# terms

id: GO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-glutamine residues by deamidation and esterification with omega-hydroxyceramide.","definition_xrefs":["PMID:10411887","RESID:AA0347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester biosynthetic process from peptidyl-glutamine","secondary_identifiers":["RESID:AA0340"],"synonyms":[{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester anabolism from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester formation from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester synthesis from peptidyl-glutamine","type":"exact"}],"termid":"GO:0050496"}


id: GO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central T cell tolerance induction","synonyms":[{"name":"central T lymphocyte tolerance induction","type":"exact"},{"name":"central T-cell tolerance induction","type":"exact"},{"name":"central T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002512"}


id: PBO:0069635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 912, pseudogene","termid":"PBO:0069635"}


id: PBO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helix-Extension-Helix domain protein","termid":"PBO:0001431"}


id: PBO:0075198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 10","termid":"PBO:0075198"}


id: PBO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit delta","termid":"PBO:0048206"}


id: GO:0140116
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96941,109851],"is_not":false,"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The directed movement of fluoride ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:27327046","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"is_a","term_name":"fluoride transmembrane transport","termid":"GO:1903424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fluoride export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140116","terms_by_termid":{"GO:0140116":null}}


id: PBO:0108598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_changes_to_anatomical_or_cellular_structure","termid":"PBO:0108598"}


id: PBO:0053245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 1","termid":"PBO:0053245"}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: GO:0022865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables electron flow across a biological membrane, from donors localized on one side of the membrane to acceptors localized on the other side. These systems contribute to or subtract from the membrane potential, depending on the direction of electron flow. They are therefore important to cellular energetics.","definition_xrefs":["TC:5","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane electron transfer carrier (obsolete GO:0022865)","termid":"GO:0022865"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: PBO:0048646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 6","termid":"PBO:0048646"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: PBO:0058263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4641","termid":"PBO:0058263"}


id: PBO:0088879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41 type 2a phosphatase regulator Tip41","termid":"PBO:0088879"}


id: GO:1902823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["PMID:23949442","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of late endosome to lysosome transport","synonyms":[{"name":"down regulation of late endosome to lysosome transport","type":"exact"},{"name":"down-regulation of late endosome to lysosome transport","type":"exact"},{"name":"downregulation of late endosome to lysosome transport","type":"exact"},{"name":"inhibition of late endosome to lysosome transport","type":"narrow"}],"termid":"GO:1902823"}


id: PBO:0078864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC7 antisense RNA 1","termid":"PBO:0078864"}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: PBO:0026782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026782"}


id: GO:0045187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sleep; a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle","termid":"GO:0042749"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"regulation of sleep","type":"exact"}],"termid":"GO:0045187"}


id: PBO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pc","termid":"PBO:0005867"}


id: PBO:0072669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 2","termid":"PBO:0072669"}


id: PBO:0076431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 7","termid":"PBO:0076431"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: PBO:0052821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 87, pseudogene","termid":"PBO:0052821"}


id: GO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion","synonyms":[{"name":"cellular response to zinc","type":"exact"}],"termid":"GO:0071294"}


id: GO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation; it is not a posttranslational modification of peptidyl-cysteine.","definition_xrefs":["RESID:AA0022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational readthrough","termid":"GO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"selenocysteine incorporation","termid":"GO:0001514"}


id: SO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, -90 degrees psi +120 degrees < +40 degrees, residue(i+1): -140 degrees < phi < -20 degrees, -90 < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_one","secondary_identifiers":["BS:00234"],"synonyms":[{"name":"st turn left handed type one","type":"exact"},{"name":"st_turn_il","type":"exact"}],"termid":"SO:0001142"}


id: GO:0097530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a granulocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:cvs","PMID:24163421","PMID:24193336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte migration","termid":"GO:0097530"}


id: MOD:00689
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two cysteine residues by formation of a disulfide bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multisulfide crosslinked residues","termid":"MOD:01619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disulfide crosslinked residues","termid":"MOD:00689"}


id: PBO:0013795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A2","termid":"PBO:0013795"}


id: PBO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD1 gamma-tubulin ring complex targeting factor","termid":"PBO:0060832"}


id: GO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more alpha-linked glutamyl units to the gamma carboxyl group of peptidyl-glutamic acid.","definition_xrefs":["RESID:AA0202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyglutamylation","termid":"GO:0018095"}


id: GO:1990981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site involved in cell separation after cytokinesis (obsolete GO:1990981)","termid":"GO:1990981"}


id: GO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylputrescine + H2O + O2 = N-methylaminobutanal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:RXN-8244","PMID:17283012","PMID:24287136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylputrescine oxidase activity","secondary_identifiers":["KEGG_REACTION:R05334","EC:1.4.3.22"],"synonyms":[{"name":"N-methylputrescine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052599"}


id: GO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem I.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloroplast photosystem I binding","termid":"GO:0062067"}


id: PBO:0062703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 2","termid":"PBO:0062703"}


id: GO:0032535
data:
  {"annotated_genes":["SJAG_04982","SJAG_01894","SJAG_03401","SJAG_00521","SJAG_04479","SJAG_00279","SJAG_02700","SJAG_01805","SJAG_01993","SJAG_04703","SJAG_02566","SJAG_00409","SJAG_01943","SJAG_04100","SJAG_04332","SJAG_02532","SJAG_03086","SJAG_02019","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84450,110419,88467,88651,95023,114690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[110031,91823,101799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[88547,102604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[89941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[85997,98859,86840,101266,97869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[90677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[93861,110422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that modulates the size of a cellular component.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00409":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular component size","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032535","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0042989":null,"GO:0045793":null,"GO:0051016":null}}


id: GO:0007433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in a larval organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007433"}


id: GO:0019948
data:
  {"annotated_genes":["SJAG_02082","SJAG_05032","SJAG_00604"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92340,93896,100592],"is_not":false,"summary":null,"term":"GO:0019948"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the proteolytically processed small ubiquitin-related modifier SUMO, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["PMID:10187858","PMID:11265250","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"SUMO activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993781","Reactome:R-HSA-2993784","Reactome:R-HSA-2990833","GO:0017115"],"synonyms":[{"name":"SMT3 activating enzyme","type":"exact"},{"name":"SUMO E1 activator enzyme","type":"exact"}],"termid":"GO:0019948","terms_by_termid":{"GO:0019948":null}}


id: GO:2000564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"}


id: PBO:0077634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 2","termid":"PBO:0077634"}


id: PBO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV stimulated scaffold protein A","termid":"PBO:0080116"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: GO:1902976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in meiotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0065003","GO:0006260","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"premeiotic DNA replication preinitiation complex assembly","synonyms":[{"name":"DNA replication preinitiation complex formation involved in meiotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in meiotic cell cycle","type":"exact"}],"termid":"GO:1902976"}


id: GO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asperthecin biosynthetic process","synonyms":[{"name":"asperthecin biosynthesis","type":"exact"},{"name":"asperthecin formation","type":"exact"},{"name":"asperthecin synthesis","type":"exact"}],"termid":"GO:0036184"}


id: GO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + stigmasterol = UDP + O-glucosyl-stigmasterol.","definition_xrefs":["RHEA:61828","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 3-beta-glucosyltransferase activity","termid":"GO:0016906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stigmasterol UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12126"],"termid":"GO:0051508"}


id: FYPO:0002197
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115220,115215,115226,115252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115255,115262,115256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is viable, and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":7,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_01794","SJAG_04280","SJAG_03453","SJAG_02819","SJAG_03581","SJAG_03048"],"single_locus_genotype_uniquenames":["scd2delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta","gef1delta","scd1delta","ras1delta"],"synonyms":[{"name":"viable lumpy cell","type":"related"},{"name":"viable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"viable, abnormal cell shape during vegetative growth","type":"exact"}],"termid":"FYPO:0002197","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0086367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alternate subunit of succinate dehydrogenase (SDH); mitochondrial inner membrane protein; genetic interaction with SDH4 suggests that Shh4p can function as a functional SDH subunit; a fraction copurifies with SDH subunit Sdh3p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner; Shh4p has greater similarity to human SDHD (subunit D of SDH, implicated in paraganglioma) than does its paralog Sdh4p","termid":"PBO:0086367"}


id: GO:1905283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:23069713","GOC:TermGenie","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"down regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905283"}


id: GO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of C-type lectin to its receptor on the surface of a target cell, and resulting in cellular activation.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"cellular response to lectin","termid":"GO:1990858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory C-type lectin receptor signaling pathway","synonyms":[{"name":"stimulatory C-type lectin receptor signalling pathway","type":"exact"},{"name":"stimulatory Ly49 family receptor signaling pathway","type":"narrow"}],"termid":"GO:0002223"}


id: GO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory system development","termid":"GO:0048880"}


id: PBO:0031692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport","termid":"PBO:0031692"}


id: PR:Q9P6L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.08","synonyms":[{"name":"Spom972h-srb8","type":"exact"},{"name":"mediator complex subunit 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6L8"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["EC:2.4.1.128","RHEA:20453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03594","MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: PBO:0065024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 3","termid":"PBO:0065024"}


id: GO:0075131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host protein kinase-mediated signal transduction (obsolete GO:0075131)","termid":"GO:0075131"}


id: GO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galacturonate + H2O + NAD+ = galactarate + 2 H+ + NADH.","definition_xrefs":["EC:1.1.1.203","RHEA:22404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uronate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01981","MetaCyc:URONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"uronate: NAD-oxidoreductase activity","type":"related"},{"name":"uronate:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"uronic acid dehydrogenase activity","type":"related"}],"termid":"GO:0050388"}


id: GO:0033788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-catechin + NADP+ + H2O = 2,3-trans-3,4-cis-leucocyanidin + NADPH + H+.","definition_xrefs":["EC:1.17.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"leucoanthocyanidin reductase activity","secondary_identifiers":["MetaCyc:RXN-1484","RHEA:10616"],"synonyms":[{"name":"(2R,3S)-catechin:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"leucocyanidin reductase activity","type":"related"}],"termid":"GO:0033788"}


id: PBO:0045731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 1","termid":"PBO:0045731"}


id: PBO:0077327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63C","termid":"PBO:0077327"}


id: GO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telium development","termid":"GO:0075275"}


id: PBO:0059267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 1","termid":"PBO:0059267"}


id: PBO:0043964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma S","termid":"PBO:0043964"}


id: PBO:0040881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 6","termid":"PBO:0040881"}


id: PBO:0073781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 3","termid":"PBO:0073781"}


id: PBO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034438"}


id: PBO:0049801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin neuropeptide precursor","termid":"PBO:0049801"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: GO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ventral aorta are generated and organized. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["GOC:dgh","Wikipedia:Aorta","ZFA:0000604","UBERON:0003085","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"ventral aorta development","termid":"GO:0035908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta morphogenesis","termid":"GO:0035913"}


id: PBO:0054942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2356","termid":"PBO:0054942"}


id: PR:Q10329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pre6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.16","synonyms":[{"name":"Spom972h-pre6","type":"exact"}],"termid":"PR:Q10329"}


id: PBO:0048436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)","termid":"PBO:0048436"}


id: PBO:0087947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF-4B; RNA recognition motif containing single-stranded RNA binding protein that possesses RNA annealing and strand-exchange activities; stimulates the ATPase and unwinding activities of the RNA helicase eIF4A, in a synergistic manner with eIF4G; promotes assembly of the translation initiation factor complex eIF4F and the 48S preinitiation complex; interacts with Rps20p at the head of the 40S ribosomal subunit and alters the structure of the mRNA entry channel","termid":"PBO:0087947"}


