":"SM01192","name":"Enolase, C-terminal TIM barrel domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01193","interpro_id":"IPR020811","interpro_name":"Enolase, N-terminal","interpro_type":"Domain","locations":[{"end":134,"score":0.0,"start":3}],"model":"SM01193","name":"Enolase, N-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51604","interpro_id":"IPR036849","interpro_name":"Enolase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":431,"score":0.0,"start":144}],"model":"0041937","name":"Enolase C-terminal domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54826","interpro_id":"IPR029017","interpro_name":"Enolase-like, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":138,"score":0.0,"start":3}],"model":"0048743","name":"Enolase N-terminal domain-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01060","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":431,"score":0.0,"start":3}],"model":"TIGR01060","name":"phosphopyruvate hydratase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03313","interpro_id":"IPR000941","interpro_name":"Enolase","interpro_type":"Family","locations":[{"end":417,"score":0.0,"start":5}],"model":"cd03313","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3302528,"start_pos":3301203,"strand":"forward"},"low_complexity_region_coords":[[117,124],[435,440]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3350","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3353","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1815.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YGR254W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YHR174W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YMR323W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YOR393W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00461","ortholog_taxonid":4932,"ortholog_uniquename":"YPL281C","reference_uniquename":"PMID:29761456"}],"product":"enolase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055086","GO:0016829","GO:0006091","GO:0005829","GO:0005975","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000015":null,"GO:0000287":null,"GO:0004634":null,"GO:0005634":null,"GO:0005829":null,"GO:0061621":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00461.1"],"transcripts_by_uniquename":{"SJAG_00461.1":null},"uniprot_identifier":"B6JVP6","uniquename":"SJAG_00461"}


id: SJAG_00462
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101565],"is_not":false,"summary":null,"term":"GO:0140053"}],"cellular_component":[{"annotations":[101564],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00462","EnsemblGenomes-Tr:EEB05448","UniProtKB/TrEMBL:B6JVP7"],"deletion_viability":"unknown","disordered_region_coords":[[106,109],[145,149],[198,200],[203,208],[211,212],[237,246]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"},{"name":"gtr1","uniquename":"SJAG_00457"}],"genes_by_uniquename":{"SJAG_00462":null,"SPBC17G9.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF20263","interpro_id":"IPR046896","interpro_name":"LYR motif-containing protein Cup1-like, N-terminal domain","interpro_type":"Domain","locations":[{"end":90,"score":7.200000323758307e-30,"start":3}],"model":"PF20263","name":"LYR motif-containing protein 2-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3299682,"start_pos":3298884,"strand":"reverse"},"name":"cup1","ortholog_annotations":[{"gene_uniquename":"SJAG_00462","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.13c","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial LYR family protein Cup1/Lyr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0140053":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00462.1"],"transcripts_by_uniquename":{"SJAG_00462.1":null},"uniprot_identifier":"B6JVP7","uniquename":"SJAG_00462"}


id: SJAG_00463
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[101561],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101562],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[101563],"is_not":false,"summary":null,"term":"GO:0016787"}]},"dbxrefs":["InterPro:IPR036412","InterPro:IPR023214","EnsemblGenomes-Gn:SJAG_00463","EnsemblGenomes-Tr:EEB05449","UniProtKB/TrEMBL:B6JVP8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"},{"name":"rpb4","uniquename":"SJAG_00458"}],"genes_by_uniquename":{"SJAG_00463":null,"SPBC17G9.12c":null,"YCR015C":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1000","interpro_id":"IPR023214","interpro_name":"HAD superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":236,"score":5.799999872808698e-17,"start":2}],"model":"5is2A03","name":"HAD superfamily/HAD-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28181","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":285,"score":0.0,"start":2}],"model":"PTHR28181:SF1","name":"UPF0655 PROTEIN YCR015C"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56784","interpro_id":"IPR036412","interpro_name":"HAD-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":222,"score":4.369999845386767e-14,"start":2}],"model":"0052665","name":"HAD-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3298646,"start_pos":3297670,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00463","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00463","ortholog_taxonid":4932,"ortholog_uniquename":"YCR015C","reference_uniquename":"PMID:29761456"}],"product":"HAD superfamily hydrolase, unknown role","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016787":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00463.1"],"transcripts_by_uniquename":{"SJAG_00463.1":null},"uniprot_identifier":"B6JVP8","uniquename":"SJAG_00463"}


id: SJAG_00464
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101556],"is_not":false,"summary":null,"term":"GO:0006091"},{"annotations":[101557],"is_not":false,"summary":null,"term":"GO:0006090"}],"cellular_component":[{"annotations":[101555],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[101558],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[101559],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[101560],"is_not":false,"summary":null,"term":"GO:0004736"}]},"dbxrefs":["InterPro:IPR000089","InterPro:IPR001882","InterPro:IPR011053","EnsemblGenomes-Tr:EEB05450","InterPro:IPR013785","InterPro:IPR011761","InterPro:IPR003379","EnsemblGenomes-Gn:SJAG_00464","InterPro:IPR005930","InterPro:IPR005479","InterPro:IPR011054","InterPro:IPR011764","InterPro:IPR016185","GOA:B6JVP9","InterPro:IPR005481","InterPro:IPR005482","UniProtKB/TrEMBL:B6JVP9","InterPro:IPR000891"],"deletion_viability":"unknown","disordered_region_coords":[[520,524],[861,862],[864,866],[973,974],[977,979],[981,982],[1092,1113],[1164,1166]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"},{"name":"coq7","uniquename":"SJAG_00459"}],"genes_by_uniquename":{"HGNC:8636":null,"SJAG_00464":null,"SPBC17G9.11c":null,"YBR218C":null,"YGL062W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1183,"score":8.399999809161036e-23,"start":1105}],"model":"3hblD06","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.70","interpro_id":"IPR013785","interpro_name":"Aldolase-type TIM barrel","interpro_type":"Homologous_superfamily","locations":[{"end":1043,"score":0.0,"start":525}],"model":"4qslD03","name":"Aldolase class I"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.470.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":485,"score":0.0,"start":19}],"model":"3tw6C01","name":"ATP-grasp fold, B domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00289","interpro_id":"IPR005481","interpro_name":"Biotin carboxylase-like, N-terminal domain","interpro_type":"Domain","locations":[{"end":141,"score":2.199996550036033e-40,"start":30}],"model":"PF00289","name":"Biotin carboxylase, N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00364","interpro_id":"IPR000089","interpro_name":"Biotin/lipoyl attachment","interpro_type":"Domain","locations":[{"end":1180,"score":4.099999961933165e-14,"start":1116}],"model":"PF00364","name":"Biotin-requiring enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00682","interpro_id":"IPR000891","interpro_name":"Pyruvate carboxyltransferase","interpro_type":"Domain","locations":[{"end":840,"score":5.800000211948205e-25,"start":572}],"model":"PF00682","name":"HMGL-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02436","interpro_id":"IPR003379","interpro_name":"Carboxylase, conserved domain","interpro_type":"Domain","locations":[{"end":1064,"score":0.0,"start":864}],"model":"PF02436","name":"Conserved carboxylase domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02785","interpro_id":"IPR005482","interpro_name":"Biotin carboxylase, C-terminal","interpro_type":"Domain","locations":[{"end":477,"score":2.8000000841106536e-30,"start":370}],"model":"PF02785","name":"Biotin carboxylase C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02786","interpro_id":"IPR005479","interpro_name":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_type":"Domain","locations":[{"end":354,"score":0.0,"start":146}],"model":"PF02786","name":"Carbamoyl-phosphate synthase L chain, ATP binding domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001594","interpro_id":"IPR005930","interpro_name":"Pyruvate carboxylase","interpro_type":"Family","locations":[{"end":1183,"score":0.0,"start":26}],"model":"PIRSF001594","name":"Pyruvate carboxylase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00188","interpro_id":"IPR001882","interpro_name":"Biotin-binding site","interpro_type":"Binding_site","locations":[{"end":1155,"score":0.0,"start":1138}],"model":"PS00188","name":"Biotin-requiring enzymes attachment site"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00866","interpro_id":"IPR005479","interpro_name":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_type":"Domain","locations":[{"end":198,"score":0.0,"start":184}],"model":"PS00866","name":"Carbamoyl-phosphate synthase subdomain signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00867","interpro_id":"IPR005479","interpro_name":"Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain","interpro_type":"Domain","locations":[{"end":324,"score":0.0,"start":317}],"model":"PS00867","name":"Carbamoyl-phosphate synthase subdomain signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50968","interpro_id":"IPR000089","interpro_name":"Biotin/lipoyl attachment","interpro_type":"Domain","locations":[{"end":1182,"score":0.0,"start":1107}],"model":"PS50968","name":"Biotinyl/lipoyl domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50975","interpro_id":"IPR011761","interpro_name":"ATP-grasp fold","interpro_type":"Domain","locations":[{"end":348,"score":0.0,"start":151}],"model":"PS50975","name":"ATP-grasp fold profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50979","interpro_id":"IPR011764","interpro_name":"Biotin carboxylation domain","interpro_type":"Domain","locations":[{"end":481,"score":0.0,"start":29}],"model":"PS50979","name":"Biotin carboxylation domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50991","interpro_id":"IPR000891","interpro_name":"Pyruvate carboxyltransferase","interpro_type":"Domain","locations":[{"end":837,"score":0.0,"start":569}],"model":"PS50991","name":"Pyruvate carboxyltransferase domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43778","interpro_id":"IPR005930","interpro_name":"Pyruvate carboxylase","interpro_type":"Family","locations":[{"end":1182,"score":0.0,"start":19}],"model":"PTHR43778:SF2","name":"PYRUVATE CARBOXYLASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00878","interpro_id":"IPR005482","interpro_name":"Biotin carboxylase, C-terminal","interpro_type":"Domain","locations":[{"end":477,"score":0.0,"start":370}],"model":"SM00878","name":"Biotin carboxylase C-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51230","interpro_id":"IPR011053","interpro_name":"Single hybrid motif","interpro_type":"Homologous_superfamily","locations":[{"end":1182,"score":2.489999966217591e-18,"start":1103}],"model":"0048508","name":"Single hybrid motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51246","interpro_id":"IPR011054","interpro_name":"Rudiment single hybrid motif","interpro_type":"Homologous_superfamily","locations":[{"end":483,"score":1.150000027877534e-35,"start":365}],"model":"0044432","name":"Rudiment single hybrid motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51569","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":872,"score":0.0,"start":570}],"model":"0043346","name":"Aldolase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52440","interpro_id":"IPR016185","interpro_name":"Pre-ATP-grasp domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":144,"score":7.910049571420727e-41,"start":27}],"model":"0050407","name":"PreATP-grasp domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56059","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":382,"score":0.0,"start":114}],"model":"0050408","name":"Glutathione synthetase ATP-binding domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF89000","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1042,"score":0.0,"start":869}],"model":"0049233","name":"post-HMGL domain-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01235","interpro_id":"IPR005930","interpro_name":"Pyruvate carboxylase","interpro_type":"Family","locations":[{"end":1182,"score":0.0,"start":32}],"model":"TIGR01235","name":"pyruvate carboxylase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1181,"score":3.836639843127409e-23,"start":1115}],"model":"cd06850","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07937","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":853,"score":0.0,"start":571}],"model":"cd07937","name":"Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3297063,"start_pos":3293509,"strand":"reverse"},"low_complexity_region_coords":[[158,169],[192,203]],"name":"pyr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00464","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8636","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YBR218C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00464","ortholog_taxonid":4932,"ortholog_uniquename":"YGL062W","reference_uniquename":"PMID:29761456"}],"product":"pyruvate carboxylase Pyr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006091","GO:0016874","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004736":null,"GO:0005524":null,"GO:0005829":null,"GO:0006090":null,"GO:0006091":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00464.1"],"transcripts_by_uniquename":{"SJAG_00464.1":null},"uniprot_identifier":"B6JVP9","uniquename":"SJAG_00464"}


id: SJAG_00465
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91045,101548],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[91047,101550],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[91039,101542],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91041,101544],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[91043,101546],"is_not":false,"summary":null,"term":"GO:0022627"}],"molecular_function":[{"annotations":[91049,101552],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[91051,101554],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6JVQ0","UniProtKB/TrEMBL:B6JVQ0","InterPro:IPR031309","InterPro:IPR020929","InterPro:IPR002132","InterPro:IPR031310","EnsemblGenomes-Gn:SJAG_00465","InterPro:IPR022803","EnsemblGenomes-Tr:EEB05451"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[141,144],[147,148]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"},{"name":"cut2","uniquename":"SJAG_00460"}],"genes_by_uniquename":{"HGNC:10301":null,"SJAG_00465":null,"SPAC26A3.07c":null,"SPBC17G9.10":null,"YGR085C":null,"YPR102C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1440.10","interpro_id":"IPR022803","interpro_name":"Ribosomal protein L5 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":174,"score":0.0,"start":2}],"model":"1vwxJ00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00281","interpro_id":"IPR031310","interpro_name":"Ribosomal protein L5, N-terminal","interpro_type":"Domain","locations":[{"end":60,"score":2.399999923837254e-19,"start":7}],"model":"PF00281","name":"Ribosomal protein L5"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00673","interpro_id":"IPR031309","interpro_name":"Ribosomal protein L5, C-terminal","interpro_type":"Domain","locations":[{"end":140,"score":1.2999999587451793e-21,"start":64}],"model":"PF00673","name":"ribosomal L5P family C-terminus"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF002161","interpro_id":"IPR002132","interpro_name":"Ribosomal protein L5","interpro_type":"Family","locations":[{"end":171,"score":3.3999704639913037e-41,"start":1}],"model":"PIRSF002161","name":"Ribosomal protein, L5p/L5a/L11e/organellar L5 types"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00358","interpro_id":"IPR020929","interpro_name":"Ribosomal protein L5, conserved site","interpro_type":"Conserved_site","locations":[{"end":53,"score":0.0,"start":37}],"model":"PS00358","name":"Ribosomal protein L5 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11994","interpro_id":"IPR002132","interpro_name":"Ribosomal protein L5","interpro_type":"Family","locations":[{"end":174,"score":0.0,"start":3}],"model":"PTHR11994:SF8","name":"60S RIBOSOMAL PROTEIN L11-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55282","interpro_id":"IPR022803","interpro_name":"Ribosomal protein L5 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":171,"score":0.0,"start":7}],"model":"0037532","name":"RL5-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3293165,"start_pos":3292641,"strand":"forward"},"name":"rpl11b","ortholog_annotations":[{"gene_uniquename":"SJAG_00465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10301","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26A3.07c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YGR085C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00465","ortholog_taxonid":4932,"ortholog_uniquename":"YPR102C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0022626","GO:0005829","GO:0042254","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005829":null,"GO:0019843":null,"GO:0022625":null,"GO:0022627":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00465.1"],"transcripts_by_uniquename":{"SJAG_00465.1":null},"uniprot_identifier":"B6JVQ0","uniquename":"SJAG_00465"}


id: SJAG_00466
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101536],"is_not":false,"summary":null,"term":"GO:0001731"}],"cellular_component":[{"annotations":[101533],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[101534],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101535],"is_not":false,"summary":null,"term":"GO:0005850"}],"molecular_function":[{"annotations":[101537],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[101538],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[101539],"is_not":false,"summary":null,"term":"GO:1990856"},{"annotations":[101540],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["InterPro:IPR009001","InterPro:IPR009000","EnsemblGenomes-Gn:SJAG_00466","GOA:B6JVQ1","InterPro:IPR004161","InterPro:IPR015256","InterPro:IPR027417","UniProtKB/TrEMBL:B6JVQ1","InterPro:IPR000795","EnsemblGenomes-Tr:EEB05452"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"},{"uniquename":"SJAG_00461"}],"genes_by_uniquename":{"HGNC:3267":null,"SJAG_00466":null,"SPBC17G9.09":null,"YER025W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":346,"score":0.0,"start":231},{"end":446,"score":1.9000000055061755e-36,"start":347}],"model":"3j81k02","name":"Translation factors"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":230,"score":0.0,"start":21}],"model":"3j81k01","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00009","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":226,"score":9.500000077175699e-23,"start":23}],"model":"PF00009","name":"Elongation factor Tu GTP binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03144","interpro_id":"IPR004161","interpro_name":"Translation elongation factor EFTu-like, domain 2","interpro_type":"Domain","locations":[{"end":340,"score":1.399999994405876e-11,"start":258}],"model":"PF03144","name":"Elongation factor Tu domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09173","interpro_id":"IPR015256","interpro_name":"Initiation factor eIF2 gamma, C-terminal","interpro_type":"Domain","locations":[{"end":440,"score":1.6999999301591922e-32,"start":351}],"model":"PF09173","name":"Initiation factor eIF2 gamma, C terminal"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00315","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":38,"score":3.29999985670959e-11,"start":25},{"end":123,"score":3.29999985670959e-11,"start":113},{"end":140,"score":3.29999985670959e-11,"start":129},{"end":176,"score":3.29999985670959e-11,"start":167}],"model":"PR00315","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51722","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":229,"score":0.0,"start":21}],"model":"PS51722","name":"Translational (tr)-type guanine nucleotide-binding (G) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42854","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":447,"score":0.0,"start":3}],"model":"PTHR42854:SF3","name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50447","interpro_id":"IPR009000","interpro_name":"Translation protein, beta-barrel domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":344,"score":6.830000013185023e-37,"start":230}],"model":"0051767","name":"Translation proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50465","interpro_id":"IPR009001","interpro_name":"Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":440,"score":1.250000003963846e-30,"start":345}],"model":"0051768","name":"EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":234,"score":1.1200018105962533e-40,"start":20}],"model":"0043133","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01888","interpro_id":"IPR044128","interpro_name":"Initiation factor eIF2 gamma, GTP-binding domain","interpro_type":"Domain","locations":[{"end":230,"score":0.0,"start":24}],"model":"cd01888","name":"Gamma subunit of initiation factor 2 (eIF2 gamma)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03688","interpro_id":"IPR044127","interpro_name":"Initiation factor eIF2 gamma, domain 2","interpro_type":"Domain","locations":[{"end":344,"score":0.0,"start":231}],"model":"cd03688","name":"Domain II of the gamma subunit of eukaryotic translation initiation factor 2"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd15490","interpro_id":"IPR015256","interpro_name":"Initiation factor eIF2 gamma, C-terminal","interpro_type":"Domain","locations":[{"end":440,"score":0.0,"start":347}],"model":"cd15490","name":"Domain III of eukaryotic initiation factor eIF2 gamma"}],"location":{"chromosome_name":"supercont5.1","end_pos":3292244,"start_pos":3290898,"strand":"forward"},"name":"tif213","ortholog_annotations":[{"gene_uniquename":"SJAG_00466","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3267","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00466","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00466","ortholog_taxonid":4932,"ortholog_uniquename":"YER025W","reference_uniquename":"PMID:29761456"}],"product":"translation initiation factor eIF2 gamma subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005829","GO:0045182","GO:0003924","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001731":null,"GO:0003743":null,"GO:0003924":null,"GO:0005525":null,"GO:0005737":null,"GO:0005829":null,"GO:0005850":null,"GO:1990856":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00466.1"],"transcripts_by_uniquename":{"SJAG_00466.1":null},"uniprot_identifier":"B6JVQ1","uniquename":"SJAG_00466"}


