# terms

id: GO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biomineral tissue development","termid":"GO:0070167"}


id: PBO:0083475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SKP1","termid":"PBO:0083475"}


id: FYPO:0003471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one septum apiece during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multiseptate cell during cellular response to salt stress (obsolete FYPO:0003471)","synonyms":[{"name":"multiseptate cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"multiseptate cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"multiseptate in response to salt stress","type":"exact"}],"termid":"FYPO:0003471"}


id: PBO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 19","termid":"PBO:0071990"}


id: GO:0090578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase V.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase V transcription regulator complex","synonyms":[{"name":"RNA polymerase V transcription factor complex","type":"narrow"}],"termid":"GO:0090578"}


id: FYPO:0002073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during a cellular response to copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleus during cellular response to copper ion","synonyms":[{"name":"ectopic protein localization to nucleus during cellular response to copper","type":"exact"},{"name":"nuclear protein accumulation in response to copper","type":"related"},{"name":"protein mislocalised to nucleus during cellular response to copper ion","type":"exact"},{"name":"protein mislocalised to nucleus during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleus during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002073"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein, UBR ubiquitin-protein ligase E3 Ubr1","termid":"PBO:0018008"}


id: PBO:0028646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_meiotic_prophase_I","termid":"PBO:0028646"}


id: GO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment","synonyms":[{"name":"norepinephrine secreting neuron fate commitment","type":"exact"}],"termid":"GO:0003359"}


id: GO:0071993
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92208,93192,114250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"}]},"cv_name":"biological_process","definition":"The directed movement of a phytochelatin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phytochelatin transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transport","type":"related"}],"termid":"GO:0071993","terms_by_termid":{"GO:0036246":null,"GO:0071995":null}}


id: PBO:0044016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 epsilon","termid":"PBO:0044016"}


id: GO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sequential series of modifications to a set of proteins where the product of one reaction catalyzes the following reaction, ultimately leading to the generation of a mature protein. Modifications typically include proteolysis or covalent modification, and may also include binding events.","definition_xrefs":["GOC:pde","GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein activation cascade","synonyms":[{"name":"protein activation pathway","type":"exact"},{"name":"protein activitory cascade","type":"exact"}],"termid":"GO:0072376"}


id: PBO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VII","termid":"PBO:0046800"}


id: PBO:0089011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Crm1","termid":"PBO:0089011"}


id: PBO:0024865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Mcp2","termid":"PBO:0024865"}


id: GO:0008324
data:
  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id: GO:0007394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in shape of cells at the dorsal-most (leading) edge of the epidermis from being polygonal to being elongated in the dorsal/ventral axis.","definition_xrefs":["PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"regulation of embryonic cell shape","termid":"GO:0016476"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, elongation of leading edge cells","termid":"GO:0007394"}


id: PBO:0088421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9","termid":"PBO:0088421"}


id: GO:1902358
data:
  {"annotated_genes":["SJAG_00671","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61258,63910,64944,64945,106238,112716],"is_not":false,"summary":null,"term":"GO:1902358"},{"annotations":[84605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[96468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:9055073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transport","termid":"GO:0008272"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1902358","terms_by_termid":{"GO:1902358":null,"GO:1902434":null,"GO:1990557":null}}


id: PATO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated brown","synonyms":[{"name":"bright brown","type":"related"}],"termid":"PATO:0001267"}


id: GO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"}


id: PBO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R2","termid":"PBO:0047837"}


id: PBO:0066548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 11","termid":"PBO:0066548"}


id: GO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18-al + NADP+ + 2 H2O. This is a two step reaction. The first step is: abieta-7,13-dien-18-ol + NADPH + H+ + O2 = abieta-7,13-dien-18,18-diol + + NADP+ + H2O. The second step is a spontaneous reaction: abieta-7,13-dien-18,18-diol = abieta-7,13-dien-18-al + H2O.","definition_xrefs":["EC:1.14.14.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"abieta-7,13-dien-18-ol hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06354","RHEA:26221","MetaCyc:RXN-12799"],"termid":"GO:0036204"}


id: PBO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 2","termid":"PBO:0043430"}


id: GO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"basal plasma membrane","termid":"GO:0009925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"basolateral plasma membrane","termid":"GO:0016323"}


id: GO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"mitotic cell cycle phase","termid":"GO:0098763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic M phase","synonyms":[{"name":"M phase of mitotic cell cycle","type":"exact"},{"name":"M-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000087"}


id: PBO:0070496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 31","termid":"PBO:0070496"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115631],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: PBO:0078167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 2","termid":"PBO:0078167"}


id: PR:Q9US59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skb5 gene.","definition_xrefs":["UniProtKB:Q9US59","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.13","synonyms":[{"name":"Spom972h-skb5","type":"exact"}],"termid":"PR:Q9US59"}


id: PBO:0064912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 1","termid":"PBO:0064912"}


id: PBO:0029916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_ergosterol_level","termid":"PBO:0029916"}


id: PBO:0076234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 2","termid":"PBO:0076234"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: MOD:00219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-citrulline.","definition_xrefs":["Unimod:7#R","PubMed:2466844","OMSSA:33","DeltaMass:0","RESID:AA0214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-citrulline","synonyms":[{"name":"(S)-2-amino-5-(carbamoylamino)pentanoic acid","type":"exact"},{"name":"2-amino-5-(aminocarbonyl)aminopentanoic acid","type":"exact"},{"name":"Cit","type":"exact"},{"name":"Citrulline","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-citrulline","type":"exact"},{"name":"MOD_RES Citrulline","type":"exact"},{"name":"N5-(aminocarbonyl)ornithine","type":"exact"},{"name":"N5-carbamoylornithine","type":"exact"},{"name":"N5-carbamylornithine","type":"exact"},{"name":"alpha-amino-delta-ureidovaleric acid","type":"exact"},{"name":"citrullinationr","type":"exact"},{"name":"delta-ureidonorvaline","type":"exact"}],"termid":"MOD:00219"}


