# terms

id: PBO:0089037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding","termid":"PBO:0089037"}


id: GO:1904865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"positively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"activation of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"activation of beta-catenin-TCF complex formation","type":"narrow"},{"name":"activation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"activation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"activation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"activation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"positive regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"positive regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"positive regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"upregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"upregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"upregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"upregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"upregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904865"}


id: GO:2001221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G2 phase of mitotic cell cycle (obsolete GO:2001221)","synonyms":[{"name":"positive regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001221"}


id: GO:0031645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nervous system process","synonyms":[{"name":"down regulation of neurological process","type":"exact"},{"name":"down-regulation of neurological process","type":"exact"},{"name":"downregulation of neurological process","type":"exact"},{"name":"inhibition of neurological process","type":"narrow"},{"name":"negative regulation of neurological process","type":"exact"},{"name":"negative regulation of neurological system process","type":"exact"},{"name":"negative regulation of neurophysiological process","type":"exact"}],"termid":"GO:0031645"}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["GOC:mah","PMID:820855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"limonene monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0019113"}


id: PBO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDIL3 divergent transcript","termid":"PBO:0045796"}


id: GO:0102059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + 2 isopentenyl diphosphate = 2 diphosphate + (2Z,6Z)-farnesyl diphosphate.","definition_xrefs":["GOC:pz","RHEA:27810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"2-cis,6-cis-farnesyl pyrophosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-11973","GO:0102192","MetaCyc:RXN-10481","EC:2.5.1.92"],"synonyms":[{"name":"neryl-diphosphate:isopentenyl-diphosphate cistransferase activity","type":"narrow"}],"termid":"GO:0102059"}


id: GO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.","definition_xrefs":["ISBN:0781735149","PMID:16102575","PMID:16166509","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors","termid":"GO:0002200"}


id: GO:0016550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place during or after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete insertion or deletion editing (obsolete GO:0016550)","synonyms":[{"name":"insertion or deletion editing","type":"exact"},{"name":"insertion/deletion editing","type":"exact"}],"termid":"GO:0016550"}


id: FYPO:0001529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased GTP binding","synonyms":[{"name":"reduced GTP binding","type":"exact"}],"termid":"FYPO:0001529"}


id: GO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hormone secretion","synonyms":[{"name":"activation of hormone secretion","type":"narrow"},{"name":"stimulation of hormone secretion","type":"narrow"},{"name":"up regulation of hormone secretion","type":"exact"},{"name":"up-regulation of hormone secretion","type":"exact"},{"name":"upregulation of hormone secretion","type":"exact"}],"termid":"GO:0046887"}


id: GO:1902904
data:
  {"annotated_genes":["SJAG_04703","SJAG_00279","SJAG_01943","SJAG_03455","SJAG_04982","SJAG_02700","SJAG_01993","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110419,88651,84450,95023,114690,88467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[87033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[93861,110422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:23921388","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"negatively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03455":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fibril organisation","type":"related"},{"name":"down regulation of fibril organization","type":"related"},{"name":"down-regulation of fibril organisation","type":"related"},{"name":"down-regulation of fibril organization","type":"related"},{"name":"downregulation of fibril organisation","type":"related"},{"name":"downregulation of fibril organization","type":"related"},{"name":"inhibition of fibril organisation","type":"narrow"},{"name":"inhibition of fibril organization","type":"narrow"},{"name":"negative regulation of fibril organisation","type":"related"}],"termid":"GO:1902904","terms_by_termid":{"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0021879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:16226447","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron differentiation","termid":"GO:0021879"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["GOC:dgh","PMID:17009929","PMID:20144998","GOC:cilia","GOC:kmv","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0009434","GO:0031512"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: FYPO:0002711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the haploid nuclei formed by meiotic nuclear division do not separate normally. Nuclei may be closer together than normal, or remain attached by an incompletely separated outer nuclear membrane, or both.","definition_xrefs":["PMID:1417417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abnormal nuclear separation after meiosis","synonyms":[{"name":"abnormal nuclear distribution after meiosis","type":"exact"},{"name":"abnormal nuclear separation after meiotic nuclear division","type":"exact"},{"name":"abnormal nuclear separation during sporulation","type":"related"},{"name":"abnormal nuclear separation in ascus","type":"exact"},{"name":"abnormal separation of nuclei in ascus","type":"exact"}],"termid":"FYPO:0002711"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["OMSSA:94","PubMed:3467339","Unimod:47#S","RESID:AA0080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: PBO:0062603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily P member 1","termid":"PBO:0062603"}


id: PBO:0075452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 4","termid":"PBO:0075452"}


id: GO:0150094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by cell surface receptor-mediated endocytosis, followed by intracellular degradation.","definition_xrefs":["PMID:18289866","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance by cellular catabolic process","synonyms":[{"name":"amyloid-beta clearance by phagocytosis","type":"narrow"}],"termid":"GO:0150094"}


id: PBO:0054995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2410","termid":"PBO:0054995"}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: PBO:0028139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_small_ribosomal_subunit_level","termid":"PBO:0028139"}


id: PBO:0090779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop100","termid":"PBO:0090779"}


id: GO:0106048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylspermadine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine deacetylation","termid":"GO:0106047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine deacetylation","synonyms":[{"name":"N8-acetylspermidine deacetylation","type":"exact"}],"termid":"GO:0106048"}


id: PBO:0040990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2B","termid":"PBO:0040990"}


id: PBO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc24","termid":"PBO:0018007"}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:17078044","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: PBO:0084155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity S-methylmethionine permease; required for utilization of S-methylmethionine as a sulfur source; has similarity to S-adenosylmethionine permease Sam3p","termid":"PBO:0084155"}


id: PBO:0067293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 378, pseudogene","termid":"PBO:0067293"}


id: PBO:0061925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily H member 1 pseudogene","termid":"PBO:0061925"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["PMID:12083798","PMID:16624291","Wikipedia:Bleb_(cell_biology)","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: PBO:0087556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Mtc1p, along with Rtc1p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; relative distribution to the vacuolar membrane decreases upon DNA replication stress","termid":"PBO:0087556"}


id: GO:0072670
data:
  {"annotated_genes":["SJAG_00865","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110342,114668],"is_not":false,"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in mitochondrial tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["GOC:mcc","PMID:21183954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine modification","termid":"GO:0002949"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial tRNA t6A modification","type":"exact"}],"termid":"GO:0072670","terms_by_termid":{"GO:0072670":null}}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: PBO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family protein","termid":"PBO:0000155"}


id: FYPO:0007543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which double-stranded DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"abolished double-stranded DNA binding","synonyms":[{"name":"abolished dsDNA binding","type":"exact"},{"name":"double-stranded DNA binding abolished","type":"exact"}],"termid":"FYPO:0007543"}


id: GO:0042125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a galactose molecule to a protein amino acid.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein galactosylation","synonyms":[{"name":"protein amino acid galactosylation","type":"exact"}],"termid":"GO:0042125"}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["EC:3.3.2.7","MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["RHEA:16665","Reactome:R-HSA-2161949"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: GO:1904438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:kom","GOC:TermGenie","PMID:18353247","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0098771","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903989"],"synonyms":[{"name":"regulation of ferrous ion import into cell","type":"related"},{"name":"regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"regulation of ferrous iron import into cell","type":"related"}],"termid":"GO:1904438"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_00154","SJAG_00612","SJAG_04697","SJAG_04162","SJAG_01960","SJAG_00339","SJAG_00760","SJAG_04328","SJAG_03503","SJAG_04325","SJAG_03334","SJAG_03452","SJAG_00434","SJAG_01177","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[107009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[103679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[89473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[111244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[89038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[95422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[111653,108482,84561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: FYPO:0003446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of SRP-dependent cotranslational protein targeting to the ER membrane is decreased.","definition_xrefs":["GO:0006614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased SRP-dependent cotranslational protein targeting to membrane during vegetative growth","synonyms":[{"name":"decreased SRP-dependent cotranslational protein targeting to membrane during mitotic cell cycle","type":"related"},{"name":"reduced SRP-dependent cotranslational protein targeting to membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0003446"}


id: SO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site to which a polypeptide will bind with a zinc finger motif, which is characterized by requiring one or more Zinc 2+ ions for stabilized folding.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc_finger_binding_site","synonyms":[{"name":"zinc finger binding site","type":"exact"},{"name":"zinc_fing","type":"exact"}],"termid":"SO:0001971"}


id: GO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the urogenital tract.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in urogenital tract","termid":"GO:0002425"}


id: PBO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid permease Per1","termid":"PBO:0002213"}


id: GO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the ectoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"ectoderm formation","termid":"GO:0001705"},{"relation_name":"part_of","term_name":"ectodermal cell differentiation","termid":"GO:0010668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate commitment","synonyms":[{"name":"ectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001712"}


id: PBO:0048692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 1","termid":"PBO:0048692"}


id: PBO:0083613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-like GTPase that mediates homotypic ER fusion; has a role in ER morphology; interacts physically and genetically with Yop1p and Rtn1p; functional ortholog of the human atlastin ATL1, defects in which cause a form of the human disease hereditary spastic paraplegia; homolog of Arabidopsis RHD3","termid":"PBO:0083613"}


id: PBO:0064844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 13B","termid":"PBO:0064844"}


id: GO:0110122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a myotube cell from one site to another, often during the development of a multicellular organism. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate, and fuse.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell migration","termid":"GO:0110122"}


id: GO:0005500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone, a sesquiterpenoid derivative that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"juvenile hormone binding","termid":"GO:0005500"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: GO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a glucocorticoid hormone stimulus is received by a cell and converted into a molecular signal. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"detection of steroid hormone stimulus","termid":"GO:0051467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucocorticoid hormone stimulus","termid":"GO:0051468"}


id: PBO:0054458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1855","termid":"PBO:0054458"}


id: GO:1905912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:rph","PMID:22362515","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion export across plasma membrane","synonyms":[{"name":"regulation of calcium ion efflux from cell","type":"exact"},{"name":"regulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905912"}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: GO:1990020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Axon collateral that ramifies in the area of the soma of the cell of origin.","definition_xrefs":["NIF_Subcellular:sao1642494436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"recurrent axon collateral","synonyms":[{"name":"recurrent collateral","type":"broad"}],"termid":"GO:1990020"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["PomBase:mah","GO:0033597","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: PBO:0053706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 908","termid":"PBO:0053706"}


id: PBO:0059843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1","termid":"PBO:0059843"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: PR:O13952
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnl2 gene.","definition_xrefs":["UniProtKB:O13952","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere-localized protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.11c","synonyms":[{"name":"Spom972h-cnl2","type":"exact"}],"termid":"PR:O13952"}


id: FYPO:0004891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation lasts for a longer time than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may persist longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein modification during vegetative growth","termid":"FYPO:0000548"},{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"prolonged histone H2A phosphorylation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004891"}


id: GO:1901170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphthalene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:11133965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"naphthalene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:naph","GO:0018931"],"synonyms":[{"name":"naphthalene breakdown","type":"exact"},{"name":"naphthalene catabolism","type":"exact"},{"name":"naphthalene degradation","type":"exact"},{"name":"naphthalene metabolic process","type":"related"},{"name":"naphthalene metabolism","type":"related"}],"termid":"GO:1901170"}


id: GO:0048734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the proboscis are generated and organized. The proboscis is the trunk-like extension of the mouthparts on the adult head.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"proboscis development","termid":"GO:0048728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis morphogenesis","termid":"GO:0048734"}


id: PBO:0064621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 1","termid":"PBO:0064621"}


id: GO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of the swim bladder by trapped gases. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"swim bladder maturation","termid":"GO:0048796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder inflation","synonyms":[{"name":"gas bladder inflation","type":"exact"}],"termid":"GO:0048798"}


id: PBO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 1","termid":"PBO:0047961"}


id: GO:1905387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16771696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to beta-carotene","synonyms":[{"name":"response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905387"}


id: GO:0031241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the outer membrane that faces the periplasm of the cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic side of cell outer membrane","synonyms":[{"name":"internal leaflet of cell outer membrane","type":"exact"},{"name":"internal side of cell outer membrane","type":"exact"},{"name":"internal side of outer membrane","type":"exact"}],"termid":"GO:0031241"}


id: PBO:0027941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_glucose_starvation","termid":"PBO:0027941"}


id: PBO:0003723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase Fba1","termid":"PBO:0003723"}


id: MOD:00455
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+6amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+6amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(6)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+6amu), N-term & K","type":"related"}],"termid":"MOD:00455"}


id: PBO:0067087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 123, pseudogene","termid":"PBO:0067087"}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: PBO:0047487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 2","termid":"PBO:0047487"}


id: PBO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC inhibitor Mes1","termid":"PBO:0033816"}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: GO:0034517
data:
  {"annotated_genes":["SJAG_04502","SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96100,109655],"is_not":false,"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The selective degradation of mature ribosomes by macroautophagy.","definition_xrefs":["PMID:18391941","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02663":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ribophagy","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034517","terms_by_termid":{"GO:0034517":null}}


id: PBO:0047843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase","termid":"PBO:0047843"}


id: PBO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 20A","termid":"PBO:0043303"}


id: PBO:0027851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication_during_replication_fork_arrest","termid":"PBO:0027851"}


id: PBO:0050073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMBOX1 intronic transcript 1","termid":"PBO:0050073"}


id: PBO:0083470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRR1","termid":"PBO:0083470"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: FYECO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which R-limonene was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ R-limonene","synonyms":[{"name":"+ (4R)-limonene","type":"exact"}],"termid":"FYECO:0000355"}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99361],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"4-hydroxy-3-all-trans-hexaprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-hexaprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:20361","PMID:21944752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: MOD:01423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a palmitoleyl group.","definition_xrefs":["Unimod:431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"palmitoleylated residue","termid":"MOD:01423"}