id: SJAG_00467
data:
  {"coiled_coil_coords":[[133,153]],"cv_annotations":{"biological_process":[{"annotations":[101530],"is_not":false,"summary":null,"term":"GO:0016192"}],"cellular_component":[{"annotations":[101528],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101529],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[101531],"is_not":false,"summary":null,"term":"GO:0005096"},{"annotations":[101532],"is_not":false,"summary":null,"term":"GO:0005543"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00467","InterPro:IPR027267","UniProtKB/TrEMBL:B6JVQ2","EnsemblGenomes-Tr:EEB05453","GOA:B6JVQ2","InterPro:IPR037278","InterPro:IPR001164","InterPro:IPR001849","InterPro:IPR011993","InterPro:IPR038508"],"deletion_viability":"unknown","disordered_region_coords":[[1,12],[14,16],[24,34],[38,45],[59,63],[266,268],[413,420],[424,428],[434,448],[667,694]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"},{"name":"cup1","uniquename":"SJAG_00462"}],"genes_by_uniquename":{"HGNC:16467":null,"HGNC:16469":null,"HGNC:16754":null,"SJAG_00467":null,"SPBC17G9.08c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.220.150","interpro_id":"IPR038508","interpro_name":"ArfGAP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":579,"score":1.2000000341586456e-37,"start":443}],"model":"3ljuX01","name":"Arf GTPase activating protein"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1270.60","interpro_id":"IPR027267","interpro_name":"AH/BAR domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":271,"score":8.899999674139923e-39,"start":34}],"model":"2z0oA01","name":"Arfaptin homology (AH) domain/BAR domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":403,"score":8.499999730256942e-21,"start":282}],"model":"2q13A02","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00169","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":396,"score":4.200000069953802e-10,"start":297}],"model":"PF00169","name":"PH domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01412","interpro_id":"IPR001164","interpro_name":"Arf GTPase activating protein","interpro_type":"Domain","locations":[{"end":576,"score":2.000000047484456e-33,"start":469}],"model":"PF01412","name":"Putative GTPase activating protein for Arf"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16746","interpro_id":"IPR004148","interpro_name":"BAR domain","interpro_type":"Domain","locations":[{"end":257,"score":5.800000084566935e-15,"start":36}],"model":"PF16746","name":"BAR domain of APPL family"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00405","interpro_id":"IPR001164","interpro_name":"Arf GTPase activating protein","interpro_type":"Domain","locations":[{"end":509,"score":5.900000044078979e-9,"start":492},{"end":534,"score":5.900000044078979e-9,"start":513}],"model":"PR00405","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50003","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":397,"score":0.0,"start":293}],"model":"PS50003","name":"PH domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50115","interpro_id":"IPR001164","interpro_name":"Arf GTPase activating protein","interpro_type":"Domain","locations":[{"end":582,"score":0.0,"start":459}],"model":"PS50115","name":"ARF GTPase-activating proteins domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23180","interpro_id":"IPR045258","interpro_name":"ArfGAP ACAP1/2/3-like","interpro_type":"Family","locations":[{"end":622,"score":0.0,"start":33}],"model":"PTHR23180:SF409","name":"CENTAURIN/ARF"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00105","interpro_id":"IPR001164","interpro_name":"Arf GTPase activating protein","interpro_type":"Domain","locations":[{"end":582,"score":7.900000041774751e-36,"start":448}],"model":"SM00105","name":"Putative GTP-ase activating proteins for the small GTPase, ARF"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00233","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":399,"score":2.099999997029825e-14,"start":294}],"model":"SM00233","name":"Pleckstrin homology domain."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103657","interpro_id":"IPR027267","interpro_name":"AH/BAR domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":306,"score":1.2191296639625909e-43,"start":36}],"model":"0053888","name":"BAR/IMD domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":397,"score":4.290000025417805e-20,"start":293}],"model":"0049788","name":"PH domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57863","interpro_id":"IPR037278","interpro_name":"ARFGAP/RecO-like zinc finger","interpro_type":"Homologous_superfamily","locations":[{"end":577,"score":4.8400001847073606e-34,"start":469}],"model":"0036355","name":"ArfGap/RecO-like zinc finger"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07608","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":238,"score":0.0,"start":43}],"model":"cd07608","name":"The Bin/Amphiphysin/Rvs (BAR) domain of uncharacterized fungal Arf GAP proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd08204","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":569,"score":0.0,"start":470}],"model":"cd08204","name":"GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3289461,"start_pos":3287377,"strand":"reverse"},"low_complexity_region_coords":[[262,277],[398,401],[421,433],[449,459]],"name":"cnt5","ortholog_annotations":[{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16469","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16754","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00467","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.08c","reference_uniquename":"PMID:21511999"}],"product":"centaurin Cnt5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0008289","GO:0030234","GO:0005829","GO:0016192","GO:0098772","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005543":null,"GO:0005829":null,"GO:0005886":null,"GO:0016192":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00467.1"],"transcripts_by_uniquename":{"SJAG_00467.1":null},"uniprot_identifier":"B6JVQ2","uniquename":"SJAG_00467"}


id: SJAG_00468
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86727,101523],"is_not":false,"summary":null,"term":"GO:0002182"},{"annotations":[86729,101525],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[86723,101517],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86725,101519],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[101521],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[86731,101527],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR001976","UniProtKB/TrEMBL:B6JVQ3","InterPro:IPR018098","GOA:B6JVQ3","EnsemblGenomes-Gn:SJAG_00468","InterPro:IPR012678","EnsemblGenomes-Tr:EEB05454"],"deletion_viability":"unknown","disordered_region_coords":[[87,88],[118,132],[104,104]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"},{"uniquename":"SJAG_00463"}],"genes_by_uniquename":{"HGNC:10411":null,"SJAG_00468":null,"SPAC17G6.06":null,"SPBC17G9.07":null,"YER074W":null,"YIL069C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.3370","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":132,"score":0.0,"start":1}],"model":"6faiY00","name":""},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00545","interpro_id":"IPR001976","interpro_name":"Ribosomal protein S24e","interpro_type":"Family","locations":[{"end":105,"score":0.0,"start":3}],"model":"MF_00545","name":"30S ribosomal protein S24e [rps24e]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01282","interpro_id":"IPR001976","interpro_name":"Ribosomal protein S24e","interpro_type":"Family","locations":[{"end":101,"score":1.6999999301591922e-32,"start":24}],"model":"PF01282","name":"Ribosomal protein S24e"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00529","interpro_id":"IPR018098","interpro_name":"Ribosomal S24e conserved site","interpro_type":"Conserved_site","locations":[{"end":86,"score":0.0,"start":64}],"model":"PS00529","name":"Ribosomal protein S24e signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10496","interpro_id":"IPR001976","interpro_name":"Ribosomal protein S24e","interpro_type":"Family","locations":[{"end":127,"score":0.0,"start":1}],"model":"PTHR10496:SF0","name":"40S RIBOSOMAL PROTEIN S24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54189","interpro_id":"IPR012678","interpro_name":"Ribosomal protein L23/L15e core domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":105,"score":2.1899999289359144e-35,"start":5}],"model":"0051035","name":"Ribosomal proteins S24e, L23 and L15e"}],"location":{"chromosome_name":"supercont5.1","end_pos":3286852,"start_pos":3286397,"strand":"forward"},"low_complexity_region_coords":[[105,117]],"name":"rps24b","ortholog_annotations":[{"gene_uniquename":"SJAG_00468","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10411","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G6.06","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YER074W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00468","ortholog_taxonid":4932,"ortholog_uniquename":"YIL069C","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S24","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022626","GO:0005634","GO:0005730","GO:0005198","GO:0002181","GO:0042254","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0003735":null,"GO:0005730":null,"GO:0005829":null,"GO:0006364":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00468.1"],"transcripts_by_uniquename":{"SJAG_00468.1":null},"uniprot_identifier":"B6JVQ3","uniquename":"SJAG_00468"}


id: SJAG_00469
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101514],"is_not":false,"summary":null,"term":"GO:0019290"}],"cellular_component":[{"annotations":[101512],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101513],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[101515],"is_not":false,"summary":null,"term":"GO:0016410"}]},"dbxrefs":["InterPro:IPR016181","EnsemblGenomes-Gn:SJAG_00469","UniProtKB/TrEMBL:B6JVQ4","EnsemblGenomes-Tr:EEB05455","InterPro:IPR019432"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"},{"name":"pyr1","uniquename":"SJAG_00464"}],"genes_by_uniquename":{"SJAG_00469":null,"SPBC17G9.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":320,"score":0.0,"start":124}],"model":"1yk3B00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13523","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":305,"score":1.5414283107572988e-44,"start":160}],"model":"PF13523","name":"Acetyltransferase (GNAT) domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31438","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":327,"score":0.0,"start":26}],"model":"PTHR31438:SF1","name":"LYSINE N-ACYLTRANSFERASE C17G9.06C-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01006","interpro_id":"IPR019432","interpro_name":"Acyltransferase MbtK/IucB-like, conserved domain","interpro_type":"Domain","locations":[{"end":204,"score":1.199999978942004e-13,"start":157}],"model":"SM01006","name":"Siderophore biosynthesis protein domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55729","interpro_id":"IPR016181","interpro_name":"Acyl-CoA N-acyltransferase","interpro_type":"Homologous_superfamily","locations":[{"end":318,"score":0.0,"start":130}],"model":"0051326","name":"Acyl-CoA N-acyltransferases (Nat)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3285192,"start_pos":3284191,"strand":"reverse"},"name":"sib3","ortholog_annotations":[{"gene_uniquename":"SJAG_00469","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.06c","reference_uniquename":"PMID:21511999"}],"product":"siderophore-iron biosynthesis protein Sib3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0016746","GO:0005634","GO:0019748","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0016410":null,"GO:0019290":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00469.1"],"transcripts_by_uniquename":{"SJAG_00469.1":null},"uniprot_identifier":"B6JVQ4","uniquename":"SJAG_00469"}


id: SJAG_00470
data:
  {"coiled_coil_coords":[[211,231]],"cv_annotations":{"biological_process":[{"annotations":[101509],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[101507],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[101508],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[101510],"is_not":false,"summary":null,"term":"GO:0003755"},{"annotations":[101511],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["GOA:B6JVQ5","InterPro:IPR012677","EnsemblGenomes-Tr:EEB05456","UniProtKB/TrEMBL:B6JVQ5","EnsemblGenomes-Gn:SJAG_00470","InterPro:IPR029000","InterPro:IPR000504","InterPro:IPR035542","InterPro:IPR035979","InterPro:IPR035538","InterPro:IPR002130"],"deletion_viability":"unknown","disordered_region_coords":[[96,98],[176,189],[191,203],[205,206],[208,210],[417,416],[328,353],[376,381],[399,405]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"},{"name":"rpl11b","uniquename":"SJAG_00465"}],"genes_by_uniquename":{"HGNC:15702":null,"SJAG_00470":null,"SPBC17G9.05":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.100.10","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":182,"score":3.2229864679470793e-44,"start":1}],"model":"3bkpA00","name":"Cyclophilin-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":331,"score":2.400000096203362e-25,"start":198}],"model":"1hl6C00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":318,"score":2.8000000207448943e-16,"start":248}],"model":"PF00076","name":"RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00160","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_type":"Domain","locations":[{"end":167,"score":2.1999999420303062e-33,"start":3}],"model":"PF00160","name":"Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00153","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_type":"Domain","locations":[{"end":31,"score":0.00003400000059627928,"start":16},{"end":54,"score":0.00003400000059627928,"start":42},{"end":144,"score":0.00003400000059627928,"start":129}],"model":"PR00153","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50072","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_type":"Domain","locations":[{"end":169,"score":0.0,"start":6}],"model":"PS50072","name":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":324,"score":0.0,"start":246}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45843","interpro_id":"IPR035542","interpro_name":"Cyclophilin-RNA interacting protein","interpro_type":"Family","locations":[{"end":408,"score":0.0,"start":1}],"model":"PTHR45843:SF1","name":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":320,"score":6.299999800072792e-21,"start":247}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50891","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":190,"score":2.6302372175376816e-42,"start":1}],"model":"0051587","name":"Cyclophilin-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":350,"score":2.4200000678593167e-28,"start":229}],"model":"0047108","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01921","interpro_id":"IPR035538","interpro_name":"PPIL4-like, cyclophilin domain","interpro_type":"Domain","locations":[{"end":177,"score":0.0,"start":4}],"model":"cd01921","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12235","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":325,"score":0.0,"start":243}],"model":"cd12235","name":"RNA recognition motif (RRM) found in peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3284118,"start_pos":3282868,"strand":"forward"},"low_complexity_region_coords":[[216,231],[354,375],[382,398],[406,416]],"name":"rct1","ortholog_annotations":[{"gene_uniquename":"SJAG_00470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15702","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00470","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.05","reference_uniquename":"PMID:21511999"}],"product":"cyclophilin family peptidyl-prolyl cis-trans isomerase, RRM-containing Rct1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005694","GO:0140096","GO:0006355","GO:0006351","GO:0016853"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003723":null,"GO:0003755":null,"GO:0005634":null,"GO:0006357":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00470.1"],"transcripts_by_uniquename":{"SJAG_00470.1":null},"uniprot_identifier":"B6JVQ5","uniquename":"SJAG_00470"}


id: SJAG_00471
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101502],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[101503],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[101504],"is_not":false,"summary":null,"term":"GO:0000054"}],"cellular_component":[{"annotations":[101492],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101493],"is_not":false,"summary":null,"term":"GO:0000791"},{"annotations":[101494],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[101495],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[59932],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[101496],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[101497,115581],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[101498],"is_not":false,"summary":null,"term":"GO:0031080"},{"annotations":[101499],"is_not":false,"summary":null,"term":"GO:0140602"},{"annotations":[101500],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[101501],"is_not":true,"summary":null,"term":"GO:0044732"}],"molecular_function":[{"annotations":[101505],"is_not":false,"summary":null,"term":"GO:1990188"},{"annotations":[101506],"is_not":false,"summary":null,"term":"GO:0017056"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVQ6","GOA:B6JVQ6","EnsemblGenomes-Tr:EEB05457","EnsemblGenomes-Gn:SJAG_00471","InterPro:IPR011502"],"deletion_viability":"unknown","disordered_region_coords":[[1,6],[15,16],[199,200]],"feature_publications":[{"reference_uniquename":"PMID:21802294","source":"canto"},{"reference_uniquename":"PMID:28954740","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"},{"name":"tif213","uniquename":"SJAG_00466"}],"genes_by_uniquename":{"HGNC:8734":null,"SJAG_00471":null,"SJAG_04464":null,"SPBC17G9.04c":null,"YJR042W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07575","interpro_id":"IPR011502","interpro_name":"Nucleoporin Nup85-like","interpro_type":"Family","locations":[{"end":642,"score":0.0,"start":84}],"model":"PF07575","name":"Nup85 Nucleoporin"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13373","interpro_id":"IPR011502","interpro_name":"Nucleoporin Nup85-like","interpro_type":"Family","locations":[{"end":664,"score":0.0,"start":92}],"model":"PTHR13373:SF21","name":"FROUNT PROTEIN-RELATED"}],"location":{"chromosome_name":"supercont5.1","end_pos":3282346,"start_pos":3280328,"strand":"reverse"},"low_complexity_region_coords":[[531,544]],"name":"nup85","ortholog_annotations":[{"gene_uniquename":"SJAG_00471","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8734","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00471","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00471","ortholog_taxonid":4932,"ortholog_uniquename":"YJR042W","reference_uniquename":"PMID:29761456"}],"physical_interactions":[{"evidence":"Affinity Capture-Western","gene_uniquename":"SJAG_04464","interactor_uniquename":"SJAG_00471","reference_uniquename":"PMID:28954740","throughput":"low"}],"product":"nucleoporin Nup85","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:21802294":null,"PMID:28954740":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0015630","GO:0005643","GO:0042254","GO:0005634","GO:0034399","GO:0005198","GO:0005816","GO:0005694","GO:0006913"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000054":null,"GO:0000791":null,"GO:0000792":null,"GO:0005634":null,"GO:0005635":null,"GO:0005643":null,"GO:0005829":null,"GO:0006406":null,"GO:0006606":null,"GO:0017056":null,"GO:0031080":null,"GO:0031965":null,"GO:0034399":null,"GO:0044732":null,"GO:0140602":null,"GO:1990188":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00471.1"],"transcripts_by_uniquename":{"SJAG_00471.1":null},"uniprot_identifier":"B6JVQ6","uniquename":"SJAG_00471"}


id: SJAG_00472
data:
  {"coiled_coil_coords":[[733,753]],"cv_annotations":{"biological_process":[{"annotations":[102971],"is_not":false,"summary":null,"term":"GO:0010619"},{"annotations":[102972],"is_not":false,"summary":null,"term":"GO:0010515"}],"cellular_component":[{"annotations":[102966],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[102967],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[102968],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102969],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[102970],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVQ7","InterPro:IPR014770","EnsemblGenomes-Gn:SJAG_00472","EnsemblGenomes-Tr:EEB05458","InterPro:IPR014772"],"deletion_viability":"unknown","disordered_region_coords":[[1,11]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"},{"name":"cnt5","uniquename":"SJAG_00467"}],"genes_by_uniquename":{"SJAG_00472":null,"SPBC21C3.20c":null,"YOR296W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51259","interpro_id":"IPR014772","interpro_name":"Mammalian uncoordinated homology 13, domain 2","interpro_type":"Domain","locations":[{"end":1061,"score":0.0,"start":946}],"model":"PS51259","name":"Munc13-homology domain 2 (MHD2) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47263","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":908,"score":0.0,"start":13}],"model":"PTHR47263:SF2","name":"ADENYLATE CYCLASE ACTIVATION PROTEIN GIT1"}],"location":{"chromosome_name":"supercont5.1","end_pos":3280144,"start_pos":3276835,"strand":"forward"},"low_complexity_region_coords":[[187,201]],"name":"git1","ortholog_annotations":[{"gene_uniquename":"SJAG_00472","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.20c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00472","ortholog_taxonid":4932,"ortholog_uniquename":"YOR296W","reference_uniquename":"PMID:26896847"}],"product":"C2 domain protein Git1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null},"subset_termids":["GO:0005829","GO:0015630","GO:0005634","GO:0000747","GO:0005816","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0010515":null,"GO:0010619":null,"GO:0032153":null,"GO:0044732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00472.1"],"transcripts_by_uniquename":{"SJAG_00472.1":null},"uniprot_identifier":"B6JVQ7","uniquename":"SJAG_00472"}


id: SJAG_00473
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[66927],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05459","GOA:B6JVQ8","UniProtKB/TrEMBL:B6JVQ8","InterPro:IPR014720","EnsemblGenomes-Gn:SJAG_00473"],"deletion_viability":"unknown","disordered_region_coords":[[84,97],[112,116],[120,138]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"},{"name":"rps24b","uniquename":"SJAG_00468"}],"genes_by_uniquename":{"SJAG_00473":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":86,"score":1.999999987845058e-8,"start":8}],"model":"3llhB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00035","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":76,"score":1.500000053056283e-6,"start":14}],"model":"PF00035","name":"Double-stranded RNA binding motif"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50137","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":80,"score":0.0,"start":13}],"model":"PS50137","name":"Double stranded RNA-binding domain (dsRBD) profile"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00358","interpro_id":"IPR014720","interpro_name":"Double-stranded RNA-binding domain","interpro_type":"Domain","locations":[{"end":79,"score":0.0003100000030826777,"start":14}],"model":"SM00358","name":"Double-stranded RNA binding motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54768","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":91,"score":9.259999989019718e-10,"start":10}],"model":"0050561","name":"dsRNA-binding domain-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3276417,"start_pos":3275555,"strand":"reverse"},"product":"Ribonuclease III, endonuclease domain superfamily","references_by_uniquename":{"GO_REF:0000104":null},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00473.1"],"transcripts_by_uniquename":{"SJAG_00473.1":null},"uniprot_identifier":"B6JVQ8","uniquename":"SJAG_00473"}


id: SJAG_00474
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103069],"is_not":false,"summary":null,"term":"GO:0006376"}],"cellular_component":[{"annotations":[103065],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[103066],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103067],"is_not":false,"summary":null,"term":"GO:0005685"},{"annotations":[103068],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[103070],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00474","InterPro:IPR000504","GOA:B6JVQ9","InterPro:IPR035979","InterPro:IPR012677","UniProtKB/TrEMBL:B6JVQ9","EnsemblGenomes-Tr:EEB05460"],"deletion_viability":"unknown","disordered_region_coords":[[1,65],[69,73],[77,96],[386,393],[402,405],[422,426],[473,476],[428,458]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"},{"name":"sib3","uniquename":"SJAG_00469"}],"genes_by_uniquename":{"HGNC:30813":null,"SJAG_00474":null,"SPBC23E6.01c":null,"YBR212W":null,"YHR086W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":176,"score":9.999999682655225e-22,"start":97},{"end":279,"score":1.9000000154351397e-22,"start":180},{"end":384,"score":2.0999999917333043e-24,"start":295}],"model":"2divA01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":166,"score":3.999999984016789e-11,"start":100},{"end":263,"score":7.79999979536039e-14,"start":193},{"end":374,"score":1.6999999955788275e-15,"start":310}],"model":"PF00076","name":"RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":177,"score":0.0,"start":98},{"end":270,"score":0.0,"start":191},{"end":380,"score":0.0,"start":308}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47640","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":382,"score":0.0,"start":92}],"model":"PTHR47640:SF10","name":"TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":173,"score":1.9999999920083944e-12,"start":99},{"end":266,"score":3.699999973055313e-18,"start":192},{"end":376,"score":5.300000235704053e-22,"start":309}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":274,"score":2.6499955258846616e-40,"start":97},{"end":384,"score":3.900000125515584e-26,"start":293}],"model":"0049769","name":"RNA-binding domain, RBD"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12346","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":378,"score":3.0828566215145976e-44,"start":307}],"model":"cd12346","name":"RNA recognition motif 3 (RRM3) found in yeast negative growth regulatory protein NGR1 (RBP1), yeast protein NAM8 and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12611","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":178,"score":7.337199904278585e-33,"start":99}],"model":"cd12611","name":"RNA recognition motif 1 (RRM1) found in yeast negative growth regulatory protein NGR1, yeast protein NAM8 and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3275257,"start_pos":3273827,"strand":"forward"},"low_complexity_region_coords":[[66,76],[459,472]],"name":"cxr1","ortholog_annotations":[{"gene_uniquename":"SJAG_00474","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30813","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4932,"ortholog_uniquename":"YBR212W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00474","ortholog_taxonid":4932,"ortholog_uniquename":"YHR086W","reference_uniquename":"PMID:29761456"}],"product":"splicing factor Cxr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0005829","GO:0005634","GO:0010494","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003729":null,"GO:0005685":null,"GO:0005829":null,"GO:0006376":null,"GO:0010494":null,"GO:0071004":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00474.1"],"transcripts_by_uniquename":{"SJAG_00474.1":null},"uniprot_identifier":"B6JVQ9","uniquename":"SJAG_00474"}