id: PR:Q9P7U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEL1-related protein AC977.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.05c","synonyms":[{"name":"Spom972h-SPAC977.05c","type":"exact"}],"termid":"PR:Q9P7U4"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: PBO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 27","termid":"PBO:0071889"}


id: GO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to transforming growth factor beta","synonyms":[{"name":"response to TGF-beta stimulus","type":"exact"},{"name":"response to TGFbeta stimulus","type":"exact"},{"name":"response to transforming growth factor beta stimulus","type":"exact"}],"termid":"GO:0071559"}


id: PBO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 7","termid":"PBO:0075316"}


id: PBO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 13","termid":"PBO:0050235"}


id: GO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0034414)","synonyms":[{"name":"endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0034414"}


id: GO:0044672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional enzyme complex composed of five different polypeptides that catalyzes the decarbonylation of acetyl-CoA, cleaves the C-C and C-S bonds in the acetyl moiety of acetyl-CoA, oxidizes the carbonyl group to CO2 and transfers the methyl group to tetrahydrosarcinapterin. These reactions are important for methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:7693685","PMID:11607176","PMID:8955306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyl-CoA decarbonylase/synthase-carbon monoxide dehydrogenase complex","synonyms":[{"name":"CO dehydrogenase complex","type":"broad"},{"name":"CO dehydrogenase/acetyl-CoA synthase complex","type":"exact"},{"name":"CODH","type":"broad"},{"name":"CODH/ACS complex","type":"exact"},{"name":"carbon monoxide dehydrogenase","type":"broad"},{"name":"carbon-monoxide:(acceptor) oxidoreductase complex","type":"broad"}],"termid":"GO:0044672"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: PBO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus splice sites","termid":"PBO:0003021"}


id: GO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histidine","termid":"GO:0080052"}


id: PBO:0039469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 17","termid":"PBO:0039469"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: PBO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-59","termid":"PBO:0051210"}


id: PBO:0085151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside triphosphate pyrophosphohydrolase; active against various substrates including ITP, dITP and XTP; mediates exclusion of non canonical purines, pyrimidines from dNTP pools; functions with YJL055W to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA without affecting uptake or incorporation of uracil into RNA; protein abundance increases in response to DNA replication stress; yeast HAM1 can complement knockdown of human homolog ITPA","termid":"PBO:0085151"}


id: FYPO:0008159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation at the silent mating-type locus does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PMID:16246721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone phosphorylation during vegetative growth","termid":"FYPO:0002592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008159"}


id: PBO:0049401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1A neighbor","termid":"PBO:0049401"}


id: SO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which Bacteriophage RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_promoter","termid":"SO:0002311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phage_RNA_Polymerase_Promoter","synonyms":[{"name":"Phage RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001204"}


id: GO:0051588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"neurotransmitter transport","termid":"GO:0006836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter transport","termid":"GO:0051588"}


id: GO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly, maturation, and growth of the cell plate to the cell periphery in cells that divide by cell plate formation; often involves deposition of cell wall material in and around the phragmoplast.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytokinesis by cell plate formation","termid":"GO:0000911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cell plate assembly","synonyms":[{"name":"cell plate formation","type":"related"}],"termid":"GO:0000919"}


id: FYPO:0005509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid segregation is abnormal. Meiotic sister chromatid segregation is the process in which sister chromatids are organized and then physically separated and randomly apportioned to two sets during the second division of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic sister chromatid segregation","synonyms":[{"name":"abnormal sister chromatid segregation during meiosis II","type":"exact"},{"name":"chromosome missegregation during meiosis II","type":"related"},{"name":"meiotic chromosome missegregation","type":"related"},{"name":"meiotic sister chromatid missegregation","type":"related"}],"termid":"FYPO:0005509"}


id: PBO:0075970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 10","termid":"PBO:0075970"}


id: PR:O13951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iwr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear localization protein iwr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.08","synonyms":[{"name":"Spom972h-iwr1","type":"exact"}],"termid":"PR:O13951"}


id: PBO:0017430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_substrate","termid":"PBO:0017430"}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: PBO:0089810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type","termid":"PBO:0089810"}


id: MOD:01512
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01512"}


id: GO:0098948
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane (obsolete GO:0098948)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0098948"}


id: GO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"positively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"activation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"upregulation of intermediate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048400"}


id: PBO:0062764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily R member 1","termid":"PBO:0062764"}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: GO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacts selectively with the immunosuppressant FK506, and possesses peptidyl-prolyl isomerase activity (catalysis of the reaction: peptidoproline (omega=180) = peptidylproline (omega=0)).","definition_xrefs":["ISBN:0198506732","EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete FK506-sensitive peptidyl-prolyl cis-trans isomerase (obsolete GO:0030051)","synonyms":[{"name":"FK506 binding protein","type":"related"},{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"exact"},{"name":"FKBP","type":"related"}],"termid":"GO:0030051"}


id: PBO:0029684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron_ion_starvation","termid":"PBO:0029684"}


id: GO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm.","definition_xrefs":["GOC:kmv","GOC:cilia","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary transition zone","synonyms":[{"name":"cilial transition zone","type":"exact"},{"name":"cilium transition zone","type":"exact"},{"name":"connecting cilium","type":"related"}],"termid":"GO:0035869"}


id: PBO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga22","termid":"PBO:0016565"}


id: GO:0070733
data:
  {"annotated_genes":["SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92130],"is_not":false,"summary":null,"term":"GO:0070733"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein = diphosphate + adenylyl-protein; mediates the addition of an adenylyl (adenosine 5'-monophosphate; AMP group) to L-serine, L-threonine, and L-tyrosine residues in target proteins.","definition_xrefs":["PMID:19039103","GOC:mah","PMID:19362538","PMID:33947243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"AMPylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.7.108"],"synonyms":[{"name":"AMPylator","type":"related"},{"name":"adenosine monophosphate-protein transferase activity","type":"exact"},{"name":"protein adenylyltransferase activity","type":"related"}],"termid":"GO:0070733","terms_by_termid":{"GO:0070733":null}}