id: PBO:0028714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_premeiotic_DNA_replication","termid":"PBO:0028714"}


id: PBO:0049784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 19 pseudogene","termid":"PBO:0049784"}


id: PBO:0078885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-2","termid":"PBO:0078885"}


id: PBO:0003463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Mas5 (predicted)","termid":"PBO:0003463"}


id: PBO:0060770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 1","termid":"PBO:0060770"}


id: PBO:0003520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine-containing response regulator phosphotransferase Mpr1","termid":"PBO:0003520"}


id: PBO:0082733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; relieves transcriptional repression by binding to the Cyc8p-Tup1p corepressor and recruiting the SAGA complex to the repressed promoter; contains a PHD finger domain","termid":"PBO:0082733"}


id: PBO:0064877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 36","termid":"PBO:0064877"}


id: GO:0008559
data:
  {"annotated_genes":["SJAG_03363","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92209,114010],"is_not":false,"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).","definition_xrefs":["EC:7.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type xenobiotic transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008560","MetaCyc:3.6.3.44-RXN","GO:0005226","Reactome:R-HSA-9757139"],"synonyms":[{"name":"ATP phosphohydrolase (xenobiotic-exporting)","type":"related"},{"name":"ATP-dependent xenobiotic transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled xenobiotic transmembrane transporter activity","type":"related"},{"name":"MDR protein","type":"related"},{"name":"P-glycoprotein","type":"related"},{"name":"PDR protein","type":"related"},{"name":"multidrug resistance exporter","type":"related"},{"name":"multidrug-resistance protein","type":"related"},{"name":"pleiotropic-drug-resistance protein","type":"related"},{"name":"xenobiotic ABC transporter","type":"narrow"},{"name":"xenobiotic transmembrane transporting ATPase activity","type":"exact"}],"termid":"GO:0008559","terms_by_termid":{"GO:0008559":null}}


id: PBO:0066545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9","termid":"PBO:0066545"}


id: GO:0009579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:mtg_sensu","GOC:ds","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid","secondary_identifiers":["Wikipedia:Thylakoid"],"synonyms":[{"name":"photosynthetic membrane","type":"related"}],"termid":"GO:0009579"}


id: FYPO:0002689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cumene hydroperoxide. Cells stop growing (and may die) at a concentration of cumene hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to cumene hydroperoxide","synonyms":[{"name":"hypersensitive to cumene hydroperoxide","type":"exact"},{"name":"sensitive to cumene hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to cumene hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002689"}


id: GO:1902168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23516620","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to catechin","termid":"GO:1902168"}


id: PR:O14354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgm101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial genome maintenance protein mgm101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.08","synonyms":[{"name":"Spom972h-mgm101","type":"exact"}],"termid":"PR:O14354"}


id: GO:0102617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin B + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin B dependent) activity (obsolete GO:0102617)","termid":"GO:0102617"}


id: PBO:0004478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp3 (predicted)","termid":"PBO:0004478"}


id: PBO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3 pseudogene 2","termid":"PBO:0048713"}


id: PBO:0064716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 52","termid":"PBO:0064716"}


id: GO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [citrate (pro-3S)-lyase](acetyl form) + H2O = [citrate (pro-3S)-lyase](thiol form) + acetate.","definition_xrefs":["EC:3.1.2.16","MetaCyc:CITRATE-PRO-3S-LYASE-THIOLESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"[citrate-(pro-3S)-lyase] thiolesterase activity","secondary_identifiers":["RHEA:13657"],"synonyms":[{"name":"[citrate-(pro-3S)-lyase] thioesterase activity","type":"related"},{"name":"citrate (pro-3S)-lyase thiolesterase activity","type":"exact"},{"name":"citrate lyase deacetylase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thioesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thiolesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase(acetyl-form) hydrolase activity","type":"related"}],"termid":"GO:0047778"}


id: GO:0150065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:bc","PMID:19457097","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of deacetylase activity","termid":"GO:0150065"}


id: PBO:0075030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-41","termid":"PBO:0075030"}


id: PBO:0052948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation associated protein","termid":"PBO:0052948"}


id: MOD:01022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2-piperidinecarboxylic acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-piperidinecarboxylic acid","synonyms":[{"name":"Pip","type":"exact"}],"termid":"MOD:01022"}


id: PBO:0031785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis","termid":"PBO:0031785"}


id: PBO:0077046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 1","termid":"PBO:0077046"}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: PBO:0035734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule_plus-end_during_mitotic_interphase","termid":"PBO:0035734"}


id: GO:0072539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires the specialized features of a T-helper 17 (Th17) cell. A Th17 cell is a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["CL:0000899","GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell differentiation","termid":"GO:0042093"},{"relation_name":"part_of","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell differentiation","synonyms":[{"name":"T-helper 17 cell development","type":"related"}],"termid":"GO:0072539"}


id: GO:0102819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bixin aldehyde + O2 + NAD = norbixin + NADH + H+.","definition_xrefs":["GOC:pz","EC:1.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"bixin aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8237"],"termid":"GO:0102819"}


id: GO:2000607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in mesonephros development","termid":"GO:2000607"}


id: GO:0080058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein modification process in which a glutathione molecule is removed from a protein amino acid by breaking a disulfide linkage.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutathionylation","synonyms":[{"name":"protein amino acid deglutathionylation","type":"exact"}],"termid":"GO:0080058"}


id: GO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature Sertoli cells involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["GOC:dph","GOC:aruk","GOC:bc","PMID:22332112","PMID:23546604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal ectoplasmic specialization","synonyms":[{"name":"basal ES","type":"exact"}],"termid":"GO:0061832"}


id: MOD:00598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-hydroxyethyl)cysteine","definition_xrefs":["Unimod:278","PubMed:15351294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-hydroxyethyl)cysteine","synonyms":[{"name":"Ethanolation of Cys","type":"related"},{"name":"Ethanolyl","type":"related"}],"termid":"MOD:00598"}


id: PBO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mRNA processing body, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0016070"}


id: PBO:0028283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0028283"}


id: GO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid and dependent on the coupling of the alpha subunit of G proteins to the hormone receptors.","definition_xrefs":["GOC:pj","PMID:11027362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway, G-alpha-dependent","synonyms":[{"name":"gibberellic acid mediated signalling, G-alpha-dependent","type":"exact"}],"termid":"GO:0042388"}


id: PBO:0091971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17 (no initiator methionine)","termid":"PBO:0091971"}


id: PBO:0059622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 3","termid":"PBO:0059622"}


id: GO:1990708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The associative learning process by which an animal learns and remembers an association between a neutral, unchanging environment and a putatively rewarding, internal state produced by a xenobiotic or drug.","definition_xrefs":["PMID:21549821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conditioned place preference","termid":"GO:1990708"}


id: PBO:0030898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulation_phenotype_during_vegetative_growth","termid":"PBO:0030898"}


id: SO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA typically derived from intronic sequence of the sense strand of a cognate host gene, that is not rapidly degraded. It may contain exonic sequences, 5′ caps, and/or polyA tails.","definition_xrefs":["PMID:27147469","PMID:29397203","PMID:30391089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sisRNA","synonyms":[{"name":"Stable intronic sequence RNA","type":"exact"},{"name":"stable_intronic_sequence_RNA","type":"exact"}],"termid":"SO:0002352"}


id: FYPO:0003715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes is abolished, and the protein is instead detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to lateral cortical node","termid":"FYPO:0003713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"abolished protein localisation to lateral cortical node, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"abolished protein localization to lateral cortical node, with protein distributed in cell cortex","type":"narrow"},{"name":"abolished protein localization to lateral cortical node, with protein distributed in plasma membrane","type":"narrow"},{"name":"abolished protein localization to lateral cortical node, with protein distributed in plasma membrane or cortex, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cortical node abolished, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0003715"}


id: FYPO:0000315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, septated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, septated cell","type":"exact"},{"name":"inviable following spore germination with elongated, septated germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, septated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, septated germ tube","type":"exact"}],"termid":"FYPO:0000315"}


id: PBO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.15","termid":"PBO:0004531"}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: PBO:0074657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 47","termid":"PBO:0074657"}


id: PBO:0063937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 2","termid":"PBO:0063937"}


id: GO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"is_a","term_name":"negative regulation of somatic stem cell population maintenance","termid":"GO:1904673"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072040"}


id: PBO:0030870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_contraction","termid":"PBO:0030870"}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: PBO:0004360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (predicted)","termid":"PBO:0004360"}


id: PBO:0040812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 1","termid":"PBO:0040812"}


id: GO:0000109
data:
  {"annotated_genes":["SJAG_03618","SJAG_01480","SJAG_02828","SJAG_02334","SJAG_04540","SJAG_01049","SJAG_00512","SJAG_00901","SJAG_00500","SJAG_03454","SJAG_04147","SJAG_02556","SJAG_01887","SJAG_03612","SJAG_03206","SJAG_00995","SJAG_03613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112781,112782,112803],"is_not":false,"summary":null,"term":"GO:0000109"},{"annotations":[87020,107256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070912"},{"annotations":[84552,87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070913"},{"annotations":[106928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070522"},{"annotations":[114804,106929,107523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000110"},{"annotations":[84480,113213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000111"},{"annotations":[86421,99270,86055,88309,108187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000112"},{"annotations":[107349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000113"},{"annotations":[84482,113214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in nucleotide-excision repair.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01480":null,"SJAG_01887":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_04147":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UvrB-UvrC complex","type":"narrow"},{"name":"UvrBC complex","type":"narrow"}],"termid":"GO:0000109","terms_by_termid":{"GO:0000109":null,"GO:0000110":null,"GO:0000111":null,"GO:0000112":null,"GO:0000113":null,"GO:0070522":null,"GO:0070912":null,"GO:0070913":null,"GO:0071942":null}}


id: GO:0022030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of glial cells through the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon glial cell migration","termid":"GO:0022030"}


id: FYPO:0003268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation","synonyms":[{"name":"decreased rate of mitotic spindle elongation during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"decreased rate of spindle elongation during mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0003268"}


id: PBO:0054154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1521","termid":"PBO:0054154"}


id: GO:0033968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(4-carboxybutanamido)cephalosporanate + H2O = (7R)-7-aminocephalosporanate + glutarate.","definition_xrefs":["EC:3.5.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glutaryl-7-aminocephalosporanic-acid acylase activity","secondary_identifiers":["RHEA:23508","MetaCyc:3.5.1.93-RXN"],"synonyms":[{"name":"(7R)-7-(4-carboxybutanamido)cephalosporanate amidohydrolase activity","type":"related"},{"name":"7beta-(4-carboxybutanamido)cephalosporanic acid acylase activity","type":"related"},{"name":"CA","type":"related"},{"name":"GA","type":"related"},{"name":"GCA","type":"related"},{"name":"GL-7-ACA acylase activity","type":"related"},{"name":"cephalosporin C acylase activity","type":"related"},{"name":"cephalosporin acylase activity","type":"related"},{"name":"glutaryl-7-ACA acylase activity","type":"related"},{"name":"glutaryl-7-aminocephalosporanic acid acylase activity","type":"related"}],"termid":"GO:0033968"}


id: PBO:0075480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily B member 1, pseudogene","termid":"PBO:0075480"}


id: GO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-glycinamide = glycinamide + peptide. Cleavage of C-terminal glycinamide from a polypeptide.","definition_xrefs":["MetaCyc:PEPTIDYL-GLYCINAMIDASE-RXN","EC:3.4.19.2"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycinamidase activity (obsolete GO:0050426)","synonyms":[{"name":"carboxamidopeptidase activity","type":"related"},{"name":"carboxyamidase activity","type":"related"},{"name":"peptidyl amino acid amide hydrolase activity","type":"related"},{"name":"peptidyl carboxy-amidase activity","type":"related"},{"name":"peptidyl carboxyamidase activity","type":"related"},{"name":"peptidyl-glycinamidase activity","type":"exact"}],"termid":"GO:0050426"}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_01925","SJAG_03357","SJAG_00938","SJAG_03011","SJAG_04044","SJAG_03864","SJAG_00284","SJAG_03005","SJAG_03268","SJAG_02166","SJAG_04960","SJAG_03938","SJAG_02320","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89356,113804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114486],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[86910,98039,113789,84814,114885,110258,109975,95670],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[112282,104253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: _global:interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between two entities in which the processes executed by the two entities are causally connected.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with","secondary_identifiers":["RO:0002434"],"synonyms":[{"name":"in pairwise interaction with","type":"exact"}],"termid":"_global:interacts_with"}