id: SJAG_00475
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61668],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[103074],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[103075],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[103076],"is_not":false,"summary":null,"term":"GO:0032435"}],"cellular_component":[{"annotations":[103071],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[103072],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[103073],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103077],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[103078],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[103079],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[103080],"is_not":false,"summary":null,"term":"GO:0061995"},{"annotations":[103081],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[103082],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00475","GOA:B6JVR0","InterPro:IPR013083","InterPro:IPR027370","InterPro:IPR014001","UniProtKB/TrEMBL:B6JVR0","EnsemblGenomes-Tr:EEB05461","InterPro:IPR038718","InterPro:IPR001650","InterPro:IPR000330","InterPro:IPR001841","InterPro:IPR017907","InterPro:IPR027417"],"deletion_viability":"unknown","disordered_region_coords":[[1,56],[59,62],[72,78],[82,118],[135,191],[195,229],[234,275],[277,288],[302,303],[312,334],[353,354],[356,365],[400,402],[404,414],[120,123]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"},{"name":"rct1","uniquename":"SJAG_00470"}],"genes_by_uniquename":{"HGNC:11099":null,"SJAG_00475":null,"SPBC23E6.02":null,"YOR191W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":852,"score":1.3000000187446403e-8,"start":766}],"model":"4gb0A00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10810","interpro_id":"IPR038718","interpro_name":"SNF2-like, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":679,"score":0.0,"start":408}],"model":"3mwyW03","name":"Tandem AAA-ATPase domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":1079,"score":0.0,"start":681}],"model":"3mwyW04","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00176","interpro_id":"IPR000330","interpro_name":"SNF2, N-terminal","interpro_type":"Domain","locations":[{"end":744,"score":0.0,"start":434}],"model":"PF00176","name":"SNF2-related domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1017,"score":2.0999999493842217e-16,"start":906}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13445","interpro_id":"IPR027370","interpro_name":"Zinc finger, RING-type, eukaryotic","interpro_type":"Domain","locations":[{"end":811,"score":9.899999895424116e-6,"start":784}],"model":"PF13445","name":"RING-type zinc-finger"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00518","interpro_id":"IPR017907","interpro_name":"Zinc finger, RING-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":809,"score":0.0,"start":800}],"model":"PS00518","name":"Zinc finger RING-type signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":834,"score":0.0,"start":784}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":624,"score":0.0,"start":439}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1069,"score":0.0,"start":903}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45626","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1073,"score":0.0,"start":154}],"model":"PTHR45626:SF49","name":"TRANSCRIPTION TERMINATION FACTOR 2-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":632,"score":6.899999720953876e-29,"start":422}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":1017,"score":7.7999998817180465e-19,"start":934}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":666,"score":0.0,"start":396},{"end":1077,"score":0.0,"start":675}],"model":"0051486","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":841,"score":9.660000159783522e-7,"start":780}],"model":"0035646","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16449","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":834,"score":1.2609999657797744e-6,"start":784}],"model":"cd16449","name":"HC subclass of RING (RING-HC) finger and its variants"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18008","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":666,"score":0.0,"start":426}],"model":"cd18008","name":"DEXH-box helicase domain of SHPRH-like proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18793","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1028,"score":0.0,"start":899}],"model":"cd18793","name":"C-terminal helicase domain of the SNF family helicases"}],"location":{"chromosome_name":"supercont5.1","end_pos":3271862,"start_pos":3268558,"strand":"reverse"},"low_complexity_region_coords":[[124,134]],"name":"rrp2","ortholog_annotations":[{"gene_uniquename":"SJAG_00475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11099","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00475","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00475","ortholog_taxonid":4932,"ortholog_uniquename":"YOR191W","reference_uniquename":"PMID:29761456"}],"product":"DNA translocase/ SUMO-targeted ubiquitin ligase E3","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016887","GO:0006310","GO:0030163","GO:0140097","GO:0140096","GO:0005694","GO:0006281","GO:0016746","GO:0019787","GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0000785":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0006281":null,"GO:0006338":null,"GO:0008270":null,"GO:0016887":null,"GO:0032435":null,"GO:0061630":null,"GO:0061995":null,"GO:0140658":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00475.1"],"transcripts_by_uniquename":{"SJAG_00475.1":null},"uniprot_identifier":"B6JVR0","uniquename":"SJAG_00475"}


id: SJAG_00476
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103087],"is_not":false,"summary":null,"term":"GO:0035694"}],"cellular_component":[{"annotations":[103083],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[103084],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103085],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[103086],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103088],"is_not":false,"summary":null,"term":"GO:0008418"},{"annotations":[103089],"is_not":false,"summary":null,"term":"GO:0070773"}]},"dbxrefs":["InterPro:IPR003010","InterPro:IPR036526","InterPro:IPR039703","EnsemblGenomes-Gn:SJAG_00476","GOA:B6JVR1","UniProtKB/TrEMBL:B6JVR1","EnsemblGenomes-Tr:EEB05462"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"},{"name":"git1","uniquename":"SJAG_00472"},{"name":"nup85","uniquename":"SJAG_00471"}],"genes_by_uniquename":{"SJAG_00476":null,"SPBC23E6.03c":null,"YJR062C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.110.10","interpro_id":"IPR036526","interpro_name":"Carbon-nitrogen hydrolase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":280,"score":4.203895392974451e-45,"start":1}],"model":"1j31A00","name":"Carbon-nitrogen hydrolase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00795","interpro_id":"IPR003010","interpro_name":"Carbon-nitrogen hydrolase","interpro_type":"Domain","locations":[{"end":158,"score":8.699999809213047e-17,"start":2}],"model":"PF00795","name":"Carbon-nitrogen hydrolase"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50263","interpro_id":"IPR003010","interpro_name":"Carbon-nitrogen hydrolase","interpro_type":"Domain","locations":[{"end":280,"score":0.0,"start":1}],"model":"PS50263","name":"Carbon-nitrogen hydrolase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11750","interpro_id":"IPR039703","interpro_name":"Protein N-terminal amidase","interpro_type":"Family","locations":[{"end":279,"score":0.0,"start":1}],"model":"PTHR11750:SF26","name":"PROTEIN N-TERMINAL AMIDASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56317","interpro_id":"IPR036526","interpro_name":"Carbon-nitrogen hydrolase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":278,"score":4.499999923169034e-34,"start":1}],"model":"0037148","name":"Carbon-nitrogen hydrolase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3268439,"start_pos":3267545,"strand":"forward"},"name":"nta1","ortholog_annotations":[{"gene_uniquename":"SJAG_00476","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00476","ortholog_taxonid":4932,"ortholog_uniquename":"YJR062C","reference_uniquename":"PMID:29761456"}],"product":"protein N-terminal amidase Nta1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016810","GO:0005634","GO:0007005","GO:0005829","GO:0005739","GO:0030163","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005739":null,"GO:0005829":null,"GO:0008418":null,"GO:0035694":null,"GO:0070773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00476.1"],"transcripts_by_uniquename":{"SJAG_00476.1":null},"uniprot_identifier":"B6JVR1","uniquename":"SJAG_00476"}


id: SJAG_00479
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103100],"is_not":false,"summary":null,"term":"GO:0042273"}],"cellular_component":[{"annotations":[103097],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103098],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[103099],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103101],"is_not":false,"summary":null,"term":"GO:0008237"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00479","InterPro:IPR036388","InterPro:IPR036390","InterPro:IPR000994","EnsemblGenomes-Tr:EEB05464","InterPro:IPR036005","UniProtKB/TrEMBL:B6JVR3"],"deletion_viability":"unknown","disordered_region_coords":[[221,222],[243,247],[249,252],[224,224]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"},{"uniquename":"SJAG_00473"}],"genes_by_uniquename":{"HGNC:8550":null,"SJAG_00479":null,"SPBC23E6.05":null,"YDR101C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":347,"score":0.0,"start":287}],"model":"2q8kA02","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.230.10","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","interpro_type":"Homologous_superfamily","locations":[{"end":392,"score":0.0,"start":18}],"model":"2q8kA01","name":"Creatinase/methionine aminopeptidase superfamily"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00557","interpro_id":"IPR000994","interpro_name":"Peptidase M24","interpro_type":"Domain","locations":[{"end":133,"score":8.599999823388771e-9,"start":20}],"model":"PF00557","name":"Metallopeptidase family M24"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10804","interpro_id":"IPR047113","interpro_name":"Proliferation-associated protein 2G4/ARX1","interpro_type":"Family","locations":[{"end":402,"score":0.0,"start":8}],"model":"PTHR10804:SF102","name":"PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":350,"score":3.5400000797380926e-7,"start":282}],"model":"0045043","name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55920","interpro_id":"IPR036005","interpro_name":"Creatinase/aminopeptidase-like","interpro_type":"Homologous_superfamily","locations":[{"end":193,"score":3.930000016647378e-22,"start":13}],"model":"0035370","name":"Creatinase/aminopeptidase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01089","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":181,"score":0.0,"start":18}],"model":"cd01089","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3262018,"start_pos":3260705,"strand":"reverse"},"low_complexity_region_coords":[[145,155],[225,242]],"name":"arx1","ortholog_annotations":[{"gene_uniquename":"SJAG_00479","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8550","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00479","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00479","ortholog_taxonid":4932,"ortholog_uniquename":"YDR101C","reference_uniquename":"PMID:29761456"}],"product":"ribosomal export complex protein Arx1, peptidase family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0042254","GO:0005829","GO:0140096","GO:0005634","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005635":null,"GO:0005829":null,"GO:0008237":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00479.1"],"transcripts_by_uniquename":{"SJAG_00479.1":null},"uniprot_identifier":"B6JVR3","uniquename":"SJAG_00479"}


id: SJAG_00480
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103105],"is_not":false,"summary":null,"term":"GO:0009231"}],"cellular_component":[{"annotations":[103102],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103103],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[103104],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[103106],"is_not":false,"summary":null,"term":"GO:0008686"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05465","EnsemblGenomes-Gn:SJAG_00480","GOA:B6JVR4","UniProtKB/TrEMBL:B6JVR4","InterPro:IPR000422","InterPro:IPR017945"],"deletion_viability":"unknown","disordered_region_coords":[[31,33],[70,71],[102,103],[115,116]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"},{"name":"cxr1","uniquename":"SJAG_00474"}],"genes_by_uniquename":{"SJAG_00480":null,"SPBC23E6.06c":null,"YDR487C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.870.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":208,"score":0.0,"start":1}],"model":"1k4iA00","name":"DHBP synthase"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00180","interpro_id":"IPR000422","interpro_name":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_type":"Family","locations":[{"end":204,"score":0.0,"start":1}],"model":"MF_00180","name":"3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00926","interpro_id":"IPR000422","interpro_name":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_type":"Family","locations":[{"end":199,"score":0.0,"start":6}],"model":"PF00926","name":"3,4-dihydroxy-2-butanone 4-phosphate synthase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21327","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":196,"score":0.0,"start":1}],"model":"PTHR21327:SF18","name":"GTP CYCLOHYDROLASE II-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55821","interpro_id":"IPR017945","interpro_name":"DHBP synthase RibB-like alpha/beta domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":203,"score":0.0,"start":2}],"model":"0039907","name":"YrdC/RibB"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00506","interpro_id":"IPR000422","interpro_name":"3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB","interpro_type":"Family","locations":[{"end":199,"score":0.0,"start":1}],"model":"TIGR00506","name":"3,4-dihydroxy-2-butanone-4-phosphate synthase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3260445,"start_pos":3259582,"strand":"forward"},"name":"rib3","ortholog_annotations":[{"gene_uniquename":"SJAG_00480","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23E6.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00480","ortholog_taxonid":4932,"ortholog_uniquename":"YDR487C","reference_uniquename":"PMID:29761456"}],"product":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006766","GO:0016829","GO:0005634","GO:0005739","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005758":null,"GO:0005829":null,"GO:0008686":null,"GO:0009231":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00480.1"],"transcripts_by_uniquename":{"SJAG_00480.1":null},"uniprot_identifier":"B6JVR4","uniquename":"SJAG_00480"}


id: SJAG_00481
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[102938],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[102939],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102940],"is_not":false,"summary":null,"term":"GO:0003682"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVR5","EnsemblGenomes-Gn:SJAG_00481","EnsemblGenomes-Tr:EEB05466"],"deletion_viability":"unknown","disordered_region_coords":[[633,638],[536,618]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"},{"name":"rrp2","uniquename":"SJAG_00475"}],"genes_by_uniquename":{"HGNC:20444":null,"HGNC:20445":null,"SJAG_00481":null,"SPBC21C3.14c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3258757,"start_pos":3256841,"strand":"forward"},"low_complexity_region_coords":[[21,28],[264,293],[297,307],[314,330],[619,632]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20444","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20445","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00481","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.14c","reference_uniquename":"PMID:21511999"}],"product":"chromatin binding protein ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003682":null,"GO:0005634":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00481.1"],"transcripts_by_uniquename":{"SJAG_00481.1":null},"uniprot_identifier":"B6JVR5","uniquename":"SJAG_00481"}


id: SJAG_00482
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[102941],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[102942],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102943],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102944],"is_not":false,"summary":null,"term":"GO:0004029"}]},"dbxrefs":["InterPro:IPR016160","InterPro:IPR016162","InterPro:IPR029510","UniProtKB/TrEMBL:B6JVR6","EnsemblGenomes-Tr:EEB05467","InterPro:IPR016161","InterPro:IPR016163","GOA:B6JVR6","EnsemblGenomes-Gn:SJAG_00482","InterPro:IPR015590"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"},{"name":"nta1","uniquename":"SJAG_00476"}],"genes_by_uniquename":{"SJAG_00482":null,"SPBC21C3.15c":null,"YHR039C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.309.10","interpro_id":"IPR016163","interpro_name":"Aldehyde dehydrogenase, C-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":441,"score":0.0,"start":246}],"model":"4i9bA02","name":"Aldehyde Dehydrogenase; Chain A, domain 2"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.605.10","interpro_id":"IPR016162","interpro_name":"Aldehyde dehydrogenase, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":469,"score":0.0,"start":10}],"model":"4i9bA01","name":"Aldehyde Dehydrogenase; Chain A, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00171","interpro_id":"IPR015590","interpro_name":"Aldehyde dehydrogenase domain","interpro_type":"Domain","locations":[{"end":471,"score":0.0,"start":8}],"model":"PF00171","name":"Aldehyde dehydrogenase family"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00070","interpro_id":"IPR016160","interpro_name":"Aldehyde dehydrogenase, cysteine active site","interpro_type":"Conserved_site","locations":[{"end":281,"score":0.0,"start":270}],"model":"PS00070","name":"Aldehyde dehydrogenases cysteine active site"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00687","interpro_id":"IPR029510","interpro_name":"Aldehyde dehydrogenase, glutamic acid active site","interpro_type":"Conserved_site","locations":[{"end":249,"score":0.0,"start":242}],"model":"PS00687","name":"Aldehyde dehydrogenases glutamic acid active site"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11699","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":471,"score":0.0,"start":7}],"model":"PTHR11699:SF25","name":"ALDEHYDE DEHYDROGENASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53720","interpro_id":"IPR016161","interpro_name":"Aldehyde/histidinol dehydrogenase","interpro_type":"Homologous_superfamily","locations":[{"end":475,"score":0.0,"start":5}],"model":"0034877","name":"ALDH-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07098","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":475,"score":0.0,"start":13}],"model":"cd07098","name":"Aldehyde dehydrogenase family 15A1 and 22A1-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3256063,"start_pos":3254483,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00482","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00482","ortholog_taxonid":4932,"ortholog_uniquename":"YHR039C","reference_uniquename":"PMID:29761456"}],"product":"aldehyde dehydrogenase, implicated in cellular detoxification","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016491","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004029":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null},"tm_domain_coords":[[498,520]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00482.1"],"transcripts_by_uniquename":{"SJAG_00482.1":null},"uniprot_identifier":"B6JVR6","uniquename":"SJAG_00482"}


id: SJAG_00483
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102950],"is_not":false,"summary":null,"term":"GO:0006368"}],"cellular_component":[{"annotations":[102945],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[102946],"is_not":false,"summary":null,"term":"GO:0000775"},{"annotations":[102947],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102948],"is_not":false,"summary":null,"term":"GO:0032044"},{"annotations":[102949],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[71201],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[102951],"is_not":false,"summary":null,"term":"GO:0003711"},{"annotations":[102952],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR022800","InterPro:IPR009287","InterPro:IPR038510","EnsemblGenomes-Gn:SJAG_00483","EnsemblGenomes-Tr:EEB05468","InterPro:IPR029040","GOA:B6JVR7","UniProtKB/TrEMBL:B6JVR7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"},{"name":"utp10","uniquename":"SJAG_05187"}],"genes_by_uniquename":{"HGNC:11467":null,"SJAG_00483":null,"SPBC21C3.16c":null,"YGR063C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.210","interpro_id":"IPR038510","interpro_name":"Spt4 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":105,"score":7.899999724124953e-29,"start":7}],"model":"6ir9V00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06093","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2 zinc finger","interpro_type":"Domain","locations":[{"end":78,"score":7.799999777714625e-23,"start":10}],"model":"PF06093","name":"Spt4/RpoE2 zinc finger"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF025023","interpro_id":"IPR009287","interpro_name":"Transcription initiation Spt4","interpro_type":"Family","locations":[{"end":104,"score":1.2999999803553735e-34,"start":1}],"model":"PIRSF025023","name":"Transcription elongation factor Spt4"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12882","interpro_id":"IPR009287","interpro_name":"Transcription initiation Spt4","interpro_type":"Family","locations":[{"end":102,"score":6.99999984096753e-24,"start":7}],"model":"PTHR12882:SF1","name":"SUPPRESSOR OF TY 4"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01389","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2 zinc finger","interpro_type":"Domain","locations":[{"end":78,"score":1.9000000436408652e-30,"start":9}],"model":"SM01389","name":"Spt4/RpoE2 zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF63393","interpro_id":"IPR029040","interpro_name":"RNA polymerase subunit RPABC4/transcription elongation factor Spt4","interpro_type":"Homologous_superfamily","locations":[{"end":77,"score":2.8800001120911356e-14,"start":5}],"model":"0049274","name":"RNA polymerase subunits"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07973","interpro_id":"IPR022800","interpro_name":"Spt4/RpoE2 zinc finger","interpro_type":"Domain","locations":[{"end":96,"score":7.080901270079733e-41,"start":8}],"model":"cd07973","name":"Transcription elongation factor Spt4"}],"location":{"chromosome_name":"supercont5.1","end_pos":3253840,"start_pos":3253523,"strand":"forward"},"name":"spt4","ortholog_annotations":[{"gene_uniquename":"SJAG_00483","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11467","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00483","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00483","ortholog_taxonid":4932,"ortholog_uniquename":"YGR063C","reference_uniquename":"PMID:29761456"}],"product":"DSIF transcription elongation factor complex subunit Spt4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005694","GO:0006351","GO:0003711","GO:0005829","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000775":null,"GO:0000785":null,"GO:0000993":null,"GO:0003711":null,"GO:0005634":null,"GO:0005829":null,"GO:0006368":null,"GO:0008270":null,"GO:0032044":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00483.1"],"transcripts_by_uniquename":{"SJAG_00483.1":null},"uniprot_identifier":"B6JVR7","uniquename":"SJAG_00483"}


id: SJAG_00484
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102954],"is_not":false,"summary":null,"term":"GO:0006888"}],"cellular_component":[{"annotations":[102953],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00484","InterPro:IPR028000","UniProtKB/TrEMBL:B6JVR8","EnsemblGenomes-Tr:EEB05469","GOA:B6JVR8"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"},{"name":"arx1","uniquename":"SJAG_00479"}],"genes_by_uniquename":{"SJAG_00484":null,"SPBC21C3.17c":null,"YKL077W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14610","interpro_id":"IPR028000","interpro_name":"Pma1 stabilization in the Golgi protein 1","interpro_type":"Family","locations":[{"end":172,"score":4.699999850847956e-21,"start":10}],"model":"PF14610","name":"Ykl077w/Psg1 (Pma1 Stabilization in Golgi)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3253018,"start_pos":3252327,"strand":"forward"},"name":"psg1","ortholog_annotations":[{"gene_uniquename":"SJAG_00484","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00484","ortholog_taxonid":4932,"ortholog_uniquename":"YKL077W","reference_uniquename":"PMID:29761456"}],"product":"membrane trafficking protein, ER to Golgi Psg1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0006888":null},"tm_domain_coords":[[143,165]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00484.1"],"transcripts_by_uniquename":{"SJAG_00484.1":null},"uniprot_identifier":"B6JVR8","uniquename":"SJAG_00484"}