id: PBO:0085604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in clathrin-mediated endocytosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication","termid":"PBO:0085604"}


id: PBO:0086441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase","termid":"PBO:0086441"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: PBO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exoribonuclease Rex4 (predicted)","termid":"PBO:0004719"}


id: PBO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 2","termid":"PBO:0043744"}


id: PBO:0082930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial glycyl-tRNA synthase; ligates glycine to the cognate anticodon-bearing tRNA; transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation; GRS1 has a paralog, GRS2, that arose from the whole genome duplication; human homolog GARS implicated in Charcot-Marie-Tooth disease, can complement yeast null mutant","termid":"PBO:0082930"}


id: PBO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 1","termid":"PBO:0045433"}


id: PBO:0046182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 3","termid":"PBO:0046182"}


id: PBO:0054580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1982","termid":"PBO:0054580"}


id: GO:0102865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gamma-linolenoyl-[glycerolipid] + 2 ferrocytochrome b5 + O2 + 2 H+ = a (9Z,12Z)-octadeca-9,12-dien-6-ynoyl-[glycerolipid] + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:46536","GOC:pz","PMID:10848999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"delta6-acyl-lipid desaturase activity","secondary_identifiers":["MetaCyc:RXN-8343","EC:1.14.19.38"],"termid":"GO:0102865"}


id: PBO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochindrial dynamin family GTPase Dnm1","termid":"PBO:0017988"}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: GO:0032358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized pyrimidine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"oxidized pyrimidine DNA binding","synonyms":[{"name":"oxidised pyrimidine DNA binding","type":"exact"},{"name":"oxidized pyrimidine base DNA binding","type":"exact"},{"name":"oxidized pyrimidine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032358"}


id: RO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x expressed in y if and only if there is a gene expression process (GO:0010467) that occurs in y, and one of the following holds: (i) x is a gene, and x is transcribed into a transcript as part of the gene expression process (ii) x is a transcript, and the transcription of x is part of the gene expression process (iii) x is a mature gene product such as a protein, and x was translated or otherwise processes from a transcript that was transcribed as part of this gene expression process","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_in","termid":"RO:0002206"}


id: GO:0110090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"positively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hippocampal neuron apoptotic process","termid":"GO:0110090"}


id: GO:1903832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to amino acid starvation.","definition_xrefs":["GO_REF:0000058","PMID:25002487","PMID:7623840","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"}


id: FYECO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerol","synonyms":[{"name":"glycerol added","type":"exact"}],"termid":"FYECO:0000252"}


id: GO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A thiol-dependent isopeptidase activity that cleaves ISG15 from a target protein to which it is conjugated.","definition_xrefs":["GOC:mah","PMID:30213559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"ISG15-specific peptidase activity","secondary_identifiers":["Reactome:R-HSA-9755244","Reactome:R-HSA-1678841","Reactome:R-HSA-9729725","Reactome:R-HSA-5653786"],"synonyms":[{"name":"ISG15-specific protease activity","type":"exact"}],"termid":"GO:0019785"}


id: GO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any interaction between a pathogen and its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host-pathogen interaction (obsolete GO:0030383)","synonyms":[{"name":"host-pathogen interaction","type":"exact"}],"termid":"GO:0030383"}


id: PBO:0034081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-child_nucleus_of_in_hermaphrodite","termid":"PBO:0034081"}


id: FYPO:0002844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells which are septated, elongated, and have a larger than normal cell volume. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen elongated septated cells (obsolete FYPO:0002844)","synonyms":[{"name":"inviable microcolony, enlarged long septated vegetative cells","type":"related"},{"name":"inviable microcolony, large elongated septated vegetative cells","type":"related"},{"name":"inviable microcolony, swollen elongated septated vegetative cells","type":"exact"}],"termid":"FYPO:0002844"}


id: PBO:0053268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A2","termid":"PBO:0053268"}


id: PATO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000254 vibrissae reflex (obsolete PATO:0000254)","termid":"PATO:0000254"}


id: MOD:00526
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:158","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex2HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)dHex(1)","type":"related"},{"name":"Hex2HexNAc2dHex1","type":"related"}],"termid":"MOD:00526"}


id: PR:O13814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.17c","synonyms":[{"name":"Spom972h-mdm10","type":"exact"},{"name":"mitochondrial inheritance component mdm10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13814"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: PBO:0060247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 2","termid":"PBO:0060247"}


id: PBO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.1.1","termid":"PBO:0003609"}


id: GO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-malate + NAD+ = CO2 + NADH + pyruvate.","definition_xrefs":["EC:1.1.1.83","RHEA:18365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-malate dehydrogenase (decarboxylating) activity","secondary_identifiers":["MetaCyc:1.1.1.83-RXN","KEGG_REACTION:R00215"],"synonyms":[{"name":"(R)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"D-malate dehydrogenase activity","type":"related"},{"name":"D-malic enzyme","type":"related"},{"name":"bifunctional L(+)-tartrate dehydrogenase-D(+)-malate (decarboxylating)","type":"related"}],"termid":"GO:0046553"}


id: GO:0042425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism","type":"exact"},{"name":"choline biosynthesis","type":"exact"},{"name":"choline formation","type":"exact"},{"name":"choline synthesis","type":"exact"}],"termid":"GO:0042425"}


id: GO:0042542
data:
  {"annotated_genes":["SJAG_04953","SJAG_02515","SJAG_01199","SJAG_04823","SJAG_00141","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101141,96115,114333,91330,104946,113439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"},{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042542","terms_by_termid":{"GO:0061692":null}}


id: PBO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 2","termid":"PBO:0060497"}


id: PBO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_mitotic_S_phase","termid":"PBO:0034560"}


id: GO:0021822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:cls","GOC:tb","GO_REF:0000021","PMID:12626695","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"down regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"down-regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"downregulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"inhibition of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"narrow"},{"name":"negative regulation of cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"negative regulation of cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021822"}


id: PBO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3","termid":"PBO:0042443"}