id: PBO:0082199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082199"}


id: PBO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst4","termid":"PBO:0017640"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-lysine N2-acetylation","termid":"GO:0017195"}


id: PBO:0080508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl tRNA synthetase 2, mitochondrial","termid":"PBO:0080508"}


id: PBO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member D, pseudogene","termid":"PBO:0047153"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: PBO:0029917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_squalene_level","termid":"PBO:0029917"}


id: PBO:0110491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 6","termid":"PBO:0110491"}


id: GO:0045141
data:
  {"annotated_genes":["SJAG_05260","SJAG_01538","SJAG_05196","SJAG_00756","SJAG_03287","SJAG_03092","SJAG_05226","SJAG_03680","SJAG_01263","SJAG_03685","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83595,92854,102053,112037,113623,113758],"is_not":false,"summary":null,"term":"GO:0045141"},{"annotations":[85933,102052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[98939,96033,101203,83594,85934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[102054,110093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the dynamic reorganization of telomeres occurs in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body. This plays an important role in progression through meiosis and precedes synapsis.","definition_xrefs":["PMID:10690419","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","termid":"GO:0090220"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"bouquet biosynthesis","type":"narrow"},{"name":"bouquet formation","type":"narrow"}],"termid":"GO:0045141","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: GO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of norepinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003118"}


id: GO:1901002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to salt stress.","definition_xrefs":["GOC:TermGenie","PMID:22627139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"positively_regulates","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to salt stress","synonyms":[{"name":"activation of response to ionic osmotic stress","type":"exact"},{"name":"activation of response to salt stress","type":"narrow"},{"name":"activation of salinity response","type":"exact"},{"name":"positive regulation of response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of salinity response","type":"exact"},{"name":"up regulation of response to ionic osmotic stress","type":"exact"},{"name":"up regulation of response to salt stress","type":"exact"},{"name":"up regulation of salinity response","type":"exact"},{"name":"up-regulation of response to ionic osmotic stress","type":"exact"},{"name":"up-regulation of response to salt stress","type":"exact"},{"name":"up-regulation of salinity response","type":"exact"},{"name":"upregulation of response to ionic osmotic stress","type":"exact"},{"name":"upregulation of response to salt stress","type":"exact"},{"name":"upregulation of salinity response","type":"exact"}],"termid":"GO:1901002"}


id: PBO:0078505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 2","termid":"PBO:0078505"}


id: PBO:0054777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2190","termid":"PBO:0054777"}


id: GO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of specific genes or sets of genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete specific transcriptional repressor activity (obsolete GO:0016566)","synonyms":[{"name":"specific transcriptional repressor activity","type":"exact"}],"termid":"GO:0016566"}


id: GO:0021607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve morphogenesis","synonyms":[{"name":"CN XI morphogenesis","type":"related"}],"termid":"GO:0021607"}


id: PBO:0055579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3015","termid":"PBO:0055579"}


id: PBO:0034473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_saturation","termid":"PBO:0034473"}


id: GO:1901503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether biosynthetic process","synonyms":[{"name":"ether anabolism","type":"exact"},{"name":"ether biosynthesis","type":"exact"},{"name":"ether formation","type":"exact"},{"name":"ether synthesis","type":"exact"}],"termid":"GO:1901503"}


id: PBO:0051959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 2","termid":"PBO:0051959"}


id: PBO:0067392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 497, pseudogene","termid":"PBO:0067392"}


id: PR:Q9USW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps402 gene.","definition_xrefs":["UniProtKB:Q9USW5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.10","synonyms":[{"name":"Spom972h-rps402","type":"exact"}],"termid":"PR:Q9USW5"}


id: GO:0019700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic phosphonate catabolic process","synonyms":[{"name":"organophosphonate catabolic process","type":"related"},{"name":"phosphonate breakdown","type":"exact"},{"name":"phosphonate catabolism","type":"exact"},{"name":"phosphonate degradation","type":"exact"}],"termid":"GO:0019700"}


id: GO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075332)","termid":"GO:0075332"}


id: PBO:0080366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 21 pseudogene","termid":"PBO:0080366"}


id: GO:0102528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 7,8,4'-trihydroxyflavone = H+ + S-adenosyl-L-homocysteine + 7,4'-dihydroxy, 8-methoxyflavone.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"7,8,4'-trihydroxyflavone methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14658"],"termid":"GO:0102528"}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: SO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological DNA region implicated in epigenomic changes caused by mechanisms other than changes in the underlying DNA sequence. This includes, nucleosomal histone post-translational modifications, nucleosome depletion to render DNA accessible and post-replicational base modifications such as cytosine modification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_region","synonyms":[{"name":"epigenetically modified region","type":"related"}],"termid":"SO:0001720"}


id: PBO:0062700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 1","termid":"PBO:0062700"}


id: PBO:0075915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 7","termid":"PBO:0075915"}


id: FYPO:0005676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, does not occur after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished proteolysis during vegetative growth","termid":"FYPO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"abolished protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"abolished protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"abolished protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"abolished protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"},{"name":"protein deubiquitination following cellular response to methyl methanesulfonate abolished","type":"exact"}],"termid":"FYPO:0005676"}


id: RO:HOM0000027
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves structures arranged along the main body axis.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_serial_homology_relationship_with","synonyms":[{"name":"homonomy","type":"related"},{"name":"serial homologous to","type":"exact"}],"termid":"RO:HOM0000027"}


id: GO:0102426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin 3-O-beta-D-glucopyranoside + UDP-alpha-D-glucose = myricetin 3-O-gentiobioside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"myricetin-3-O-glucoside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13823"],"termid":"GO:0102426"}


id: PBO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, implicated in isoleucine biosynthesis (predicted)","termid":"PBO:0002985"}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: GO:0018426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine. The polypeptide backbones of glycoproteins and mucin-like proteoglycans are extensively modified with a complex array of phosphoglycan chains that are linked to Ser/Thr-rich domains via a common Man-alpha1-phosphate-Ser linkage.","definition_xrefs":["RESID:AA0297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphate-linked glycosylation via serine","termid":"GO:0042077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthetic process","synonyms":[{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine anabolism","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthesis","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine formation","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine synthesis","type":"exact"}],"termid":"GO:0018426"}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: GO:0045483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans,trans-farnesyl diphosphate = aristolochene + diphosphate.","definition_xrefs":["EC:4.2.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aristolochene synthase activity","secondary_identifiers":["MetaCyc:ARISTOLOCHENE-SYNTHASE-RXN","RHEA:19825"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, aristolochene-forming)","type":"related"},{"name":"sesquiterpene cyclase activity","type":"broad"},{"name":"trans,trans-farnesyl diphosphate aristolochene-lyase activity","type":"related"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, aristolochene-forming)","type":"related"}],"termid":"GO:0045483"}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: GO:1904870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:nc","PMID:25467444","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to Cajal body","termid":"GO:1904869"},{"relation_name":"negatively_regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to Cajal body","synonyms":[{"name":"down regulation of protein localisation in Cajal body","type":"exact"},{"name":"down regulation of protein localisation to Cajal body","type":"exact"},{"name":"down regulation of protein localization in Cajal body","type":"exact"},{"name":"down regulation of protein localization to Cajal body","type":"exact"},{"name":"down-regulation of protein localisation in Cajal body","type":"exact"},{"name":"down-regulation of protein localisation to Cajal body","type":"exact"},{"name":"down-regulation of protein localization in Cajal body","type":"exact"},{"name":"down-regulation of protein localization to Cajal body","type":"exact"},{"name":"downregulation of protein localisation in Cajal body","type":"exact"},{"name":"downregulation of protein localisation to Cajal body","type":"exact"},{"name":"downregulation of protein localization in Cajal body","type":"exact"},{"name":"downregulation of protein localization to Cajal body","type":"exact"},{"name":"inhibition of protein localisation in Cajal body","type":"narrow"},{"name":"inhibition of protein localisation to Cajal body","type":"narrow"},{"name":"inhibition of protein localization in Cajal body","type":"narrow"},{"name":"inhibition of protein localization to Cajal body","type":"narrow"},{"name":"negative regulation of protein localisation in Cajal body","type":"exact"},{"name":"negative regulation of protein localisation to Cajal body","type":"exact"},{"name":"negative regulation of protein localization in Cajal body","type":"exact"}],"termid":"GO:1904870"}


id: PBO:0058813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7855","termid":"PBO:0058813"}


id: PBO:0082336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain; required for silencing at the silent mating-type loci and telomeres; similar to E. coli MutL","termid":"PBO:0082336"}


id: GO:0051211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one or more axes, where the growth rate varies according to the direction of growth. Growth may be limited to a particular axis, axes, or to particular locations on the surface of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anisotropic cell growth","synonyms":[{"name":"non-isotropic cell growth","type":"exact"}],"termid":"GO:0051211"}


id: GO:0010491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-L-arabinose 1-phosphate + UTP = UDP-L-arabinose + diphosphate.","definition_xrefs":["PMID:17341835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UTP:arabinose-1-phosphate uridylyltransferase activity","termid":"GO:0010491"}


id: PBO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GDP_binding","termid":"PBO:0030534"}


id: PBO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine ammonia-lyase (predicted)","termid":"PBO:0004729"}


id: PBO:0070587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 53","termid":"PBO:0070587"}


id: GO:0061857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response to endoplasimic reticulum stress in which nascent proteins are degraded by attenuation of their translocation into the ER followed by rerouting to the cytosol without cleavage of the signal peptide, and subsequent degradation by the proteasome.","definition_xrefs":["PMID:17129784","PMID:26565908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum stress-induced pre-emptive quality control","synonyms":[{"name":"ER pQC","type":"exact"},{"name":"ER stress-indiced pre-emptive quality control","type":"exact"}],"termid":"GO:0061857"}


id: PBO:0012268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylate transporter (predicted)","termid":"PBO:0012268"}


id: GO:0003252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000137"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003252"}


id: PBO:0034258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_equivalogy_relationship_with","termid":"PBO:0034258"}


id: GO:1902687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of glucosidase activity.","definition_xrefs":["PMID:23826932","GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucosidase complex","termid":"GO:1902687"}


id: PBO:0077216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog B","termid":"PBO:0077216"}


id: PATO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An attachment quality inhering in a flower by virtue of the bearer's lacking a stalk, as in flowers or leaves that grow directly from the stem.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sessility_(botany)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sessile (sensu botany)","termid":"PATO:0001436"}


id: GO:1903447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of geraniol.","definition_xrefs":["PMID:23200656","GOC:di","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"geraniol catabolic process","synonyms":[{"name":"geraniol breakdown","type":"exact"},{"name":"geraniol catabolism","type":"exact"},{"name":"geraniol degradation","type":"exact"}],"termid":"GO:1903447"}


id: PBO:0090560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ZIP zinc transmembrane transporter Zrt1","termid":"PBO:0090560"}


id: PBO:0088600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transcriptional RNA stability regulator Mkt1","termid":"PBO:0088600"}


id: PBO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 2","termid":"PBO:0001660"}


id: PBO:0069196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 450, pseudogene","termid":"PBO:0069196"}