id: SJAG_00485
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110121],"is_not":false,"summary":null,"term":"GO:0046379"},{"annotations":[91355],"is_not":false,"summary":null,"term":"GO:0071852"}],"cellular_component":[{"annotations":[91352,110118],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[91353,110119],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91354,110120],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[91356,110122],"is_not":false,"summary":null,"term":"GO:0004556"},{"annotations":[91357,110123],"is_not":false,"summary":null,"term":"GO:0005509"}]},"dbxrefs":["InterPro:IPR017853","UniProtKB/TrEMBL:B6JVR9","GOA:B6JVR9","InterPro:IPR006047","EnsemblGenomes-Tr:EEB05470","EnsemblGenomes-Gn:SJAG_00485","InterPro:IPR013777"],"deletion_viability":"unknown","disordered_region_coords":[[362,363]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"},{"name":"rib3","uniquename":"SJAG_00480"}],"genes_by_uniquename":{"SJAG_00485":null,"SPAC27E2.01":null,"SPCC11E10.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.1180","interpro_id":"IPR013780","interpro_name":"Glycosyl hydrolase, all-beta","interpro_type":"Homologous_superfamily","locations":[{"end":492,"score":0.00006199999916134402,"start":399}],"model":"3vm7A02","name":"Golgi alpha-mannosidase II"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.80","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":396,"score":0.0,"start":27}],"model":"2aaaA01","name":"Glycosidases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00128","interpro_id":"IPR006047","interpro_name":"Glycosyl hydrolase, family 13, catalytic domain","interpro_type":"Domain","locations":[{"end":364,"score":0.0,"start":63}],"model":"PF00128","name":"Alpha amylase, catalytic domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001024","interpro_id":"IPR013777","interpro_name":"Alpha-amylase-like","interpro_type":"Family","locations":[{"end":491,"score":0.0,"start":4}],"model":"PIRSF001024","name":"Alpha-amylase, fungal type"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10357","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":440,"score":0.0,"start":28}],"model":"PTHR10357:SF229","name":"ALPHA-AMYLASE FAMILY MEMBER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00642","interpro_id":"IPR006047","interpro_name":"Glycosyl hydrolase, family 13, catalytic domain","interpro_type":"Domain","locations":[{"end":392,"score":0.0,"start":38}],"model":"SM00642","name":"Alpha-amylase domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51445","interpro_id":"IPR017853","interpro_name":"Glycoside hydrolase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":392,"score":0.0,"start":31}],"model":"0051733","name":"(Trans)glycosidases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd11319","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":398,"score":0.0,"start":28}],"model":"cd11319","name":"Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)"}],"location":{"chromosome_name":"supercont5.1","end_pos":3251801,"start_pos":3250200,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00485","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC27E2.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00485","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC11E10.09c","reference_uniquename":"PMID:21511999"}],"product":"alpha amylase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0071554","GO:0005829","GO:0016798","GO:0009986","GO:0005975","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004556":null,"GO:0005509":null,"GO:0005634":null,"GO:0005829":null,"GO:0009986":null,"GO:0046379":null,"GO:0071852":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00485.1"],"transcripts_by_uniquename":{"SJAG_00485.1":null},"uniprot_identifier":"B6JVR9","uniquename":"SJAG_00485"}


id: SJAG_00486
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102958],"is_not":false,"summary":null,"term":"GO:0031322"},{"annotations":[102959],"is_not":false,"summary":null,"term":"GO:0007135"},{"annotations":[78979],"is_not":false,"summary":null,"term":"GO:0044773"},{"annotations":[102960],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[102955],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[102956],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102957],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102961],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[102962],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR000719","UniProtKB/TrEMBL:B6JVS0","GOA:B6JVS0","EnsemblGenomes-Gn:SJAG_00486","EnsemblGenomes-Tr:EEB05471","InterPro:IPR011009"],"deletion_viability":"unknown","disordered_region_coords":[[263,265]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"},{"uniquename":"SJAG_00481"}],"genes_by_uniquename":{"HGNC:1745":null,"SJAG_00486":null,"SPBC21C3.18":null,"YDL017W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":431,"score":9.199524418292424e-42,"start":147}],"model":"4e7wA02","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":145,"score":6.199999899290055e-28,"start":20}],"model":"4f9cA01","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":406,"score":1.7999999463087394e-34,"start":88}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":406,"score":0.0,"start":40}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR44167","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":409,"score":0.0,"start":26}],"model":"PTHR44167:SF23","name":"OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":406,"score":0.0,"start":40}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":408,"score":0.0,"start":26}],"model":"0039792","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14019","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":406,"score":0.0,"start":38}],"model":"cd14019","name":"Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3250042,"start_pos":3248372,"strand":"reverse"},"low_complexity_region_coords":[[75,79],[375,389]],"name":"spo4","ortholog_annotations":[{"gene_uniquename":"SJAG_00486","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1745","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00486","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.18","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00486","ortholog_taxonid":4932,"ortholog_uniquename":"YDL017W","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase (DDK family) Spo4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0004672","GO:0030437","GO:0005634","GO:0000226","GO:0016301","GO:0140013","GO:0005829","GO:0140096","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0007135":null,"GO:0007165":null,"GO:0031322":null,"GO:0044773":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00486.1"],"transcripts_by_uniquename":{"SJAG_00486.1":null},"uniprot_identifier":"B6JVS0","uniquename":"SJAG_00486"}


id: SJAG_00487
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102965],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[102963],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102964],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVS1","InterPro:IPR036786","EnsemblGenomes-Gn:SJAG_00487","EnsemblGenomes-Tr:EEB05472","InterPro:IPR039100","InterPro:IPR019783"],"deletion_viability":"unknown","disordered_region_coords":[[3,6],[36,37],[60,66],[68,71],[101,105]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"},{"uniquename":"SJAG_00482"}],"genes_by_uniquename":{"HGNC:19440":null,"SJAG_00487":null,"SPBC21C3.19":null,"YHR087W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1250.10","interpro_id":"IPR036786","interpro_name":"Ribosome maturation protein SBDS, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":104,"score":4.399999888767292e-26,"start":6}],"model":"1nynA00","name":"Ribosome maturation protein SBDS, N-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01172","interpro_id":"IPR019783","interpro_name":"Ribosome maturation protein SDO1/SBDS, N-terminal","interpro_type":"Domain","locations":[{"end":98,"score":8.400000095321907e-18,"start":17}],"model":"PF01172","name":"Shwachman-Bodian-Diamond syndrome (SBDS) protein"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF89895","interpro_id":"IPR036786","interpro_name":"Ribosome maturation protein SBDS, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":100,"score":9.019999875313727e-21,"start":7}],"model":"0041627","name":"FYSH domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3248053,"start_pos":3247736,"strand":"reverse"},"name":"rtc3","ortholog_annotations":[{"gene_uniquename":"SJAG_00487","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19440","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00487","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.19","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00487","ortholog_taxonid":4932,"ortholog_uniquename":"YHR087W","reference_uniquename":"PMID:29761456"}],"product":"SBDS family protein Rtc3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00487.1"],"transcripts_by_uniquename":{"SJAG_00487.1":null},"uniprot_identifier":"B6JVS1","uniquename":"SJAG_00487"}


id: SJAG_00488
data:
  {"coiled_coil_coords":[[26,53]],"cv_annotations":{"biological_process":[{"annotations":[101488],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[101489],"is_not":false,"summary":null,"term":"GO:0006430"}],"cellular_component":[{"annotations":[101487],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[101490],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[101491],"is_not":false,"summary":null,"term":"GO:0004824"}]},"dbxrefs":["InterPro:IPR004365","InterPro:IPR004364","InterPro:IPR002313","InterPro:IPR006195","InterPro:IPR018149","EnsemblGenomes-Gn:SJAG_00488","UniProtKB/TrEMBL:B6JVS2","InterPro:IPR012340","EnsemblGenomes-Tr:EEB05473","GOA:B6JVS2","InterPro:IPR034762"],"deletion_viability":"unknown","disordered_region_coords":[[1,15],[17,20],[65,99],[516,527],[583,588],[24,25],[54,53]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"},{"name":"spt4","uniquename":"SJAG_00483"}],"genes_by_uniquename":{"HGNC:6215":null,"SJAG_00488":null,"SPBC17G9.03c":null,"YDR037W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":220,"score":4.90454462513686e-43,"start":62}],"model":"4up7A01","name":"Nucleic acid-binding proteins"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.930.10","interpro_id":"IPR045864","interpro_name":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_type":"Homologous_superfamily","locations":[{"end":589,"score":0.0,"start":221}],"model":"4upaA02","name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00252","interpro_id":"IPR002313","interpro_name":"Lysine-tRNA ligase, class II","interpro_type":"Family","locations":[{"end":579,"score":0.0,"start":77}],"model":"MF_00252","name":"Lysine--tRNA ligase [lysS]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00152","interpro_id":"IPR004364","interpro_name":"Aminoacyl-tRNA synthetase, class II (D/K/N)","interpro_type":"Domain","locations":[{"end":576,"score":0.0,"start":227}],"model":"PF00152","name":"tRNA synthetases class II (D, K and N)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01336","interpro_id":"IPR004365","interpro_name":"OB-fold nucleic acid binding domain, AA-tRNA synthetase-type","interpro_type":"Domain","locations":[{"end":207,"score":1.5999999936067155e-10,"start":125}],"model":"PF01336","name":"OB-fold nucleic acid binding domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF039101","interpro_id":"IPR034762","interpro_name":"Bacterial/eukaryotic lysine-tRNA ligase, class II","interpro_type":"Family","locations":[{"end":590,"score":0.0,"start":8}],"model":"PIRSF039101","name":"Lysine--tRNA ligase, class II"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00982","interpro_id":"IPR018149","interpro_name":"Lysyl-tRNA synthetase, class II, C-terminal","interpro_type":"Domain","locations":[{"end":272,"score":1.4999999866463684e-37,"start":262},{"end":294,"score":1.4999999866463684e-37,"start":278},{"end":320,"score":1.4999999866463684e-37,"start":307},{"end":342,"score":1.4999999866463684e-37,"start":325},{"end":477,"score":1.4999999866463684e-37,"start":461}],"model":"PR00982","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50862","interpro_id":"IPR006195","interpro_name":"Aminoacyl-tRNA synthetase, class II","interpro_type":"Domain","locations":[{"end":578,"score":0.0,"start":247}],"model":"PS50862","name":"Aminoacyl-transfer RNA synthetases class-II family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42918","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":579,"score":0.0,"start":25}],"model":"PTHR42918:SF9","name":"LYSYL-TRNA SYNTHETASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50249","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":217,"score":3.4299999455193077e-32,"start":69}],"model":"0045922","name":"Nucleic acid-binding proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55681","interpro_id":"IPR045864","interpro_name":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_type":"Homologous_superfamily","locations":[{"end":577,"score":0.0,"start":225}],"model":"0035444","name":"Class II aaRS and biotin synthetases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00499","interpro_id":"IPR002313","interpro_name":"Lysine-tRNA ligase, class II","interpro_type":"Family","locations":[{"end":579,"score":0.0,"start":72}],"model":"TIGR00499","name":"lysine--tRNA ligase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00775","interpro_id":"IPR018149","interpro_name":"Lysyl-tRNA synthetase, class II, C-terminal","interpro_type":"Domain","locations":[{"end":578,"score":0.0,"start":240}],"model":"cd00775","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04322","interpro_id":"IPR044136","interpro_name":"Lysine-tRNA ligase, class II, N-terminal","interpro_type":"Domain","locations":[{"end":237,"score":3.0153999259044832e-30,"start":124}],"model":"cd04322","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3247400,"start_pos":3245628,"strand":"reverse"},"low_complexity_region_coords":[[54,64],[174,188]],"name":"krs1","ortholog_annotations":[{"gene_uniquename":"SJAG_00488","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6215","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00488","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17G9.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00488","ortholog_taxonid":4932,"ortholog_uniquename":"YDR037W","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic lysine-tRNA ligase Krs1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0002181","GO:0006520","GO:0140098","GO:0016874","GO:0006399","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004824":null,"GO:0005524":null,"GO:0005737":null,"GO:0006430":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00488.1"],"transcripts_by_uniquename":{"SJAG_00488.1":null},"uniprot_identifier":"B6JVS2","uniquename":"SJAG_00488"}


id: SJAG_00489
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102919],"is_not":false,"summary":null,"term":"GO:0098869"}],"cellular_component":[{"annotations":[102917],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102918],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102920],"is_not":false,"summary":null,"term":"GO:0004601"},{"annotations":[102921],"is_not":false,"summary":null,"term":"GO:0047134"}]},"dbxrefs":["InterPro:IPR010357","InterPro:IPR036249","EnsemblGenomes-Tr:EEB05474","EnsemblGenomes-Gn:SJAG_00489","UniProtKB/TrEMBL:B6JVS3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"},{"name":"psg1","uniquename":"SJAG_00484"}],"genes_by_uniquename":{"HGNC:28218":null,"SJAG_00489":null,"SPBC21C3.12c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":124,"score":4.800000251571292e-22,"start":2}],"model":"1v9wA00","name":"Glutaredoxin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06110","interpro_id":"IPR010357","interpro_name":"Thioredoxin domain-containing protein 17-like domain","interpro_type":"Domain","locations":[{"end":105,"score":1.4999999397961872e-13,"start":12}],"model":"PF06110","name":"Eukaryotic protein of unknown function (DUF953)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12452","interpro_id":"IPR045108","interpro_name":"Thioredoxin domain-containing protein 17-like","interpro_type":"Family","locations":[{"end":124,"score":3.600000040852246e-18,"start":15}],"model":"PTHR12452:SF0","name":"42-9-9 PROTEIN-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52833","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":96,"score":1.0699999913876823e-12,"start":9}],"model":"0050108","name":"Thioredoxin-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3244964,"start_pos":3244590,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00489","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28218","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00489","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.12c","reference_uniquename":"PMID:21511999"}],"product":"thioredoxin family protein, peroxidase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0140096","GO:0098754","GO:0016491","GO:0015036","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004601":null,"GO:0005634":null,"GO:0005829":null,"GO:0047134":null,"GO:0098869":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00489.1"],"transcripts_by_uniquename":{"SJAG_00489.1":null},"uniprot_identifier":"B6JVS3","uniquename":"SJAG_00489"}


id: SJAG_00490
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102915],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[102916],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[102911],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[102912],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102913],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[102914],"is_not":false,"summary":null,"term":"GO:0012506"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00490","InterPro:IPR029071","EnsemblGenomes-Tr:EEB05475","InterPro:IPR021569","UniProtKB/TrEMBL:B6JVS4"],"deletion_viability":"unknown","disordered_region_coords":[[259,378],[401,405],[409,410],[412,413],[415,424],[426,428],[176,183],[198,242]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"},{"uniquename":"SJAG_00485"}],"genes_by_uniquename":{"HGNC:13825":null,"SJAG_00490":null,"SPBC21C3.11":null,"YMR067C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.90","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":97,"score":3.500000040224799e-13,"start":12}],"model":"2al3A00","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11470","interpro_id":"IPR021569","interpro_name":"TUG ubiquitin-like domain","interpro_type":"Domain","locations":[{"end":83,"score":8.299999749528534e-17,"start":22}],"model":"PF11470","name":"TUG ubiquitin-like domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46467","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":452,"score":0.0,"start":17}],"model":"PTHR46467:SF1","name":"TETHER CONTAINING UBX DOMAIN FOR GLUT4"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54236","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":89,"score":3.529999903495451e-11,"start":19},{"end":420,"score":2.429999995001708e-6,"start":363}],"model":"0051789","name":"Ubiquitin-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3244299,"start_pos":3242875,"strand":"forward"},"low_complexity_region_coords":[[184,197],[243,258]],"name":"ubx4","ortholog_annotations":[{"gene_uniquename":"SJAG_00490","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13825","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00490","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00490","ortholog_taxonid":4932,"ortholog_uniquename":"YMR067C","reference_uniquename":"PMID:29761456"}],"product":"UBX domain protein Ubx4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0030163","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0006511":null,"GO:0006886":null,"GO:0012506":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00490.1"],"transcripts_by_uniquename":{"SJAG_00490.1":null},"uniprot_identifier":"B6JVS4","uniquename":"SJAG_00490"}


id: SJAG_00491
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102909],"is_not":false,"summary":null,"term":"GO:0009231"}],"cellular_component":[{"annotations":[102907],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102908],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102910],"is_not":false,"summary":null,"term":"GO:0008703"}]},"dbxrefs":["GOA:B6JVS5","EnsemblGenomes-Gn:SJAG_00491","InterPro:IPR002734","InterPro:IPR024072","UniProtKB/TrEMBL:B6JVS5","EnsemblGenomes-Tr:EEB05476"],"deletion_viability":"unknown","disordered_region_coords":[[38,39],[70,74],[76,83],[85,87]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"},{"name":"spo4","uniquename":"SJAG_00486"}],"genes_by_uniquename":{"SJAG_00491":null,"SPBC21C3.10c":null,"YBR153W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.430.10","interpro_id":"IPR024072","interpro_name":"Dihydrofolate reductase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":243,"score":0.0,"start":2}],"model":"4ha7B00","name":"Dihydrofolate Reductase, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01872","interpro_id":"IPR002734","interpro_name":"Bacterial bifunctional deaminase-reductase, C-terminal","interpro_type":"Domain","locations":[{"end":239,"score":6.7999997808220795e-28,"start":10}],"model":"PF01872","name":"RibD C-terminal domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR38011","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":214,"score":2.700000020805014e-38,"start":6}],"model":"PTHR38011:SF7","name":"DIHYDROFOLATE REDUCTASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_8G06820)"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53597","interpro_id":"IPR024072","interpro_name":"Dihydrofolate reductase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":243,"score":9.200000223020272e-35,"start":9}],"model":"0051866","name":"Dihydrofolate reductase-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3242770,"start_pos":3242036,"strand":"forward"},"name":"rib7","ortholog_annotations":[{"gene_uniquename":"SJAG_00491","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00491","ortholog_taxonid":4932,"ortholog_uniquename":"YBR153W","reference_uniquename":"PMID:29761456"}],"product":"5-amino-6-(5-phosphoribosylamino) uracil reductase Rib7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006766","GO:0016491","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008703":null,"GO:0009231":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00491.1"],"transcripts_by_uniquename":{"SJAG_00491.1":null},"uniprot_identifier":"B6JVS5","uniquename":"SJAG_00491"}


id: SJAG_00493
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102904],"is_not":false,"summary":null,"term":"GO:0006572"}],"cellular_component":[{"annotations":[102903],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[102905],"is_not":false,"summary":null,"term":"GO:0018773"},{"annotations":[102906],"is_not":false,"summary":null,"term":"GO:0047621"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVS6","EnsemblGenomes-Tr:EEB05477","EnsemblGenomes-Gn:SJAG_00493","InterPro:IPR011234","InterPro:IPR036663","GOA:B6JVS6"],"deletion_viability":"unknown","disordered_region_coords":[[184,186],[193,198],[200,201]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"},{"name":"rtc3","uniquename":"SJAG_00487"}],"genes_by_uniquename":{"HGNC:14169":null,"SJAG_00493":null,"SPBC21C3.09c":null,"YNL168C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.850.10","interpro_id":"IPR036663","interpro_name":"Fumarylacetoacetase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":220,"score":0.0,"start":1}],"model":"1nkqE00","name":"Fumarylacetoacetase-like, C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01557","interpro_id":"IPR011234","interpro_name":"Fumarylacetoacetase-like, C-terminal","interpro_type":"Domain","locations":[{"end":202,"score":0.0,"start":9}],"model":"PF01557","name":"Fumarylacetoacetate (FAA) hydrolase family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11820","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":204,"score":0.0,"start":6}],"model":"PTHR11820:SF7","name":"ACYLPYRUVASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56529","interpro_id":"IPR036663","interpro_name":"Fumarylacetoacetase-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":204,"score":0.0,"start":9}],"model":"0041438","name":"FAH"}],"location":{"chromosome_name":"supercont5.1","end_pos":3241396,"start_pos":3240682,"strand":"reverse"},"name":"oaa1","ortholog_annotations":[{"gene_uniquename":"SJAG_00493","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14169","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00493","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00493","ortholog_taxonid":4932,"ortholog_uniquename":"YNL168C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial acylpyruvase Oaa1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006520","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0006572":null,"GO:0018773":null,"GO:0047621":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00493.1"],"transcripts_by_uniquename":{"SJAG_00493.1":null},"uniprot_identifier":"B6JVS6","uniquename":"SJAG_00493"}