id: FYPO:0004492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 5' end of an RNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0000967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal RNA 5'-end processing","synonyms":[{"name":"abnormal RNA 5'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 5'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004492"}


id: PBO:0028119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028119"}


id: PBO:0051230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-28-1 (pseudogene)","termid":"PBO:0051230"}


id: PBO:0089783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs130","termid":"PBO:0089783"}


id: FYPO:0002271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize glutamine, and therefore requires glutamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for glutamine","synonyms":[{"name":"glutamine auxotrophy","type":"exact"},{"name":"growth auxotrophic for glutamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for glutamine during vegetative growth","type":"exact"}],"termid":"FYPO:0002271"}


id: PBO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIM1 family serine/threonine protein kinase Cdr1/Nim1","termid":"PBO:0001672"}


id: PBO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit Sbh1 (predicted)","termid":"PBO:0004508"}


id: GO:0010404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall hydroxyproline-rich glycoprotein that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall proteoglycan metabolic process","termid":"GO:0010384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall hydroxyproline-rich glycoprotein metabolic process","synonyms":[{"name":"cell wall hydroxyproline-rich glycoprotein metabolism","type":"exact"}],"termid":"GO:0010404"}


id: GO:0098035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging","termid":"GO:0019073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}


id: GO:0032736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"positively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-13 production","secondary_identifiers":["GO:0045368","GO:2000667"],"synonyms":[{"name":"activation of interleukin-13 production","type":"narrow"},{"name":"positive regulation of IL-13 production","type":"exact"},{"name":"positive regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-13 secretion","type":"narrow"},{"name":"stimulation of interleukin-13 production","type":"narrow"},{"name":"up regulation of interleukin-13 production","type":"exact"},{"name":"up-regulation of interleukin-13 production","type":"exact"},{"name":"upregulation of interleukin-13 production","type":"exact"}],"termid":"GO:0032736"}


id: PBO:0059944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 30","termid":"PBO:0059944"}


id: PBO:0069134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 384, pseudogene","termid":"PBO:0069134"}


id: PBO:0109351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA sno530","termid":"PBO:0109351"}


id: PBO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap104","termid":"PBO:0090442"}


id: GO:0043055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of a nematode during the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["GOC:cab1","WB_REF:wm2003ab740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dauer","synonyms":[{"name":"maintenance of dormancy in the nematode","type":"exact"}],"termid":"GO:0043055"}


id: PBO:0049895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 5","termid":"PBO:0049895"}


id: PBO:0072276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 5","termid":"PBO:0072276"}


id: FYPO:0005917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin regions is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased subtelomeric heterochromatin RNA level","synonyms":[{"name":"increased transcription at subtelomere","type":"narrow"},{"name":"increased transcription at subtelomeric heterochromatin during vegetative growth","type":"narrow"}],"termid":"FYPO:0005917"}


id: PBO:0046024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit alpha","termid":"PBO:0046024"}


id: GO:0010582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral meristem becomes determinate (i.e. ceases to produce lateral organs and may or may not terminally differentiate).","definition_xrefs":["PMID:18441215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem determinacy","termid":"GO:0010022"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral meristem determinacy","termid":"GO:0010582"}


id: GO:0032811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of epinephrine secretion","synonyms":[{"name":"down regulation of epinephrine secretion","type":"exact"},{"name":"down-regulation of epinephrine secretion","type":"exact"},{"name":"downregulation of epinephrine secretion","type":"exact"},{"name":"inhibition of epinephrine secretion","type":"narrow"},{"name":"negative regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0032811"}


id: GO:0030202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells. They are similar to heparan sulfates but are of somewhat higher average Mr (6000-20000) and contain fewer N-acetyl groups and more N-sulfate and O-sulfate groups; they may be attached in the same manner to protein, forming proteoglycans. They consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparin metabolic process","synonyms":[{"name":"heparan sulfate metabolic process","type":"related"},{"name":"heparin metabolism","type":"exact"}],"termid":"GO:0030202"}


id: PR:O94321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multistep phosphorelay regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.02","synonyms":[{"name":"Spom972h-mpr1","type":"exact"}],"termid":"PR:O94321"}


id: PBO:0038512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 3","termid":"PBO:0038512"}


id: PBO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOCD antisense RNA 1","termid":"PBO:0060357"}


id: PBO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.3.8","termid":"PBO:0005599"}


id: PBO:0008178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Sls1 (predicted)","termid":"PBO:0008178"}


id: PBO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Rik1","termid":"PBO:0000051"}


id: PBO:0062032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 1","termid":"PBO:0062032"}


id: SO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons ATH (ATT, ATC and ATA).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine","synonyms":[{"name":"I","type":"exact"},{"name":"Ile","type":"exact"}],"termid":"SO:0001438"}


id: GO:0140870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of RNA polymerase.","definition_xrefs":["PMID:18313387","PMID:31048766","PMID:15300239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}


id: GO:0019625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into cyanuric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process to cyanuric acid","secondary_identifiers":["MetaCyc:P141-PWY"],"synonyms":[{"name":"atrazine breakdown to cyanuric acid","type":"exact"},{"name":"atrazine degradation to cyanuric acid","type":"exact"}],"termid":"GO:0019625"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:25736288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: GO:0010453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate commitment","termid":"GO:0010453"}


id: PBO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease/exonuclease/phosphatase family domain containing 1","termid":"PBO:0045903"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: FYPO:0006453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a histone acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0000002","FYPO:0000641","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal histone acetyltransferase activity","synonyms":[{"name":"abnormal histone acetylase activity","type":"exact"}],"termid":"FYPO:0006453"}


id: PBO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Res2","termid":"PBO:0000531"}


id: PBO:0086426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexokinase; transcript is upregulated during sporulation and the unfolded protein response; YLR446W is not an essential gene","termid":"PBO:0086426"}


id: GO:2001136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"negatively_regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of endocytic recycling","synonyms":[{"name":"negative regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001136"}


id: PBO:0081821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 738","termid":"PBO:0081821"}