id: PBO:0049969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 15","termid":"PBO:0049969"}


id: PBO:0058754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6878","termid":"PBO:0058754"}


id: PBO:0058321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4694","termid":"PBO:0058321"}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: GO:0141013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of purine nucleotide from the cytosol, across the lysosomal membrane, into the lysosome.","definition_xrefs":["PMID:23876310","PMID:18375752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"purine nucleotide import into lysosome","termid":"GO:0141013"}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: MOD:00969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAM-Cys vs PAM-Cys","termid":"MOD:00969"}


id: PBO:0078104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 12","termid":"PBO:0078104"}


id: PBO:0088384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase","termid":"PBO:0088384"}


id: GO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a potassium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of potassium channel activity in another organism","synonyms":[{"name":"modulation of potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044363"}


id: PBO:0088564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0088564"}


id: PBO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"new gene","termid":"PBO:0000082"}


id: PBO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 16","termid":"PBO:0045568"}


id: PBO:0076319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin 2 like","termid":"PBO:0076319"}


id: PBO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 1","termid":"PBO:0052622"}


id: FYPO:0002802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location at the cell cortex when the cell is subject to nitrogen starvation. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"nucleus mislocalized to cell cortex during nitrogen starvation","synonyms":[{"name":"nuclear displacement to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus displaced to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalised to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen depletion","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002802"}


id: PBO:0038768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 6","termid":"PBO:0038768"}


id: PBO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin induced gene 2","termid":"PBO:0051715"}


id: GO:1901777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mitomycin C.","definition_xrefs":["GOC:TermGenie","PMID:10094699","UniPathway:UPA00851","PMID:10099135","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mitomycin C biosynthetic process","synonyms":[{"name":"mitomycin C anabolism","type":"exact"},{"name":"mitomycin C biosynthesis","type":"exact"},{"name":"mitomycin C formation","type":"exact"},{"name":"mitomycin C synthesis","type":"exact"}],"termid":"GO:1901777"}


id: PR:000045542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Thr-14 and Tyr-15 within the ATP binding region. UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:26131711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos:(T14,Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 3","type":"related"},{"name":"Cdc2-Hf","type":"exact"},{"name":"Spom-cdc2/Phos:3","type":"exact"},{"name":"UniProtKB:P04551, Thr-14/Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos:(T14,Y15,T167)","type":"exact"}],"termid":"PR:000045542"}


id: SO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small nucleolar RNA (snoRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_encoding","synonyms":[{"name":"snoRNA encoding","type":"exact"}],"termid":"SO:0000578"}


id: _global:causally_upstream_of_or_within,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_negative_effect","secondary_identifiers":["RO:0004046"],"termid":"_global:causally_upstream_of_or_within,_negative_effect"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: SO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence, aligned to another sequence with some statistical significance, using an algorithm such as BLAST or SIM4.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match","termid":"SO:0000343"}


id: GO:0098642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer that forms networks.","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"network-forming collagen trimer","termid":"GO:0098642"}


id: PBO:0029321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029321"}


id: PATO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0072961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin II","termid":"PBO:0072961"}


id: PBO:0046254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 3","termid":"PBO:0046254"}


id: PBO:0111911
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0111911"}


id: PR:O14339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1701 gene.","definition_xrefs":["UniProtKB:O14339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.04","synonyms":[{"name":"Spom972h-rpl1701","type":"exact"}],"termid":"PR:O14339"}


id: MOD:00942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (1)H protium atoms with four (2)H deuterium atoms to produce (4,4,5,5-(2)H4)-L-lysine.","definition_xrefs":["Unimod:481","OMSSA:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium tetrasubstituted residue","termid":"MOD:00837"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(4,4,5,5-(2)H4)-L-lysine","synonyms":[{"name":"4,4,5,5-D4 Lysine","type":"related"},{"name":"4,4,5,5-tetradeuterolysine","type":"exact"},{"name":"Label:2H(4)","type":"related"},{"name":"lys-2H4","type":"exact"}],"termid":"MOD:00942"}


id: PBO:0053837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1102","termid":"PBO:0053837"}


id: PBO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.98","termid":"PBO:0005761"}


id: PBO:0073820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 21, pseudogene","termid":"PBO:0073820"}


id: GO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become inner cell mass cells.","definition_xrefs":["ISBN:0124020607","GOC:dph","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell fate commitment","termid":"GO:0001827"}


id: GO:0070842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an aggresome; requires the microtubule cytoskeleton and dynein.","definition_xrefs":["PMID:14675537","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"aggresome assembly","termid":"GO:0070842"}


id: PBO:0031124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_antioxidant","termid":"PBO:0031124"}


id: GO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"negatively_regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte anergy","synonyms":[{"name":"down regulation of lymphocyte anergy","type":"exact"},{"name":"down-regulation of lymphocyte anergy","type":"exact"},{"name":"downregulation of lymphocyte anergy","type":"exact"},{"name":"inhibition of lymphocyte anergy","type":"narrow"}],"termid":"GO:0002912"}


id: PBO:0088247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11","termid":"PBO:0088247"}


id: GO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the plasma membrane are directed to specific destinations in endosome membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, plasma membrane to endosome","synonyms":[{"name":"plasma membrane to endosome targeting","type":"exact"}],"termid":"GO:0048201"}


id: PBO:0084987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh3p; expression regulated by nitrogen and carbon sources; GDH1 has a paralog, GDH3, that arose from the whole genome duplication","termid":"PBO:0084987"}


id: FYPO:0006243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PomBase:mah","PMID:28825727"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006243)","synonyms":[{"name":"abnormal short range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal short range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"abnormal short range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006243"}


id: PATO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000866 suckling reflex value (obsolete PATO:0000866)","termid":"PATO:0000866"}


id: PBO:0051788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCF5 antisense RNA 1","termid":"PBO:0051788"}


id: PBO:0078661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 14-1","termid":"PBO:0078661"}


id: GO:0016429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.","definition_xrefs":["EC:2.1.1.36"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (adenine-N1)-methyltransferase activity (obsolete GO:0016429)","synonyms":[{"name":"1-methyladenine transfer RNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity","type":"related"},{"name":"adenine-1-methylase activity","type":"related"},{"name":"tRNA (adenine-N1-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA (adenine-1) methyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenine 1-methyltransferase activity","type":"related"}],"termid":"GO:0016429"}


id: PBO:0049627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 30","termid":"PBO:0049627"}


id: GO:0010248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ions to establish or maintain an electrochemical gradient across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of transmembrane electrochemical gradient","termid":"GO:0010248"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: GO:0016305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol and phosphatidylinositol-4-phosphate; the human form can phosphorylate phosphatidylinositol-4,5-bisphosphate in the presence of phosphatidylserine.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class II (obsolete GO:0016305)","synonyms":[{"name":"PI3KC2","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"exact"}],"termid":"GO:0016305"}


id: GO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the paramesonephric duct over time, from its formation to the mature structure. Mullerian ducts (or paramesonephric ducts) are paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, cervix, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paramesonephric duct development","synonyms":[{"name":"Mullerian duct development","type":"exact"}],"termid":"GO:0061205"}


id: GO:0009444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the conversion of pyruvate to acetylphosphate.","definition_xrefs":["MetaCyc:PYRUVOX-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate oxidation (obsolete GO:0009444)","secondary_identifiers":["Wikipedia:Pyruvate_decarboxylation"],"termid":"GO:0009444"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PBO:0003205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-like ATPase (predicted)","termid":"PBO:0003205"}


id: PBO:0079789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A10","termid":"PBO:0079789"}


id: PBO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 148","termid":"PBO:0042080"}


id: GO:0140931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) + Cl-(out) = neutral L-amino acid(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:19478081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral amino acid:sodium:chloride symporter activity","type":"exact"}],"termid":"GO:0140931"}


id: PBO:0034412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_maturation_of","termid":"PBO:0034412"}


id: GO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxypteridine + O2 = 2-amino-4,7-dihydroxypteridine + unknown.","definition_xrefs":["MetaCyc:PTERIDINE-OXIDASE-RXN","EC:1.17.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pteridine oxidase activity","secondary_identifiers":["RHEA:12777"],"synonyms":[{"name":"2-amino-4-hydroxypteridine:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050227"}


id: FYPO:0005456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a lower than normal number of cells contain 1C DNA content.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of cells with 1C DNA content","synonyms":[{"name":"decreased amount of cells with 1C DNA content","type":"exact"},{"name":"decreased number of cells containing 1C DNA","type":"exact"},{"name":"reduced number of cells with 1C DNA content","type":"exact"}],"termid":"FYPO:0005456"}


id: GO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NADP+ + AMP + diphosphate + H2O = an aromatic acid + NADPH + ATP.","definition_xrefs":["EC:1.2.1.30","MetaCyc:ARYL-ALDEHYDE-DEHYDROGENASE-NADP+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.2.1.30-RXN","RHEA:19229"],"synonyms":[{"name":"aromatic acid reductase activity","type":"related"},{"name":"aryl-aldehyde:NADP+ oxidoreductase (ATP-forming)","type":"related"}],"termid":"GO:0047683"}


id: GO:0015534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (proline, glycine or betaine)(out) + (H+ or Na+)(out) = (proline, glycine or betaine)(in) + (H+ or Na+)(in).","definition_xrefs":["TC:2.A.1.6.4"],"gene_count":0,"genotype_count":0,"name":"obsolete proline/glycine/betaine:hydrogen/sodium symporter activity (obsolete GO:0015534)","synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"exact"},{"name":"proline/glycine/betaine:proton/sodium symporter","type":"exact"}],"termid":"GO:0015534"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24625659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: GO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the continuous polymerization of actin at one pole of the cell.","definition_xrefs":["GOC:mah","PMID:15773977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell motility","synonyms":[{"name":"cell motility by actin tail formation","type":"exact"}],"termid":"GO:0070358"}


id: PBO:0059963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 8","termid":"PBO:0059963"}


id: GO:0062136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane protein complex capable of low-density lipoprotein particle receptor activity. It may also bind xenobiotic toxins and deliver them into the cell via endocytosis. While most substrates get degraded via the endosome the receptor is recycled to the plasma membrane. It may also act as a transducer of intracellular signal pathways and often acts in corporation with other cell-surface receptors.","definition_xrefs":["PMID:26005850","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor complex","termid":"GO:0062137"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"low-density lipoprotein receptor complex","synonyms":[{"name":"LDL receptor complex","type":"exact"},{"name":"LDLR complex","type":"exact"},{"name":"low-density lipoprotein particle receptor complex","type":"exact"}],"termid":"GO:0062136"}


id: PBO:0030150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_diethyl_maleate","termid":"PBO:0030150"}


id: GO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the extracellular matrix to the epithelium of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signalling","type":"exact"}],"termid":"GO:0060668"}


id: GO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the terminal bond of Xaa-Pro-Xaa motifs to release unblocked, N-terminal dipeptides from substrates including Ala-Pro-para-nitroanilide and (sequentially, at the second, fourth and sixth bonds) of the motif Tyr-Pro-Phe-Pro-Gly-Pro-Ile.","definition_xrefs":["EC:3.4.14.11"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidyl-peptidase activity (obsolete GO:0017088)","synonyms":[{"name":"PepX","type":"related"},{"name":"X-Pro dipeptidyl-peptidase activity","type":"exact"},{"name":"X-prolyl dipeptidyl aminopeptidase activity","type":"related"},{"name":"X-prolyl dipeptidyl peptidase activity","type":"related"},{"name":"Xaa-Pro dipeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0017088"}