id: SJAG_00495
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102898],"is_not":false,"summary":null,"term":"GO:0019544"},{"annotations":[102899],"is_not":false,"summary":null,"term":"GO:0010121"},{"annotations":[102900],"is_not":false,"summary":null,"term":"GO:0055129"}],"cellular_component":[{"annotations":[102896],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102897],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[102901],"is_not":false,"summary":null,"term":"GO:0004587"},{"annotations":[102902],"is_not":false,"summary":null,"term":"GO:0030170"}]},"dbxrefs":["InterPro:IPR015424","InterPro:IPR034758","EnsemblGenomes-Gn:SJAG_00495","GOA:B6JVS7","InterPro:IPR015421","InterPro:IPR005814","UniProtKB/TrEMBL:B6JVS7","InterPro:IPR015422","InterPro:IPR010164","EnsemblGenomes-Tr:EEB05478"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"},{"name":"krs1","uniquename":"SJAG_00488"}],"genes_by_uniquename":{"HGNC:8091":null,"SJAG_00495":null,"SPBC21C3.08c":null,"YLR438W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.640.10","interpro_id":"IPR015421","interpro_name":"Pyridoxal phosphate-dependent transferase, major domain","interpro_type":"Homologous_superfamily","locations":[{"end":324,"score":0.0,"start":64}],"model":"4nogA02","name":"Type I PLP-dependent aspartate aminotransferase-like (Major domain)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1150.10","interpro_id":"IPR015422","interpro_name":"Pyridoxal phosphate-dependent transferase, small domain","interpro_type":"Homologous_superfamily","locations":[{"end":409,"score":0.0,"start":17}],"model":"4nogA01","name":"Aspartate Aminotransferase, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00202","interpro_id":"IPR005814","interpro_name":"Aminotransferase class-III","interpro_type":"Family","locations":[{"end":418,"score":0.0,"start":20}],"model":"PF00202","name":"Aminotransferase class-III"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF000521","interpro_id":"IPR005814","interpro_name":"Aminotransferase class-III","interpro_type":"Family","locations":[{"end":165,"score":2.300000005561742e-6,"start":3},{"end":421,"score":9.299999963663331e-32,"start":178}],"model":"PIRSF000521","name":"4-aminobutyrate/lysine/ornithine transaminase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00600","interpro_id":"IPR005814","interpro_name":"Aminotransferase class-III","interpro_type":"Family","locations":[{"end":277,"score":0.0,"start":240}],"model":"PS00600","name":"Aminotransferases class-III pyridoxal-phosphate attachment site"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11986","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":418,"score":0.0,"start":6}],"model":"PTHR11986:SF18","name":"AMINOTRANSFERASE CLASS III"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53383","interpro_id":"IPR015424","interpro_name":"Pyridoxal phosphate-dependent transferase","interpro_type":"Homologous_superfamily","locations":[{"end":418,"score":0.0,"start":19}],"model":"0051517","name":"PLP-dependent transferases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01885","interpro_id":"IPR010164","interpro_name":"Ornithine aminotransferase","interpro_type":"Family","locations":[{"end":418,"score":0.0,"start":11}],"model":"TIGR01885","name":"ornithine--oxo-acid transaminase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00610","interpro_id":"IPR005814","interpro_name":"Aminotransferase class-III","interpro_type":"Family","locations":[{"end":418,"score":0.0,"start":13}],"model":"cd00610","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3239549,"start_pos":3238242,"strand":"reverse"},"name":"car2","ortholog_annotations":[{"gene_uniquename":"SJAG_00495","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8091","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00495","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00495","ortholog_taxonid":4932,"ortholog_uniquename":"YLR438W","reference_uniquename":"PMID:29761456"}],"product":"ornithine transaminase Car2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016769","GO:0005634","GO:0006520","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004587":null,"GO:0005634":null,"GO:0005829":null,"GO:0010121":null,"GO:0019544":null,"GO:0030170":null,"GO:0055129":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00495.1"],"transcripts_by_uniquename":{"SJAG_00495.1":null},"uniprot_identifier":"B6JVS7","uniquename":"SJAG_00495"}


id: SJAG_00496
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102878],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[102876],"is_not":false,"summary":null,"term":"GO:0031966"},{"annotations":[102877],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[102879],"is_not":false,"summary":null,"term":"GO:0016301"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00496","InterPro:IPR011009","UniProtKB/TrEMBL:B6JVS8","InterPro:IPR004147","GOA:B6JVS8","EnsemblGenomes-Tr:EEB05479"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"},{"uniquename":"SJAG_00489"}],"genes_by_uniquename":{"HGNC:19039":null,"SJAG_00496":null,"SPBC21C3.03":null,"YPL109C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03109","interpro_id":"IPR004147","interpro_name":"ABC1 atypical kinase-like domain","interpro_type":"Domain","locations":[{"end":479,"score":0.0,"start":197}],"model":"PF03109","name":"ABC1 atypical kinase-like domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45890","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":584,"score":0.0,"start":105}],"model":"PTHR45890:SF1","name":"AARF DOMAIN CONTAINING KINASE 2 (PREDICTED)"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":481,"score":5.119999916928814e-15,"start":225}],"model":"0054547","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13971","interpro_id":"IPR044095","interpro_name":"ADCK2-like dom","interpro_type":"Domain","locations":[{"end":514,"score":0.0,"start":197}],"model":"cd13971","name":"aarF domain containing kinase 2 and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3237690,"start_pos":3235786,"strand":"reverse"},"low_complexity_region_coords":[[79,88],[340,353]],"name":"cqd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00496","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19039","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00496","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00496","ortholog_taxonid":4932,"ortholog_uniquename":"YPL109C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0016301","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0007005":null,"GO:0016301":null,"GO:0031966":null},"tm_domain_coords":[[118,140]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00496.1"],"transcripts_by_uniquename":{"SJAG_00496.1":null},"uniprot_identifier":"B6JVS8","uniquename":"SJAG_00496"}


id: SJAG_00497
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102882],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[102880],"is_not":false,"summary":null,"term":"GO:0005762"},{"annotations":[102881],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[102883],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR000271","EnsemblGenomes-Gn:SJAG_00497","UniProtKB/TrEMBL:B6JVS9","EnsemblGenomes-Tr:EEB05480","GOA:B6JVS9"],"deletion_viability":"unknown","disordered_region_coords":[[60,62],[72,74],[85,86],[89,91],[93,95],[97,100]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"},{"name":"ubx4","uniquename":"SJAG_00490"}],"genes_by_uniquename":{"HGNC:14488":null,"SJAG_00497":null,"SPBC21C3.04c":null,"YDR115W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.3980","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":100,"score":6.299999864696277e-19,"start":55}],"model":"4v19700","name":""},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00391","interpro_id":"IPR000271","interpro_name":"Ribosomal protein L34","interpro_type":"Family","locations":[{"end":100,"score":0.0,"start":57}],"model":"MF_00391","name":"50S ribosomal protein L34 [rpmH]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00468","interpro_id":"IPR000271","interpro_name":"Ribosomal protein L34","interpro_type":"Family","locations":[{"end":100,"score":3.300000037447892e-18,"start":59}],"model":"PF00468","name":"Ribosomal protein L34"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14503","interpro_id":"IPR000271","interpro_name":"Ribosomal protein L34","interpro_type":"Family","locations":[{"end":100,"score":9.300000277257664e-14,"start":42}],"model":"PTHR14503:SF4","name":"MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01030","interpro_id":"IPR000271","interpro_name":"Ribosomal protein L34","interpro_type":"Family","locations":[{"end":99,"score":8.60000005237227e-14,"start":61}],"model":"TIGR01030","name":"50S ribosomal protein L34"}],"location":{"chromosome_name":"supercont5.1","end_pos":3235649,"start_pos":3235347,"strand":"forward"},"low_complexity_region_coords":[[82,96]],"name":"mrx14","ortholog_annotations":[{"gene_uniquename":"SJAG_00497","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14488","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00497","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00497","ortholog_taxonid":4932,"ortholog_uniquename":"YDR115W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L34","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0005198","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005739":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00497.1"],"transcripts_by_uniquename":{"SJAG_00497.1":null},"uniprot_identifier":"B6JVS9","uniquename":"SJAG_00497"}


id: SJAG_00498
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102889],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[102890],"is_not":false,"summary":null,"term":"GO:1903241"}],"cellular_component":[{"annotations":[102884],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[102885],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102886],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[102887],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[102888],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[102891],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[102892],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR000690","InterPro:IPR036236","EnsemblGenomes-Tr:EEB05481","EnsemblGenomes-Gn:SJAG_00498","GOA:B6JVT0","InterPro:IPR031781","UniProtKB/TrEMBL:B6JVT0","InterPro:IPR003604"],"deletion_viability":"unknown","disordered_region_coords":[[20,23],[79,93]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"},{"name":"oaa1","uniquename":"SJAG_00493"},{"name":"rib7","uniquename":"SJAG_00491"}],"genes_by_uniquename":{"HGNC:10766":null,"SJAG_00498":null,"SPBC21C3.05":null,"YDL043C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.2690","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":218,"score":2.0999999588841404e-36,"start":100}],"model":"4dgwC00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":93,"score":0.00003300000025774352,"start":47}],"model":"2mknA00","name":"Classic Zinc Finger"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12874","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":78,"score":1.6000000186977559e-6,"start":54}],"model":"PF12874","name":"Zinc-finger of C2H2 type"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16835","interpro_id":"IPR031781","interpro_name":"SF3A2 domain","interpro_type":"Domain","locations":[{"end":210,"score":5.0000000900125474e-36,"start":119}],"model":"PF16835","name":"Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50171","interpro_id":"IPR000690","interpro_name":"Matrin/U1-C, C2H2-type zinc finger","interpro_type":"Domain","locations":[{"end":84,"score":0.0,"start":54}],"model":"PS50171","name":"Zinc finger matrin-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23205","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":218,"score":0.0,"start":1}],"model":"PTHR23205:SF0","name":"SPLICING FACTOR 3A SUBUNIT 2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00451","interpro_id":"IPR003604","interpro_name":"Matrin/U1-C-like, C2H2-type zinc finger","interpro_type":"Domain","locations":[{"end":85,"score":2.499999936844688e-6,"start":51}],"model":"SM00451","name":"U1-like zinc finger"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01050","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":218,"score":3.799999971432829e-16,"start":107}],"model":"SM01050","name":"Cactus-binding C-terminus of cactin protein"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57667","interpro_id":"IPR036236","interpro_name":"Zinc finger C2H2 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":86,"score":0.000028200000087963417,"start":48}],"model":"0053677","name":"beta-beta-alpha zinc fingers"}],"location":{"chromosome_name":"supercont5.1","end_pos":3235029,"start_pos":3234235,"strand":"reverse"},"low_complexity_region_coords":[[6,18],[24,36],[94,111]],"name":"sap62","ortholog_annotations":[{"gene_uniquename":"SJAG_00498","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10766","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00498","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00498","ortholog_taxonid":4932,"ortholog_uniquename":"YDL043C","reference_uniquename":"PMID:29761456"}],"product":"U2 snRNP-associated protein Sap62","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0065003","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005634":null,"GO:0005686":null,"GO:0005829":null,"GO:0008270":null,"GO:0045292":null,"GO:0071004":null,"GO:0071013":null,"GO:1903241":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00498.1"],"transcripts_by_uniquename":{"SJAG_00498.1":null},"uniprot_identifier":"B6JVT0","uniquename":"SJAG_00498"}


id: SJAG_00499
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102894],"is_not":false,"summary":null,"term":"GO:0106217"}],"molecular_function":[{"annotations":[102895],"is_not":false,"summary":null,"term":"GO:0052735"}]},"dbxrefs":["InterPro:IPR026113","GOA:B6JVT2","EnsemblGenomes-Tr:EEB05483","InterPro:IPR029063","UniProtKB/TrEMBL:B6JVT2","EnsemblGenomes-Gn:SJAG_00499"],"deletion_viability":"unknown","disordered_region_coords":[[1,4],[7,8]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"},{"name":"car2","uniquename":"SJAG_00495"}],"genes_by_uniquename":{"HGNC:18272":null,"HGNC:25755":null,"HGNC:25856":null,"SJAG_00499":null,"SPBC21C3.07c":null,"YOR239W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.150","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":303,"score":2.1999998866057475e-28,"start":29}],"model":"3lccA00","name":"Vaccinia Virus protein VP39"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13489","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":265,"score":1.1999999620013451e-14,"start":100}],"model":"PF13489","name":"Methyltransferase domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF037755","interpro_id":"IPR026113","interpro_name":"tRNA N(3)-methylcytidine methyltransferase METTL2/6/8-like","interpro_type":"Family","locations":[{"end":305,"score":0.0,"start":3}],"model":"PIRSF037755","name":"Predicted methyltransferase, METTL2 type"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22809","interpro_id":"IPR026113","interpro_name":"tRNA N(3)-methylcytidine methyltransferase METTL2/6/8-like","interpro_type":"Family","locations":[{"end":303,"score":0.0,"start":34}],"model":"PTHR22809:SF11","name":"METHYLTRANSFERASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53335","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":300,"score":1.3396413318945251e-42,"start":72}],"model":"0047211","name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02440","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":221,"score":1.7588000500445844e-10,"start":113}],"model":"cd02440","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3233528,"start_pos":3232418,"strand":"forward"},"low_complexity_region_coords":[[278,289]],"name":"trm140","ortholog_annotations":[{"gene_uniquename":"SJAG_00499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18272","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25755","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00499","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25856","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00499","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00499","ortholog_taxonid":4932,"ortholog_uniquename":"YOR239W","reference_uniquename":"PMID:29761456"}],"product":"tRNA (cytosine-3) methyltransferase Trm140","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016741","GO:0140101","GO:0140098","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0052735":null,"GO:0106217":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00499.1"],"transcripts_by_uniquename":{"SJAG_00499.1":null},"uniprot_identifier":"B6JVT2","uniquename":"SJAG_00499"}


id: SJAG_00500
data:
  {"coiled_coil_coords":[[852,872]],"cv_annotations":{"biological_process":[{"annotations":[61462],"is_not":false,"summary":null,"term":"GO:0006338"},{"annotations":[112805],"is_not":false,"summary":null,"term":"GO:0006289"},{"annotations":[112807],"is_not":false,"summary":null,"term":"GO:0000720"}],"cellular_component":[{"annotations":[112801],"is_not":false,"summary":null,"term":"GO:0000109"},{"annotations":[112803],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[112809],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[112811],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[112813],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[112815],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[112817],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[112819],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001650","GOA:B6JVT3","InterPro:IPR017907","InterPro:IPR018957","InterPro:IPR038718","EnsemblGenomes-Gn:SJAG_00500","InterPro:IPR000330","InterPro:IPR027417","InterPro:IPR001841","InterPro:IPR014001","UniProtKB/TrEMBL:B6JVT3","InterPro:IPR013083","EnsemblGenomes-Tr:EEB05484"],"deletion_viability":"unknown","disordered_region_coords":[[27,189],[191,199],[201,204],[216,219],[226,241],[1,10]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"},{"name":"cqd1","uniquename":"SJAG_00496"}],"genes_by_uniquename":{"SJAG_00500":null,"SPCC330.01c":null,"YBR114W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":709,"score":3.7999998703242e-9,"start":634}],"model":"4tkpB00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10810","interpro_id":"IPR038718","interpro_name":"SNF2-like, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":564,"score":0.0,"start":267}],"model":"3mwyW03","name":"Tandem AAA-ATPase domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":895,"score":0.0,"start":565}],"model":"3mwyW04","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00097","interpro_id":"IPR018957","interpro_name":"Zinc finger, C3HC4 RING-type","interpro_type":"Domain","locations":[{"end":683,"score":6.8999997893115506e-6,"start":642}],"model":"PF00097","name":"Zinc finger, C3HC4 type (RING finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00176","interpro_id":"IPR000330","interpro_name":"SNF2, N-terminal","interpro_type":"Domain","locations":[{"end":624,"score":0.0,"start":292}],"model":"PF00176","name":"SNF2-related domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":839,"score":5.899999862583535e-14,"start":725}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00518","interpro_id":"IPR017907","interpro_name":"Zinc finger, RING-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":666,"score":0.0,"start":657}],"model":"PS00518","name":"Zinc finger RING-type signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":683,"score":0.0,"start":642}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":477,"score":0.0,"start":304}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":878,"score":0.0,"start":729}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45626","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":894,"score":0.0,"start":46}],"model":"PTHR45626:SF12","name":"TRANSCRIPTION TERMINATION FACTOR 2-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00184","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":683,"score":6.799999937356915e-6,"start":642}],"model":"SM00184","name":"Ring finger"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":495,"score":1.399999953402364e-25,"start":287}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal","interpro_type":"Domain","locations":[{"end":839,"score":2.100000023830477e-18,"start":756}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":549,"score":5.044674471569341e-44,"start":274},{"end":894,"score":0.0,"start":557}],"model":"0051486","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":696,"score":7.069999696362322e-14,"start":629}],"model":"0049212","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16567","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":687,"score":3.960930129403165e-21,"start":640}],"model":"cd16567","name":"RING finger, HC subclass, found in Saccharomyces cerevisiae DNA repair protein RAD16, Schizosaccharomyces pombe rhp16, and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18008","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":549,"score":0.0,"start":291}],"model":"cd18008","name":"DEXH-box helicase domain of SHPRH-like proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18793","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":850,"score":0.0,"start":723}],"model":"cd18793","name":"C-terminal helicase domain of the SNF family helicases"}],"location":{"chromosome_name":"supercont5.1","end_pos":3228241,"start_pos":3225490,"strand":"forward"},"low_complexity_region_coords":[[11,26],[563,569],[685,696]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00500","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC330.01c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00500","ortholog_taxonid":4932,"ortholog_uniquename":"YBR114W","reference_uniquename":"PMID:29761456"}],"product":"zinc finger, RING-type, Rad16-like","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0016746","GO:0016887","GO:0019787","GO:0006325","GO:0140097","GO:0140096","GO:0005634","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000109":null,"GO:0000720":null,"GO:0003677":null,"GO:0005524":null,"GO:0005634":null,"GO:0006289":null,"GO:0006338":null,"GO:0008270":null,"GO:0016887":null,"GO:0061630":null,"GO:0140658":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00500.1"],"transcripts_by_uniquename":{"SJAG_00500.1":null},"uniprot_identifier":"B6JVT3","uniquename":"SJAG_00500"}


id: SJAG_00501
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92501],"is_not":false,"summary":null,"term":"GO:0009052"}],"cellular_component":[{"annotations":[92499],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92500],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92502],"is_not":false,"summary":null,"term":"GO:0004750"},{"annotations":[92503],"is_not":false,"summary":null,"term":"GO:0046872"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05485","GOA:B6JVT4","InterPro:IPR026019","InterPro:IPR011060","UniProtKB/TrEMBL:B6JVT4","InterPro:IPR013785","InterPro:IPR000056","EnsemblGenomes-Gn:SJAG_00501"],"deletion_viability":"unknown","disordered_region_coords":[[229,230]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"},{"name":"mrx14","uniquename":"SJAG_00497"}],"genes_by_uniquename":{"HGNC:10293":null,"SJAG_00501":null,"SPAC31G5.05c":null,"YJL121C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.20.20.70","interpro_id":"IPR013785","interpro_name":"Aldolase-type TIM barrel","interpro_type":"Homologous_superfamily","locations":[{"end":225,"score":0.0,"start":2}],"model":"3ovpB00","name":"Aldolase class I"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_02227","interpro_id":"IPR026019","interpro_name":"Ribulose-phosphate 3-epimerase","interpro_type":"Family","locations":[{"end":216,"score":0.0,"start":3}],"model":"MF_02227","name":"Ribulose-phosphate 3-epimerase [rpe]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00834","interpro_id":"IPR000056","interpro_name":"Ribulose-phosphate 3-epimerase-like","interpro_type":"Family","locations":[{"end":201,"score":0.0,"start":5}],"model":"PF00834","name":"Ribulose-phosphate 3 epimerase family"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001461","interpro_id":"IPR026019","interpro_name":"Ribulose-phosphate 3-epimerase","interpro_type":"Family","locations":[{"end":226,"score":0.0,"start":1}],"model":"PIRSF001461","name":"Ribulose-phosphate 3-epimerase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01086","interpro_id":"IPR000056","interpro_name":"Ribulose-phosphate 3-epimerase-like","interpro_type":"Family","locations":[{"end":160,"score":0.0,"start":138}],"model":"PS01086","name":"Ribulose-phosphate 3-epimerase family signature 2"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11749","interpro_id":"IPR000056","interpro_name":"Ribulose-phosphate 3-epimerase-like","interpro_type":"Family","locations":[{"end":221,"score":0.0,"start":4}],"model":"PTHR11749:SF3","name":"RIBULOSE-5-PHOSPHATE-3-EPIMERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51366","interpro_id":"IPR011060","interpro_name":"Ribulose-phosphate binding barrel","interpro_type":"Homologous_superfamily","locations":[{"end":216,"score":0.0,"start":3}],"model":"0049675","name":"Ribulose-phoshate binding barrel"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01163","interpro_id":"IPR026019","interpro_name":"Ribulose-phosphate 3-epimerase","interpro_type":"Family","locations":[{"end":214,"score":0.0,"start":5}],"model":"TIGR01163","name":"ribulose-phosphate 3-epimerase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00429","interpro_id":"IPR000056","interpro_name":"Ribulose-phosphate 3-epimerase-like","interpro_type":"Family","locations":[{"end":214,"score":0.0,"start":5}],"model":"cd00429","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3224080,"start_pos":3223388,"strand":"reverse"},"low_complexity_region_coords":[[186,200]],"name":"rpe1","ortholog_annotations":[{"gene_uniquename":"SJAG_00501","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10293","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00501","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC31G5.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00501","ortholog_taxonid":4932,"ortholog_uniquename":"YJL121C","reference_uniquename":"PMID:29761456"}],"product":"ribulose phosphate 3-epimerase Rpe1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0055086","GO:0016853","GO:0006091","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004750":null,"GO:0005634":null,"GO:0005829":null,"GO:0009052":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00501.1"],"transcripts_by_uniquename":{"SJAG_00501.1":null},"uniprot_identifier":"B6JVT4","uniquename":"SJAG_00501"}