id: GO:0045893
data:
  {"annotated_genes":["SJAG_00266","SJAG_02472","SJAG_02252","SJAG_00698","SJAG_00163","SJAG_03573","SJAG_00613","SJAG_01243","SJAG_02730","SJAG_00297","SJAG_01113","SJAG_05343","SJAG_01764","SJAG_04551","SJAG_01150","SJAG_05203","SJAG_04421","SJAG_06599","SJAG_03289","SJAG_02218","SJAG_02773","SJAG_05341","SJAG_02938","SJAG_04749","SJAG_03981","SJAG_04755","SJAG_04813","SJAG_00904","SJAG_02608","SJAG_05247","SJAG_00641","SJAG_00150","SJAG_03118","SJAG_01403","SJAG_00156","SJAG_02551","SJAG_04647","SJAG_02391","SJAG_04705","SJAG_02326","SJAG_01151","SJAG_01952","SJAG_00342","SJAG_00987","SJAG_04249","SJAG_03879","SJAG_00269","SJAG_00693","SJAG_04611","SJAG_01149","SJAG_01062","SJAG_05187","SJAG_02057","SJAG_01694","SJAG_02138","SJAG_03484","SJAG_03590","SJAG_03143","SJAG_00766","SJAG_02196","SJAG_01583","SJAG_02592","SJAG_00802","SJAG_02956","SJAG_03519","SJAG_04206","SJAG_03735","SJAG_03538","SJAG_02415","SJAG_03967","SJAG_02723","SJAG_01805","SJAG_04855","SJAG_02671","SJAG_01916","SJAG_01441","SJAG_04092","SJAG_02255","SJAG_04712","SJAG_03126","SJAG_01771","SJAG_00909","SJAG_03241","SJAG_06638","SJAG_04036","SJAG_03067","SJAG_01307","SJAG_01213","SJAG_03501","SJAG_03346","SJAG_04191","SJAG_03061","SJAG_00210","SJAG_00164","SJAG_01199","SJAG_02406","SJAG_06576","SJAG_02494","SJAG_02849","SJAG_00973","SJAG_05313","SJAG_02810","SJAG_05153","SJAG_03183","SJAG_04820","SJAG_01740","SJAG_02311","SJAG_04099","SJAG_04388","SJAG_02474","SJAG_03622","SJAG_04839","SJAG_01778","SJAG_04009","SJAG_03421","SJAG_05288","SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108029],"is_not":false,"summary":null,"term":"GO:0045893"},{"annotations":[107026,104989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[85633,89633,84154,102766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[108069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[113079,103077,88190,106683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[84410,75353,90471,69978,103164,101939,105472,98268,109744,86263,96615,102214,106979,91943,99288,110188,110675,83610,61439,104750,93437,88890,89949,112564,114117,87553,93657,103694,67872,98979,67745,98395,84223,60785,90873,62295,84352,91217,91669,92415,93655,94710,98349,111102,112169,105163,107027,108402,105301,104571,112372,104690,113073,113443,114276,113080,108030,89427,98814,90507,93658,95417,64505,95622,100885,65533,62495,105810,115131,89852,68564,107859,94558,96604,93656,93659,109793,113555,104920,91833,104087,100556,107989,105437,83787,115130,85215,110928,106839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[91944,101468,111389,102146,105151,113081,99179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[101794,110823,98076,105152,94807,114977,95151,83649,102472,111390,102147,102340,86843,86534,85878,90583,91519,92000,99801,104837,104864,90472,99538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"},{"relation_name":"positively_regulates","term_name":"DNA-templated 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regulation of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0043193","GO:0045941","GO:0061020"],"synonyms":[{"name":"activation of gene-specific transcription","type":"related"},{"name":"activation of transcription, DNA-dependent","type":"narrow"},{"name":"positive regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"positive regulation of gene-specific transcription","type":"related"},{"name":"positive regulation of transcription, DNA-dependent","type":"exact"},{"name":"positive regulation of transcription, DNA-templated","type":"exact"},{"name":"stimulation of gene-specific transcription","type":"narrow"},{"name":"stimulation of transcription, DNA-dependent","type":"narrow"},{"name":"transcription activator activity","type":"related"},{"name":"up regulation of gene-specific transcription","type":"related"},{"name":"up regulation of transcription, DNA-dependent","type":"exact"},{"name":"up-regulation of gene-specific transcription","type":"related"},{"name":"up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"upregulation of gene-specific transcription","type":"related"},{"name":"upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"GO:0045893","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null,"GO:1904595":null}}


id: GO:0098593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium. It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.","definition_xrefs":["PMID:6541604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"goblet cell theca","termid":"GO:0098593"}


id: PBO:0084754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix GTPase; associates with mitochondrial ribosomes; important for translation under temperature and nutrient stress; may have a role in translational fidelity; similar to bacterial LepA elongation factor","termid":"PBO:0084754"}


id: PBO:0055518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2952","termid":"PBO:0055518"}


id: GO:0032978
data:
  {"annotated_genes":["SJAG_01405","SJAG_03633","SJAG_05302","SJAG_05300","SJAG_01917"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110787,95132,109459,97036,84980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into a lipid bilayer, e.g., the prokaryotic, mitochondrial, or chloroplast inner membrane, from the inner side.","definition_xrefs":["PMID:14739936","PMID:15473843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane from inner side","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"insertion of proteins into membrane from the inner side","type":"exact"}],"termid":"GO:0032978","terms_by_termid":{"GO:0032979":null}}


id: PBO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase B inhibitor Pbi2","termid":"PBO:0015709"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: PBO:0054169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1541","termid":"PBO:0054169"}


id: GO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An amorphous structure surrounding the core of the centrosome, from which microtubules are nucleated; contains gamma-tubulin.","definition_xrefs":["GOC:kp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosomal corona","termid":"GO:0031592"}


id: GO:0060972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right pattern formation","termid":"GO:0060972"}


id: PBO:0058056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4277","termid":"PBO:0058056"}


id: PBO:0088908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr3","termid":"PBO:0088908"}


id: PBO:0044088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A8","termid":"PBO:0044088"}


id: PBO:0004677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-amino-6-(5-phosphoribosylamino) uracil reductase (predicted)","termid":"PBO:0004677"}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: GO:0001162
data:
  {"annotated_genes":["SJAG_03519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103697],"is_not":false,"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II intronic DNA sequence that regulates the transcription of the transcript it is contained within.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"intronic transcription regulatory region sequence-specific DNA binding","termid":"GO:0001161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001162","terms_by_termid":{"GO:0001162":null}}


id: PBQ:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G2 due to glucose limitation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G2 arrest due to glucose limitation","synonyms":[{"name":"cellular quiescence following G2 arrest due to glucose limitation","type":"exact"},{"name":"quiescence following G2 arrest due to glucose limitation","type":"broad"}],"termid":"PBQ:0000004"}


id: PBO:0041182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 2","termid":"PBO:0041182"}


id: PBO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3","termid":"PBO:0045169"}


id: PBO:0039040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 2","termid":"PBO:0039040"}


id: GO:0051651
data:
  {"annotated_genes":["SJAG_00661","SJAG_04867","SJAG_01017","SJAG_00321","SJAG_04221","SJAG_01116","SJAG_01738","SJAG_01001","SJAG_04982","SJAG_00030","SJAG_01993","SJAG_03850","SJAG_00368","SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"},{"annotations":[86575,100491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[90164,96293,100758,106975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[89519],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[104781],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[93861,110422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[103138,111298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00321":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01738":null,"SJAG_01993":null,"SJAG_03170":null,"SJAG_03850":null,"SJAG_04221":null,"SJAG_04867":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of location in cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular retention","type":"narrow"},{"name":"cellular sequestering","type":"narrow"},{"name":"cellular storage","type":"narrow"},{"name":"intracellular retention","type":"narrow"},{"name":"intracellular sequestering","type":"narrow"},{"name":"intracellular storage","type":"narrow"},{"name":"maintenance of cellular localization","type":"related"},{"name":"maintenance of intracellular localization","type":"narrow"},{"name":"maintenance of localization in cell","type":"related"},{"name":"maintenance of localization within cell","type":"narrow"},{"name":"retention within cell","type":"narrow"},{"name":"sequestering within cell","type":"narrow"},{"name":"storage within cell","type":"narrow"}],"termid":"GO:0051651","terms_by_termid":{"GO:0006621":null,"GO:0006880":null,"GO:0032065":null,"GO:0042989":null,"GO:0051209":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:1990854":null}}


id: PBO:0079692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5","termid":"PBO:0079692"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: PBO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap155","termid":"PBO:0002474"}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: PBO:0070039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1336, pseudogene","termid":"PBO:0070039"}


id: GO:1903580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ATP metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20695849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"positively_regulates","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ATP metabolic process","synonyms":[{"name":"activation of ATP metabolic process","type":"narrow"},{"name":"activation of ATP metabolism","type":"narrow"},{"name":"positive regulation of ATP metabolism","type":"exact"},{"name":"up regulation of ATP metabolic process","type":"exact"},{"name":"up regulation of ATP metabolism","type":"exact"},{"name":"up-regulation of ATP metabolic process","type":"exact"},{"name":"up-regulation of ATP metabolism","type":"exact"},{"name":"upregulation of ATP metabolic process","type":"exact"},{"name":"upregulation of ATP metabolism","type":"exact"}],"termid":"GO:1903580"}


id: PBO:0088796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone and CENP-A amino terminus domain (NTD) isomerase Ani2","termid":"PBO:0088796"}


id: FYPO:0003827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is decreased.","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"decreased ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased ribosome S6 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced ribosomal S6 protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003827"}


id: GO:0047033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prostaglandin I(2) = 15-dehydro-prostaglandin I(2) + H+ + NADPH.","definition_xrefs":["RHEA:21420","EC:1.1.1.231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"15-hydroxyprostaglandin-I dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R03520","MetaCyc:1.1.1.231-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-6,9alpha-epoxy-11alpha,15-dihydroxyprosta-5,13-dienoate:NADP+ 15-oxidoreductase activity","type":"related"},{"name":"NADP+-dependent PGI2-specific 15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"NADP-linked 15-hydroxyprostaglandin (prostacyclin) dehydrogenase activity","type":"related"},{"name":"PG I2 dehydrogenase activity","type":"related"},{"name":"prostacyclin dehydrogenase activity","type":"related"}],"termid":"GO:0047033"}


id: FYECO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminolevulinic acid was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminolevulinic acid","secondary_identifiers":["PMID:29549126"],"synonyms":[{"name":"+ ALA","type":"exact"}],"termid":"FYECO:0000352"}


id: PBO:0030123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-canavanine","termid":"PBO:0030123"}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: PBO:0076934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 2","termid":"PBO:0076934"}


id: GO:1903676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:11959995","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cap-dependent translational initiation","synonyms":[{"name":"activation of cap-dependent translational initiation","type":"narrow"},{"name":"up regulation of cap-dependent translational initiation","type":"exact"},{"name":"up-regulation of cap-dependent translational initiation","type":"exact"},{"name":"upregulation of cap-dependent translational initiation","type":"exact"}],"termid":"GO:1903676"}


id: PBO:0076124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 6","termid":"PBO:0076124"}


id: PBO:0031662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification_during_vegetative_growth","termid":"PBO:0031662"}


id: GO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response","synonyms":[{"name":"activation of acute inflammatory response","type":"narrow"},{"name":"stimulation of acute inflammatory response","type":"narrow"},{"name":"up regulation of acute inflammatory response","type":"exact"},{"name":"up-regulation of acute inflammatory response","type":"exact"},{"name":"upregulation of acute inflammatory response","type":"exact"}],"termid":"GO:0002675"}


id: PBO:0058788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7157","termid":"PBO:0058788"}


id: PATO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000316 relative color value (obsolete PATO:0000316)","termid":"PATO:0000316"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87834],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:28283058","PMID:25533955","PMID:31101919","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PBO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_monopolar_protein_localization_to_cell_tip","termid":"PBO:0034668"}


id: GO:0021672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 7. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 structural organization","synonyms":[{"name":"rhombomere 7 structural organisation","type":"exact"}],"termid":"GO:0021672"}


id: FYPO:0000801
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115265],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115136,115495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115200],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115476],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115444,115655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115266],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal.","definition_xrefs":["PomBase:mah","GO:0030036","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"},{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T 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growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_04280","SJAG_03596","SJAG_04703","SJAG_01143","SJAG_02592"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","for3delta","pom1delta","rga4delta","sty1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actin cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cytoskeleton organization during mitotic cell 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id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: PBO:0084523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; may interact with ribosomes; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084523"}


id: GO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}


id: PBO:0072604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSL1D1 divergent transcript","termid":"PBO:0072604"}


id: GO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to euchromatin and the nuclear inner membrane, in order to establish and maintain the euchromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"euchromatin-nuclear membrane anchor activity","synonyms":[{"name":"euchromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-euchromatin anchor activity","type":"exact"},{"name":"nuclear membrane-euchromatin tether activity","type":"exact"}],"termid":"GO:0062240"}


id: PBO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase","termid":"PBO:0003272"}


id: MOD:00367
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362","PubMed:14752058","Unimod:40#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(sulfooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfothreonine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-threonine","type":"exact"},{"name":"O3-sulfonothreonine","type":"exact"},{"name":"O3-sulfothreonine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"threonine sulfate ester","type":"exact"}],"termid":"MOD:00367"}


id: FYPO:0005369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow at low temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth at low temperature","synonyms":[{"name":"abolished cell population growth at low temperature during mitotic cell cycle","type":"related"},{"name":"abolished growth at low temperature","type":"broad"},{"name":"abolished vegetative cell population growth at low temperature","type":"exact"},{"name":"cell population growth at low temperature abolished","type":"exact"},{"name":"cold sensitive","type":"related"},{"name":"hypersensitive to low temperature","type":"related"},{"name":"sensitive to cold","type":"related"},{"name":"sensitive to low temperature","type":"related"},{"name":"sensitive to low temperature during vegetative growth","type":"related"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0005369"}


id: PBO:0084353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS and contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, only present in strains with Sigma1278b background; located on left arm of chromosome XIV approximately 15 kb from telomere","termid":"PBO:0084353"}


id: PBO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 166","termid":"PBO:0075117"}


id: PBO:0085865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Pmp3p, which is involved in cation transport; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085865"}


id: FYPO:0005769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing G-quartet (G4) motifs. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah","PMID:25471935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at G4 motif during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at G-quadruplex during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G-quartet during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G4 motif during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005769"}