id: PBO:0042936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 2","termid":"PBO:0042936"}


id: SO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene including C-region (and introns if present) with 5' UTR (SO:0000204) and 3' UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_gene_segment","synonyms":[{"name":"C gene","type":"exact"},{"name":"C_GENE","type":"exact"},{"name":"INSDC_feature:C_region","type":"exact"},{"name":"constant gene","type":"exact"}],"termid":"SO:0000478"}


id: PBO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ryh1","termid":"PBO:0000829"}


id: MOD:01773
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a trimethyllysine residue with secondary loss of a neutral trimethylamine molecular fragment.","definition_xrefs":["PubMed:17205979","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine with neutral loss of trimethylamine","synonyms":[{"name":"dMe3N6Me3+Lys","type":"exact"}],"termid":"MOD:01773"}


id: GO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mesonephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in mesonephros development","synonyms":[{"name":"cell-cell signalling involved in mesonephros development","type":"exact"}],"termid":"GO:0061210"}


id: GO:0102661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-nonaprenyl diphosphate + homogentisate + H+ = 2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinone + carbon dioxide + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:2.5.1.117"],"gene_count":0,"genotype_count":0,"name":"obsolete homogentisate solanyltransferase activity (obsolete GO:0102661)","termid":"GO:0102661"}


id: PBO:0029783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_morphology_(obsolete_FYPO:0002454)","termid":"PBO:0029783"}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: PBO:0056718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha","termid":"PBO:0056718"}


id: PBO:0049311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 1","termid":"PBO:0049311"}


id: GO:0061681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde-3-phosphate.","definition_xrefs":["PMID:12921536","GOC:dph","MetaCyc:ENTNER-DOUFDOROFF-PWY-III"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde-3-phosphate","secondary_identifiers":["MetaCyc:PWY-2221"],"termid":"GO:0061681"}


id: GO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules.","definition_xrefs":["GOC:nhn","CL:0000182","PMID:19878874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte homeostasis","termid":"GO:0036333"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: PBO:0078718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 3-1","termid":"PBO:0078718"}


id: MOD:01801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an L-serinium (protonated L-serine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"}


id: GO:0019801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of asparagine to yield an L-aspartimide (otherwise known as alpha-aminosuccinimide) residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["RESID:AA0302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0044281","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"cyclization of asparagine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of asparagine, during protein splicing","type":"related"}],"termid":"GO:0019801"}


id: PR:G2TRK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC343.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C343.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.21","synonyms":[{"name":"Spom972h-SPAC343.21","type":"exact"}],"termid":"PR:G2TRK0"}


id: PBO:0063815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHLDA1 antisense RNA 1","termid":"PBO:0063815"}


id: PBO:0062305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 2","termid":"PBO:0062305"}


id: PBO:0085564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; null mutant is sensitive to expression of the top1-T722A allele; mutation confers sensitivity to copper","termid":"PBO:0085564"}


id: GO:1990254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a keratin filament, an intermediate filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells.","definition_xrefs":["PMID:6170061","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament binding","termid":"GO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"keratin filament binding","termid":"GO:1990254"}


id: GO:1903248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of citrulline biosynthetic process.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:19278978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"citrulline biosynthetic process","termid":"GO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of citrulline biosynthetic process","synonyms":[{"name":"regulation of citrulline synthesis","type":"exact"},{"name":"regulation of citrulline anabolism","type":"exact"},{"name":"regulation of citrulline biosynthesis","type":"exact"},{"name":"regulation of citrulline formation","type":"exact"}],"termid":"GO:1903248"}


id: PBO:0013449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain and HEAT repeat protein Ppk3","termid":"PBO:0013449"}


id: PBO:0059690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 56","termid":"PBO:0059690"}


id: GO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Wnt-protein, a secreted growth factor involved in signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Wnt-protein binding","termid":"GO:0017147"}


id: PATO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple and brown hue.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Maroon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maroon","termid":"PATO:0001426"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: PBO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 1","termid":"PBO:0060479"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: GO:0140858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-15 residue.","definition_xrefs":["PMID:22980979","PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0004842","GO:0016740","GO:0019787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H2AK15 ubiquitin ligase activity","synonyms":[{"name":"histone ubiquitin ligase activity (H2A-K15 specific)","type":"exact"}],"termid":"GO:0140858"}


id: PBO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 5","termid":"PBO:0043523"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: GO:0043908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Ala) and Gly-tRNA(Ala).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0140101","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"Ser(Gly)-tRNA(Ala) hydrolase activity","synonyms":[{"name":"Ser(Gly)-tRNAAla hydrolase activity","type":"exact"}],"termid":"GO:0043908"}


id: GO:1902974
data:
  {"annotated_genes":["SJAG_03438","SJAG_03048","SJAG_00364","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112331,102729,85237,98496],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation involved in meiotic cell cycle DNA replication.","definition_xrefs":["PMID:10888871","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cell cycle DNA replication initiation","termid":"GO:1902315"},{"relation_name":"part_of","term_name":"meiotic cell cycle","termid":"GO:0051321"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072691"],"synonyms":[{"name":"DNA replication initiation involved in meiotic DNA replication","type":"exact"},{"name":"DNA replication initiation involved in meiotic cell cycle DNA replication","type":"exact"},{"name":"initiation of meiotic DNA synthesis","type":"related"},{"name":"initiation of premeiotic DNA replication","type":"related"},{"name":"initiation of premeiotic DNA synthesis","type":"related"},{"name":"premeiotic DNA replication initiation","type":"related"}],"termid":"GO:1902974","terms_by_termid":{"GO:1904514":null}}


id: PBO:0050539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1","termid":"PBO:0050539"}


id: GO:1905023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:8049265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of aminoacyl-tRNA ligase activity","termid":"GO:1903630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of threonine-tRNA ligase activity","synonyms":[{"name":"activation of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"activation of TRS","type":"related"},{"name":"activation of threonine translase activity","type":"narrow"},{"name":"activation of threonine-tRNA ligase activity","type":"narrow"},{"name":"activation of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"activation of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of TRS","type":"related"},{"name":"positive regulation of threonine translase activity","type":"exact"},{"name":"positive regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up regulation of TRS","type":"related"},{"name":"up regulation of threonine translase activity","type":"exact"},{"name":"up regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of TRS","type":"related"},{"name":"up-regulation of threonine translase activity","type":"exact"},{"name":"up-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"upregulation of TRS","type":"related"},{"name":"upregulation of threonine translase activity","type":"exact"},{"name":"upregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"upregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"upregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905023"}


id: GO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-serine to form peptidyl-O-acetyl-L-serine.","definition_xrefs":["PMID:489587","PMID:7309355","RESID:AA0364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"peptidyl-serine acetylation","termid":"GO:0030920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine O-acetylation","termid":"GO:0030919"}


id: PR:O14261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taz1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.04","synonyms":[{"name":"Spom972h-atg11","type":"exact"},{"name":"autophagy-related protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasm to vacuole targeting protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein taf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14261"}


id: PBO:0062586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 1","termid":"PBO:0062586"}


id: PBO:0031585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_G418","termid":"PBO:0031585"}


id: PR:Q9P375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized rhomboid protein C19B12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.06c","synonyms":[{"name":"Spom972h-SPAC19B12.06c","type":"exact"}],"termid":"PR:Q9P375"}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: FYPO:0005092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, and volume than normal, is shaped in the form of a pear, and undergoes two or more rounds of cell division and then dies. In a pear-shaped cell, one end is rounded, while the other resembles an end of a normal rod-shaped cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen pear-shaped vegetative cell","termid":"FYPO:0004965"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, swollen, elongated cell","termid":"FYPO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"}],"termid":"FYPO:0005092"}


id: PR:O59776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1795.12c gene.","definition_xrefs":["UniProtKB:O59776","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1795.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.12c","synonyms":[{"name":"Spom972h-SPCC1795.12c","type":"exact"}],"termid":"PR:O59776"}


id: GO:0048408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epidermal growth factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"epidermal growth factor binding","synonyms":[{"name":"EGF binding","type":"exact"}],"termid":"GO:0048408"}


id: PBO:0067865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 167","termid":"PBO:0067865"}


id: GO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Germline specific intercellular bridge. During cyst formation in insects, ring canals interconnect the cells of the cyst, facilitating the passage of cytoplasmic components between cells.","definition_xrefs":["PMID:9655801","GOC:mtg_sensu","PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular bridge","termid":"GO:0045171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germline ring canal","termid":"GO:0045172"}


id: PBO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 21","termid":"PBO:0071518"}


id: GO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of basic amino acid residues at the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal basic amino acid aminopeptidase activity (obsolete GO:0051397)","synonyms":[{"name":"N-terminal basic amino acid aminopeptidase activity","type":"exact"}],"termid":"GO:0051397"}


id: PBO:0042881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 221","termid":"PBO:0042881"}


id: PBO:0089901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome C oxidase assembly protein Mss51","termid":"PBO:0089901"}


id: GO:0003004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the antral spaces stage of oogenesis.","definition_xrefs":["GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"distinct antral spaces stage","termid":"GO:0048164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in distinct antral spaces stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during distinct antral spaces stage","type":"related"}],"termid":"GO:0003004"}


id: GO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An specialized occluding junction where three epithelial cells meet. It is composed of a branching network of sealing strands that run perpendicularly to the bicellular tight junction at the point of contact between three epithelial cells in an epithelial sheet.","definition_xrefs":["PMID:22520461","GOC:dph","GOC:dk","PMID:25822906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tricellular tight junction","termid":"GO:0061689"}


id: PBO:0026959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_localization_during_mitotic_interphase","termid":"PBO:0026959"}


id: PATO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000126 absolute mass (obsolete PATO:0000126)","termid":"PATO:0000126"}


id: GO:1904951
data:
  {"annotated_genes":["SJAG_01805","SJAG_03453","SJAG_04312","SJAG_03048","SJAG_02592","SJAG_01245","SJAG_00906","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[96563,107122,89947,97968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[87007,98506,90505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22761445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of establishment of protein localisation","type":"narrow"},{"name":"activation of establishment of protein localization","type":"narrow"},{"name":"activation of protein positioning","type":"narrow"},{"name":"activation of protein recruitment","type":"narrow"},{"name":"positive regulation of establishment of protein localisation","type":"exact"},{"name":"positive regulation of protein positioning","type":"exact"},{"name":"positive regulation of protein recruitment","type":"exact"},{"name":"up regulation of establishment of protein localisation","type":"exact"},{"name":"up regulation of establishment of protein localization","type":"exact"},{"name":"up regulation of protein positioning","type":"exact"},{"name":"up regulation of protein recruitment","type":"exact"},{"name":"up-regulation of establishment of protein localisation","type":"exact"},{"name":"up-regulation of establishment of protein localization","type":"exact"},{"name":"up-regulation of protein positioning","type":"exact"},{"name":"up-regulation of protein recruitment","type":"exact"},{"name":"upregulation of establishment of protein localisation","type":"exact"},{"name":"upregulation of establishment of protein localization","type":"exact"},{"name":"upregulation of protein positioning","type":"exact"},{"name":"upregulation of protein recruitment","type":"exact"}],"termid":"GO:1904951","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null}}