id: SJAG_00502
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92491],"is_not":false,"summary":null,"term":"GO:0006102"},{"annotations":[92492],"is_not":false,"summary":null,"term":"GO:0009085"},{"annotations":[92493],"is_not":false,"summary":null,"term":"GO:0019878"},{"annotations":[92494],"is_not":false,"summary":null,"term":"GO:0006099"}],"cellular_component":[{"annotations":[92489],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[92490],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[92495],"is_not":false,"summary":null,"term":"GO:0047046"},{"annotations":[92496],"is_not":false,"summary":null,"term":"GO:0004449"},{"annotations":[92497],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[92498],"is_not":false,"summary":null,"term":"GO:0051287"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00502","GOA:B6JVT5","EnsemblGenomes-Tr:EEB05486","InterPro:IPR024084","UniProtKB/TrEMBL:B6JVT5","InterPro:IPR019818"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"},{"name":"sap62","uniquename":"SJAG_00498"}],"genes_by_uniquename":{"SJAG_00502":null,"SPAC31G5.04":null,"YIL094C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.718.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":361,"score":0.0,"start":1}],"model":"3ty4B00","name":"Isopropylmalate Dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00180","interpro_id":"IPR024084","interpro_name":"Isopropylmalate dehydrogenase-like domain","interpro_type":"Domain","locations":[{"end":356,"score":0.0,"start":10}],"model":"PF00180","name":"Isocitrate/isopropylmalate dehydrogenase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00470","interpro_id":"IPR019818","interpro_name":"Isocitrate/isopropylmalate dehydrogenase, conserved site","interpro_type":"Conserved_site","locations":[{"end":271,"score":0.0,"start":252}],"model":"PS00470","name":"Isocitrate and isopropylmalate dehydrogenases signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11835","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":360,"score":0.0,"start":9}],"model":"PTHR11835:SF48","name":"DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01329","interpro_id":"IPR024084","interpro_name":"Isopropylmalate dehydrogenase-like domain","interpro_type":"Domain","locations":[{"end":356,"score":0.0,"start":8}],"model":"SM01329","name":"Isocitrate/isopropylmalate dehydrogenase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53659","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":360,"score":0.0,"start":6}],"model":"0048724","name":"Isocitrate/Isopropylmalate dehydrogenase-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3223177,"start_pos":3222092,"strand":"forward"},"name":"lys12","ortholog_annotations":[{"gene_uniquename":"SJAG_00502","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC31G5.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00502","ortholog_taxonid":4932,"ortholog_uniquename":"YIL094C","reference_uniquename":"PMID:29761456"}],"product":"homoisocitrate dehydrogenase Lys12","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006520","GO:0016491","GO:0005739","GO:0006091"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0004449":null,"GO:0005737":null,"GO:0005739":null,"GO:0006099":null,"GO:0006102":null,"GO:0009085":null,"GO:0019878":null,"GO:0047046":null,"GO:0051287":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00502.1"],"transcripts_by_uniquename":{"SJAG_00502.1":null},"uniprot_identifier":"B6JVT5","uniquename":"SJAG_00502"}


id: SJAG_00503
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85113,92482],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[85115,92484],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[92476],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85111,92478],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[92480],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[85117,92486],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[85119,92488],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6JVT6","InterPro:IPR028333","EnsemblGenomes-Gn:SJAG_00503","InterPro:IPR032440","InterPro:IPR019979","UniProtKB/TrEMBL:B6JVT6","EnsemblGenomes-Tr:EEB05487","InterPro:IPR012340","InterPro:IPR000266"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"},{"name":"trm140","uniquename":"SJAG_00499"},{"uniquename":"SJAG_05188"}],"genes_by_uniquename":{"HGNC:10384":null,"SJAG_00503":null,"SPAC144.11":null,"SPAC31G5.03":null,"YBR048W":null,"YDR025W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.1000","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":153,"score":0.0,"start":1}],"model":"5optX00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00366","interpro_id":"IPR000266","interpro_name":"Ribosomal protein S17/S11","interpro_type":"Family","locations":[{"end":138,"score":1.2999999439370891e-28,"start":71}],"model":"PF00366","name":"Ribosomal protein S17"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16205","interpro_id":"IPR032440","interpro_name":"40S ribosomal protein S11, N-terminal","interpro_type":"Domain","locations":[{"end":69,"score":2.500000007927692e-30,"start":8}],"model":"PF16205","name":"Ribosomal_S17 N-terminal"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00973","interpro_id":"IPR000266","interpro_name":"Ribosomal protein S17/S11","interpro_type":"Family","locations":[{"end":108,"score":3.99999992980668e-14,"start":85},{"end":128,"score":3.99999992980668e-14,"start":118},{"end":135,"score":3.99999992980668e-14,"start":128}],"model":"PR00973","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00056","interpro_id":"IPR019979","interpro_name":"Ribosomal protein S17, conserved site","interpro_type":"Conserved_site","locations":[{"end":130,"score":0.0,"start":118}],"model":"PS00056","name":"Ribosomal protein S17 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10744","interpro_id":"IPR000266","interpro_name":"Ribosomal protein S17/S11","interpro_type":"Family","locations":[{"end":145,"score":0.0,"start":14}],"model":"PTHR10744:SF9","name":"40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50249","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":144,"score":1.4599999444444614e-29,"start":65}],"model":"0037626","name":"Nucleic acid-binding proteins"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR03630","interpro_id":"IPR028333","interpro_name":"Ribosomal protein S17, archaeal/eukaryotic","interpro_type":"Family","locations":[{"end":140,"score":6.000000142453368e-33,"start":52}],"model":"TIGR03630","name":"30S ribosomal protein S17"}],"location":{"chromosome_name":"supercont5.1","end_pos":3221757,"start_pos":3221296,"strand":"forward"},"name":"rps11a","ortholog_annotations":[{"gene_uniquename":"SJAG_00503","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10384","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00503","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC144.11","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_00503","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC31G5.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00503","ortholog_taxonid":4932,"ortholog_uniquename":"YBR048W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00503","ortholog_taxonid":4932,"ortholog_uniquename":"YDR025W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0005829","GO:0022626","GO:0005634","GO:0002181","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005634":null,"GO:0005829":null,"GO:0019843":null,"GO:0022627":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00503.1"],"transcripts_by_uniquename":{"SJAG_00503.1":null},"uniprot_identifier":"B6JVT6","uniquename":"SJAG_00503"}


id: SJAG_00504
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92467],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[92468],"is_not":false,"summary":null,"term":"GO:0000398"},{"annotations":[92469],"is_not":false,"summary":null,"term":"GO:0048026"}],"cellular_component":[{"annotations":[92463],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92464],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92465],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[92466],"is_not":false,"summary":null,"term":"GO:0071004"}],"molecular_function":[{"annotations":[92470],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00504","GOA:B6JVT8","InterPro:IPR034159","UniProtKB/TrEMBL:B6JVT8","InterPro:IPR000504","InterPro:IPR012677","InterPro:IPR035979","EnsemblGenomes-Tr:EEB05489"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[8,9],[12,13],[59,61],[64,77],[171,173],[222,223],[284,290]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"},{"uniquename":"SJAG_00500"}],"genes_by_uniquename":{"HGNC:10771":null,"SJAG_00504":null,"SPAC31G5.01":null,"YOR319W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.330","interpro_id":"IPR012677","interpro_name":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":58,"score":1.000000013351432e-10,"start":2},{"end":177,"score":4.600000156943991e-22,"start":59}],"model":"5lslA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00076","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":56,"score":2.4000000848900527e-6,"start":12},{"end":157,"score":4.2000001634662394e-15,"start":87}],"model":"PF00076","name":"RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50102","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":55,"score":0.0,"start":10},{"end":163,"score":0.0,"start":85}],"model":"PS50102","name":"Eukaryotic RNA Recognition Motif (RRM) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48030","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":190,"score":0.0,"start":2}],"model":"PTHR48030:SF3","name":"SPLICING FACTOR 3B SUBUNIT 4"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00360","interpro_id":"IPR000504","interpro_name":"RNA recognition motif domain","interpro_type":"Domain","locations":[{"end":74,"score":0.003800000064074993,"start":11},{"end":159,"score":1.2999999623640945e-16,"start":86}],"model":"SM00360","name":"RNA recognition motif"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54928","interpro_id":"IPR035979","interpro_name":"RNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":166,"score":1.2899999902198558e-32,"start":9}],"model":"0049769","name":"RNA-binding domain, RBD"}],"location":{"chromosome_name":"supercont5.1","end_pos":3220163,"start_pos":3219161,"strand":"forward"},"low_complexity_region_coords":[[174,185],[192,218],[219,244],[245,283]],"name":"sap49","ortholog_annotations":[{"gene_uniquename":"SJAG_00504","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10771","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00504","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC31G5.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00504","ortholog_taxonid":4932,"ortholog_uniquename":"YOR319W","reference_uniquename":"PMID:29761456"}],"product":"U2 snRNP-associated RNA-binding protein Sap49","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016071","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000398":null,"GO:0003723":null,"GO:0005634":null,"GO:0005686":null,"GO:0005829":null,"GO:0045292":null,"GO:0048026":null,"GO:0071004":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00504.1"],"transcripts_by_uniquename":{"SJAG_00504.1":null},"uniprot_identifier":"B6JVT8","uniquename":"SJAG_00504"}


id: SJAG_00505
data:
  {"coiled_coil_coords":[[127,154]],"cv_annotations":{"biological_process":[{"annotations":[93645],"is_not":false,"summary":null,"term":"GO:0007017"},{"annotations":[93646],"is_not":false,"summary":null,"term":"GO:0006457"},{"annotations":[93647],"is_not":false,"summary":null,"term":"GO:0007021"}],"cellular_component":[{"annotations":[93642],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93643],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93644],"is_not":false,"summary":null,"term":"GO:0016272"}]},"dbxrefs":["InterPro:IPR004127","InterPro:IPR009053","InterPro:IPR016655","UniProtKB/TrEMBL:B6JVT9","EnsemblGenomes-Gn:SJAG_00505","EnsemblGenomes-Tr:EEB05490","GOA:B6JVT9"],"deletion_viability":"unknown","disordered_region_coords":[[1,4]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"},{"name":"rpe1","uniquename":"SJAG_00501"}],"genes_by_uniquename":{"HGNC:12662":null,"SJAG_00505":null,"SPAC3H8.07c":null,"YGR078C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.370","interpro_id":"IPR009053","interpro_name":"Prefoldin","interpro_type":"Homologous_superfamily","locations":[{"end":164,"score":5.199999775748357e-28,"start":21}],"model":"2zdiC00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02996","interpro_id":"IPR004127","interpro_name":"Prefoldin alpha-like","interpro_type":"Family","locations":[{"end":161,"score":1.8000000574296898e-31,"start":41}],"model":"PF02996","name":"Prefoldin subunit"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF016396","interpro_id":"IPR016655","interpro_name":"Prefoldin subunit 3","interpro_type":"Family","locations":[{"end":170,"score":0.0,"start":1}],"model":"PIRSF016396","name":"Prefoldin, subunit 3"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12409","interpro_id":"IPR016655","interpro_name":"Prefoldin subunit 3","interpro_type":"Family","locations":[{"end":170,"score":0.0,"start":4}],"model":"PTHR12409:SF0","name":"PREFOLDIN SUBUNIT 3"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46579","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":157,"score":4.840000169522556e-22,"start":30}],"model":"0037832","name":"Prefoldin"}],"location":{"chromosome_name":"supercont5.1","end_pos":3218392,"start_pos":3217713,"strand":"reverse"},"name":"pfd3","ortholog_annotations":[{"gene_uniquename":"SJAG_00505","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12662","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00505","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H8.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00505","ortholog_taxonid":4932,"ortholog_uniquename":"YGR078C","reference_uniquename":"PMID:29761456"}],"product":"prefoldin subunit Pfd3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006457","GO:0005634","GO:0051604","GO:0005829","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006457":null,"GO:0007017":null,"GO:0007021":null,"GO:0016272":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00505.1"],"transcripts_by_uniquename":{"SJAG_00505.1":null},"uniprot_identifier":"B6JVT9","uniquename":"SJAG_00505"}


id: SJAG_00506
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93639],"is_not":false,"summary":null,"term":"GO:0006673"},{"annotations":[93640],"is_not":false,"summary":null,"term":"GO:0030148"}],"cellular_component":[{"annotations":[93636],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[93637],"is_not":false,"summary":null,"term":"GO:0000139"},{"annotations":[93638],"is_not":false,"summary":null,"term":"GO:0070916"}],"molecular_function":[{"annotations":[93641],"is_not":false,"summary":null,"term":"GO:0045140"}]},"dbxrefs":["GOA:B6JVU0","InterPro:IPR026841","InterPro:IPR036938","InterPro:IPR000326","UniProtKB/TrEMBL:B6JVU0","EnsemblGenomes-Tr:EEB05491","EnsemblGenomes-Gn:SJAG_00506"],"deletion_viability":"unknown","disordered_region_coords":[[348,349],[393,419],[421,422]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"},{"name":"lys12","uniquename":"SJAG_00502"}],"genes_by_uniquename":{"SJAG_00506":null,"SPAC3H8.06":null,"YDR072C":null,"YKL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.144.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":330,"score":1.3999999737279722e-7,"start":237}],"model":"4px7A00","name":"Phosphatidic acid phosphatase type 2/haloperoxidase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14378","interpro_id":"IPR026841","interpro_name":"Inositolphosphotransferase Aur1/Ipt1","interpro_type":"Domain","locations":[{"end":313,"score":2.500000068113003e-28,"start":136}],"model":"PF14378","name":"PAP2 superfamily"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR31310","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":338,"score":0.0,"start":22}],"model":"PTHR31310:SF11","name":""},{"dbname":"SMART","evidence":"Smart scan","id":"SM00014","interpro_id":"IPR000326","interpro_name":"Phosphatidic acid phosphatase type 2/haloperoxidase","interpro_type":"Domain","locations":[{"end":316,"score":0.0012000000569969416,"start":179}],"model":"SM00014","name":"Acid phosphatase homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48317","interpro_id":"IPR036938","interpro_name":"Phosphatidic acid phosphatase type 2/haloperoxidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":321,"score":5.069999886586629e-8,"start":90}],"model":"0036249","name":"Acid phosphatase/Vanadium-dependent haloperoxidase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03386","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":316,"score":0.0,"start":124}],"model":"cd03386","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3217555,"start_pos":3216287,"strand":"forward"},"low_complexity_region_coords":[[85,87],[136,145],[354,367]],"name":"aur1","ortholog_annotations":[{"gene_uniquename":"SJAG_00506","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H8.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00506","ortholog_taxonid":4932,"ortholog_uniquename":"YDR072C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00506","ortholog_taxonid":4932,"ortholog_uniquename":"YKL004W","reference_uniquename":"PMID:29761456"}],"product":"inositol phosphorylceramide synthase Aur1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006629","GO:0016757","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0005794":null,"GO:0006673":null,"GO:0030148":null,"GO:0045140":null,"GO:0070916":null},"tm_domain_coords":[[46,68],[83,105],[118,140],[150,172],[185,207],[248,270],[277,299]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00506.1"],"transcripts_by_uniquename":{"SJAG_00506.1":null},"uniprot_identifier":"B6JVU0","uniquename":"SJAG_00506"}


id: SJAG_00507
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86074],"is_not":false,"summary":null,"term":"GO:0002183"},{"annotations":[86075],"is_not":false,"summary":null,"term":"GO:0000184"}],"cellular_component":[{"annotations":[86071],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[86072],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86073],"is_not":false,"summary":null,"term":"GO:0016281"}],"molecular_function":[{"annotations":[86076],"is_not":false,"summary":null,"term":"GO:0000340"},{"annotations":[86077],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_00507","InterPro:IPR019770","InterPro:IPR023398","UniProtKB/TrEMBL:B6JVU1","EnsemblGenomes-Tr:EEB05492","GOA:B6JVU1","InterPro:IPR001040"],"deletion_viability":"unknown","disordered_region_coords":[[1,17],[223,228],[233,242]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"},{"name":"rps11a","uniquename":"SJAG_00503"}],"genes_by_uniquename":{"HGNC:3287":null,"HGNC:33179":null,"SJAG_00507":null,"SPAC16E8.15":null,"YOL139C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.760.10","interpro_id":"IPR023398","interpro_name":"Translation Initiation factor eIF- 4e-like","interpro_type":"Homologous_superfamily","locations":[{"end":242,"score":0.0,"start":19}],"model":"6fc0A00","name":"RNA Cap, Translation Initiation Factor Eif4e"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01652","interpro_id":"IPR001040","interpro_name":"Translation Initiation factor eIF- 4e","interpro_type":"Family","locations":[{"end":222,"score":1.3998971658604923e-42,"start":36}],"model":"PF01652","name":"Eukaryotic initiation factor 4E"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00813","interpro_id":"IPR019770","interpro_name":"Eukaryotic translation initiation factor 4E (eIF-4E), conserved site","interpro_type":"Conserved_site","locations":[{"end":112,"score":0.0,"start":89}],"model":"PS00813","name":"Eukaryotic initiation factor 4E signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11960","interpro_id":"IPR001040","interpro_name":"Translation Initiation factor eIF- 4e","interpro_type":"Family","locations":[{"end":231,"score":4.7994472403124985e-42,"start":8}],"model":"PTHR11960:SF68","name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55418","interpro_id":"IPR023398","interpro_name":"Translation Initiation factor eIF- 4e-like","interpro_type":"Homologous_superfamily","locations":[{"end":237,"score":0.0,"start":11}],"model":"0049154","name":"eIF4e-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":3215440,"start_pos":3214472,"strand":"forward"},"low_complexity_region_coords":[[141,160]],"name":"tif45","ortholog_annotations":[{"gene_uniquename":"SJAG_00507","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3287","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00507","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33179","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00507","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00507","ortholog_taxonid":4932,"ortholog_uniquename":"YOL139C","reference_uniquename":"PMID:29761456"}],"product":"translation initiation factor eIF4E, 4F complex subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0002181","GO:0005829","GO:0010494","GO:0016071","GO:0045182"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000184":null,"GO:0000340":null,"GO:0002183":null,"GO:0003743":null,"GO:0005829":null,"GO:0010494":null,"GO:0016281":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00507.1"],"transcripts_by_uniquename":{"SJAG_00507.1":null},"uniprot_identifier":"B6JVU1","uniquename":"SJAG_00507"}


id: SJAG_00508
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86069],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[86068],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[86070],"is_not":false,"summary":null,"term":"GO:0071885"}]},"dbxrefs":["InterPro:IPR008576","EnsemblGenomes-Gn:SJAG_00508","InterPro:IPR029063","EnsemblGenomes-Tr:EEB05493","UniProtKB/TrEMBL:B6JVU2","GOA:B6JVU2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"},{"name":"rot1","uniquename":"SJAG_05189"}],"genes_by_uniquename":{"HGNC:23373":null,"HGNC:31932":null,"SJAG_00508":null,"SPAC16E8.14c":null,"YBR261C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.150","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":215,"score":0.0,"start":1}],"model":"6dubB00","name":"Vaccinia Virus protein VP39"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05891","interpro_id":"IPR008576","interpro_name":"Alpha-N-methyltransferase NTM1","interpro_type":"Family","locations":[{"end":214,"score":0.0,"start":4}],"model":"PF05891","name":"AdoMet dependent proline di-methyltransferase"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF016958","interpro_id":"IPR008576","interpro_name":"Alpha-N-methyltransferase NTM1","interpro_type":"Family","locations":[{"end":219,"score":0.0,"start":1}],"model":"PIRSF016958","name":"Predicted S-adenosyl-L-methionine dependent methyltransferase, AD-003 type"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12753","interpro_id":"IPR008576","interpro_name":"Alpha-N-methyltransferase NTM1","interpro_type":"Family","locations":[{"end":214,"score":0.0,"start":3}],"model":"PTHR12753:SF0","name":"AD-003 - RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53335","interpro_id":"IPR029063","interpro_name":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":213,"score":4.1400001066369397e-38,"start":4}],"model":"0052536","name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd02440","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":158,"score":0.0000401836987293791,"start":62}],"model":"cd02440","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3214457,"start_pos":3213342,"strand":"reverse"},"name":"tae1","ortholog_annotations":[{"gene_uniquename":"SJAG_00508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23373","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00508","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:31932","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00508","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00508","ortholog_taxonid":4932,"ortholog_uniquename":"YBR261C","reference_uniquename":"PMID:29761456"}],"product":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0002181","GO:0008276","GO:0005829","GO:0140096","GO:0016741"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0005829":null,"GO:0071885":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00508.1"],"transcripts_by_uniquename":{"SJAG_00508.1":null},"uniprot_identifier":"B6JVU2","uniquename":"SJAG_00508"}