id: FYPO:0001581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are more visible (usually by microscopy) than normal. A vacuolated phenotype may be due to the presence of more vacuoles in a cell than normal, or to vacuoles located nearer the cell surface (and hence more visible) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"vacuolated","synonyms":[{"name":"vacuolated during mitotic cell cycle","type":"related"},{"name":"vacuolated during vegetative growth","type":"exact"}],"termid":"FYPO:0001581"}


id: PBO:0067434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 555, pseudogene","termid":"PBO:0067434"}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: GO:0160117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(6) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(6) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.256","PMID:34669960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016740","GO:0016741","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA (guanine(6)-N2)-methyltransferase activity","secondary_identifiers":["RHEA:51116"],"synonyms":[{"name":"m(2)G6 methyltransferase","type":"exact"},{"name":"methyltransferase Trm14","type":"exact"}],"termid":"GO:0160117"}


id: PBO:0085725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the initiation of DNA replication; required for proper assembly of replication proteins at the origins of replication; interacts with the DDK-phosphorylated MCM complex and required for the recruitment of Cdc45p; localizes to nuclear foci that become diffuse upon DNA replication stress; homologous to the human Treslin/Ticrr protein","termid":"PBO:0085725"}


id: PBO:0067719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 17","termid":"PBO:0067719"}


id: FYPO:0002107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable stubby vegetative cell","synonyms":[{"name":"inviable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped vegetative cell","type":"exact"},{"name":"lethal; stubby vegetative cell","type":"exact"},{"name":"stubby inviable cell during vegetative growth","type":"exact"},{"name":"stubby inviable vegetative cell","type":"exact"}],"termid":"FYPO:0002107"}


id: GO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of elevated metabolic activity, during which oxygen consumption increases, that occurs at fertilization. An enhanced uptake of oxygen leads to the production of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals. Capacitation, a necessary prerequisite event to successful fertilization, can be induced by reactive oxygen species in vitro; hydrogen peroxide is used as an extracellular oxidant to cross-link the protective surface envelopes.","definition_xrefs":["PMID:9013127","PMID:2537493","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst at fertilization","synonyms":[{"name":"metabolic burst at fertilization","type":"exact"},{"name":"oxidative burst at fertilization","type":"exact"}],"termid":"GO:0045729"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: PBO:0085086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein; anchored to the nuclear inner membrane, that interacts with the vacuolar membrane protein Vac8p to promote formation of nucleus-vacuole junctions during piecemeal microautophagy of the nucleus (PMN)","termid":"PBO:0085086"}


id: GO:0102498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose = 2 glucose.","definition_xrefs":["PMID:16343940","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"maltose glucosidase activity","secondary_identifiers":["MetaCyc:RXN-15910"],"termid":"GO:0102498"}


id: SO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophilic amino acid encoded by the codons GGN (GGT, GGC, GGA and GGG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine","synonyms":[{"name":"G","type":"exact"},{"name":"Gly","type":"exact"}],"termid":"SO:0001443"}


id: GO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing a behavioral or physiological response(s) from a responding organism or cell that leads to the transfer or union of genetic material between organisms or cells. The mating pheromone can either be retained on the cell surface or secreted.","definition_xrefs":["GOC:clt","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005186","GO:0005488","GO:0140677","GO:0098772","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"mating pheromone activity","termid":"GO:0000772"}


id: PBO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 2 (predicted)","termid":"PBO:0002482"}


id: GO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a patched (ptc) protein, a receptor for hedgehog proteins.","definition_xrefs":["PMID:11731473","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"patched binding","synonyms":[{"name":"patched ligand","type":"narrow"},{"name":"ptc binding","type":"exact"},{"name":"ptc ligand","type":"narrow"}],"termid":"GO:0005113"}


id: GO:0050522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces a known acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other known acceptors","secondary_identifiers":["EC:1.20.98.-"],"termid":"GO:0050522"}


id: GO:0102644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monocyclic sesterterpenediol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"monocyclic sesterterpenediol synthase activity","secondary_identifiers":["MetaCyc:RXN-15756"],"termid":"GO:0102644"}


id: PBO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q21)","termid":"PBO:0047885"}


id: GO:0010183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the growth of pollen tube is directed towards the female gametophyte.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube guidance","termid":"GO:0010183"}


id: PBO:0055175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2599","termid":"PBO:0055175"}


id: PBO:0040759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEAN1 antisense RNA 1","termid":"PBO:0040759"}


id: GO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrochelirubine + H+ + NADPH + O2 = 12-hydroxydihydrochelirubine + H2O + NADP+.","definition_xrefs":["EC:1.14.14.101","RHEA:10156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydrochelirubine 12-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04708","MetaCyc:1.14.13.57-RXN"],"synonyms":[{"name":"dihydrochelirubine 12-hydroxylase activity","type":"exact"},{"name":"dihydrochelirubine,NADPH:oxygen oxidoreductase (12-hydroxylating)","type":"related"}],"termid":"GO:0047089"}


id: PBO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0031765"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: GO:1900301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of laminarabiose transport (obsolete GO:1900301)","synonyms":[{"name":"down regulation of laminarabiose transport","type":"exact"},{"name":"down-regulation of laminarabiose transport","type":"exact"},{"name":"downregulation of laminarabiose transport","type":"exact"},{"name":"inhibition of laminarabiose transport","type":"narrow"}],"termid":"GO:1900301"}


id: GO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of the IgM isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgM binding","termid":"GO:0001791"}


id: GO:0098032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the collar structure of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, collar","termid":"GO:0098031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar fiber","termid":"GO:0098032"}


id: PBO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 6","termid":"PBO:0060263"}


id: GO:2001173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001173)","synonyms":[{"name":"regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001173"}


id: GO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051440)","synonyms":[{"name":"meiotic APC regulator","type":"narrow"},{"name":"meiotic SCF complex regulator","type":"narrow"},{"name":"meiotic anaphase-promoting complex regulator","type":"narrow"},{"name":"meiotic ubiquitin ligase regulator","type":"related"},{"name":"meiotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051440"}


id: PBO:0041567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 141","termid":"PBO:0041567"}


id: PBO:0038974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A3 receptor","termid":"PBO:0038974"}


id: GO:0030194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"positive regulation of coagulation","termid":"GO:0050820"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"positive regulation of hemostasis","termid":"GO:1900048"},{"relation_name":"positively_regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation","synonyms":[{"name":"activation of blood coagulation","type":"narrow"},{"name":"stimulation of blood coagulation","type":"narrow"},{"name":"up regulation of blood coagulation","type":"exact"},{"name":"up-regulation of blood coagulation","type":"exact"},{"name":"upregulation of blood coagulation","type":"exact"}],"termid":"GO:0030194"}


id: GO:0034038
data:
  {"annotated_genes":["SJAG_04130"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98696],"is_not":false,"summary":null,"term":"GO:0034038"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine. Four sub-reactions have been identified,in which the intermediates remain tightly associated with the enzyme: spermidine + NAD+ = dehydrospermidine + NADH; dehydrospermidine + [enzyme]-lysine = N-(4-aminobutylidene)-[enzyme]-lysine + propane-1,3-diamine; N-(4-aminobutylidene)-[enzyme]-lysine + [eIF5A-precursor]-lysine = N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + [enzyme]-lysine; N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + NADH + H+ = [eIF5A-precursor]-deoxyhypusine + NAD+.","definition_xrefs":["GOC:pde","RHEA:33299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"deoxyhypusine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-204617","Reactome:R-HSA-204647","EC:2.5.1.46","MetaCyc:2.5.1.46-RXN"],"synonyms":[{"name":"(4-aminobutyl)lysine synthase","type":"broad"},{"name":"eIF-5A-deoxyhypusine synthase activity","type":"related"},{"name":"spermidine dehydrogenase","type":"broad"}],"termid":"GO:0034038","terms_by_termid":{"GO:0034038":null}}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: GO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"chrysobactin transport","termid":"GO:0042932"}


id: PR:Q9UTB1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 domain-containing protein C25B8.07c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.07c","synonyms":[{"name":"Spom972h-rcf1","type":"exact"}],"termid":"PR:Q9UTB1"}


id: GO:1900997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzene.","definition_xrefs":["UniPathway:UPA00272","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene biosynthetic process","synonyms":[{"name":"benzene anabolism","type":"exact"},{"name":"benzene biosynthesis","type":"exact"},{"name":"benzene formation","type":"exact"},{"name":"benzene synthesis","type":"exact"}],"termid":"GO:1900997"}


id: FYPO:0005385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the first meiotic nuclear division (part of the meiotic cell cycle) is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic metaphase I","secondary_identifiers":["FYPO:0006769"],"synonyms":[{"name":"abnormal cell cycle arrest in metaphase I","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase I during meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase during first meiotic nuclear division","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase of meiosis I","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in metaphase I","type":"exact"},{"name":"abolished meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005385"}


id: PBO:0087693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; similar to and partially functionally redundant with Ost3p","termid":"PBO:0087693"}


id: FYPO:0006093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microfilament motor activity","synonyms":[{"name":"abnormal actin filament motor activity","type":"exact"},{"name":"abnormal microfilament motor (ATPase) activity","type":"exact"},{"name":"abnormal myosin ATPase activity","type":"related"}],"termid":"FYPO:0006093"}


id: GO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.","definition_xrefs":["PMID:1898736","RESID:AA0219"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan (obsolete GO:0019800)","synonyms":[{"name":"peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan","type":"exact"}],"termid":"GO:0019800"}


id: PBO:0026983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_elongated_oscillating_nucleus","termid":"PBO:0026983"}


id: PBO:0011121
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Chromsome segregation in Meiosis","termid":"PBO:0011121"}


id: PBO:0038304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_date_version","termid":"PBO:0038304"}


id: PBO:0091341
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWItching","termid":"PBO:0091341"}


id: PBO:0039851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 18","termid":"PBO:0039851"}


id: PBO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 32","termid":"PBO:0072346"}


id: GO:0051386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the neurotrophin TRK receptor signaling pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"neurotrophin TRK receptor signaling pathway","termid":"GO:0048011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"regulation of NGF receptor signaling pathway","type":"exact"},{"name":"regulation of NGF receptor signalling pathway","type":"exact"},{"name":"regulation of nerve growth factor receptor signaling pathway","type":"related"},{"name":"regulation of nerve growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0051386"}


id: PBO:0065824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family pseudogene 2","termid":"PBO:0065824"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_00930","SJAG_00332","SJAG_01297","SJAG_00773","SJAG_04745","SJAG_02336","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74691,87301,90911,99672,99873,100028,104381],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["PMID:32842864","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003774"}],"interesting_parent_ids":["GO:0003774","GO:0003674"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.4.4-RXN","EC:5.6.1.3"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: FYPO:0006444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transcriptional response to amino acid starvation","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006444"}


id: PBO:0060528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 1","termid":"PBO:0060528"}


id: GO:0004032
data:
  {"annotated_genes":["SJAG_01869","SJAG_04660","SJAG_02010","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87952,91155,108837],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[91892,97301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[91893,97302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+.","definition_xrefs":["EC:1.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALDEHYDE-REDUCTASE-RXN","Reactome:R-HSA-5652172","RHEA:12789","Reactome:R-HSA-196060","KEGG_REACTION:R02820"],"synonyms":[{"name":"aldehyde reductase activity","type":"related"},{"name":"alditol:NADP+ 1-oxidoreductase activity","type":"exact"},{"name":"aldose reductase activity","type":"related"},{"name":"polyol dehydrogenase (NADP(+)) activity","type":"related"}],"termid":"GO:0004032","terms_by_termid":{"GO:0004032":null,"GO:0032866":null,"GO:0032867":null}}


id: GO:0031501
data:
  {"annotated_genes":["SJAG_04095","SJAG_00816","SJAG_00295","SJAG_01276","SJAG_06425","SJAG_05219","SJAG_03555","SJAG_02903","SJAG_00831","SJAG_03115","SJAG_03801","SJAG_04770"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92555,99891,102825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033185"},{"annotations":[99161,112230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[87370,85719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[108803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000136"},{"annotations":[83696,114099,101048,94020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"A complex that posseses mannosyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_01276":null,"SJAG_02903":null,"SJAG_03115":null,"SJAG_03555":null,"SJAG_03801":null,"SJAG_04095":null,"SJAG_04770":null,"SJAG_05219":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mannosyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031501","terms_by_termid":{"GO:0000136":null,"GO:0033185":null,"GO:0120097":null,"GO:0140497":null,"GO:1990529":null}}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: PBO:0081904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 861, pseudogene","termid":"PBO:0081904"}


id: GO:1901898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","PMID:19708671","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of relaxation of muscle","termid":"GO:1901078"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"negatively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of cardiac muscle","synonyms":[{"name":"down regulation of relaxation of cardiac muscle","type":"exact"},{"name":"down-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"downregulation of relaxation of cardiac muscle","type":"exact"},{"name":"inhibition of relaxation of cardiac muscle","type":"narrow"}],"termid":"GO:1901898"}


id: GO:0009467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoheme class I cytochrome c (obsolete GO:0009467)","synonyms":[{"name":"monoheme class I cytochrome c","type":"exact"}],"termid":"GO:0009467"}


id: GO:0098983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse that lacks an electron dense postsynaptic specialization, uses GABA as a neurotransmitter and whose activity results in inhibitory postsynaptic potentials.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetric synapse","termid":"GO:0032280"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"},{"relation_name":"is_a","term_name":"GABA-ergic synapse","termid":"GO:0098982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric, GABA-ergic, inhibitory synapse","termid":"GO:0098983"}