id: PBO:0062831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transcription factor 1","termid":"PBO:0062831"}


id: PBO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex striatin subunit, Far8/Csc3","termid":"PBO:0012267"}


id: PBO:0041353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4A antisense RNA 1","termid":"PBO:0041353"}


id: GO:0030842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of intermediate filaments by the removal of monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"}


id: PBO:0085701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA polymerase II transcription; also required for histone modifications and splicing; constitutively recruited to the CYC1 promoter and required for recruitment of chromatin remodeling factors for the expression of CYC1 gene; interacts genetically or physically with RNAP II, TBP, TFIIS, and chromatin remodelling factors; central domain is highly conserved throughout eukaryotes; mutations confer an Spt- phenotype","termid":"PBO:0085701"}


id: PBO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb9","termid":"PBO:0001880"}


id: PBO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1A","termid":"PBO:0039573"}


id: PBO:0017762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf1","termid":"PBO:0017762"}


id: GO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypentanoate + acetyl-CoA = 5-hydroxy-pentanoyl-CoA + acetate.","definition_xrefs":["EC:2.8.3.14","RHEA:23496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"5-hydroxypentanoate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R04057","MetaCyc:5-HYDROXYPENTANOATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"5-hydroxyvalerate CoA-transferase activity","type":"related"},{"name":"5-hydroxyvalerate coenzyme A transferase activity","type":"related"},{"name":"acetyl-CoA:5-hydroxypentanoate CoA-transferase activity","type":"related"}],"termid":"GO:0047591"}


id: PBO:0082171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent tRNA methyltransferase; also involved in methoxycarbonylation; required for the synthesis of wybutosine (yW), a modified guanosine found at the 3'-position adjacent to the anticodon of phe-tRNA; similarity to Ppm1p","termid":"PBO:0082171"}


id: FYPO:0006530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abolished during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to centromere during meiotic prophase II","synonyms":[{"name":"abolished protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"abolished protein localisation to centromere during prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during meiotic prophase II","type":"exact"},{"name":"protein localization to centromere abolished during meiotic prophase II","type":"exact"}],"termid":"FYPO:0006530"}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: PBO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light intermediate chain 1","termid":"PBO:0045253"}


id: PBO:0003540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn11 (predicted)","termid":"PBO:0003540"}


id: PBO:0088684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx4","termid":"PBO:0088684"}


id: GO:0120340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 1 (RS1) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:25694453","PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 1","termid":"GO:0120333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke base 1","termid":"GO:0120340"}


id: PBO:0030817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_citrate_(Si)-synthase_activity","termid":"PBO:0030817"}


id: PR:Q9P7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific protein hop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.02","synonyms":[{"name":"Spom972h-hop1","type":"exact"},{"name":"linear element-associated protein hop1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P2"}


id: GO:0097192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:20816705","GOC:mtg_apoptosis","PMID:15044679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"dependence receptor signaling pathway","type":"related"},{"name":"extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:0097192"}


id: PBO:0053703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 905","termid":"PBO:0053703"}


id: PBO:0017978
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoFructoKinase","termid":"PBO:0017978"}


id: GO:0102317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(methylamino)butyric acid + O2 + H2O = gamma-aminobutyric acid + formaldehyde + hydrogen peroxide.","definition_xrefs":["EC:1.5.3.19","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-methylaminobutyrate oxidase (demethylating) activity","secondary_identifiers":["MetaCyc:RXN-13067","RHEA:33907"],"termid":"GO:0102317"}


id: PBO:0067537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 681, pseudogene","termid":"PBO:0067537"}


id: PBO:0046447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin receptor","termid":"PBO:0046447"}


id: PBO:0111802
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0111802"}


id: PBO:0046239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 33","termid":"PBO:0046239"}


id: PBO:0072434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 8","termid":"PBO:0072434"}


id: GO:1990423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinetochore component required for both meiotic and mitotic spindle assembly checkpoints.","definition_xrefs":["PMID:12686595","PMID:20462495","PMID:15922598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991","GO:0000776"],"is_obsolete":false,"name":"RZZ complex","synonyms":[{"name":"Rod-Zwilch-Zw10 complex","type":"exact"}],"termid":"GO:1990423"}


id: GO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","termid":"GO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"}


id: PBO:0041692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor like receptor","termid":"PBO:0041692"}


id: PBO:0036352
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine INhibited","termid":"PBO:0036352"}


id: GO:0022018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}


id: PBO:0085410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane regulator of polyamine and carnitine transport; has similarity to transporters but lacks transport activity; may act as a sensor that transduces environmental signals; has a positive or negative regulatory effect on transcription of many transporter genes","termid":"PBO:0085410"}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_03633","SJAG_05302","SJAG_01917","SJAG_01405","SJAG_05300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110788],"is_not":false,"summary":null,"term":"GO:0051204"},{"annotations":[95132,110787,84980,97036,109459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null,"GO:0051204":null}}


id: PBO:0078552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 42","termid":"PBO:0078552"}


id: PR:Q6LA54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6LA54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.08c","synonyms":[{"name":"Spom972h-SPAC3H5.08c","type":"exact"}],"termid":"PR:Q6LA54"}


id: GO:0045666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"positively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron differentiation","synonyms":[{"name":"activation of neuron differentiation","type":"narrow"},{"name":"stimulation of neuron differentiation","type":"narrow"},{"name":"up regulation of neuron differentiation","type":"exact"},{"name":"up-regulation of neuron differentiation","type":"exact"},{"name":"upregulation of neuron differentiation","type":"exact"}],"termid":"GO:0045666"}


id: GO:2000343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904209"],"synonyms":[{"name":"positive regulation of CCL2 secretion","type":"exact"},{"name":"positive regulation of CXCL2 production","type":"exact"},{"name":"positive regulation of MIP-2 production","type":"exact"},{"name":"positive regulation of MIP2 production","type":"exact"},{"name":"positive regulation of SCYB2 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000343"}


id: GO:0032765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell cytokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mast cell cytokine production","termid":"GO:0032763"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"mast cell cytokine production","termid":"GO:0032762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell cytokine production","synonyms":[{"name":"activation of mast cell cytokine production","type":"narrow"},{"name":"stimulation of mast cell cytokine production","type":"narrow"},{"name":"up regulation of mast cell cytokine production","type":"exact"},{"name":"up-regulation of mast cell cytokine production","type":"exact"},{"name":"upregulation of mast cell cytokine production","type":"exact"}],"termid":"GO:0032765"}


id: PBO:0049262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin A","termid":"PBO:0049262"}


id: FYPO:0008036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at the CENP-A boundary. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:36200823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy at CENP-A boundary","termid":"FYPO:0008036"}


id: PBO:0052938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-2","termid":"PBO:0052938"}


id: PBO:0074438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 39","termid":"PBO:0074438"}


id: GO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of proteins located within the cell walls of plants, both dicots and grasses, that play an essential role in loosening cell walls during cell growth. They are hydrophobic, non glycosylated proteins of about 30kDa.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete expansin (obsolete GO:0009936)","synonyms":[{"name":"expansin","type":"exact"}],"termid":"GO:0009936"}


id: PBO:0084258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositolphosphotransferase; involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), the most abundant sphingolipid; can mutate to resistance to the antifungals syringomycin E and DmAMP1 and to K. lactis zymocin","termid":"PBO:0084258"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: PBO:0079908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase core protein 2 pseudogene 1","termid":"PBO:0079908"}


id: GO:0000500
data:
  {"annotated_genes":["SJAG_04766","SJAG_02747","SJAG_04083","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89302,91542,101373,112541],"is_not":false,"summary":null,"term":"GO:0000500"}]},"cv_name":"cellular_component","definition":"A complex required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrrn5p, Rrn9p, Rrn10p, histones H3 and H4, and Uaf30p.","definition_xrefs":["PMID:11500378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"RNA polymerase I upstream activating factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I upstream activation factor complex","type":"exact"},{"name":"UAF","type":"exact"}],"termid":"GO:0000500","terms_by_termid":{"GO:0000500":null}}


id: GO:2000001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of DNA damage checkpoint","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000001"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: PBO:0059731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 5","termid":"PBO:0059731"}


id: PBO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035946"}


id: PBO:0027402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0027402"}


id: PBO:0058109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4324","termid":"PBO:0058109"}


id: FYPO:0005698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from the equatorial microtubule organizing center does not occur.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","termid":"FYPO:0004619"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished microtubule nucleation from eMTOC","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation from eMTOC","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing centre","type":"exact"},{"name":"microtubule nucleation from eMTOC abolished","type":"exact"}],"termid":"FYPO:0005698"}


id: GO:1901595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hesperadin","termid":"GO:1901595"}


id: FYPO:0004019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"normal succinate cytochrome c oxidoreductase","type":"related"},{"name":"normal succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"}],"termid":"FYPO:0004019"}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["ISBN:0879694238","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: SO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA between two loop anchor positions that are held in close physical proximity.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"},{"relation_name":"overlaps","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop","synonyms":[{"name":"DNA loop","type":"exact"}],"termid":"SO:0002307"}


id: GO:1903418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane of cell tip.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25157670","PMID:27852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane of cell tip","synonyms":[{"name":"protein localisation in plasma membrane of cell tip","type":"exact"},{"name":"protein localisation to plasma membrane of cell tip","type":"exact"},{"name":"protein localization in plasma membrane of cell tip","type":"exact"}],"termid":"GO:1903418"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["PMID:17765709","PMID:20554881","PMID:24336151","NIF_Subcellular:nlx_subcell_100312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: MOD:00572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15174056","PubMed:15828771","Unimod:343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin hydrazide","synonyms":[{"name":"Argbiotinhydrazide","type":"related"},{"name":"oxidized Arginine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00572"}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: GO:1903679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:11959995","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-independent translational initiation","termid":"GO:1903677"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cap-independent translational initiation","synonyms":[{"name":"activation of cap-independent translational initiation","type":"narrow"},{"name":"up regulation of cap-independent translational initiation","type":"exact"},{"name":"up-regulation of cap-independent translational initiation","type":"exact"},{"name":"upregulation of cap-independent translational initiation","type":"exact"}],"termid":"GO:1903679"}


id: FYPO:0005348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement is abnormal. SPB-led chromosome movement is a microtubule-based process in which chromosomes migrate as a result of rapid spindle pole body (SPB) and centrosome oscillations during mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal maintenance of SPB localization","type":"related"},{"name":"abnormal maintenance of mitotic spindle pole body localization","type":"related"},{"name":"abnormal mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005348"}


id: PBO:0041228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 50","termid":"PBO:0041228"}


id: PBO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 8","termid":"PBO:0061287"}


id: PBO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M transition checkpoint protein Sum2","termid":"PBO:0003113"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: PBO:0074151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1","termid":"PBO:0074151"}


id: PBO:0059419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 5","termid":"PBO:0059419"}


id: MOD:01033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-methoxybenzyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-methoxybenzyl modified residue","synonyms":[{"name":"Mbzl","type":"exact"},{"name":"Mob","type":"exact"}],"termid":"MOD:01033"}


id: GO:0018477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NADP+ + H2O = benzoate + NADPH + H+.","definition_xrefs":["EC:1.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzaldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0019115"},{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:21660","UM-BBD_enzymeID:e0079","MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"NADP-linked benzaldehyde dehydrogenase","type":"related"},{"name":"benzaldehyde:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0018477"}