id: GO:0102445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5-trihydroxy-3-methoxyflavon-7-olate + S-adenosyl-L-methionine = 3,3'-dimethylquercetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"3-methylquercetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13930"],"termid":"GO:0102445"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: PBO:0091615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase","termid":"PBO:0091615"}


id: PBO:0062659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 9","termid":"PBO:0062659"}


id: PATO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a continuant.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical object quality","secondary_identifiers":["PATO:0001238","snap:Quality","PATO:0001237"],"synonyms":[{"name":"monadic quality of a continuant","type":"exact"},{"name":"monadic quality of an object","type":"narrow"},{"name":"monadic quality of continuant","type":"narrow"},{"name":"multiply inhering quality of a physical entity ","type":"exact"},{"name":"quality of a continuant","type":"exact"},{"name":"quality of a single physical entity","type":"exact"},{"name":"quality of an object","type":"exact"},{"name":"quality of continuant","type":"exact"}],"termid":"PATO:0001241"}


id: GO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphate(out) = ADP + phosphate + phosphate(in).","definition_xrefs":["EC:7.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled phosphate ion transmembrane transporter activity","secondary_identifiers":["RHEA:24440","MetaCyc:ABC-27-RXN"],"synonyms":[{"name":"ABC phosphate transporter activity","type":"narrow"},{"name":"ATP phosphohydrolase (phosphate-importing)","type":"related"},{"name":"phosphate ABC transporter","type":"narrow"},{"name":"phosphate ion transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphate porter activity","type":"exact"},{"name":"phosphate transporting ATPase activity","type":"exact"},{"name":"phosphate-transporting ATPase activity","type":"related"}],"termid":"GO:0015415"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: PBO:0067651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 826, pseudogene","termid":"PBO:0067651"}


id: PBO:0058686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6814","termid":"PBO:0058686"}


id: GO:0006761
data:
  {"annotated_genes":["SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67467],"is_not":false,"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"dihydrofolate metabolic process","termid":"GO:0046452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0044281"],"is_obsolete":false,"name":"dihydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"7,8-dihydrofolate biosynthesis","type":"exact"},{"name":"7,8-dihydrofolate biosynthetic process","type":"exact"},{"name":"dihydrofolate anabolism","type":"exact"},{"name":"dihydrofolate biosynthesis","type":"exact"},{"name":"dihydrofolate formation","type":"exact"},{"name":"dihydrofolate synthesis","type":"exact"}],"termid":"GO:0006761","terms_by_termid":{"GO:0006761":null}}


id: GO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric distal convoluted tubule cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell development","termid":"GO:0072140"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell development","synonyms":[{"name":"metanephric distal convoluted tubule cell development","type":"exact"}],"termid":"GO:0072241"}


id: GO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + 2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate = CDP-2,3-di-O-geranylgeranyl-sn-glycerol.","definition_xrefs":["GOC:jl","RHEA:25690","PMID:10960477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CTP:2,3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase activity","secondary_identifiers":["EC:2.7.7.67"],"synonyms":[{"name":"CDP-2,3-di-O-geranylgeranyl-sn-glycerol synthase","type":"broad"}],"termid":"GO:0043338"}


id: PBO:0082970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; may interact with ribosomes, based on co-purification experiments; GIP3 has a paralog, HER1, that arose from the whole genome duplication","termid":"PBO:0082970"}


id: PBO:0076380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 1","termid":"PBO:0076380"}


id: GO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 = 2-phenylacetamide + CO2 + H2O.","definition_xrefs":["RHEA:10712","EC:1.13.12.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenylalanine 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENYLALANINE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00690"],"synonyms":[{"name":"L-phenylalanine oxidase (deaminating and decarboxylating)","type":"related"},{"name":"L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"l-phenylalanine oxidase (deaminating and decarboxylating) activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating) oxidase activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating)oxidase activity","type":"related"}],"termid":"GO:0050172"}


id: PBO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 6","termid":"PBO:0043834"}


id: PBO:0072641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphate and 5'-OH ligase","termid":"PBO:0072641"}


id: GO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam + H2O = L-lysine.","definition_xrefs":["RHEA:21388","EC:3.5.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"L-lysine-lactamase activity","secondary_identifiers":["KEGG_REACTION:R00463","MetaCyc:L-LYSINE-LACTAMASE-RXN"],"synonyms":[{"name":"L-alpha-aminocaprolactam hydrolase activity","type":"related"},{"name":"L-lysinamidase activity","type":"related"},{"name":"L-lysine-1,6-lactam lactamhydrolase activity","type":"related"}],"termid":"GO:0050028"}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["GOC:add","PMID:18007680","PMID:18000958","PMID:20065995","PMID:20200518","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: PBO:0081291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 74","termid":"PBO:0081291"}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: GO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heart rate","termid":"GO:0010459"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate involved in baroreceptor response to increased systemic arterial blood pressure","synonyms":[{"name":"down regulation of heart contraction rate in baroreceptor response to increased blood pressure","type":"exact"},{"name":"down-regulation of heart contraction rate in baroreceptor response to increased blood pressure","type":"exact"},{"name":"downregulation of heart contraction rate in baroreceptor response to increased blood pressure","type":"exact"},{"name":"inhibition of heart contraction rate in baroreceptor response to increased blood pressure","type":"narrow"},{"name":"negative control of heart contraction rate in baroreceptor response to increased blood pressure","type":"exact"},{"name":"negative regulation of cardiac contraction rate in baroreceptor response to increased blood pressure","type":"related"},{"name":"negative regulation of heart contraction rate in baroreceptor response to increased blood pressure","type":"exact"}],"termid":"GO:0001985"}


id: PBO:0085165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; required for methionine and cysteine biosynthesis","termid":"PBO:0085165"}


id: GO:0032602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:BHF","PMID:12183377","GOC:rl","Wikipedia:Chemokine","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine production","secondary_identifiers":["GO:0042033","GO:0050755","GO:0090195"],"synonyms":[{"name":"chemokine anabolism","type":"exact"},{"name":"chemokine biosynthesis","type":"exact"},{"name":"chemokine biosynthetic process","type":"narrow"},{"name":"chemokine formation","type":"exact"},{"name":"chemokine metabolic process","type":"narrow"},{"name":"chemokine secretion","type":"narrow"},{"name":"chemokine synthesis","type":"exact"}],"termid":"GO:0032602"}