id: GO:0033844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate from the D-galactose 6-sulfate residues of porphyran, producing 3,6-anhydrogalactose residues.","definition_xrefs":["EC:2.5.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"galactose-6-sulfurylase activity","secondary_identifiers":["MetaCyc:2.5.1.5-RXN"],"synonyms":[{"name":"D-galactose-6-sulfate:alkyltransferase (cyclizing) activity","type":"related"},{"name":"galactose 6-sulfatase activity","type":"related"},{"name":"galactose-6-sulfatase activity","type":"related"},{"name":"porphyran sulfatase activity","type":"related"}],"termid":"GO:0033844"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: PBO:0046591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 1","termid":"PBO:0046591"}


id: GO:0044676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three polypeptides which also contains molybdenum, a molybdopterin guanine dinucleotide and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["PMID:1915887","GOC:mengo_curators","PMID:8954165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (molybdenum enzyme) complex","termid":"GO:0044676"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: GO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the chambers of the heart expand in size, contributing to their shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber ballooning","termid":"GO:0003242"}


id: PBO:0026930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_composition","termid":"PBO:0026930"}


id: GO:1901481
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99957],"is_not":false,"summary":null,"term":"GO:1901481"}]},"cv_name":"biological_process","definition":"Any L-glutamate import that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-glutamate import involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-glutamate uptake involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1901481","terms_by_termid":{"GO:1901481":null}}


id: PBO:0012000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP family cytoskeletal protein (predicted)","termid":"PBO:0012000"}


id: GO:1904920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of MAPK cascade involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","PMID:20203177","GOC:TermGenie","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK cascade involved in axon regeneration (obsolete GO:1904920)","synonyms":[{"name":"regulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"regulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"regulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"regulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"regulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"regulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"regulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"}],"termid":"GO:1904920"}


id: GO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor-regulated SMAD signaling protein.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19114992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"R-SMAD binding","synonyms":[{"name":"pathway restricted SMAD binding","type":"exact"},{"name":"pathway-restricted SMAD binding","type":"exact"},{"name":"receptor regulated SMAD binding","type":"exact"},{"name":"receptor-regulated SMAD binding","type":"exact"}],"termid":"GO:0070412"}


id: GO:1990517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment, which is a portion of a modified sensory cilium.","definition_xrefs":["GOC:krc","PMID:20212494"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to photoreceptor outer segment (obsolete GO:1990517)","termid":"GO:1990517"}


id: GO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense-related programmed cell death","termid":"GO:0034053"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host defense-related programmed cell death","synonyms":[{"name":"down regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host defense-related PCD","type":"narrow"},{"name":"inhibition by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"inhibition of HR","type":"narrow"},{"name":"inhibition of host defense-related PCD","type":"narrow"},{"name":"inhibition of hypersensitive response","type":"narrow"},{"name":"negative regulation by symbiont of host defense-related PCD","type":"exact"},{"name":"negative regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of plant HR","type":"narrow"},{"name":"negative regulation by symbiont of plant hypersensitive response","type":"narrow"},{"name":"suppression by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"suppression of HR","type":"narrow"}],"termid":"GO:0034054"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine","termid":"GO:0044526"}


id: PBO:0076757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 7","termid":"PBO:0076757"}


id: PBO:0110501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFBR1 pseudogene 1","termid":"PBO:0110501"}


id: PR:Q9HDY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt71 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.10c","synonyms":[{"name":"Spom972h-ypt71","type":"exact"}],"termid":"PR:Q9HDY0"}


id: PBO:0039926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 28","termid":"PBO:0039926"}


id: MOD:01821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex reporter+balance group.","definition_xrefs":["Unimod:985","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01821"}


id: PBO:0038511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 2","termid":"PBO:0038511"}


id: PBO:0054853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2267","termid":"PBO:0054853"}


id: GO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone phosphorylation (obsolete GO:0016572)","termid":"GO:0016572"}


id: PBO:0039403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 4","termid":"PBO:0039403"}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: GO:0072050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-shaped body morphogenesis","termid":"GO:0072050"}


id: FYPO:0001632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tyrosine level","termid":"FYPO:0001641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar tyrosine level","synonyms":[{"name":"normal level of tyrosine in vacuole","type":"exact"},{"name":"normal vacuolar L-tyrosine level","type":"exact"},{"name":"normal vacuolar tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tyrosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001632"}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_04025","SJAG_02005","SJAG_05243","SJAG_02622","SJAG_00456","SJAG_02879","SJAG_01331","SJAG_04500","SJAG_04768","SJAG_02382"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83689,85018,86951,88508,91134,102409,105371,105903,111634,114160],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["PMID:18644474","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: PBO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_methionine_nitrogen_source","termid":"PBO:0030096"}


id: PBO:0038788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase 2","termid":"PBO:0038788"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: PBO:0089480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5","termid":"PBO:0089480"}


id: GO:0099573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The post-synaptic specialization of a glutamatergic excitatory synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic postsynaptic density","synonyms":[{"name":"postsynaptic specialization, glutamatergic neuron-to-neuron synapse","type":"exact"}],"termid":"GO:0099573"}


id: GO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron(III) ion","termid":"GO:0010041"},{"relation_name":"is_a","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron(III) ion","synonyms":[{"name":"cellular response to iron(III)","type":"exact"}],"termid":"GO:0071283"}


id: GO:0010249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxin conjugates, a bound form of auxin.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin conjugate metabolic process","synonyms":[{"name":"auxin conjugate metabolism","type":"exact"}],"termid":"GO:0010249"}


id: GO:0034351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell apoptotic process","synonyms":[{"name":"down regulation of glial cell apoptosis","type":"exact"},{"name":"down-regulation of glial cell apoptosis","type":"exact"},{"name":"downregulation of glial cell apoptosis","type":"exact"},{"name":"inhibition of glial cell apoptosis","type":"narrow"},{"name":"negative regulation of glial cell apoptosis","type":"narrow"}],"termid":"GO:0034351"}


id: PBO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM169A antisense RNA 1","termid":"PBO:0047127"}


id: PBO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_proline_nitrogen_source","termid":"PBO:0031127"}


id: GO:0050729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the inflammatory response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"positively_regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammatory response","synonyms":[{"name":"activation of inflammatory response","type":"narrow"},{"name":"stimulation of inflammatory response","type":"narrow"},{"name":"up regulation of inflammatory response","type":"exact"},{"name":"up-regulation of inflammatory response","type":"exact"},{"name":"upregulation of inflammatory response","type":"exact"}],"termid":"GO:0050729"}


id: PBO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIc (gene/pseudogene)","termid":"PBO:0047447"}


id: PBO:0080087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 48","termid":"PBO:0080087"}


id: PBO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IB","termid":"PBO:0061547"}


id: PBO:0043270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member A","termid":"PBO:0043270"}


id: PBO:0079872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF2 regulator of nonsense mediated mRNA decay","termid":"PBO:0079872"}


id: PBO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A16","termid":"PBO:0047013"}


id: PBO:0057388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548BC","termid":"PBO:0057388"}


id: FYPO:0000493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial genome maintenance is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitochondrial genome maintenance","synonyms":[{"name":"increased mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial genome maintenance during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: increased","type":"related"}],"termid":"FYPO:0000493"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["GOC:dph","PMID:12734396","PMID:22863006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0077139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TJAP1 pseudogene 1","termid":"PBO:0077139"}


id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: GO:0050652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elongation of dermatan sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of dermatan sulfate.","definition_xrefs":["PMID:11788602","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"dermatan sulfate proteoglycan biosynthetic process","termid":"GO:0050651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","synonyms":[{"name":"chondroitin sulfate B proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate B proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"},{"name":"chondroitin sulfate B proteoglycan chain elongation","type":"exact"},{"name":"dermatan sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan chain elongation","type":"exact"},{"name":"dermatan sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"dermatan sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"dermatan sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050652"}


id: GO:0070456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactose-1-phosphate + H2O = galactose + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}


id: PBO:0051911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha X","termid":"PBO:0051911"}


id: GO:0042715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on both X chromosomes in the monogametic sex, ultimately resulting in a two-fold reduction in transcription from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["PMID:11102361","GOC:jl","PMID:12672493"],"gene_count":0,"genotype_count":0,"name":"obsolete dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome (obsolete GO:0042715)","synonyms":[{"name":"dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome","type":"related"}],"termid":"GO:0042715"}


id: PBO:0040121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 8","termid":"PBO:0040121"}


id: PBO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 1","termid":"PBO:0042935"}


id: FYPO:0006969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cytidine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cytidine level","synonyms":[{"name":"decreased cellular cytidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular cytidine level during vegetative growth","type":"exact"},{"name":"reduced cellular cytidine level","type":"exact"}],"termid":"FYPO:0006969"}


id: GO:1901947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolism","type":"exact"}],"termid":"GO:1901947"}


id: PBO:0058607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6739","termid":"PBO:0058607"}


id: GO:0033034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell apoptotic process","synonyms":[{"name":"activation of myeloid cell apoptosis","type":"narrow"},{"name":"positive regulation of myeloid cell apoptosis","type":"narrow"},{"name":"stimulation of myeloid cell apoptosis","type":"narrow"},{"name":"up regulation of myeloid cell apoptosis","type":"exact"},{"name":"up-regulation of myeloid cell apoptosis","type":"exact"},{"name":"upregulation of myeloid cell apoptosis","type":"exact"}],"termid":"GO:0033034"}


id: PBO:0090429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) regulatory subunit","termid":"PBO:0090429"}


id: GO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060825"}


id: PBO:0088129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved with Npc2p in sterol trafficking; transits through the biosynthetic vacuolar protein sorting pathway, involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCB), similar to the accumulation of high amounts of lipids observed in patients with Neimann-Pick C, a disease caused by loss-of-function mutations in NPC1, the functional ortholog of Ncr1p","termid":"PBO:0088129"}


id: PBO:0084946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional enzyme of the folic acid biosynthesis pathway; has dihydropteroate synthetase, dihydro-6-hydroxymethylpterin pyrophosphokinase, and dihydroneopterin aldolase activities","termid":"PBO:0084946"}


id: PBO:0012278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted)","termid":"PBO:0012278"}


id: PBO:0073155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit alpha 1","termid":"PBO:0073155"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: PBO:0066305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region","termid":"PBO:0066305"}


id: GO:0008154
data:
  {"annotated_genes":["SJAG_03025","SJAG_01268","SJAG_03380","SJAG_04982","SJAG_02245","SJAG_04703","SJAG_04100","SJAG_00279","SJAG_01943","SJAG_00521","SJAG_00677","SJAG_02700","SJAG_04479","SJAG_03086","SJAG_01993","SJAG_02566","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88679,97043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[64206,93858,94962,88466,89964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[88467,114690,84450,88651,95023,110419],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[85997,97869,98859,101266,86840],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93861,110422],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03380":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0008154","terms_by_termid":{"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0031528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031528"}


id: PBO:0067175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 231, pseudogene","termid":"PBO:0067175"}


id: PBO:0060788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C2","termid":"PBO:0060788"}


id: PBO:0034742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1 (predicted)","termid":"PBO:0034742"}


id: PBO:0078925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-1","termid":"PBO:0078925"}


id: GO:1903670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","PMID:16756958","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting angiogenesis","termid":"GO:1903670"}


id: PBO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 3","termid":"PBO:0061569"}


id: PR:O94544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leukotriene A-4 hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11533:SF4","PRO:DNx","OMA:SCHPO04625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.05c","secondary_identifiers":["UniProtKB:O94544"],"synonyms":[{"name":"LTA-4 hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LTA4H","type":"exact"},{"name":"leukotriene A(4) hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94544"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: PBO:0090598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Ipi1","termid":"PBO:0090598"}


id: GO:0018923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["UM-BBD_pathwayID:lim"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"limonene metabolic process","synonyms":[{"name":"limonene metabolism","type":"exact"}],"termid":"GO:0018923"}


id: PBO:0065966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51AP1 pseudogene 1","termid":"PBO:0065966"}


id: PBO:0068832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 70, pseudogene","termid":"PBO:0068832"}


id: PR:Q09196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light polypeptide 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain cdc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.08","secondary_identifiers":["UniProtKB:Q09196"],"synonyms":[{"name":"Spom972h-MYL6","type":"exact"}],"termid":"PR:Q09196"}


id: PBO:0069812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1098, pseudogene","termid":"PBO:0069812"}


id: PR:P79010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.02","synonyms":[{"name":"Spom972h-cox4","type":"exact"},{"name":"cytochrome c oxidase polypeptide IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79010"}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: GO:0008750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+.","definition_xrefs":["EC:1.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)+ transhydrogenase activity","termid":"GO:0008746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD(P)+ transhydrogenase (AB-specific) activity","secondary_identifiers":["MetaCyc:PYRNUTRANSHYDROGEN-RXN"],"synonyms":[{"name":"NAD(P) transhydrogenase (AB-specific) activity","type":"related"},{"name":"NADPH:NAD+ oxidoreductase (AB-specific)","type":"related"},{"name":"pyridine nucleotide transhydrogenase activity","type":"broad"},{"name":"transhydrogenase activity","type":"broad"}],"termid":"GO:0008750"}


id: PBO:0088839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog4","termid":"PBO:0088839"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["PubMed:12146974","RESID:AA0413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: FYPO:0001936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","termid":"FYPO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000654","FYPO:0002114","FYPO:0000138","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"decreased hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"decreased mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"decreased proton-transporting ATP synthase activity","type":"related"},{"name":"reduced mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"reduced proton-transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"FYPO:0001936"}


id: PBO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 1","termid":"PBO:0080145"}