id: PBO:0080724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 associated protein","termid":"PBO:0080724"}


id: PBO:0108604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_negatively_regulates","termid":"PBO:0108604"}


id: PBO:0074376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 2","termid":"PBO:0074376"}


id: PBO:0058249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4536-2","termid":"PBO:0058249"}


id: PBO:0068009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 311","termid":"PBO:0068009"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: PBO:0043766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX16","termid":"PBO:0043766"}


id: PBO:0081835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 770","termid":"PBO:0081835"}


id: GO:1900072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfite transport.","definition_xrefs":["PMID:10234785","GOC:TermGenie","PMID:10870099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of sulfite transport","termid":"GO:1900071"},{"relation_name":"positively_regulates","term_name":"sulfite transport","termid":"GO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sulfite transport","synonyms":[{"name":"activation of sulfite transport","type":"narrow"},{"name":"activation of sulphite transport","type":"narrow"},{"name":"positive regulation of sulphite transport","type":"exact"},{"name":"up regulation of sulfite transport","type":"related"},{"name":"up regulation of sulphite transport","type":"exact"},{"name":"up-regulation of sulfite transport","type":"related"},{"name":"up-regulation of sulphite transport","type":"exact"},{"name":"upregulation of sulfite transport","type":"related"},{"name":"upregulation of sulphite transport","type":"exact"}],"termid":"GO:1900072"}


id: PBO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit","termid":"PBO:0048297"}


id: PBO:0065749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 1","termid":"PBO:0065749"}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.109","KEGG_REACTION:R07422"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: PBO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 16","termid":"PBO:0050392"}


id: PBO:0039438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and EF-hand domain containing 1","termid":"PBO:0039438"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: PBO:0082065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketosphinganine reductase; catalyzes the second step in phytosphingosine synthesis; essential for growth in the absence of exogenous dihydrosphingosine or phytosphingosine; localized to lipid droplets; member of short chain dehydrogenase/reductase protein family; mutations in human homolog KDSR cause recessive progressive symmetric erythrokeratoderma","termid":"PBO:0082065"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: PBO:0086516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region","termid":"PBO:0086516"}


id: GO:1990906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.","definition_xrefs":["GOC:dph","PMID:25125189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"accessory outer segment","termid":"GO:1990906"}


id: MOD:00277
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 5-methyl-L-arginine.","definition_xrefs":["PubMed:10660523","RESID:AA0272","PubMed:11875433","PubMed:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"C-methylated residue","termid":"MOD:00656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-methyl-L-arginine","synonyms":[{"name":"(2S,5S)-2-amino-5-carbamimidamidohexanoic acid","type":"exact"},{"name":"2-amino-5-guanidinohexanoic acid","type":"exact"},{"name":"4-methylarginine","type":"related"},{"name":"5-methyl-L-arginine","type":"exact"},{"name":"5-methylated L-arginine","type":"exact"},{"name":"C5Me1Arg","type":"exact"},{"name":"MOD_RES 5-methylarginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"delta-methylarginine","type":"exact"}],"termid":"MOD:00277"}


id: PBO:0070000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1296, pseudogene","termid":"PBO:0070000"}


id: PBO:0089189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional proteasome assembly, lid subcomplex subunit Rpn15/Dss1","termid":"PBO:0089189"}


id: PBO:0087535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis; subunits of the phosphopantothenoylcysteine decarboxylase (PPCDC) complex are: Cab3p, Sis2p, Vhs3p, while the subunits of the CoA-synthesizing protein complex (CoA-SPC) are: Cab2p, Cab3p, Cab4p, and Cab5p as well as Sis2p and Vhs3p; null mutant lethality is complemented by E. coli coaBC","termid":"PBO:0087535"}


id: GO:0070089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the chloride concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient.","definition_xrefs":["GOC:kmv","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloride-activated potassium channel activity","termid":"GO:0070089"}


id: GO:0030119
data:
  {"annotated_genes":["SJAG_04931","SJAG_03726","SJAG_04609","SJAG_02805","SJAG_04565","SJAG_00379","SJAG_01167","SJAG_00108","SJAG_00104","SJAG_00800","SJAG_01809","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97246,108886,109104,114925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[107756,104443,107697,92395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[85082,92265,90316,107596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030123"},{"annotations":[107599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030131"}]},"cv_name":"cellular_component","definition":"Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).","definition_xrefs":["PMID:15473838","GOC:mah","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"AP-type membrane coat adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin adaptor","type":"related"}],"termid":"GO:0030119","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030131":null}}


id: GO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.","definition_xrefs":["RESID:AA0128","RESID:AA0129","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deamination","termid":"GO:0018277"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}


id: FYPO:0000597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport","termid":"FYPO:0003578"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuolar transport during vegetative growth","synonyms":[{"name":"abnormal vacuolar protein transport during vegetative growth","type":"narrow"},{"name":"abnormal vacuolar transport during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000597"}


id: GO:0031539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin metabolic process","synonyms":[{"name":"activation of anthocyanin metabolic process","type":"narrow"},{"name":"positive regulation of anthocyanin metabolism","type":"exact"},{"name":"stimulation of anthocyanin metabolic process","type":"narrow"},{"name":"up regulation of anthocyanin metabolic process","type":"exact"},{"name":"up-regulation of anthocyanin metabolic process","type":"exact"},{"name":"upregulation of anthocyanin metabolic process","type":"exact"}],"termid":"GO:0031539"}


id: PBO:0054219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: GO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells acquire the specialized features of B-1b B cells. B-1b B cells are B-1 cells that do not express CD5.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1b B cell differentiation","synonyms":[{"name":"B-1b B cell development","type":"related"},{"name":"B-1b B lymphocyte differentiation","type":"exact"},{"name":"B-1b B-cell differentiation","type":"exact"},{"name":"B-1b B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002338"}


id: PBO:0076754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 4","termid":"PBO:0076754"}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: PATO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape.","definition_xrefs":["PATOC:GVG","Chemistry:http://chemistry.about.com/od/chemistryglossary/a/gasdefinition.htm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a gas","synonyms":[{"name":"gaseous","type":"exact"}],"termid":"PATO:0001547"}


id: GO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast ADPG pyrophosphorylase complex","termid":"GO:0030933"}


id: GO:1904196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of granulosa cell proliferation","termid":"GO:1904195"},{"relation_name":"negatively_regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell proliferation","synonyms":[{"name":"down regulation of granulosa cell proliferation","type":"exact"},{"name":"down-regulation of granulosa cell proliferation","type":"exact"},{"name":"downregulation of granulosa cell proliferation","type":"exact"},{"name":"inhibition of granulosa cell proliferation","type":"narrow"}],"termid":"GO:1904196"}


id: PBO:0088991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12","termid":"PBO:0088991"}


id: PBO:0014576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CLNS1A","termid":"PBO:0014576"}


id: PBO:0108960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0108960"}


id: PBO:0083119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Topoisomerase III; conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially; DNA catenation/decatenation activity is stimulated by RPA and Sgs1p-Top3p-Rmi1p; involved in telomere stability and regulation of mitotic recombination","termid":"PBO:0083119"}


id: GO:0043688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of aspartate charged on a tRNA(Asn) to asparaginyl-tRNA.","definition_xrefs":["GOC:jsg","PMID:9789001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"conversion of aspartyl-tRNA to asparaginyl-tRNA","termid":"GO:0043688"}


id: PBO:0081210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 2","termid":"PBO:0081210"}


id: GO:1990316
data:
  {"annotated_genes":["SJAG_04232","SJAG_01274","SJAG_05017","SJAG_02441","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84026,90940,94004,96088,113868],"is_not":false,"summary":null,"term":"GO:1990316"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Atg1 (or Atg1 homologs e.g. ULK1, ULK2 in mammals) and Atg13 along with other proteins that regulate its function (e.g. Atg17 in yeast or RB1CC1(FIP200) in mammals). This complex has serine/threonine protein kinase activity and is involved in autophagosome formation.","definition_xrefs":["GOC:bhm","GOC:rb","PMID:15743910","PMID:22885598","PMID:19258318","GOC:DOS","PMID:19211835","PMID:19597335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01274":null,"SJAG_02441":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070969","GO:0034273"],"synonyms":[{"name":"ATG1 kinase complex","type":"exact"},{"name":"ATG1-ATG13 complex","type":"exact"},{"name":"ATG1/ULK1 signaling complex","type":"exact"},{"name":"Atg1p signalling complex","type":"exact"},{"name":"ULK complex","type":"exact"},{"name":"ULK1 complex","type":"exact"},{"name":"ULK1 signaling complex","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex","type":"exact"},{"name":"autophagy-initiation complex","type":"exact"}],"termid":"GO:1990316","terms_by_termid":{"GO:1990316":null}}


id: GO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.","definition_xrefs":["RHEA:10716","EC:5.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"inositol-3-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R07324","MetaCyc:MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN","Reactome:R-HSA-1855178"],"synonyms":[{"name":"1L-myo-inositol-1-phosphate lyase (isomerizing)","type":"related"},{"name":"D-glucose 6-phosphate cycloaldolase activity","type":"related"},{"name":"glucocycloaldolase activity","type":"related"},{"name":"glucose 6-phosphate cyclase activity","type":"related"},{"name":"glucose-6-phosphate inositol monophosphate cycloaldolase activity","type":"related"},{"name":"inositol 1-phosphate synthatase activity","type":"related"},{"name":"inositol 1-phosphate synthetase activity","type":"related"}],"termid":"GO:0004512"}


id: PBO:0074269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 11","termid":"PBO:0074269"}


id: PBO:0067363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 462, pseudogene","termid":"PBO:0067363"}


id: PR:O13713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear polyadenylated RNA-binding protein nab2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.06c","synonyms":[{"name":"Spom972h-nab2","type":"exact"}],"termid":"PR:O13713"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: GO:2000741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: GO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A growth factor that binds selectively and non-covalently to glial cell-derived neurotrophic factor receptors.","definition_xrefs":["GOC:vw","PMID:11476867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor binding","synonyms":[{"name":"glial cell line-derived neurotrophic factor receptor binding","type":"related"},{"name":"glial cell line-derived neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0030116"}


id: PBO:0047287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and ankyrin repeat domains 1","termid":"PBO:0047287"}


id: PR:O74809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2D10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.19c","synonyms":[{"name":"Spom972h-alb1","type":"exact"}],"termid":"PR:O74809"}


id: PBO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1B","termid":"PBO:0050778"}


id: GO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"arachidonate transport","termid":"GO:1903963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"arachidonic acid secretion","termid":"GO:0050482"}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: GO:1904327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytosolic proteasome complex.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:17000876","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytosolic proteasome complex","synonyms":[{"name":"protein localisation in cytosolic proteasome complex","type":"exact"},{"name":"protein localisation to cytosolic proteasome complex","type":"exact"},{"name":"protein localization in cytosolic proteasome complex","type":"exact"}],"termid":"GO:1904327"}


id: PBO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, pseudogene","termid":"PBO:0000107"}


id: GO:0016730
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[105805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.18.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on iron-sulphur proteins as donors","type":"exact"}],"termid":"GO:0016730","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: PBO:0067321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 411, pseudogene","termid":"PBO:0067321"}


id: GO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transporter activity (obsolete GO:0015076)","synonyms":[{"name":"heavy metal ion transporter activity","type":"exact"}],"termid":"GO:0015076"}