id: PBO:0087136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p); complex interacts with exosome to mediate 3'-end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; required for termination of non-poly(A) transcripts and efficient splicing; Nrd1-Nab3 pathway appears to have a role in rapid suppression of some genes when cells are shifted to poor growth conditions, indicating role for Nrd1-Nab3 in regulating cellular response to nutrient availability","termid":"PBO:0087136"}


id: PBO:0053650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 702","termid":"PBO:0053650"}


id: PBO:0059256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L22","termid":"PBO:0059256"}


id: PBO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034445"}


id: FYPO:0002842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to centromere outer repeat","synonyms":[{"name":"decreased protein localisation to centromere outer repeat","type":"exact"},{"name":"decreased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to pericentric region","type":"related"},{"name":"decreased protein localization to pericentromeric region","type":"related"},{"name":"reduced protein localization to centromere outer repeat","type":"exact"}],"termid":"FYPO:0002842"}


id: PBO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay","termid":"PBO:0031863"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: GO:2000585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"positive regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000585"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: GO:0102684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2 NADPH + 2 O2 + 2 H+ = (E)-phenylacetaldehyde oxime + 2 NADP + 3 H2O + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.14.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-phenylalanine N-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-4602","RHEA:33263"],"termid":"GO:0102684"}


id: PBO:0045939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A4","termid":"PBO:0045939"}


id: PBO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0001375"}


id: PBO:0066379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIG-I dependent antiviral response regulator RNA","termid":"PBO:0066379"}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: SO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Peroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxywybutosine","secondary_identifiers":["RNAMOD:038"],"synonyms":[{"name":"o2yW","type":"exact"}],"termid":"SO:0001333"}


id: GO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell wall that is no longer able to expand and so does not permit growth. Secondary cell walls contain less pectin that primary cell walls. The secondary cell is mostly composed of cellulose and is strengthened with lignin.","definition_xrefs":["ISBN:0943088399","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"secondary cell wall","secondary_identifiers":["Wikipedia:Secondary_cell_wall"],"termid":"GO:0009531"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: GO:0047908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N5-acyl-L-ornithine ester + H2O = N5-acyl-L-ornithine + an alcohol.","definition_xrefs":["EC:3.1.1.48","MetaCyc:FUSARININE-C-ORNITHINESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"fusarinine-C ornithinesterase activity","secondary_identifiers":["RHEA:20165"],"synonyms":[{"name":"5-N-acyl-L-ornithine-ester hydrolase activity","type":"related"},{"name":"N5-acyl-L-ornithine-ester hydrolase activity","type":"related"},{"name":"ornithine esterase activity","type":"related"}],"termid":"GO:0047908"}


id: GO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress granule assembly","termid":"GO:0062029"}


id: GO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 2-aminomuconate semialdehyde = NADH + 2-amino-muconate.","definition_xrefs":["MetaCyc:1.2.1.32-RXN","EC:1.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aminomuconate-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:14469","UM-BBD_reactionID:r1434","Reactome:R-HSA-71239"],"synonyms":[{"name":"2-aminomuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminomuconate-6-semialdehyde:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"2-hydroxymuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic acid semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-aminomuconic epsilon-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047102"}


id: PBO:0063823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 2","termid":"PBO:0063823"}


id: PR:Q09802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cum1 gene.","definition_xrefs":["UniProtKB:Q09802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C22G7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.11c","synonyms":[{"name":"Spom972h-cum1","type":"exact"}],"termid":"PR:Q09802"}


id: PBO:0044669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylarginine dimethylaminohydrolase 2","termid":"PBO:0044669"}


id: PBO:0054731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2140","termid":"PBO:0054731"}


id: GO:0035996
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin cylindrical membrane-covered projection on the surface of a rhabdomere.","definition_xrefs":["GOC:bf","PMID:14744998","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhabdomere microvillus","termid":"GO:0035996"}


id: GO:0035072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process induced by ecdysone that directly activates salivary gland programmed cell death during salivary gland histolysis.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete ecdysone-mediated induction of salivary gland cell autophagic cell death (obsolete GO:0035072)","termid":"GO:0035072"}


id: GO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterobactin metabolic process","termid":"GO:0009238"},{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"enterobactin catabolic process","synonyms":[{"name":"enterobactin breakdown","type":"exact"},{"name":"enterobactin catabolism","type":"exact"},{"name":"enterobactin degradation","type":"exact"}],"termid":"GO:0046214"}


id: GO:0090025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte chemotaxis","termid":"GO:0090025"}


id: PBO:0082769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; homologous to bacterial Omp85","termid":"PBO:0082769"}


id: PBO:0066152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 5, histone lysine methyltransferase complex subunit","termid":"PBO:0066152"}


id: PBO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 3","termid":"PBO:0060797"}


id: PBO:0025502
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase deficiency","termid":"PBO:0025502"}


id: PBO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin like 1","termid":"PBO:0043382"}


id: GO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist compressive forces; often a proteoglycan.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring compression resistance","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030021"}


id: GO:0102885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-alpha-cuprenene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.95","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-cuprenene synthase activity","secondary_identifiers":["RHEA:32027","MetaCyc:RXN-8426"],"termid":"GO:0102885"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


id: GO:0060643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell of the mammary placode becomes a cell of the mammary gland bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland bud formation","termid":"GO:0060615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: GO:0034701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a tripeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"tripeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.4-RXN"],"termid":"GO:0034701"}


id: GO:1901890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"positively_regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell junction assembly","synonyms":[{"name":"activation of cell junction assembly","type":"narrow"},{"name":"up regulation of cell junction assembly","type":"exact"},{"name":"up-regulation of cell junction assembly","type":"exact"},{"name":"upregulation of cell junction assembly","type":"exact"}],"termid":"GO:1901890"}