id: SJAG_00509
data:
  {"coiled_coil_coords":[[367,387],[414,441],[449,476]],"cv_annotations":{"biological_process":[{"annotations":[86065],"is_not":false,"summary":null,"term":"GO:0023051"}],"cellular_component":[{"annotations":[86064],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[86066],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[86067],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR001607","EnsemblGenomes-Tr:EEB05494","EnsemblGenomes-Gn:SJAG_00509","InterPro:IPR011422","GOA:B6JVU3","InterPro:IPR001841","InterPro:IPR013083","UniProtKB/TrEMBL:B6JVU3"],"deletion_viability":"unknown","disordered_region_coords":[[179,189],[326,346],[381,382],[388,412],[414,437],[460,470],[477,478],[523,522],[481,505]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"},{"name":"sap49","uniquename":"SJAG_00504"}],"genes_by_uniquename":{"HGNC:1099":null,"SJAG_00509":null,"SPAC16E8.13":null,"YHL010C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":238,"score":2.4000000209412065e-8,"start":196},{"end":314,"score":3.2999999960888615e-17,"start":239}],"model":"1iymA00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02148","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":314,"score":1.800000020426123e-18,"start":255}],"model":"PF02148","name":"Zn-finger in ubiquitin-hydrolases and other protein"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07576","interpro_id":"IPR011422","interpro_name":"BRCA1-associated 2/ETP1, RRM","interpro_type":"Domain","locations":[{"end":176,"score":2.5999999706289806e-30,"start":85}],"model":"PF07576","name":"BRCA1-associated protein 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF13639","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":241,"score":4.999999987376214e-7,"start":200}],"model":"PF13639","name":"Ring finger domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":241,"score":0.0,"start":201}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50271","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":331,"score":0.0,"start":235}],"model":"PS50271","name":"Zinc finger UBP-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24007","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":519,"score":0.0,"start":59}],"model":"PTHR24007:SF7","name":"BRCA1-ASSOCIATED PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00184","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":240,"score":0.000019999999494757503,"start":201}],"model":"SM00184","name":"Ring finger"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00290","interpro_id":"IPR001607","interpro_name":"Zinc finger, UBP-type","interpro_type":"Domain","locations":[{"end":303,"score":1.7999999428779406e-21,"start":254}],"model":"SM00290","name":"Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":246,"score":1.4600000028397453e-11,"start":200},{"end":318,"score":8.949999943168367e-23,"start":235}],"model":"0050087","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12717","interpro_id":"IPR034931","interpro_name":"ETP1, RNA recognition motif","interpro_type":"Domain","locations":[{"end":169,"score":2.980790077112755e-36,"start":87}],"model":"cd12717","name":"RNA recognition motif (RRM) found in yeast RING finger protein ETP1 and similar proteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16457","interpro_id":"IPR047243","interpro_name":"BRCA1-associated protein, RING finger, H2 subclass","interpro_type":"Domain","locations":[{"end":242,"score":2.100709966548003e-25,"start":199}],"model":"cd16457","name":"RING finger, H2 subclass, found in BRCA1-associated protein (BRAP2) and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":3213212,"start_pos":3211644,"strand":"forward"},"low_complexity_region_coords":[[506,522]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00509","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1099","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00509","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00509","ortholog_taxonid":4932,"ortholog_uniquename":"YHL010C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin-protein ligase E3, human BRAP ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016746","GO:0019787","GO:0140096","GO:0005829","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0008270":null,"GO:0023051":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00509.1"],"transcripts_by_uniquename":{"SJAG_00509.1":null},"uniprot_identifier":"B6JVU3","uniquename":"SJAG_00509"}


id: SJAG_00510
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[58580],"is_not":false,"summary":null,"term":"GO:0000785"}]},"dbxrefs":["InterPro:IPR011011","InterPro:IPR013083","UniProtKB/TrEMBL:B6JVU4","InterPro:IPR019786","EnsemblGenomes-Gn:SJAG_00510","InterPro:IPR001965","EnsemblGenomes-Tr:EEB05495","InterPro:IPR028651","GOA:B6JVU4","InterPro:IPR019787"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[120,124],[128,133],[172,186],[154,157]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"},{"name":"pfd3","uniquename":"SJAG_00505"}],"genes_by_uniquename":{"SJAG_00510":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":245,"score":8.3999999881193e-14,"start":158}],"model":"1weuA00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS01359","interpro_id":"IPR019786","interpro_name":"Zinc finger, PHD-type, conserved site","interpro_type":"Conserved_site","locations":[{"end":241,"score":0.0,"start":198}],"model":"PS01359","name":"Zinc finger PHD-type signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50016","interpro_id":"IPR019787","interpro_name":"Zinc finger, PHD-finger","interpro_type":"Domain","locations":[{"end":244,"score":0.0,"start":195}],"model":"PS50016","name":"Zinc finger PHD-type profile"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00249","interpro_id":"IPR001965","interpro_name":"Zinc finger, PHD-type","interpro_type":"Domain","locations":[{"end":242,"score":3.5999998999614036e-6,"start":197}],"model":"SM00249","name":"PHD zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57903","interpro_id":"IPR011011","interpro_name":"Zinc finger, FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":243,"score":1.0900000283061654e-14,"start":188}],"model":"0050473","name":"FYVE/PHD zinc finger"}],"location":{"chromosome_name":"supercont5.1","end_pos":3210641,"start_pos":3209625,"strand":"reverse"},"low_complexity_region_coords":[[134,152],[158,171]],"product":"ING family zinc finger, PHD-type","references_by_uniquename":{"GO_REF:0000117":null},"subset_termids":["GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00510.1"],"transcripts_by_uniquename":{"SJAG_00510.1":null},"uniprot_identifier":"B6JVU4","uniquename":"SJAG_00510"}


id: SJAG_00511
data:
  {"coiled_coil_coords":[[65,85]],"cv_annotations":{},"dbxrefs":["InterPro:IPR036322","EnsemblGenomes-Tr:EEB05496","InterPro:IPR015943","GOA:B6JVU5","EnsemblGenomes-Gn:SJAG_00511","InterPro:IPR006594","InterPro:IPR019775","InterPro:IPR001680","InterPro:IPR017986","InterPro:IPR020472","InterPro:IPR037190","UniProtKB/TrEMBL:B6JVU5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"},{"name":"aur1","uniquename":"SJAG_00506"}],"genes_by_uniquename":{"SJAG_00511":null,"YOR269W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.960.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":92,"score":2.000000033724767e-16,"start":1}],"model":"1uujB00","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":439,"score":0.0,"start":107}],"model":"1vyhC01","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":141,"score":0.00003199999991920777,"start":109},{"end":189,"score":0.0020000000949949026,"start":149},{"end":235,"score":5.700000201613875e-6,"start":196},{"end":343,"score":0.024000000208616257,"start":289},{"end":385,"score":5.900000044078979e-9,"start":347}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00320","interpro_id":"IPR020472","interpro_name":"G-protein beta WD-40 repeat","interpro_type":"Repeat","locations":[{"end":142,"score":3.199999909497819e-8,"start":128},{"end":190,"score":3.199999909497819e-8,"start":176},{"end":236,"score":3.199999909497819e-8,"start":222}],"model":"PR00320","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00678","interpro_id":"IPR019775","interpro_name":"WD40 repeat, conserved site","interpro_type":"Conserved_site","locations":[{"end":190,"score":0.0,"start":176},{"end":236,"score":0.0,"start":222}],"model":"PS00678","name":"Trp-Asp (WD) repeats signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":150,"score":0.0,"start":109},{"end":198,"score":0.0,"start":151},{"end":244,"score":0.0,"start":200},{"end":352,"score":0.0,"start":329},{"end":394,"score":0.0,"start":353}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":141,"score":0.0,"start":109},{"end":240,"score":0.0,"start":200},{"end":387,"score":0.0,"start":353}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50896","interpro_id":"IPR006594","interpro_name":"LIS1 homology motif","interpro_type":"Domain","locations":[{"end":40,"score":0.0,"start":8}],"model":"PS50896","name":"LIS1 homology (LisH) motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR44129","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":392,"score":0.0,"start":45}],"model":"PTHR44129:SF13","name":"WD REPEAT-CONTAINING PROTEIN POP1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":141,"score":9.999999974752427e-7,"start":102},{"end":189,"score":0.00006800000119255856,"start":144},{"end":235,"score":4.799999828719592e-7,"start":193},{"end":278,"score":0.023000000044703484,"start":238},{"end":343,"score":1.399999976158142,"start":282},{"end":385,"score":3.90000011452063e-12,"start":346},{"end":437,"score":2.799999952316284,"start":388}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF109925","interpro_id":"IPR037190","interpro_name":"LIS1, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":82,"score":4.179999987634353e-13,"start":3}],"model":"0044528","name":"Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":436,"score":0.0,"start":100}],"model":"0053623","name":"WD40 repeat-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":437,"score":0.0,"start":108}],"model":"cd00200","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":3209376,"start_pos":3207942,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_00511","ortholog_taxonid":4932,"ortholog_uniquename":"YOR269W","reference_uniquename":"PMID:26896847"}],"product":"Lis1 homology and WD repeat protein","references_by_uniquename":{"PMID:26896847":null},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00511.1"],"transcripts_by_uniquename":{"SJAG_00511.1":null},"uniprot_identifier":"B6JVU5","uniquename":"SJAG_00511"}


id: SJAG_00512
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86060],"is_not":false,"summary":null,"term":"GO:0006289"},{"annotations":[86061],"is_not":false,"summary":null,"term":"GO:0006360"},{"annotations":[86062],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[86055],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[86056],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86057],"is_not":false,"summary":null,"term":"GO:0000112"},{"annotations":[86058],"is_not":false,"summary":null,"term":"GO:0000439"},{"annotations":[86059],"is_not":false,"summary":null,"term":"GO:0005675"}],"molecular_function":[{"annotations":[86063],"is_not":false,"summary":null,"term":"GO:0016251"}]},"dbxrefs":["GOA:B6JVU6","EnsemblGenomes-Gn:SJAG_00512","UniProtKB/TrEMBL:B6JVU6","EnsemblGenomes-Tr:EEB05497","InterPro:IPR013876","InterPro:IPR005607","InterPro:IPR027079","InterPro:IPR011993"],"deletion_viability":"unknown","disordered_region_coords":[[74,78],[88,92],[98,99],[101,113],[115,118],[178,179],[339,341],[374,375],[427,429],[433,435],[468,472],[500,501]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"},{"name":"tif45","uniquename":"SJAG_00507"}],"genes_by_uniquename":{"HGNC:4655":null,"SJAG_00512":null,"SPAC16E8.11c":null,"YDR311W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":104,"score":5.800000219836814e-22,"start":4}],"model":"1y5oA00","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.140.1200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":160,"score":2.4000000848900527e-6,"start":120}],"model":"2diiA01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03909","interpro_id":"IPR005607","interpro_name":"BSD domain","interpro_type":"Domain","locations":[{"end":171,"score":2.6999999458432455e-12,"start":116},{"end":243,"score":2.399999921021134e-10,"start":188}],"model":"PF03909","name":"BSD domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08567","interpro_id":"IPR013876","interpro_name":"TFIIH p62 subunit, N-terminal","interpro_type":"Domain","locations":[{"end":95,"score":1.5000000170217692e-18,"start":11}],"model":"PF08567","name":"TFIIH p62 subunit, N-terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50858","interpro_id":"IPR005607","interpro_name":"BSD domain","interpro_type":"Domain","locations":[{"end":166,"score":0.0,"start":113},{"end":238,"score":0.0,"start":187}],"model":"PS50858","name":"BSD domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12856","interpro_id":"IPR027079","interpro_name":"TFIIH subunit Tfb1/GTF2H1","interpro_type":"Family","locations":[{"end":521,"score":0.0,"start":9}],"model":"PTHR12856:SF0","name":"TRANSCRIPTION INITIATION FACTOR IIH-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00751","interpro_id":"IPR005607","interpro_name":"BSD domain","interpro_type":"Domain","locations":[{"end":166,"score":1.1000000021965661e-8,"start":113},{"end":238,"score":3.6000000723512837e-12,"start":187}],"model":"SM00751","name":"domain in transcription factors and synapse-associated proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF140383","interpro_id":"IPR035925","interpro_name":"BSD domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":162,"score":7.59000015615463e-11,"start":119}],"model":"0052439","name":"BSD domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":103,"score":3.869999938864227e-15,"start":6}],"model":"0051204","name":"PH domain-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13229","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":100,"score":5.490489790246911e-13,"start":11}],"model":"cd13229","name":"Transcription Factor II H (TFIIH) Pleckstrin homology (PH) domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3207680,"start_pos":3205844,"strand":"reverse"},"name":"tfb1","ortholog_annotations":[{"gene_uniquename":"SJAG_00512","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4655","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00512","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00512","ortholog_taxonid":4932,"ortholog_uniquename":"YDR311W","reference_uniquename":"PMID:29761456"}],"product":"transcription factor TFIIH complex subunit Tfb1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006281","GO:0006351","GO:0140223","GO:0005634","GO:0005829","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000112":null,"GO:0000439":null,"GO:0005675":null,"GO:0005737":null,"GO:0005829":null,"GO:0006289":null,"GO:0006360":null,"GO:0006367":null,"GO:0016251":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00512.1"],"transcripts_by_uniquename":{"SJAG_00512.1":null},"uniprot_identifier":"B6JVU6","uniquename":"SJAG_00512"}


id: SJAG_00513
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86050],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[86051],"is_not":false,"summary":null,"term":"GO:0000028"}],"cellular_component":[{"annotations":[86048],"is_not":false,"summary":null,"term":"GO:0005763"},{"annotations":[86049],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[86052],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[86053],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[86054],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6JVU7","EnsemblGenomes-Tr:EEB05498","InterPro:IPR023798","InterPro:IPR000235","InterPro:IPR036823","EnsemblGenomes-Gn:SJAG_00513","UniProtKB/TrEMBL:B6JVU7"],"deletion_viability":"unknown","disordered_region_coords":[[72,76],[79,102],[184,189]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"},{"name":"tae1","uniquename":"SJAG_00508"}],"genes_by_uniquename":{"HGNC:14499":null,"SJAG_00513":null,"SPAC16E8.10c":null,"YJR113C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.455.10","interpro_id":"IPR036823","interpro_name":"Ribosomal protein S7 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":255,"score":2.799934461567417e-41,"start":103}],"model":"5mmjg00","name":"Ribosomal protein S7 domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00177","interpro_id":"IPR023798","interpro_name":"Ribosomal protein S7 domain","interpro_type":"Domain","locations":[{"end":249,"score":1.0000000180025095e-35,"start":113}],"model":"PF00177","name":"Ribosomal protein S7p/S5e"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11205","interpro_id":"IPR000235","interpro_name":"Ribosomal protein S5/S7","interpro_type":"Family","locations":[{"end":248,"score":3.6999998504363515e-26,"start":98}],"model":"PTHR11205:SF19","name":"RIBOSOMAL PROTEIN S7"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47973","interpro_id":"IPR036823","interpro_name":"Ribosomal protein S7 domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":252,"score":3.0100031143543503e-40,"start":107}],"model":"0054590","name":"Ribosomal protein S7"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14868","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":249,"score":0.0,"start":112}],"model":"cd14868","name":"Fungal Mitochondrial homolog of Ribosomal Protein S7"}],"location":{"chromosome_name":"supercont5.1","end_pos":3205589,"start_pos":3204768,"strand":"reverse"},"name":"rsm7","ortholog_annotations":[{"gene_uniquename":"SJAG_00513","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14499","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00513","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00513","ortholog_taxonid":4932,"ortholog_uniquename":"YJR113C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140053","GO:0005739","GO:0005198","GO:0042254","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000028":null,"GO:0003729":null,"GO:0003735":null,"GO:0005739":null,"GO:0005763":null,"GO:0019843":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00513.1"],"transcripts_by_uniquename":{"SJAG_00513.1":null},"uniprot_identifier":"B6JVU7","uniquename":"SJAG_00513"}