id: PBO:0111791
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0111791"}


id: PBO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap109","termid":"PBO:0003575"}


id: PBO:0041305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 15","termid":"PBO:0041305"}


id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: GO:1902091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"negatively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumagillin biosynthetic process","synonyms":[{"name":"down regulation of fumagillin anabolism","type":"exact"},{"name":"down regulation of fumagillin biosynthesis","type":"exact"},{"name":"down regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down regulation of fumagillin formation","type":"exact"},{"name":"down regulation of fumagillin synthesis","type":"exact"},{"name":"down-regulation of fumagillin anabolism","type":"exact"},{"name":"down-regulation of fumagillin biosynthesis","type":"exact"},{"name":"down-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down-regulation of fumagillin formation","type":"exact"},{"name":"down-regulation of fumagillin synthesis","type":"exact"},{"name":"downregulation of fumagillin anabolism","type":"exact"},{"name":"downregulation of fumagillin biosynthesis","type":"exact"},{"name":"downregulation of fumagillin biosynthetic process","type":"exact"},{"name":"downregulation of fumagillin formation","type":"exact"},{"name":"downregulation of fumagillin synthesis","type":"exact"},{"name":"inhibition of fumagillin anabolism","type":"exact"},{"name":"inhibition of fumagillin biosynthesis","type":"exact"},{"name":"inhibition of fumagillin biosynthetic process","type":"narrow"},{"name":"inhibition of fumagillin formation","type":"exact"},{"name":"inhibition of fumagillin synthesis","type":"exact"},{"name":"negative regulation of fumagillin anabolism","type":"exact"},{"name":"negative regulation of fumagillin biosynthesis","type":"exact"},{"name":"negative regulation of fumagillin formation","type":"exact"},{"name":"negative regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902091"}


id: SO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACAAT, found in promoters of mating type M-specific genes in fission yeast and bound by the transcription factor Mat1-Mc.","definition_xrefs":["PMID:9233811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_M_box","synonyms":[{"name":"mating type M-box","type":"exact"}],"termid":"SO:0001852"}


id: PBO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome","termid":"PBO:0002221"}


id: FYPO:0007664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"mononucleate monoseptate vegetative cell","type":"exact"},{"name":"mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"monoseptate vegetative cell with mononucleate and anucleate compartments","type":"exact"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"}],"termid":"FYPO:0007664"}


id: PBO:0063210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP3 antisense RNA 1","termid":"PBO:0063210"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: GO:0019500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanide metabolic process","termid":"GO:0019499"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide catabolic process","secondary_identifiers":["MetaCyc:P401-PWY"],"synonyms":[{"name":"cyanide breakdown","type":"exact"},{"name":"cyanide catabolism","type":"exact"},{"name":"cyanide degradation","type":"exact"}],"termid":"GO:0019500"}


id: PATO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000711 absolute time value (obsolete PATO:0000711)","termid":"PATO:0000711"}


id: PBO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 1","termid":"PBO:0050563"}


id: PBO:0003395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop56 (predicted)","termid":"PBO:0003395"}


id: GO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"}


id: MOD:00317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["PubMed:4056688","RESID:AA0312","PubMed:10717661","Unimod:433#K","PubMed:3257009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-3,4-didehydroretinylidene-L-lysine","synonyms":[{"name":"(S)-2-amino-6-[(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexa-1,3-dien-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"},{"name":"3,4-didehydroretinylidene","type":"related"},{"name":"Didehydroretinylidene","type":"related"},{"name":"N6-(3,4-didehydroretinylidene)-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinal-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinyl-lysine","type":"exact"}],"termid":"MOD:00317"}


id: PBO:0046341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 6","termid":"PBO:0046341"}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: GO:0038141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex containing two monomers of the tyrosine kinase receptor ERBB4 (also called HER4).","definition_xrefs":["Reactome:R-HSA-1250221","PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"ERBB4-ERBB4 complex","synonyms":[{"name":"ERBB4 homodimer","type":"exact"}],"termid":"GO:0038141"}


id: PR:O60173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.04","secondary_identifiers":["UniProtKB:O60173"],"synonyms":[{"name":"Spom972h-DDX31","type":"exact"}],"termid":"PR:O60173"}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: GO:0120039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}


id: PBO:0064780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1A pseudogene 1","termid":"PBO:0064780"}


id: PBO:0076060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 2","termid":"PBO:0076060"}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: GO:0006999
data:
  {"annotated_genes":["SJAG_01834","SJAG_03182","SJAG_00840","SJAG_03200","SJAG_02210","SJAG_01833","SJAG_03593"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86301,87859,102260,103887,112557],"is_not":false,"summary":null,"term":"GO:0006999"},{"annotations":[99788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[103883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear pore.","definition_xrefs":["GOC:dph","GOC:jid","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00840":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_02210":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear pore organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pore complex organization and biogenesis","type":"related"},{"name":"nuclear pore organisation","type":"exact"},{"name":"nuclear pore organization and biogenesis","type":"related"}],"termid":"GO:0006999","terms_by_termid":{"GO:0006999":null,"GO:0051292":null,"GO:0140516":null}}


id: PBO:0027827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_G0_phase","termid":"PBO:0027827"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PR:O42653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.14c gene.","definition_xrefs":["UniProtKB:O42653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein C10F6.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.14c","synonyms":[{"name":"Spom972h-SPAC10F6.14c","type":"exact"}],"termid":"PR:O42653"}


id: PBO:0034167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interaction_relation_helper_property","termid":"PBO:0034167"}


id: GO:1903134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose catabolic process that is involved in cellular response to stress.","definition_xrefs":["PMID:15965643","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolic process involved in cellular response to stress (obsolete GO:1903134)","synonyms":[{"name":"mycose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mycose catabolism involved in cellular response to stress","type":"exact"},{"name":"mykose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mykose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose breakdown involved in cellular response to stress","type":"exact"},{"name":"trehalose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose degradation involved in cellular response to stress","type":"exact"}],"termid":"GO:1903134"}


id: PBO:0070862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14","termid":"PBO:0070862"}


id: SO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial LSU rRNA is an RNA component of the large subunit of mitochondrial ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA","termid":"SO:0002128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_LSU_rRNA","synonyms":[{"name":"MT LSU rRNA","type":"exact"},{"name":"mitochondrial LSU rRNA","type":"exact"},{"name":"mitochondrial large subunit rRNA","type":"exact"}],"termid":"SO:0002345"}


id: PBO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2B","termid":"PBO:0044867"}


id: PBO:0058158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4453","termid":"PBO:0058158"}


id: PBO:0092011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA binding endonuclease (intron encoded)","termid":"PBO:0092011"}


id: PBO:0087170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II largest subunit B220; part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime","termid":"PBO:0087170"}


id: PBO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 3","termid":"PBO:0075311"}


id: GO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a receptor signaling pathway via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via STAT","termid":"GO:1904893"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:2000365"],"synonyms":[{"name":"down regulation of JAK-STAT cascade","type":"exact"},{"name":"down-regulation of JAK-STAT cascade","type":"exact"},{"name":"downregulation of JAK-STAT cascade","type":"exact"},{"name":"inhibition of JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT protein import into nucleus","type":"narrow"},{"name":"negative regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046426"}


id: GO:0008806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate.","definition_xrefs":["EC:3.1.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"carboxymethylenebutenolidase activity","secondary_identifiers":["RHEA:12372","UM-BBD_enzymeID:e0066","GO:0018735","MetaCyc:CARBOXYMETHYLENEBUTENOLIDASE-RXN"],"synonyms":[{"name":"4-carboxymethylenebut-2-en-4-olide lactonohydrolase activity","type":"related"},{"name":"carboxymethylene butenolide hydrolase activity","type":"related"},{"name":"dienelactone hydrolase activity","type":"related"},{"name":"maleylacetate enol-lactonase activity","type":"related"}],"termid":"GO:0008806"}


id: PBO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 12","termid":"PBO:0043254"}


id: PBO:0066372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 16","termid":"PBO:0066372"}


id: GO:0046136
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85214,109792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of vitamin metabolic process","type":"narrow"},{"name":"positive regulation of vitamin metabolism","type":"exact"},{"name":"stimulation of vitamin metabolic process","type":"narrow"},{"name":"up regulation of vitamin metabolic process","type":"exact"},{"name":"up-regulation of vitamin metabolic process","type":"exact"},{"name":"upregulation of vitamin metabolic process","type":"exact"}],"termid":"GO:0046136","terms_by_termid":{"GO:0090180":null}}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: PBO:0061662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 2","termid":"PBO:0061662"}


id: PBO:0065871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27B, member RAS oncogene family","termid":"PBO:0065871"}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: PBO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to hexose transporters; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0086079"}


id: GO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes.","definition_xrefs":["GOC:ems","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"polar body extrusion after meiotic divisions","termid":"GO:0040038"}


id: PBO:0064634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase","termid":"PBO:0064634"}


id: GO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-8 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-8 receptor activity","synonyms":[{"name":"IL-8 receptor activity","type":"exact"},{"name":"IL-8R","type":"exact"}],"termid":"GO:0004918"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: PBO:0091348
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DBR1","termid":"PBO:0091348"}


id: GO:0060770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060770"}


id: GO:1901205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901205)","synonyms":[{"name":"down regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"downregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"inhibition of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901205"}


id: PBO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_sequence","termid":"PBO:0034278"}


id: PBO:0077288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM30B pseudogene 1","termid":"PBO:0077288"}


id: GO:0002616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"}


id: PBO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 20, NatB catalytic subunit","termid":"PBO:0060406"}


id: GO:2000427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"positively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of apoptotic cell clearance","synonyms":[{"name":"positive regulation of apoptotic cell removal","type":"exact"},{"name":"positive regulation of efferocytosis","type":"exact"},{"name":"positive regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000427"}


id: PBO:0031109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_microtubule-destabilizing_substance","termid":"PBO:0031109"}


id: PBO:0036261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase subunit Mtr4","termid":"PBO:0036261"}


id: RO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner_in","termid":"RO:0002461"}


id: PBO:0091953
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-Coil protein Quantitatively enriched","termid":"PBO:0091953"}


id: SO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with cobalt ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_cobalt_ion_contact_site","secondary_identifiers":["BS:00136"],"synonyms":[{"name":"Co_contact_site","type":"exact"},{"name":"polypeptide cobalt ion contact site","type":"exact"}],"termid":"SO:0001095"}


id: PBO:0050610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 3","termid":"PBO:0050610"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: SO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002197"}


id: FYPO:0006938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal during cytokinesis.","definition_xrefs":["PMID:30709916","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in increased numbers","termid":"FYPO:0006027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"actin cables present in increased numbers during cytokinesis","synonyms":[{"name":"actin cables present in increased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers during cytokinesis","type":"exact"},{"name":"increased level of actin cables during cytokinesis","type":"related"},{"name":"more actin cables present during cytokinesis","type":"exact"}],"termid":"FYPO:0006938"}


id: GO:0140657
data:
  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id: GO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0006790","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine-containing compound catabolic process","synonyms":[{"name":"thiamin and derivative catabolic process","type":"exact"},{"name":"thiamin and derivative catabolism","type":"exact"},{"name":"thiamin-containing compound catabolic process","type":"exact"},{"name":"thiamine and derivative catabolic process","type":"exact"},{"name":"thiamine and derivative catabolism","type":"exact"},{"name":"thiamine-containing compound breakdown","type":"exact"},{"name":"thiamine-containing compound catabolism","type":"exact"},{"name":"thiamine-containing compound degradation","type":"exact"},{"name":"vitamin B1 and derivative catabolic process","type":"exact"},{"name":"vitamin B1 and derivative catabolism","type":"exact"}],"termid":"GO:0042725"}