id: GO:0021747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlear nucleus development","termid":"GO:0021747"}


id: PBO:0027064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_localization_phenotype","termid":"PBO:0027064"}


id: GO:0102602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16beta-hydroxy-beta-amyrin + O2 + H+ + NAD(P)H = 12,13beta-epoxy-16beta-hydroxy-beta-amyrin + H2O + NAD(P).","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cytochrome P450 dependent 16beta-hydroxy-beta-amyrin epoxidase activity","secondary_identifiers":["MetaCyc:RXN-15386"],"termid":"GO:0102602"}


id: PBO:0064421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepronociceptin","termid":"PBO:0064421"}


id: PBO:0077964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 17-1","termid":"PBO:0077964"}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: PBO:0029656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_premeiotic_DNA_replication","termid":"PBO:0029656"}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PomBase:mlr","PMID:36633091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: PBO:0040234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6","termid":"PBO:0040234"}


id: PBO:0056585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCUR1 pseudogene 1","termid":"PBO:0056585"}


id: PBO:0004607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit B, Dpb2","termid":"PBO:0004607"}


id: GO:0120328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic activity that acts to transfer a methyl group to a DNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:32437639","RHEA:68984","GOC:krc","PMID:31955845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0140097","GO:0016741"],"is_obsolete":false,"name":"ATP-dependent DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0120328"}


id: PBO:0059071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1 pseudogene 1","termid":"PBO:0059071"}


id: GO:0106408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP = 3',3'-c-di-AMP + 2 diphosphate.","definition_xrefs":["PMID:30884174","RHEA:35655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"diadenylate cyclase activity","secondary_identifiers":["EC:2.7.7.85","MetaCyc:RXN-14338"],"synonyms":[{"name":"cyclic-di-AMP synthase","type":"exact"}],"termid":"GO:0106408"}


id: GO:2001029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"regulates","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cellular glucuronidation","synonyms":[{"name":"regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001029"}


id: PR:O60110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER membrane protein complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein oca3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.01c","secondary_identifiers":["UniProtKB:O60110"],"synonyms":[{"name":"Spom972h-EMC2","type":"exact"},{"name":"overexpression-mediated cell cycle arrest protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60110"}


id: GO:0043541
data:
  {"annotated_genes":["SJAG_04821","SJAG_00924","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94475,94810,99691],"is_not":false,"summary":null,"term":"GO:0043541"}]},"cv_name":"cellular_component","definition":"A multienzyme, heterooligomeric complex involved in dolichyl-linked oligosaccharide synthesis. In yeast the complex is composed of Alg7p, which catalyzes the first step (GlcNAc1-PP-Dol from dolichol-phosphate and UDP-GlcNAc), and Alg13p plus Alg14p, the catalytic and anchoring subunits respectively, which together catalyze the second step (GlcNAc2-PP-dolichol from GlcNAc1-PP-Dol and UDP-GlcNAc) of dolichyl-linked oligosaccharide synthesis.","definition_xrefs":["PMID:19129246","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00924":null,"SJAG_03311":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043541","terms_by_termid":{"GO:0043541":null}}


id: PBO:0029580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_temperature","termid":"PBO:0029580"}


id: PBO:0058977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutL homolog 1","termid":"PBO:0058977"}


id: GO:2000913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"negatively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of galactoglucomannan catabolic process","synonyms":[{"name":"negative regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000913"}


id: PBO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_division_site","termid":"PBO:0030017"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: GO:0006339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0006339)","synonyms":[{"name":"positive regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0006339"}


id: SO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cassette pseudogene is a kind of gene in an inactive form which may recombine at a telomeric locus to form a functional copy.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_pseudogene","synonyms":[{"name":"cassette pseudogene","type":"exact"},{"name":"cassette type psedogene","type":"related"}],"termid":"SO:0001434"}


id: PBO:0075717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin pseudogene 1","termid":"PBO:0075717"}


id: PBO:0073526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 21","termid":"PBO:0073526"}


id: GO:0019510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"S-adenosylhomocysteine metabolic process","termid":"GO:0046498"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248","GO:0044281","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"S-adenosylhomocysteine catabolic process","secondary_identifiers":["MetaCyc:ADENOSYLHOMOCYSCAT-PWY"],"synonyms":[{"name":"S-adenosylhomocysteine breakdown","type":"exact"},{"name":"S-adenosylhomocysteine catabolism","type":"exact"},{"name":"S-adenosylhomocysteine degradation","type":"exact"}],"termid":"GO:0019510"}


id: PBO:0077407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 141","termid":"PBO:0077407"}


id: GO:0019709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0019709"}


id: PBO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harakiri, BCL2 interacting protein","termid":"PBO:0050569"}


id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["PMID:25675505","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: PBO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 2","termid":"PBO:0052408"}


id: PBO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in SREBP Cleavage","termid":"PBO:0006679"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: PBO:0053669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 850","termid":"PBO:0053669"}


id: PBO:0063597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 beta","termid":"PBO:0063597"}


id: GO:0036143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kringle domain. Kringle domains are protein domains that fold into large loops stabilized by 3 disulfide linkages, and are important in protein-protein interactions with blood coagulation factors.","definition_xrefs":["GOC:yaf","Wikipedia:Kringle_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kringle domain binding","termid":"GO:0036143"}


id: SO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Cosmid"],"synonyms":[{"name":"cosmid vector","type":"exact"}],"termid":"SO:0000156"}


id: PBO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide riboside kinase; catalyzes the phosphorylation of nicotinamide riboside and nicotinic acid riboside in salvage pathways for NAD+ biosynthesis","termid":"PBO:0085019"}


id: GO:0003382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"epithelial cell development","termid":"GO:0002064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis","termid":"GO:0003382"}


id: PBO:0059913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 36","termid":"PBO:0059913"}


id: RO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","termid":"RO:0002204"}


id: FYPO:0002992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature G1/S phase transition during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to MMS","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002992"}


id: PBO:0091065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom5","termid":"PBO:0091065"}


id: GO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligosaccharide-diphosphodolichol = dolichol-phosphate + oligosaccharide phosphate.","definition_xrefs":["MetaCyc:3.6.1.44-RXN","EC:3.6.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide-diphosphodolichol diphosphatase activity","secondary_identifiers":["RHEA:15205"],"synonyms":[{"name":"oligosaccharide-diphosphodolichol phosphodolichohydrolase activity","type":"related"},{"name":"oligosaccharide-diphosphodolichol pyrophosphatase activity","type":"exact"}],"termid":"GO:0047430"}


id: GO:0075004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a spore of the symbiont to its host via adhesion molecules, general stickiness etc. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont spore to host","synonyms":[{"name":"adhesion of symbiont spore to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075004"}


id: FYPO:0002392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein acetylation during vegetative growth","synonyms":[{"name":"abnormal protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002392"}


id: GO:0010981
data:
  {"annotated_genes":["SJAG_04666","SJAG_04771","SJAG_03705","SJAG_04668","SJAG_04462","SJAG_00610","SJAG_00424","SJAG_01787","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83712,88562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88548,86931,88564,101445,98966,113966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[85611,98968,88568,91070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell wall macromolecule metabolism. Cell wall macromolecule metabolic processes are the chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall macromolecule metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010981","terms_by_termid":{"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["GOC:krc","GOC:mtg_sensu","PMID:19110459","PMID:16140984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: SO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where there may have been an error in the assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_assembly_error","synonyms":[{"name":"possible assembly error","type":"exact"}],"termid":"SO:0000702"}


id: PBO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR20 family, Bun62","termid":"PBO:0002586"}


id: PBO:0077596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 7","termid":"PBO:0077596"}


id: PBO:0080614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 48","termid":"PBO:0080614"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["GOC:mah","PMID:15709772","PMID:12571227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"molybdopterin synthase complex","secondary_identifiers":["GO:0019009"],"synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: GO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from host early endosomes by lower lumenal pH and different protein composition. Host late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome","termid":"GO:0044184"}


id: GO:0014905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which non-proliferating myoblasts, after migrating to the site of injury, fuse into existing damaged fibers or fuse to myotubes to form new fibers, as part of the process of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fusion","termid":"GO:0007520"},{"relation_name":"part_of","term_name":"myotube differentiation involved in skeletal muscle regeneration","termid":"GO:0014908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fusion involved in skeletal muscle regeneration","termid":"GO:0014905"}


id: PBO:0081869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 808","termid":"PBO:0081869"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: PBO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 4","termid":"PBO:0050274"}


id: GO:0047503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-borneol + NAD+ = (1S,4S)-camphor + H+ + NADH.","definition_xrefs":["EC:1.1.1.227","RHEA:22128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(-)-borneol dehydrogenase activity","secondary_identifiers":["MetaCyc:--BORNEOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02945"],"synonyms":[{"name":"(-)-borneol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047503"}


id: GO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with vasopressin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"vasopressin receptor activity","secondary_identifiers":["GO:0016931"],"synonyms":[{"name":"vasopressin activated calcium mobilizing receptor activity","type":"narrow"}],"termid":"GO:0005000"}


id: GO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D5, (1S,3Z)-3-[(2E)-2-[(1R,3aS,7aR)-1-[(1R,4S)-4-ethyl-1,5-dimethylhexyl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylene-1-cyclohexanol.","definition_xrefs":["GOC:mah","GOC:BHF","PubChem_Compound:9547700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"vitamin D5 metabolic process","synonyms":[{"name":"vitamin D5 metabolism","type":"exact"}],"termid":"GO:0070642"}


id: PATO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000390 extreme (obsolete PATO:0000390)","termid":"PATO:0000390"}


id: PBO:0026633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation","termid":"PBO:0026633"}


id: PR:000050502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dis1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"SPCC736.14","type":"related"},{"name":"Spom-dis1","type":"exact"},{"name":"dis1","type":"related"},{"name":"phosphoprotein p99","type":"exact"}],"termid":"PR:000050502"}


id: PBO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Msa1","termid":"PBO:0001491"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: PBO:0066046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 2","termid":"PBO:0066046"}


id: GO:0102257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + H2O = 1-linoleoyl-sn-glycero-3-phosphocholine + hexadecanoate + H+.","definition_xrefs":["EC:3.1.1.32","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"1-16:0-2-18:2-phosphatidylcholine sn-1 acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12430"],"termid":"GO:0102257"}


id: PBO:0055449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2881","termid":"PBO:0055449"}


id: GO:0070597
data:
  {"annotated_genes":["SJAG_04666","SJAG_01028","SJAG_00424","SJAG_02278","SJAG_04236","SJAG_00610","SJAG_02916","SJAG_03057","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110480,113853,85321,100291,105191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[91070,88568,85611,98968],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070597","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: SO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_regulatory_region","synonyms":[{"name":"translation regulatory region","type":"exact"}],"termid":"SO:0001680"}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: PBO:0027913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027913"}


id: GO:1990848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of removal of reactive oxygen species in a cell.","definition_xrefs":["PMID:24118096"],"gene_count":0,"genotype_count":0,"name":"obsolete Positive regulation of removal of reactive oxygen species (obsolete GO:1990848)","termid":"GO:1990848"}


id: GO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane raft","termid":"GO:0044860"},{"relation_name":"is_a","term_name":"protein insertion into membrane raft","termid":"GO:0071210"},{"relation_name":"is_a","term_name":"protein insertion into plasma membrane","termid":"GO:0098737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into plasma membrane raft","termid":"GO:0044859"}


id: GO:0034504
data:
  {"annotated_genes":["SJAG_00840","SJAG_03593","SJAG_02592","SJAG_00968","SJAG_01449","SJAG_01621","SJAG_01013","SJAG_04645","SJAG_04148","SJAG_01789","SJAG_00383","SJAG_02998","SJAG_04411","SJAG_03470","SJAG_00375","SJAG_02210","SJAG_01374","SJAG_02274","SJAG_02757","SJAG_01084","SJAG_03299","SJAG_01328","SJAG_01311","SJAG_03729","SJAG_01083","SJAG_00065","SJAG_01185","SJAG_02520","SJAG_04366","SJAG_03986","SJAG_01655","SJAG_01584","SJAG_00093","SJAG_01909","SJAG_03048","SJAG_03453","SJAG_02425","SJAG_03907","SJAG_03002","SJAG_01065","SJAG_01834","SJAG_03959","SJAG_00586","SJAG_03693","SJAG_00471","SJAG_03300","SJAG_03662"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101912],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[110568],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1900181"},{"annotations":[114750,112513,99789,97271,87858,102259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[87007,90505,98506],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[102437,90418,85600,92260,109356,87108,111086,110557,111600,99120,101485,111894,91899,93965,99790,114751,96535,88068,102683,110988,111920,103888,101158,85186,98673,103041,104582,90130,106543,113334,89592,65510,99501,91110,85092,89535,98767,100675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[96536,102261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein transports or maintains the localization of another protein to the nucleus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00065":null,"SJAG_00093":null,"SJAG_00375":null,"SJAG_00383":null,"SJAG_00471":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01084":null,"SJAG_01185":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01584":null,"SJAG_01621":null,"SJAG_01655":null,"SJAG_01789":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02592":null,"SJAG_02757":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03048":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04366":null,"SJAG_04411":null,"SJAG_04645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044744"],"synonyms":[{"name":"protein localisation to nucleus","type":"exact"},{"name":"protein localization in cell nucleus","type":"exact"},{"name":"protein localization in nucleus","type":"exact"},{"name":"protein targeting to nucleus","type":"related"}],"termid":"GO:0034504","terms_by_termid":{"GO:0006606":null,"GO:0006607":null,"GO:0036228":null,"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: GO:0033195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkyl hydroperoxide","termid":"GO:0033195"}