id: PBO:0039690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1 like","termid":"PBO:0039690"}


id: PBO:0089430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator","termid":"PBO:0089430"}


id: GO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigmentation","termid":"GO:0048072"}


id: GO:0050621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = alpha,beta-didehydrotryptophan + H2O2 + H+.","definition_xrefs":["EC:1.3.3.10","RHEA:19901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan alpha,beta-oxidase activity","secondary_identifiers":["MetaCyc:1.4.3.17-RXN","KEGG_REACTION:R05317"],"synonyms":[{"name":"L-tryptophan 2',3'-oxidase activity","type":"related"},{"name":"L-tryptophan alpha,beta-dehydrogenase activity","type":"related"},{"name":"L-tryptophan:oxygen alpha,beta-oxidoreductase activity","type":"related"},{"name":"tryptophan a,b-oxidase activity","type":"exact"}],"termid":"GO:0050621"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: PBO:0066286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member K, pseudogene","termid":"PBO:0066286"}


id: PBO:0062673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 2","termid":"PBO:0062673"}


id: PBO:0084150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity methionine permease; integral membrane protein with 13 putative membrane-spanning regions; involved in both methionine and cysteine uptake; subject to transport-activity dependent, methionine-induced endocytosis, vacuolar delivery and degradation; starvation-induced endocytosis is transport-activity independent","termid":"PBO:0084150"}


id: PBO:0067871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 173","termid":"PBO:0067871"}


id: PBO:0039997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 9","termid":"PBO:0039997"}


id: PBO:0109022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 2","termid":"PBO:0109022"}


id: GO:2000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte migration","synonyms":[{"name":"regulation of immature T cell migration","type":"related"},{"name":"regulation of immature T lymphocyte migration","type":"related"},{"name":"regulation of immature T-cell migration","type":"related"},{"name":"regulation of immature T-lymphocyte migration","type":"related"},{"name":"regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000410"}


id: GO:0101029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents or reduces the surface tension of a liquid.","definition_xrefs":["GOC:sl","PMID:20949060"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of liquid surface tension (obsolete GO:0101029)","synonyms":[{"name":"negative regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101029"}


id: PBO:0004618
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SiRNA To Chromatin","termid":"PBO:0004618"}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: PBO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral sphingomyelinase activation associated factor","termid":"PBO:0061528"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: PBO:0087987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability","termid":"PBO:0087987"}


id: PATO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being extended on all sides of another entity simultaneously.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounding","synonyms":[{"name":"encircling","type":"exact"},{"name":"enclosing","type":"exact"}],"termid":"PATO:0001772"}


id: GO:0032137
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102179,112538],"is_not":false,"summary":null,"term":"GO:0032137"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/T mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"guanine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G/T mispair binding","type":"exact"},{"name":"T/G mispair binding","type":"exact"},{"name":"thymine/guanine mispair binding","type":"exact"}],"termid":"GO:0032137","terms_by_termid":{"GO:0032137":null}}


id: GO:2000755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of sphingomyelin catabolic process","termid":"GO:2000754"},{"relation_name":"positively_regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of sphingomyelin catabolic process","synonyms":[{"name":"positive regulation of sphingomyelin breakdown","type":"exact"},{"name":"positive regulation of sphingomyelin catabolism","type":"exact"},{"name":"positive regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000755"}


id: PBO:0043608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper metabolism domain containing 1","termid":"PBO:0043608"}


id: PBO:0027442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0027442"}


id: PBO:0045915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB10 antisense RNA 1","termid":"PBO:0045915"}


id: GO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium sensitivity/resistance (obsolete GO:0019830)","synonyms":[{"name":"cadmium sensitivity/resistance","type":"exact"}],"termid":"GO:0019830"}


id: PR:O14014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga3 gene.","definition_xrefs":["UniProtKB:O14014","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.11","synonyms":[{"name":"Spom972h-rga3","type":"exact"}],"termid":"PR:O14014"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: GO:0008351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule severing activity (obsolete GO:0008351)","synonyms":[{"name":"microtubule severing activity","type":"exact"}],"termid":"GO:0008351"}


id: PBO:0048036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicle stimulating hormone subunit beta","termid":"PBO:0048036"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: GO:1902621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of an actomyosin contractile ring into its constituent components.","definition_xrefs":["PMID:14602073","PMID:22891673"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring disassembly (obsolete GO:1902621)","termid":"GO:1902621"}


id: PBO:0091367
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant","termid":"PBO:0091367"}


id: PBO:0072850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A","termid":"PBO:0072850"}


id: GO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-4,5-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene 4,5-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034808"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PR:Q9HGM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- get1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein get1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.10","synonyms":[{"name":"Spom972h-get1","type":"exact"},{"name":"guided entry of tail-anchored proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGM2"}


id: FYPO:0000483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of mitotic recombination","synonyms":[{"name":"increased rate of mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased rate","type":"related"}],"termid":"FYPO:0000483"}


id: FYPO:0007867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"normal protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle pole","type":"exact"},{"name":"normal protein localization to spindle pole during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007867"}


id: GO:0070775
data:
  {"annotated_genes":["SJAG_01009","SJAG_00545","SJAG_02629","SJAG_01385","SJAG_04815","SJAG_02165","SJAG_00411"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95792,86913,101409,100542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[102615,104035,101410,90092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that catalyzes the acetylation of histone H3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"H3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3 HAT complex","type":"exact"}],"termid":"GO:0070775","terms_by_termid":{"GO:0033100":null,"GO:0036410":null,"GO:1990467":null}}


id: PBO:0082848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding transcription factor; activates transcription of the metallothionein genes CUP1-1 and CUP1-2 in response to elevated copper concentrations; required for regulation of copper genes in response to DNA-damaging reagents; CUP2 has a paralog, HAA1, that arose from the whole genome duplication","termid":"PBO:0082848"}


id: GO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont undergoes a change in shape or form, within the host's cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete morphogenesis of symbiont in host cell (obsolete GO:0044698)","termid":"GO:0044698"}