id: PBO:0109812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX import factor, TMEM14 family","termid":"PBO:0109812"}


id: PBO:0027646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_BE49385A","termid":"PBO:0027646"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: GO:0044644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, alternative pathway in another organism (obsolete GO:0044644)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044644"}


id: GO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostatic bud formation","termid":"GO:0060686"}


id: PBO:0077480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200C","termid":"PBO:0077480"}


id: PR:Q9C0X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A3.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A3.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.21","synonyms":[{"name":"Spom972h-SPBC29A3.21","type":"exact"}],"termid":"PR:Q9C0X0"}


id: PBO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 104 pseudogene","termid":"PBO:0070186"}


id: GO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase III, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"RNA polymerase III promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001110"}


id: FYECO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was altered in the experiment, compared to expressing the gene from the genome and its endogenous promoter.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000003 expression level (obsolete FYECO:0000003)","termid":"FYECO:0000003"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: PBO:0073098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 2","termid":"PBO:0073098"}


id: PBO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by stress","termid":"PBO:0001412"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: PBO:0072967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 2, pseudogene","termid":"PBO:0072967"}


id: GO:0004435
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89521],"is_not":false,"summary":null,"term":"GO:0004435"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H+.","definition_xrefs":["RHEA:33179","EC:3.1.4.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855221","Reactome:R-HSA-2730847","Reactome:R-HSA-5607735","Reactome:R-HSA-622382","Reactome:R-HSA-9032478","MetaCyc:3.1.4.11-RXN","KEGG_REACTION:R03435","Reactome:R-HSA-9717205","Reactome:R-HSA-202407","Reactome:R-HSA-1855177","Reactome:R-HSA-111879","Reactome:R-HSA-167686","Reactome:R-HSA-1855214"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase activity","type":"exact"},{"name":"PI-PLC activity","type":"related"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"},{"name":"phosphatidylinositol-4,5-bisphosphate hydrolysis","type":"related"},{"name":"phosphoinositidase C activity","type":"related"},{"name":"phosphoinositide phospholipase C activity","type":"related"},{"name":"triphosphoinositide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004435","terms_by_termid":{"GO:0004435":null}}


id: GO:1900343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"down regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"down-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"downregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"inhibition of methane biosynthetic process from dimethyl sulfide","type":"narrow"}],"termid":"GO:1900343"}


id: GO:1904552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","PMID:16382163","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"}


id: PBO:0055311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2739","termid":"PBO:0055311"}


id: GO:0071174
data:
  {"annotated_genes":["SJAG_03353","SJAG_04884","SJAG_03681","SJAG_02451","SJAG_04259","SJAG_00883","SJAG_03126","SJAG_04126","SJAG_02336","SJAG_02169","SJAG_01330","SJAG_04999","SJAG_01082","SJAG_01679","SJAG_01297","SJAG_01837","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111993,104366,109891,100015,103343,110368,108066,95707,86884],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102421,109895,95556,110597,112766,97915,111641,106024,86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[90332],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112770],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90333],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that originates from the spindle and delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and oriented, the completion of anaphase until chromosomes are attached to the spindle, or mitotic exit and cytokinesis when the spindle does not form.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072477"],"synonyms":[{"name":"mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"mitotic spindle checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic spindle checkpoint","type":"exact"},{"name":"topo II checkpoint","type":"related"},{"name":"topoisomerase II checkpoint","type":"related"}],"termid":"GO:0071174","terms_by_termid":{"GO:0007094":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:1902031
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[75051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NADP metabolic process.","definition_xrefs":["PMID:23334421","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NADP metabolic process","termid":"GO:0006739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"related"},{"name":"regulation of NADP (oxidized) metabolic process","type":"exact"},{"name":"regulation of NADP (oxidized) metabolism","type":"exact"},{"name":"regulation of NADP (reduced) metabolic process","type":"exact"},{"name":"regulation of NADP (reduced) metabolism","type":"exact"},{"name":"regulation of NADP metabolism","type":"exact"},{"name":"regulation of NADPH metabolic process","type":"exact"},{"name":"regulation of NADPH metabolism","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of oxidized NADP metabolic process","type":"exact"},{"name":"regulation of oxidized NADP metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of reduced NADP metabolic process","type":"exact"},{"name":"regulation of reduced NADP metabolism","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:1902031","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: PBO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q32.1)","termid":"PBO:0047868"}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14077","RHEA:57596"],"termid":"GO:0102472"}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:krc","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: PBO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase (predicted)","termid":"PBO:0002560"}


id: PBO:0076967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like X-linked","termid":"PBO:0076967"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: GO:0046125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside metabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0046125"}


id: PBO:0082947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic light chain dynein, microtubule motor protein; required for intracellular transport and cell division; involved in mitotic spindle positioning; forms complex with dynein intermediate chain Pac11p that promotes Dyn1p homodimerization, potentiates motor processivity; Dyn2p-Pac11p complex important for interaction of dynein motor complex with dynactin complex; acts as molecular glue to dimerize, stabilize Nup82-Nsp1-Nup159 complex module of cytoplasmic pore filaments","termid":"PBO:0082947"}


id: GO:2000088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric glomerulus development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerulus development","termid":"GO:0090194"},{"relation_name":"is_a","term_name":"regulation of mesonephric glomerulus development","termid":"GO:2000087"},{"relation_name":"negatively_regulates","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric glomerulus development","termid":"GO:2000088"}


id: PBO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034632"}


id: FYPO:0002733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated tapered cell","type":"exact"}],"termid":"FYPO:0002733"}


id: GO:1903660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["PMID:24280217","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"is_a","term_name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"},{"relation_name":"negatively_regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement-dependent cytotoxicity","synonyms":[{"name":"down regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"down-regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"downregulation of complement-dependent cytotoxicity","type":"exact"},{"name":"inhibition of complement-dependent cytotoxicity","type":"narrow"}],"termid":"GO:1903660"}


id: PATO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's magnitude in respect to a related entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proportionality to","synonyms":[{"name":"proportion","type":"exact"},{"name":"proportionality","type":"exact"},{"name":"quotient","type":"exact"},{"name":"rate","type":"related"},{"name":"ratio","type":"exact"}],"termid":"PATO:0001470"}


id: FYPO:0004748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","GO:0005721","PMID:24095277","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"decreased protein exchange at pericentric heterochromatin","termid":"FYPO:0006359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone exchange at pericentric heterochromatin","synonyms":[{"name":"decreased histone exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased histone exchange at dh repeat","type":"narrow"},{"name":"decreased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0004748"}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: PBO:0046824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3","termid":"PBO:0046824"}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: PBO:0082454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression","termid":"PBO:0082454"}


id: GO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the negative regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044637)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044637"}


id: PBO:0060801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 7","termid":"PBO:0060801"}


id: PBO:0091712
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facilitates Rad51 assembly at damage sites independently of Rad57","termid":"PBO:0091712"}


id: PATO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow","termid":"PATO:0001263"}


id: PBO:0079331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17C","termid":"PBO:0079331"}


id: GO:0061629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II-specific DNA-binding transcription factor binding","secondary_identifiers":["GO:0001103","GO:0001102","GO:0001085"],"synonyms":[{"name":"RNA polymerase II activating transcription factor binding","type":"related"},{"name":"RNA polymerase II repressing transcription factor binding","type":"related"},{"name":"RNA polymerase II sequence-specific DNA binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II sequence-specific DNA-binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II transcription factor binding","type":"related"}],"termid":"GO:0061629"}


id: PBO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof7","termid":"PBO:0005843"}


id: PBO:0038550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 5","termid":"PBO:0038550"}


id: MOD:01589
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine.","definition_xrefs":["RESID:AA0499","PubMed:15249686","PubMed:16949362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DADDGlc) serine","type":"exact"},{"name":"DADDGlc","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)]glucosyl-L-serine","type":"exact"},{"name":"O-seryl-beta-2,4-bis(acetylamino)glucoside","type":"exact"},{"name":"O3-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"}],"termid":"MOD:01589"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: PBO:0042175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 5","termid":"PBO:0042175"}


id: PBO:0029834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus","termid":"PBO:0029834"}


id: GO:0042162
data:
  {"annotated_genes":["SJAG_01698","SJAG_01777","SJAG_05979","SJAG_04372","SJAG_04245","SJAG_03092","SJAG_05214","SJAG_03855","SJAG_02362","SJAG_02212","SJAG_01378","SJAG_05372","SJAG_01677","SJAG_00939","SJAG_04863","SJAG_02194","SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85941,93701,95841,101209,104055,107062,107666,110391,111614],"is_not":false,"summary":null,"term":"GO:0042162"},{"annotations":[85355,85939,102247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003691"},{"annotations":[91228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[107639,107664,91229,110704,92204,104237,85357,106485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to a telomere, a specific structure at the end of a linear chromosome required for the integrity and maintenance of the end.","definition_xrefs":["GOC:jl","SO:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01777":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04863":null,"SJAG_05214":null,"SJAG_05372":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomere binding","type":"exact"},{"name":"telomeric repeat binding","type":"exact"}],"termid":"GO:0042162","terms_by_termid":{"GO:0003691":null,"GO:0042162":null,"GO:0043047":null,"GO:0098505":null}}


id: PBO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 21","termid":"PBO:0048070"}


id: SO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The quality of a duplication where the new region exists independently of the original.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duplication_attribute","termid":"SO:0001523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free","termid":"SO:0001516"}


id: GO:0033244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of penicillin metabolic process","synonyms":[{"name":"regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033244"}


id: GO:0014836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a satellite cell becomes restricted such that it will develop into a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"},{"relation_name":"part_of","term_name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}


id: PBO:0084620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p","termid":"PBO:0084620"}


id: PBO:0057287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 507","termid":"PBO:0057287"}


id: GO:0043421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of anthranilate (2-aminobenzoate).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"anthranilate metabolic process","termid":"GO:0043420"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"anthranilate catabolic process","secondary_identifiers":["GO:0019259","MetaCyc:2AMINOBENZDEG-PWY"],"synonyms":[{"name":"anthranilic acid catabolism","type":"narrow"},{"name":"2-aminobenzoate breakdown","type":"exact"},{"name":"2-aminobenzoate catabolic process","type":"exact"},{"name":"2-aminobenzoate catabolism","type":"narrow"},{"name":"2-aminobenzoate degradation","type":"exact"},{"name":"anthranilate breakdown","type":"exact"},{"name":"anthranilate catabolism","type":"exact"},{"name":"anthranilate degradation","type":"exact"},{"name":"anthranilic acid catabolic process","type":"narrow"},{"name":"ortho-aminobenzoic acid catabolic process","type":"narrow"},{"name":"ortho-aminobenzoic acid catabolism","type":"narrow"}],"termid":"GO:0043421"}


id: PBO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 2","termid":"PBO:0043670"}


id: PBO:0057598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 935","termid":"PBO:0057598"}


id: PBO:0109473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_residue","termid":"PBO:0109473"}


id: GO:0016070
data:
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