id: GO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of petal number","termid":"GO:0048834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of increased petal number","termid":"GO:0048836"}


id: FYPO:0006456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis II","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis II","type":"exact"},{"name":"abolished protein localization to meiosis II spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis II","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis II","type":"exact"}],"termid":"FYPO:0006456"}


id: PBO:0077328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 64","termid":"PBO:0077328"}


id: GO:0032452
data:
  {"annotated_genes":["SJAG_03041","SJAG_03664","SJAG_03286","SJAG_01465","SJAG_03997","SJAG_03635","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83586,108340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[83588,92792,109170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[113819,108341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[99352,90221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a histone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylase activity","termid":"GO:0140457"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5661125","Reactome:R-HSA-4754176","Reactome:R-HSA-5625870","Reactome:R-HSA-5661115","Reactome:R-HSA-5661121","Reactome:R-HSA-5625848","Reactome:R-HSA-3214912","Reactome:R-HSA-4724284","Reactome:R-HSA-4724279","Reactome:R-HSA-5423117","Reactome:R-HSA-4722133","Reactome:R-HSA-4754181","Reactome:R-HSA-5661114","Reactome:R-HSA-4754187","Reactome:R-HSA-5661123","Reactome:R-HSA-5661120","Reactome:R-HSA-5625797","Reactome:R-HSA-5661122","Reactome:R-HSA-5661124","Reactome:R-HSA-5661116"],"termid":"GO:0032452","terms_by_termid":{"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: PATO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having distinct structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structured","termid":"PATO:0001411"}


id: GO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast proliferation","termid":"GO:0090289"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: FYPO:0007468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during G0","termid":"FYPO:0007467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation during G0","synonyms":[{"name":"increased histone H3 K9 dimethylation during G0","type":"exact"},{"name":"increased histone H3-K9 dimethylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 dimethylation during quiescence","type":"exact"},{"name":"increased histone H3K9me2 during G0","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation during G0","type":"exact"}],"termid":"FYPO:0007468"}


id: PBO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin coiled-coil domain containing","termid":"PBO:0048772"}


id: GO:0072500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0072500)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0072500"}


id: FYPO:0001135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased 35S rRNA precursor level","synonyms":[{"name":"increased 35S rRNA precursor accumulation","type":"related"},{"name":"increased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 35S rRNA precursor transcript level","type":"exact"},{"name":"increased 35S rRNA primary transcript level","type":"exact"}],"termid":"FYPO:0001135"}


id: PR:G2TRK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.22","synonyms":[{"name":"Spom972h-SPAC29A4.22","type":"exact"}],"termid":"PR:G2TRK2"}


id: PBO:0080473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 4","termid":"PBO:0080473"}


id: GO:0060194
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:jp","PMID:18075583","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060194","terms_by_termid":{"GO:0060195":null}}


id: PBO:0073080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex flavoprotein subunit A","termid":"PBO:0073080"}


id: MOD:01521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}


id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: PBO:0052551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C4","termid":"PBO:0052551"}


id: PBO:0060306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12B pseudogene 1","termid":"PBO:0060306"}


id: _global:has_output
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","secondary_identifiers":["RO:0002234"],"termid":"_global:has_output"}


id: PBO:0071813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 8","termid":"PBO:0071813"}


id: PBO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DBR1","termid":"PBO:0036270"}


id: GO:0038135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to a ERBB4 receptor on the surface of a cell, followed by transmission of the signal by a heterodimeric complex of ERBB2 and ERBB4. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB4.","definition_xrefs":["GOC:signaling","PMID:16460914","Reactome:R-HSA-1963589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB2 signaling pathway","termid":"GO:0038128"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB2-ERBB4 signaling pathway","synonyms":[{"name":"ERBB2-ERBB4 signalling pathway","type":"exact"},{"name":"HER2-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038135"}


id: PBO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1","termid":"PBO:0033831"}


id: GO:0000030
data:
  {"annotated_genes":["SJAG_03555","SJAG_04053","SJAG_01276","SJAG_04952","SJAG_00747","SJAG_04906","SJAG_03801","SJAG_05327","SJAG_00334","SJAG_02903","SJAG_00295","SJAG_03082","SJAG_01491","SJAG_00598","SJAG_00437","SJAG_03953","SJAG_03056","SJAG_04878","SJAG_02102","SJAG_01264","SJAG_04770","SJAG_03115","SJAG_04316","SJAG_02168","SJAG_00816","SJAG_02519","SJAG_03878","SJAG_01021","SJAG_06425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83704,85721,86898,91388,94024,101052,112232],"is_not":false,"summary":null,"term":"GO:0000030"},{"annotations":[94241,101166,102065,96886,100625,114426,111307,105137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000026"},{"annotations":[98419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000033"},{"annotations":[99164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051751"},{"annotations":[101051,83702,94023,83701,108805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000009"},{"annotations":[90038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"},{"annotations":[96110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[87277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[101103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[92561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004582"},{"annotations":[100205,97656,89166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004169"},{"annotations":[98420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[112833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[98422,83703,87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"},{"annotations":[99165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004376"},{"annotations":[91872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_00334":null,"SJAG_00437":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02102":null,"SJAG_02168":null,"SJAG_02519":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03115":null,"SJAG_03555":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04878":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_05327":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162797","Reactome:R-HSA-446198","Reactome:R-HSA-162830","Reactome:R-HSA-4720497"],"termid":"GO:0000030","terms_by_termid":{"GO:0000009":null,"GO:0000026":null,"GO:0000030":null,"GO:0000033":null,"GO:0004169":null,"GO:0004376":null,"GO:0004377":null,"GO:0004378":null,"GO:0004578":null,"GO:0004582":null,"GO:0033164":null,"GO:0051751":null,"GO:0052917":null,"GO:0052918":null,"GO:0052925":null,"GO:0052926":null,"GO:0103064":null}}


id: GO:0097276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular creatinine homeostasis (obsolete GO:0097276)","termid":"GO:0097276"}


id: PBO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO induced long non-coding RNA 1","termid":"PBO:0047627"}


id: PBO:0084935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA transport regulator; essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA","termid":"PBO:0084935"}


id: PR:P11620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.10","secondary_identifiers":["UniProtKB:P11620"],"synonyms":[{"name":"Spom972h-RAB1B","type":"exact"}],"termid":"PR:P11620"}


id: GO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + Neu5Gc = diphosphate + CMP-Neu5Gc.","definition_xrefs":["PMID:8381411","ISBN:978-1-60805-067-3","PMID:11479279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity","synonyms":[{"name":"CMP-Neu5Gc synthetase activity","type":"exact"}],"termid":"GO:0090632"}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["PMID:19539744","GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006629","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: GO:0070631
data:
  {"annotated_genes":["SJAG_05196","SJAG_01422","SJAG_02332","SJAG_03200","SJAG_01460","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99579,107538,108948,86299,96718,98940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[99580,86300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which a spindle pole body is transported to, or maintained in, a specific location. A spindle pole body is a type of microtubule organizing center found in fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071790","GO:1990944"],"synonyms":[{"name":"maintenance of spindle pole body localization","type":"narrow"},{"name":"spindle pole body localisation","type":"exact"}],"termid":"GO:0070631","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: GO:0047492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthan = oligosaccharide with 4-deoxy-alpha-L-threo-hex-4-enuronosyl end + pyruvylate mannose. This reaction is the eliminative cleavage of the terminal beta-D-mannosyl-beta-D-1,4-glucuronosyl linkage of the side-chain of the polysaccharide xanthan, leaving a 4-deoxy-alpha-L-threo-hex-4-enuronosyl group at the terminus of the side-chain.","definition_xrefs":["EC:4.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"xanthan lyase activity","secondary_identifiers":["MetaCyc:4.2.2.12-RXN"],"termid":"GO:0047492"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_05207","SJAG_01086","SJAG_02093","SJAG_03345","SJAG_01774","SJAG_00605","SJAG_03596","SJAG_04850","SJAG_02605","SJAG_04732","SJAG_04875","SJAG_04018","SJAG_01835","SJAG_00109","SJAG_00096","SJAG_01738","SJAG_03640","SJAG_01242","SJAG_00415","SJAG_02392","SJAG_04789","SJAG_02587","SJAG_02435","SJAG_05268","SJAG_02989","SJAG_01134","SJAG_00784","SJAG_00948","SJAG_03081","SJAG_04685","SJAG_04583","SJAG_01806","SJAG_01029","SJAG_04666","SJAG_05272","SJAG_02196","SJAG_04238","SJAG_04483","SJAG_04077","SJAG_04509","SJAG_01114","SJAG_00310","SJAG_00797","SJAG_00218","SJAG_02916","SJAG_02233","SJAG_02173","SJAG_03464","SJAG_02260","SJAG_04209","SJAG_00254","SJAG_03204","SJAG_02444","SJAG_01307","SJAG_00368","SJAG_04363","SJAG_02102","SJAG_00077","SJAG_00340","SJAG_04851","SJAG_04026","SJAG_01249","SJAG_01290","SJAG_00852"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84263,105418],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[90846,91214,105962,90035,101936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[100918,102694,85427,98623,100575,95378,111854,96641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[103148,106973,95099,88552,85896,84145,88718,102695,84078,98540,99846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[102696,91978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[102665,111685,103892,112365,113410,100117,114380,86091,98360,96931,90193,109142,86286,109847,87720,90968,90980,91411,90982,110572,110847,113839,90981,98368,98367,110472,88018,114818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[106651],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[96576,99883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[105127,102595,103242,90357],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[90848,95900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[92379,86126,89954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: GO:1900759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of D-amino-acid oxidase activity","termid":"GO:1900757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of D-amino-acid oxidase activity","synonyms":[{"name":"activation of D-amino-acid oxidase activity","type":"narrow"},{"name":"activation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"activation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"activation of new yellow enzyme","type":"related"},{"name":"positive regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"positive regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"positive regulation of new yellow enzyme","type":"related"},{"name":"up regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up regulation of new yellow enzyme","type":"related"},{"name":"up-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up-regulation of new yellow enzyme","type":"related"},{"name":"upregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"upregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"upregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"upregulation of new yellow enzyme","type":"related"}],"termid":"GO:1900759"}


id: PR:O13788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.10","synonyms":[{"name":"Spom972h-ssr1","type":"exact"}],"termid":"PR:O13788"}


id: GO:2000169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"}


id: PBO:0077557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM263 divergent transcript","termid":"PBO:0077557"}


id: FYECO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanolamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited ethanolamine","termid":"FYECO:0000169"}


id: GO:0061831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature spermatids and Sertoli cells at the luminal end of the Sertoli cell.","definition_xrefs":["PMID:22332112","PMID:23546604","GOC:dph","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical ectoplasmic specialization","synonyms":[{"name":"apical ES","type":"exact"}],"termid":"GO:0061831"}


id: PBO:0055751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA divergent activator of TBXT","termid":"PBO:0055751"}


id: PBO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assembly protein (predicted)","termid":"PBO:0009551"}


id: GO:2000798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"negatively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amniotic stem cell differentiation","termid":"GO:2000798"}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["PMID:9321918","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: PR:P87121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.05c","secondary_identifiers":["UniProtKB:P87121"],"synonyms":[{"name":"Spom972h-TAF2","type":"exact"},{"name":"TBP-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87121"}


id: GO:1900641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"negatively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of austinol biosynthetic process","synonyms":[{"name":"down regulation of austinol anabolism","type":"exact"},{"name":"down regulation of austinol biosynthesis","type":"exact"},{"name":"down regulation of austinol biosynthetic process","type":"exact"},{"name":"down regulation of austinol formation","type":"exact"},{"name":"down regulation of austinol synthesis","type":"exact"},{"name":"down-regulation of austinol anabolism","type":"exact"},{"name":"down-regulation of austinol biosynthesis","type":"exact"},{"name":"down-regulation of austinol biosynthetic process","type":"exact"},{"name":"down-regulation of austinol formation","type":"exact"},{"name":"down-regulation of austinol synthesis","type":"exact"},{"name":"downregulation of austinol anabolism","type":"exact"},{"name":"downregulation of austinol biosynthesis","type":"exact"},{"name":"downregulation of austinol biosynthetic process","type":"exact"},{"name":"downregulation of austinol formation","type":"exact"},{"name":"downregulation of austinol synthesis","type":"exact"},{"name":"inhibition of austinol anabolism","type":"exact"},{"name":"inhibition of austinol biosynthesis","type":"exact"},{"name":"inhibition of austinol biosynthetic process","type":"narrow"},{"name":"inhibition of austinol formation","type":"exact"},{"name":"inhibition of austinol synthesis","type":"exact"},{"name":"negative regulation of austinol anabolism","type":"exact"},{"name":"negative regulation of austinol biosynthesis","type":"exact"},{"name":"negative regulation of austinol formation","type":"exact"},{"name":"negative regulation of austinol synthesis","type":"exact"}],"termid":"GO:1900641"}


id: GO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"},{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory system process","termid":"GO:0044065"}


id: GO:2000699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000699"}


id: PR:P54874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hcs1 gene.","definition_xrefs":["UniProtKB:P54874","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.14c","synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMG-CoA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hcs1","type":"exact"}],"termid":"PR:P54874"}


id: PBO:0059069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor sulfurase","termid":"PBO:0059069"}


id: PBO:0088344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor (GTPase) Mtg2","termid":"PBO:0088344"}


id: PBO:0060054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 1","termid":"PBO:0060054"}


id: PBO:0108542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)site selection protein Seb1","termid":"PBO:0108542"}


id: PBO:0024821
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GEN1","termid":"PBO:0024821"}