id: SJAG_00514
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"}},"coiled_coil_coords":[[365,380]],"cv_annotations":{"biological_process":[{"annotations":[86035],"is_not":false,"summary":null,"term":"GO:0051519"},{"annotations":[115430],"is_not":false,"summary":null,"term":"GO:0061171"},{"annotations":[86036],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[86037],"is_not":false,"summary":null,"term":"GO:0061245"},{"annotations":[86038],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[86039],"is_not":false,"summary":null,"term":"GO:1902917"},{"annotations":[86040],"is_not":false,"summary":null,"term":"GO:0140281"},{"annotations":[86041],"is_not":false,"summary":null,"term":"GO:0031137"},{"annotations":[86042],"is_not":false,"summary":null,"term":"GO:0032955"},{"annotations":[86043],"is_not":false,"summary":null,"term":"GO:0030100"},{"annotations":[86044],"is_not":false,"summary":null,"term":"GO:0060236"},{"annotations":[86045],"is_not":false,"summary":null,"term":"GO:0031106"}],"cellular_component":[{"annotations":[86021],"is_not":false,"summary":null,"term":"GO:0071521"},{"annotations":[86022],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[86023],"is_not":false,"summary":null,"term":"GO:1902716"},{"annotations":[86024],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[86025],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[86026],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[86027],"is_not":false,"summary":null,"term":"GO:0090726"},{"annotations":[86028],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86029],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[86030],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[86031],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[86032],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86033],"is_not":false,"summary":null,"term":"GO:0031520"},{"annotations":[86034],"is_not":false,"summary":null,"term":"GO:0030427"}],"molecular_function":[{"annotations":[86046],"is_not":false,"summary":null,"term":"GO:0005085"},{"annotations":[86047],"is_not":false,"summary":null,"term":"GO:0008289"}],"single_locus_phenotype":[{"annotations":[115353],"is_not":false,"summary":null,"term":"FYPO:0007789"},{"annotations":[115413],"is_not":false,"summary":null,"term":"FYPO:0004105"},{"annotations":[115355],"is_not":false,"summary":null,"term":"FYPO:0001355"},{"annotations":[115414],"is_not":false,"summary":null,"term":"FYPO:0001234"},{"annotations":[115356],"is_not":false,"summary":null,"term":"FYPO:0000280"},{"annotations":[115354],"is_not":false,"summary":null,"term":"FYPO:0002380"}]},"dbxrefs":["InterPro:IPR011993","InterPro:IPR033511","InterPro:IPR000270","InterPro:IPR010481","EnsemblGenomes-Gn:SJAG_00514","InterPro:IPR000219","InterPro:IPR001849","UniProtKB/TrEMBL:B6JVU8","EnsemblGenomes-Tr:EEB05499","InterPro:IPR035899","GOA:B6JVU8"],"deletion_viability":"viable","disordered_region_coords":[[2,4],[28,36],[38,39],[536,538],[571,588],[603,605],[610,658],[660,671],[681,685],[714,731],[529,528],[540,560],[688,701]],"feature_publications":[{"reference_uniquename":"PMID:30664646","source":"canto"},{"reference_uniquename":"PMID:29566183","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"},{"uniquename":"SJAG_00509"}],"genes_by_uniquename":{"SJAG_00514":null,"SPAC16E8.09":null,"YAL041W":null},"genotypes_by_uniquename":{"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.900.10","interpro_id":"IPR035899","interpro_name":"Dbl homology (DH) domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":313,"score":1.2000000467046398e-16,"start":219},{"end":371,"score":1.60000000580399e-14,"start":314}],"model":"4gouA03","name":"Dbl homology (DH) domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":522,"score":6.899999982980497e-22,"start":372}],"model":"5d3xB00","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.20.90","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":839,"score":1.3000000492180588e-18,"start":756}],"model":"2kfjA00","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00564","interpro_id":"IPR000270","interpro_name":"PB1 domain","interpro_type":"Domain","locations":[{"end":836,"score":1.4000000160899195e-12,"start":759}],"model":"PF00564","name":"PB1 domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00621","interpro_id":"IPR000219","interpro_name":"Dbl homology (DH) domain","interpro_type":"Domain","locations":[{"end":308,"score":8.699999921868429e-12,"start":226},{"end":364,"score":2.099999951710174e-9,"start":317}],"model":"PF00621","name":"RhoGEF domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06395","interpro_id":"IPR010481","interpro_name":"Cdc24/Scd1, N-terminal","interpro_type":"Domain","locations":[{"end":191,"score":8.699999824884242e-25,"start":102}],"model":"PF06395","name":"CDC24 Calponin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF15411","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":503,"score":3.100000110335105e-33,"start":393}],"model":"PF15411","name":"Pleckstrin homology domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50003","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":511,"score":0.0,"start":390}],"model":"PS50003","name":"PH domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50010","interpro_id":"IPR000219","interpro_name":"Dbl homology (DH) domain","interpro_type":"Domain","locations":[{"end":366,"score":0.0,"start":222}],"model":"PS50010","name":"Dbl homology (DH) domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51745","interpro_id":"IPR000270","interpro_name":"PB1 domain","interpro_type":"Domain","locations":[{"end":844,"score":0.0,"start":757}],"model":"PS51745","name":"PB1 domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47339","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":856,"score":0.0,"start":748}],"model":"PTHR47339:SF1","name":"CELL DIVISION CONTROL PROTEIN 24"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00233","interpro_id":"IPR001849","interpro_name":"Pleckstrin homology domain","interpro_type":"Domain","locations":[{"end":513,"score":0.00016999999934341758,"start":391}],"model":"SM00233","name":"Pleckstrin homology domain."},{"dbname":"SMART","evidence":"Smart scan","id":"SM00325","interpro_id":"IPR000219","interpro_name":"Dbl homology (DH) domain","interpro_type":"Domain","locations":[{"end":365,"score":9.90000031913883e-18,"start":226}],"model":"SM00325","name":"Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00666","interpro_id":"IPR000270","interpro_name":"PB1 domain","interpro_type":"Domain","locations":[{"end":858,"score":8.600000156455678e-10,"start":759}],"model":"SM00666","name":"PB1 domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48065","interpro_id":"IPR035899","interpro_name":"Dbl homology (DH) domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":387,"score":3.659999925266081e-34,"start":215}],"model":"0044151","name":"DBL homology domain (DH-domain)"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":512,"score":7.989999852165547e-16,"start":374}],"model":"0036336","name":"PH domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54277","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":835,"score":5.609999837179365e-14,"start":756}],"model":"0048864","name":"CAD & PB1 domains"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00160","interpro_id":"IPR000219","interpro_name":"Dbl homology (DH) domain","interpro_type":"Domain","locations":[{"end":364,"score":1.734929955938993e-25,"start":224}],"model":"cd00160","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05992","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":835,"score":8.286610286845075e-11,"start":760}],"model":"cd05992","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd13246","interpro_id":"IPR033511","interpro_name":"Rho guanine nucleotide exchange factor Cdc24/Scd1, PH domain","interpro_type":"Domain","locations":[{"end":503,"score":0.0,"start":368}],"model":"cd13246","name":"Shape and Conjugation Deficiency 1 Pleckstrin homology (PH) domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":3204477,"start_pos":3201229,"strand":"forward"},"low_complexity_region_coords":[[42,58],[365,373],[508,528],[529,535],[561,570],[702,713]],"name":"scd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00514","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00514","ortholog_taxonid":4932,"ortholog_uniquename":"YAL041W","reference_uniquename":"PMID:29761456"}],"product":"RhoGEF Scd1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29566183":null,"PMID:29761456":null,"PMID:30664646":null},"subset_termids":["GO:0008289","GO:0030234","GO:0015630","GO:0005886","FYPO:0000139","GO:0016192","FYPO:0001320","FYPO:0002058","GO:0000281","GO:0005829","GO:0005634","GO:0072686","GO:0023052","GO:0005085","GO:0007163","GO:0098772","GO:0000935","GO:0000747","GO:0005938","FYPO:0000005","FYPO:0000301","GO:0000226"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYPO:0000280":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0002380":null,"FYPO:0004105":null,"FYPO:0007789":null,"FYPO_EXT:0000001":null,"GO:0000935":null,"GO:0005085":null,"GO:0005634":null,"GO:0005829":null,"GO:0008289":null,"GO:0030010":null,"GO:0030100":null,"GO:0030427":null,"GO:0031106":null,"GO:0031137":null,"GO:0031520":null,"GO:0032153":null,"GO:0032154":null,"GO:0032955":null,"GO:0035556":null,"GO:0043332":null,"GO:0051285":null,"GO:0051286":null,"GO:0051519":null,"GO:0060236":null,"GO:0061171":null,"GO:0061245":null,"GO:0071521":null,"GO:0072686":null,"GO:0090726":null,"GO:0140281":null,"GO:1902716":null,"GO:1902917":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00514.1"],"transcripts_by_uniquename":{"SJAG_00514.1":null},"uniprot_identifier":"B6JVU8","uniquename":"SJAG_00514"}


id: SJAG_00516
data:
  {"coiled_coil_coords":[[110,130]],"cv_annotations":{"biological_process":[{"annotations":[86016],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[86017],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[86013],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[86014],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[86015],"is_not":false,"summary":null,"term":"GO:0000220"}],"molecular_function":[{"annotations":[86018],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[86019],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[73027],"is_not":false,"summary":null,"term":"GO:0051117"},{"annotations":[86020],"is_not":false,"summary":null,"term":"GO:0046961"}]},"dbxrefs":["GOA:B6JVU9","InterPro:IPR026028","EnsemblGenomes-Tr:EEB05500","EnsemblGenomes-Gn:SJAG_00516","InterPro:IPR002490","UniProtKB/TrEMBL:B6JVU9"],"deletion_viability":"unknown","disordered_region_coords":[[80,96],[160,161],[164,165],[171,177],[180,191]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"shd1","uniquename":"SJAG_00521"},{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"},{"uniquename":"SJAG_00511"},{"uniquename":"SJAG_00510"}],"genes_by_uniquename":{"HGNC:11647":null,"HGNC:18481":null,"HGNC:865":null,"HGNC:866":null,"SJAG_00516":null,"SPAC16E8.07c":null,"YMR054W":null,"YOR270C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01496","interpro_id":"IPR002490","interpro_name":"V-type ATPase, V0 complex, 116kDa subunit family","interpro_type":"Family","locations":[{"end":829,"score":0.0,"start":29}],"model":"PF01496","name":"V-type ATPase 116kDa subunit family"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF001293","interpro_id":"IPR026028","interpro_name":"ATPase, V0 complex, subunit 116kDa, eukaryotic","interpro_type":"Family","locations":[{"end":834,"score":0.0,"start":1}],"model":"PIRSF001293","name":"V-type proton ATPase 116 kda subunit a isoform 1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11629","interpro_id":"IPR002490","interpro_name":"V-type ATPase, V0 complex, 116kDa subunit family","interpro_type":"Family","locations":[{"end":831,"score":0.0,"start":4}],"model":"PTHR11629:SF63","name":"VACUOLAR PROTON ATPASES"}],"location":{"chromosome_name":"supercont5.1","end_pos":3199586,"start_pos":3196762,"strand":"reverse"},"low_complexity_region_coords":[[182,188],[445,456]],"name":"vph1","ortholog_annotations":[{"gene_uniquename":"SJAG_00516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11647","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18481","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:865","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:866","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":4932,"ortholog_uniquename":"YMR054W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_00516","ortholog_taxonid":4932,"ortholog_uniquename":"YOR270C","reference_uniquename":"PMID:29761456"}],"product":"V-type ATPase V0 subunit a","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005773","GO:0005783","GO:0016887","GO:0022857","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000220":null,"GO:0000329":null,"GO:0005524":null,"GO:0005783":null,"GO:0007035":null,"GO:0016887":null,"GO:0046961":null,"GO:0051117":null,"GO:1902600":null},"tm_domain_coords":[[432,454],[474,496],[555,577],[584,606],[650,672],[773,795]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00516.1"],"transcripts_by_uniquename":{"SJAG_00516.1":null},"uniprot_identifier":"B6JVU9","uniquename":"SJAG_00516"}


id: SJAG_00517
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB05502","EnsemblGenomes-Gn:SJAG_00517","UniProtKB/TrEMBL:B6JVV1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps5","uniquename":"SJAG_00523"},{"name":"odc1","uniquename":"SJAG_00522"},{"name":"shd1","uniquename":"SJAG_00521"},{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"},{"name":"tfb1","uniquename":"SJAG_00512"}],"genes_by_uniquename":{"SJAG_00517":null,"SPAC16E8.05c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":3194743,"start_pos":3194051,"strand":"reverse"},"low_complexity_region_coords":[[115,120]],"ortholog_annotations":[{"gene_uniquename":"SJAG_00517","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.05c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein Mde1","references_by_uniquename":{"PMID:21511999":null},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_00517.1"],"transcripts_by_uniquename":{"SJAG_00517.1":null},"uniprot_identifier":"B6JVV1","uniquename":"SJAG_00517"}


id: SJAG_00518
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86007],"is_not":false,"summary":null,"term":"GO:0009094"},{"annotations":[86008],"is_not":false,"summary":null,"term":"GO:0006571"}],"cellular_component":[{"annotations":[86005],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86006],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[86009],"is_not":false,"summary":null,"term":"GO:0004106"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JVV2","InterPro:IPR036263","InterPro:IPR008238","GOA:B6JVV2","EnsemblGenomes-Gn:SJAG_00518","InterPro:IPR037039","EnsemblGenomes-Tr:EEB05503"],"deletion_viability":"unknown","disordered_region_coords":[[213,214],[216,221]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pfd4","uniquename":"SJAG_00524"},{"name":"rps5","uniquename":"SJAG_00523"},{"name":"odc1","uniquename":"SJAG_00522"},{"name":"shd1","uniquename":"SJAG_00521"},{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"},{"name":"rsm7","uniquename":"SJAG_00513"}],"genes_by_uniquename":{"SJAG_00518":null,"SPAC16E8.04c":null,"YPR060C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.590.10","interpro_id":"IPR037039","interpro_name":"Chorismate mutase, AroQ class superfamily, eukaryotic","interpro_type":"Homologous_superfamily","locations":[{"end":256,"score":0.0,"start":5}],"model":"5csmA00","name":"Chorismate mutase, AroQ class superfamily, eukaryotic"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF017318","interpro_id":"IPR008238","interpro_name":"Chorismate mutase, AroQ class, eukaryotic type","interpro_type":"Family","locations":[{"end":256,"score":0.0,"start":1}],"model":"PIRSF017318","name":"Chorismate mutase of the AroQ class, eukaryotic type"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51169","interpro_id":"IPR008238","interpro_name":"Chorismate mutase, AroQ class, eukaryotic type","interpro_type":"Family","locations":[{"end":256,"score":0.0,"start":6}],"model":"PS51169","name":"Chorismate mutase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21145","interpro_id":"IPR008238","interpro_name":"Chorismate mutase, AroQ class, eukaryotic type","interpro_type":"Family","locations":[{"end":256,"score":0.0,"start":6}],"model":"PTHR21145:SF12","name":"CHORISMATE MUTASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48600","interpro_id":"IPR036263","interpro_name":"Chorismate mutase type II superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":256,"score":0.0,"start":6}],"model":"0045614","name":"Chorismate mutase II"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR01802","interpro_id":"IPR008238","interpro_name":"Chorismate mutase, AroQ class, eukaryotic type","interpro_type":"Family","locations":[{"end":256,"score":0.0,"start":14}],"model":"TIGR01802","name":"chorismate mutase"}],"location":{"chromosome_name":"supercont5.1","end_pos":3193328,"start_pos":3192505,"strand":"reverse"},"name":"aro7","ortholog_annotations":[{"gene_uniquename":"SJAG_00518","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00518","ortholog_taxonid":4932,"ortholog_uniquename":"YPR060C","reference_uniquename":"PMID:29761456"}],"product":"chorismate mutase Aro7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016853","GO:0006520","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004106":null,"GO:0005634":null,"GO:0005829":null,"GO:0006571":null,"GO:0009094":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00518.1"],"transcripts_by_uniquename":{"SJAG_00518.1":null},"uniprot_identifier":"B6JVV2","uniquename":"SJAG_00518"}


id: SJAG_00519
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86003],"is_not":false,"summary":null,"term":"GO:0046521"},{"annotations":[57736],"is_not":false,"summary":null,"term":"GO:0006048"}],"cellular_component":[{"annotations":[86001],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[86002],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[86004],"is_not":false,"summary":null,"term":"GO:0102672"},{"annotations":[69737],"is_not":false,"summary":null,"term":"GO:0004343"}]},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"yip5","uniquename":"SJAG_00525"},{"name":"pfd4","uniquename":"SJAG_00524"},{"name":"rps5","uniquename":"SJAG_00523"},{"name":"odc1","uniquename":"SJAG_00522"},{"name":"shd1","uniquename":"SJAG_00521"},{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"},{"name":"scd1","uniquename":"SJAG_00514"}],"genes_by_uniquename":{"SJAG_00519":null,"SPAC16E8.02":null,"YGL010W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.630.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":357,"score":9.99994610111476e-41,"start":206}],"model":"2o28A01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00583","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":357,"score":4.39999988890603e-15,"start":257}],"model":"PF00583","name":"Acetyltransferase (GNAT) family"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06127","interpro_id":"IPR009305","interpro_name":"2-hydroxy-palmitic acid dioxygenase Mpo1-like","interpro_type":"Family","locations":[{"end":166,"score":2.4999999206638063e-21,"start":7}],"model":"PF06127","name":"2-hydroxy-palmitic acid dioxygenase Mpo1-like"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51186","interpro_id":"IPR000182","interpro_name":"GNAT domain","interpro_type":"Domain","locations":[{"end":372,"score":0.0,"start":224}],"model":"PS51186","name":"Gcn5-related N-acetyltransferase (GNAT) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13355","interpro_id":"IPR039143","interpro_name":"Glucosamine 6-phosphate N-acetyltransferase","interpro_type":"Family","locations":[{"end":365,"score":1.401298464324817e-45,"start":213}],"model":"PTHR13355:SF11","name":"GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55729","interpro_id":"IPR016181","interpro_name":"Acyl-CoA N-acyltransferase","interpro_type":"Homologous_superfamily","locations":[{"end":369,"score":8.270000127095386e-25,"start":222}],"model":"0048084","name":"Acyl-CoA N-acyltransferases (Nat)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04301","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":344,"score":3.607960152862688e-8,"start":283}],"model":"cd04301","name":"N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate"}],"location":{"chromosome_name":"supercont5.1","end_pos":3192416,"start_pos":3191090,"strand":"forward"},"low_complexity_region_coords":[[78,92],[87,102],[231,238],[239,238]],"name":"mpo1","ortholog_annotations":[{"gene_uniquename":"SJAG_00519","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00519","ortholog_taxonid":4932,"ortholog_uniquename":"YGL010W","reference_uniquename":"PMID:29761456"}],"product":"ER membrane fatty acid alpha-oxygenase Mpo1/glucosamine-phosphate N-acetyltransferase Gna1, tandem fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055086","GO:0016746","GO:0005783","GO:0016491","GO:0006629","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004343":null,"GO:0005783":null,"GO:0005789":null,"GO:0006048":null,"GO:0046521":null,"GO:0102672":null},"tm_domain_coords":[[21,43],[58,80],[87,109],[148,170]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00519.1"],"transcripts_by_uniquename":{"SJAG_00519.1":null},"uniprot_identifier":"B6JVV3","uniquename":"SJAG_00519"}


id: SJAG_00521
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85997],"is_not":false,"summary":null,"term":"GO:0000147"},{"annotations":[85998],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[85999],"is_not":false,"summary":null,"term":"GO:0030833"}],"cellular_component":[{"annotations":[85991],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[85992],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[85993],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[85994],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[85995],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[85996],"is_not":false,"summary":null,"term":"GO:0005643"}],"molecular_function":[{"annotations":[86000],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[65195],"is_not":false,"summary":null,"term":"GO:0043130"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB05505","InterPro:IPR007131","InterPro:IPR036028","EnsemblGenomes-Gn:SJAG_00521","InterPro:IPR013761","UniProtKB/TrEMBL:B6JVV4","InterPro:IPR001452","InterPro:IPR029922","GOA:B6JVV4","InterPro:IPR038159","InterPro:IPR035800"],"deletion_viability":"unknown","disordered_region_coords":[[24,31],[70,71],[300,361],[368,370],[458,460],[466,480],[483,507],[596,595],[633,637],[639,641],[697,718],[752,765],[769,774],[779,969],[972,973],[984,1018],[1021,1030],[1035,1051],[1053,1092],[1094,1098],[1103,1122],[1124,1126],[1129,1134],[1136,1145],[1149,1153],[1156,1158],[1166,1170],[1223,1224],[1229,1232],[1234,1235],[1242,1248],[1265,1265],[1271,1273],[1283,1350],[155,154],[217,216],[272,271],[291,292],[561,579],[664,683],[1251,1252]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pab1","uniquename":"SJAG_00526"},{"name":"yip5","uniquename":"SJAG_00525"},{"name":"pfd4","uniquename":"SJAG_00524"},{"name":"rps5","uniquename":"SJAG_00523"},{"name":"odc1","uniquename":"SJAG_00522"},{"name":"shd1","uniquename":"SJAG_00521"},{"name":"mpo1","uniquename":"SJAG_00519"},{"name":"aro7","uniquename":"SJAG_00518"},{"uniquename":"SJAG_00517"},{"name":"nop12","uniquename":"SJAG_05190"},{"name":"vph1","uniquename":"SJAG_00516"}],"genes_by_uniquename":{"SJAG_00521":null,"SPAC16E8.01":null,"YBL007C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.150.50","interpro_id":"IPR013761","interpro_name":"Sterile alpha motif/pointed domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":789,"score":3.3999999678334235e-23,"start":724}],"model":"3idwA00","name":"Transcription Factor, Ets-1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":79,"score":5.899999998108807e-13,"start":8},{"end":161,"score":1.700000004049157e-13,"start":82},{"end":565,"score":7.59999981051676e-17,"start":509}],"model":"2oawA00","name":"SH3 Domains"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.700","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":665,"score":3.000000157232057e-23,"start":602}],"model":"2hbpA00","name":"SLA1 homology domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00018","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":560,"score":2.6000000763470865e-12,"start":515}],"model":"PF00018","name":"SH3 domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03983","interpro_id":"IPR007131","interpro_name":"SLA1 homology domain 1, SHD1","interpro_type":"Domain","locations":[{"end":661,"score":1.5000000047566153e-30,"start":599}],"model":"PF03983","name":"SLA1 homology domain 1, SHD1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14604","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":134,"score":2.2999999682582484e-9,"start":87}],"model":"PF14604","name":"Variant SH3 domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50002","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":81,"score":0.0,"start":5},{"end":139,"score":0.0,"start":82},{"end":568,"score":0.0,"start":508}],"model":"PS50002","name":"Src homology 3 (SH3) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15735","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":896,"score":0.0,"start":8}],"model":"PTHR15735:SF19","name":"FCH AND DOUBLE SH3 DOMAINS PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00326","interpro_id":"IPR001452","interpro_name":"SH3 domain","interpro_type":"Domain","locations":[{"end":80,"score":1.9999999920083944e-12,"start":8},{"end":138,"score":1.6999999630229468e-8,"start":83},{"end":567,"score":4.0999999831089888e-16,"start":511}],"model":"SM00326","name":"Src homology 3 domains"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50044","interpro_id":"IPR036028","interpro_name":"SH3-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":81,"score":1.7099999801567511e-12,"start":7},{"end":141,"score":1.100000014578155e-13,"start":85},{"end":592,"score":3.2800000510072788e-18,"start":507}],"model":"0041374","name":"SH3-domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd11773","interpro_id":"IPR035800","interpro_name":"Sla1, first SH3 domain","interpro_type":"Domain","locations":[{"end":75,"score":3.493409909010181e-20,"start":9}],"model":"cd11773","name":"First Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p"}],"location":{"chromosome_name":"supercont5.1","end_pos":3190458,"start_pos":3186312,"strand":"forward"},"low_complexity_region_coords":[[138,154],[155,216],[217,271],[272,290],[293,299],[580,595],[684,696],[1173,1184],[1214,1225],[1226,1233],[1237,1241],[1253,1264]],"name":"shd1","ortholog_annotations":[{"gene_uniquename":"SJAG_00521","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC16E8.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_00521","ortholog_taxonid":4932,"ortholog_uniquename":"YBL007C","reference_uniquename":"PMID:29761456"}],"product":"cytoskeletal protein binding protein Sla1 family, Shd1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0015629","GO:0005643","GO:0005829","GO:0030036","GO:0005938","GO:0031410","GO:0030479","GO:0060090","GO:0005634","GO:0005768","GO:0016192","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000147":null,"GO:0005643":null,"GO:0005768":null,"GO:0005829":null,"GO:0006897":null,"GO:0030479":null,"GO:0030674":null,"GO:0030833":null,"GO:0032153":null,"GO:0043130":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_00521.1"],"transcripts_by_uniquename":{"SJAG_00521.1":null},"uniprot_identifier":"B6JVV4","uniquename":"SJAG_00521"}