id: GO:0015566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acriflavin from one side of a membrane to the other. Acriflavin is a fluorescent dye used as a local antiseptic and also as a biological stain. It intercalates into nucleic acids thereby inhibiting bacterial and viral replication.","definition_xrefs":["PubChem_Compound:6842"],"gene_count":0,"genotype_count":0,"name":"obsolete acriflavine transmembrane transporter activity (obsolete GO:0015566)","synonyms":[{"name":"acriflavin resistant pump activity","type":"related"},{"name":"acriflavin transporter activity","type":"related"},{"name":"acriflavine transporter activity","type":"related"}],"termid":"GO:0015566"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: GO:1990241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that interacts selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. An example of this is STING in E. coli (Q86WV6).","definition_xrefs":["GOC:bhm","PMID:23910378"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide binding complex (obsolete GO:1990241)","synonyms":[{"name":"nucleotide binding complex","type":"exact"}],"termid":"GO:1990241"}


id: PBO:0062979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 1","termid":"PBO:0062979"}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: GO:1903068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["PMID:24554432","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell tip","synonyms":[{"name":"activation of protein localisation to cell tip","type":"narrow"},{"name":"activation of protein localization to cell tip","type":"narrow"},{"name":"positive regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localization to cell tip","type":"exact"},{"name":"up-regulation of protein localisation to cell tip","type":"exact"},{"name":"up-regulation of protein localization to cell tip","type":"exact"},{"name":"upregulation of protein localisation to cell tip","type":"exact"},{"name":"upregulation of protein localization to cell tip","type":"exact"}],"termid":"GO:1903068"}


id: PBO:0084193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT1); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage","termid":"PBO:0084193"}


id: PBO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q4","termid":"PBO:0043659"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10735857","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: PBO:0091500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Per1","termid":"PBO:0091500"}


id: FYPO:0004793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during mitosis.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic M phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during M phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during mitotic M phase","type":"related"},{"name":"reduced telomere-nuclear envelope distance during mitosis","type":"exact"}],"termid":"FYPO:0004793"}


id: PBO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2525","termid":"PBO:0055107"}


id: PBO:0067112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 154, pseudogene","termid":"PBO:0067112"}


id: GO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart.","definition_xrefs":["MSH:D001158","MA:0000708","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery smooth muscle contraction","termid":"GO:0014824"}


id: PBO:0085920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau1p","termid":"PBO:0085920"}


id: GO:0044076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism activates or increases the frequency, rate or extent of vacuole organization in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host vacuole organization (obsolete GO:0044076)","synonyms":[{"name":"positive regulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"positive regulation by symbiont of host vacuole organisation","type":"exact"},{"name":"positive regulation of host vacuole organization by symbiont","type":"exact"}],"termid":"GO:0044076"}


id: MOD:01742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01742"}


id: GO:0140346
data:
  {"annotated_genes":["SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95600,108608],"is_not":false,"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:11870854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminophospholipid flippase activity","termid":"GO:0015247"},{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"phosphatidylserine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140346","terms_by_termid":{"GO:0140346":null}}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: GO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propanediol, CH3-CHOH-CH2OH, a sweet, colorless, viscous, hygroscopic liquid used as an antifreeze, in brake fluid and as a humectant in cosmetics and personal care items.","definition_xrefs":["PMID:15995211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propanediol metabolic process","synonyms":[{"name":"1,2-dihydroxypropane metabolic process","type":"exact"},{"name":"1,2-dihydroxypropane metabolism","type":"exact"},{"name":"propanediol metabolism","type":"exact"},{"name":"propylene glycol metabolic process","type":"exact"},{"name":"propylene glycol metabolism","type":"exact"}],"termid":"GO:0051143"}


id: GO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. For example, viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.","definition_xrefs":["PMID:10388655","PMID:19109390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host IRF9 activity","secondary_identifiers":["VZ:683"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"inhibition of host IRF9 by virus","type":"narrow"},{"name":"inhibition of host interferon regulatory factor-9 by virus","type":"narrow"},{"name":"suppression by virus of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host interferon regulatory factor 9 activity","type":"narrow"}],"termid":"GO:0039560"}


id: PBO:0046919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member C, pseudogene","termid":"PBO:0046919"}


id: PBO:0072031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 1","termid":"PBO:0072031"}


id: FYPO:0000091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to thiabendazole. Cells stop growing (and may die) at a concentration of thiabendazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to thiabendazole","synonyms":[{"name":"hypersensitive to thiabendazole","type":"exact"},{"name":"sensitive to TBZ","type":"exact"},{"name":"sensitive to thiabendazole during mitotic cell cycle","type":"related"},{"name":"sensitive to thiabendazole during vegetative growth","type":"exact"}],"termid":"FYPO:0000091"}


id: PBO:0109281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTRES1 pseudogene 2","termid":"PBO:0109281"}


id: PBO:0087770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; member of t-Utp subcomplex involved with transcription of 35S rRNA transcript; Small Subunit processome is also known as SSU processome","termid":"PBO:0087770"}


id: GO:0018808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate + H2O = pyruvate + 1-hydroxy-2-naphthaldehyde.","definition_xrefs":["UM-BBD_reactionID:r0484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate hydratase-aldolase activity","termid":"GO:0018808"}


id: PBO:0018073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase Cyc3 (predicted)","termid":"PBO:0018073"}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["EC:6.3.5.6","MetaCyc:6.3.5.6-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)","RHEA:14513"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: PBO:0040157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 3","termid":"PBO:0040157"}


id: PBO:0048243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12D","termid":"PBO:0048243"}


id: FYPO:0003799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) in cells that are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding during recovery from nitrogen starvation","synonyms":[{"name":"normal chromatin binding during recovery from nitrogen depletion","type":"exact"},{"name":"normal chromatin binding during recovery from nitrogen deprivation","type":"related"}],"termid":"FYPO:0003799"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: GO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD86, a CD marker that occurs on antigen presenting cells that provides co-stimulatory signals necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD86 biosynthetic process","synonyms":[{"name":"CD86 anabolism","type":"exact"},{"name":"CD86 biosynthesis","type":"exact"},{"name":"CD86 formation","type":"exact"},{"name":"CD86 synthesis","type":"exact"}],"termid":"GO:0035781"}


id: PBO:0029276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_origin_recognition_complex_assembly","termid":"PBO:0029276"}


id: PBO:0072423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 28","termid":"PBO:0072423"}


id: PR:O43048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C215.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.01","synonyms":[{"name":"Spom972h-SPBC215.01","type":"exact"}],"termid":"PR:O43048"}


id: SO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element with extensive secondary structure, characterized by large modular imperfect long inverted repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foldback_element","synonyms":[{"name":"LVR element","type":"related"},{"name":"foldback element","type":"exact"},{"name":"long inverted repeat element","type":"related"}],"termid":"SO:0000238"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: GO:0015054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gastrin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gastrin receptor activity","synonyms":[{"name":"cholecystokinin-B receptor activity","type":"related"}],"termid":"GO:0015054"}


id: PBO:0045899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 lysine methyltransferase","termid":"PBO:0045899"}


id: PBO:0057381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aw","termid":"PBO:0057381"}


id: GO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the adrenal cortex. This process pertains to the initial formation of a structure from unspecified parts. The adrenogonadal primordium from which the adrenal cortex is formed derives from a condensation of coelomic epithelial cells (the urogenital ridge; the same structure from which gonads and kidney also originate).","definition_xrefs":["PMID:12185666","PMID:21115154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"adrenal cortex development","termid":"GO:0035801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex formation","synonyms":[{"name":"adrenal gland cortex formation","type":"exact"}],"termid":"GO:0035802"}


id: GO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cytokine production contributing to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"negatively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002740","GO:0002743"],"synonyms":[{"name":"down regulation of cytokine production during immune response","type":"related"},{"name":"down-regulation of cytokine production during immune response","type":"exact"},{"name":"downregulation of cytokine production during immune response","type":"related"},{"name":"inhibition of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"negative regulation of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002719"}


id: PBO:0047678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin B","termid":"PBO:0047678"}


id: PBO:0039109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein 2","termid":"PBO:0039109"}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: PBO:0041260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 230","termid":"PBO:0041260"}


id: PBO:0059940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 26","termid":"PBO:0059940"}


id: PBO:0059003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated D","termid":"PBO:0059003"}


id: GO:0160029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a kidney cortex tubule cell (specialized epithelial cell of the kidney) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:18987110","PMID:31847447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney cortex tubule cell dedifferentiation","termid":"GO:0160029"}


id: GO:0071540
data:
  {"annotated_genes":["SJAG_02376","SJAG_02164","SJAG_03472","SJAG_04744","SJAG_04981","SJAG_02628","SJAG_02995","SJAG_03147"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90918,93866,93924,95053,101419,101712,106811,107442],"is_not":false,"summary":null,"term":"GO:0071540"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3e.","definition_xrefs":["PMID:19061185","PMID:15904532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3e","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF3e-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071540","terms_by_termid":{"GO:0071540":null}}


id: PBO:0048965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1","termid":"PBO:0048965"}


id: GO:0033166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multilayered extraembryonic matrix that functions as a substrate for cell adhesion through early development. It is thought to protect and lubricate the embryo, stabilize the blastomeres during morphogenesis, and regulate nutrient intake. The major constituent of the hyaline layer is the protein hyalin. This matrix has been found in echinoderms.","definition_xrefs":["PMID:1721506","PMID:9473317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyaline layer","termid":"GO:0033166"}


id: PBO:0084256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol phosphatase involved in inositol pyrophosphate metabolism; hydrolyzes the beta-phosphate from the 5-diphosphate group of PP-InsPs including: 5PP-IP5 (IP7), 1,5PP-IP4 (IP8) and 5-PP-InsP4; functions as an anti-prion (anti-[PSI]) component; member of the atypical dual-specificity subgroup of the protein tyrosine-phosphatase (PTP) superfamily; localizes to the cytoplasm","termid":"PBO:0084256"}


id: PBO:0111518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family member 1","termid":"PBO:0111518"}


id: PBO:0082477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP (cyclase-associated protein); N-terminus binds adenylate cyclase and facilitates activation by RAS; N-terminus forms novel hexameric star-shaped shuriken structures that directly catalyze cofilin-mediated severing of actin filaments; C-terminus binds and recycles cofilin bound, ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis; N- and C-termini can function as physically separate proteins; mCAP1 is the mouse homolog","termid":"PBO:0082477"}


id: PR:P0CT62
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.04","synonyms":[{"name":"Spom972h-rps3001","type":"exact"}],"termid":"PR:P0CT62"}


id: PBO:0080342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 106 pseudogene","termid":"PBO:0080342"}


id: PBO:0041607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase activity and apoptosis inhibitor 1","termid":"PBO:0041607"}


id: PBO:0086696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localized to the membranes; gene expression regulated by copper levels","termid":"PBO:0086696"}


id: PR:O13998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An obg-like ATPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01661","PANTHER:PTHR23305:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.03c","secondary_identifiers":["UniProtKB:O13998"],"synonyms":[{"name":"Spom972h-OLA1","type":"exact"}],"termid":"PR:O13998"}


id: GO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045878"],"synonyms":[{"name":"activation of smoothened signaling pathway","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway","type":"exact"},{"name":"positive regulation of hh signaling pathway","type":"exact"},{"name":"positive regulation of smoothened by patched","type":"related"},{"name":"positive regulation of smoothened receptor activity by patched","type":"related"},{"name":"positive regulation of smoothened signalling pathway","type":"exact"},{"name":"stimulation of smoothened signaling pathway","type":"narrow"},{"name":"up regulation of smoothened signaling pathway","type":"exact"},{"name":"up-regulation of smoothened signaling pathway","type":"exact"},{"name":"upregulation of smoothened signaling pathway","type":"exact"}],"termid":"GO:0045880"}


id: FYPO:0007703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26443240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"abolished protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell side during glucose starvation","type":"related"},{"name":"abolished protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"abolished protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"protein localization to lateral cell cortex during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0007703"}


id: FYPO:0008104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36799444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cortical endoplasmic reticulum","termid":"FYPO:0008104"}


id: GO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell tolerance induction","synonyms":[{"name":"regulation of NK cell tolerance induction","type":"exact"}],"termid":"GO:0002871"}


id: PR:O94532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein diaphanous homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04539","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.05","secondary_identifiers":["UniProtKB:O94532"],"synonyms":[{"name":"Spom972h-DIAPH1","type":"exact"}],"termid":"PR:O94532"}


id: PBO:0082281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endosome transport; physically interacts with AP-1; similar to the mammalian p200; may interact with ribosomes; YJL207C is a non-essential gene","termid":"PBO:0082281"}


id: GO:0106095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that catalyzes the reaction: 7-methylguanosine-5'-triphospho-5'-pholynucleotide + H20 = 7-methylguanosine-5'-phosphate + polynucleotide.","definition_xrefs":["GOC:lnp","PMID:26258763","PMID:22985415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"m7G(5')pppN diphosphatase complex","synonyms":[{"name":"7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase enzyme","type":"exact"},{"name":"DCS1 decapping scavenger complex","type":"exact"},{"name":"M(7)G(5')pppN pyrophosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN diphosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN pyrophosphatase enzyme","type":"exact"}],"termid":"GO:0106095"}


id: PBO:0056422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate pseudogene 1","termid":"PBO:0056422"}


id: GO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.","definition_xrefs":["ISBN:0395825172","GOC:jl","GOC:mah","PMID:11867431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic membrane","termid":"GO:0034357"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore membrane","termid":"GO:0042717"}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