id: GO:0097549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription by chromatin organization.","definition_xrefs":["PMID:23123093","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin organization involved in negative regulation of transcription (obsolete GO:0097549)","synonyms":[{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"negative regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription by chromatin organization","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"}],"termid":"GO:0097549"}


id: PBO:0064728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 64","termid":"PBO:0064728"}


id: PBO:0077155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLCD4-RWDD3 readthrough","termid":"PBO:0077155"}


id: PBO:0048139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 3","termid":"PBO:0048139"}


id: GO:0051737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 5'-dephospho-DNA = GDP + 5'-phospho-DNA.","definition_xrefs":["PMID:8428918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"GTP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity","synonyms":[{"name":"GTP-dependent DNA 5'-hydroxyl-kinase activity","type":"exact"},{"name":"GTP-dependent DNA kinase activity","type":"exact"},{"name":"GTP-dependent polydeoxyribonucleotide kinase activity","type":"exact"}],"termid":"GO:0051737"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PBO:0044808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 106A","termid":"PBO:0044808"}


id: GO:0051232
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97547],"is_not":false,"summary":null,"term":"GO:0051232"}]},"cv_name":"biological_process","definition":"The lengthening of the distance between poles of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0140013","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle elongation during meiosis","type":"exact"}],"termid":"GO:0051232","terms_by_termid":{"GO:0051232":null}}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["EC:4.4.1.12","MetaCyc:SULFOACETALDEHYDE-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: GO:0007119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unlocalized bud growth such that the entire surface of the bud expands evenly, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell isotropic bud growth","synonyms":[{"name":"isotropic bud growth","type":"broad"}],"termid":"GO:0007119"}


id: PBO:0066444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV1 DNA directed polymerase","termid":"PBO:0066444"}


id: GO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"serotonin binding","synonyms":[{"name":"5-hydroxytryptamine binding","type":"exact"}],"termid":"GO:0051378"}


id: PBO:0045710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 1","termid":"PBO:0045710"}


id: PBO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [acyl-carrier protein] S-malonyltransferase Mct1","termid":"PBO:0090449"}


id: GO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose-1-phosphate + H2O = D-galactose + phosphate.","definition_xrefs":["PMID:9462881","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"D-galactose-1-phosphate phosphatase activity","termid":"GO:0070457"}


id: PR:O14008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cam2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin 1 light chain cam2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.05","synonyms":[{"name":"Spom972h-cam2","type":"exact"},{"name":"calmodulin-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14008"}


id: PBO:0059727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 1","termid":"PBO:0059727"}


id: PBO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 10","termid":"PBO:0042676"}


id: GO:1901141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"lignin biosynthetic process","termid":"GO:0009809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of lignin biosynthetic process","synonyms":[{"name":"regulation of lignin anabolism","type":"exact"},{"name":"regulation of lignin biosynthesis","type":"exact"},{"name":"regulation of lignin formation","type":"exact"},{"name":"regulation of lignin synthesis","type":"exact"}],"termid":"GO:1901141"}


id: PBO:0083044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0083044"}


id: PBO:0059874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 11","termid":"PBO:0059874"}


id: MOD:00264
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["RESID:AA0259","PubMed:3838747","PubMed:3208761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phycoerythrobilin-bis-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-3,18-bis-[(R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"3,18-bis-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-biladiene-ab-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 2 links)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"phycoerythrobilin biscysteine adduct","type":"exact"},{"name":"phycoerythrobilin-bis-L-cysteine","type":"exact"}],"termid":"MOD:00264"}


id: FYPO:0005666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cytoskeleton during meiosis","synonyms":[{"name":"abnormal actin cytoskeleton during meiotic nuclear division","type":"exact"},{"name":"abnormal actin cytoskeleton physical object quality during meiosis","type":"exact"}],"termid":"FYPO:0005666"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["GOC:krc","PMID:29991750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: PBO:0013033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1","termid":"PBO:0013033"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: GO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biochemical reactions and pathways resulting in the formation of a P-cluster of a nitrogenase, a high-nuclearity, Fe/S-only cluster that can be viewed as two [4Fe-4S] sub-clusters sharing a gamma-6-sulfide.","definition_xrefs":["PMID:17563349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"nitrogenase P cluster assembly","synonyms":[{"name":"nitrogenase P cluster biosynthesis","type":"exact"},{"name":"nitrogenase P cluster maturation","type":"exact"}],"termid":"GO:0044573"}


id: PATO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to breaks without significant deformation (strain) when subjected to stress.","definition_xrefs":["wikipedia:http://en.wikipedia.org/wiki/Brittleness"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brittle","termid":"PATO:0002477"}


id: GO:0019281
data:
  {"annotated_genes":["SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99718],"is_not":false,"summary":null,"term":"GO:0019281"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-succinyl-L-homoserine and cystathionine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MET-SAM-PWY"],"synonyms":[{"name":"L-methionine anabolism from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0019281","terms_by_termid":{"GO:0019281":null}}


id: GO:0098767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis II.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis II M phase (obsolete GO:0098767)","termid":"GO:0098767"}


id: PBO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2 (predicted)","termid":"PBO:0001864"}


id: GO:0033677
data:
  {"annotated_genes":["SJAG_02242","SJAG_00857","SJAG_03780","SJAG_04210","SJAG_00884"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103361,111374,102530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[108632,96000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex, i.e. a double helix in which a strand of DNA pairs with a complementary strand of RNA, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_02242":null,"SJAG_03780":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033680"],"synonyms":[{"name":"ATP-dependent DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033677","terms_by_termid":{"GO:0033678":null,"GO:0033679":null}}


id: PR:O60166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nud3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear movement protein nudc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.02","synonyms":[{"name":"Spom972h-nud3","type":"exact"},{"name":"nuclear distribution protein C homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60166"}


id: PBO:0075751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 3","termid":"PBO:0075751"}


id: FYPO:0003307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is higher than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:22684255","PomBase:mah","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased mitotic index","termid":"FYPO:0003307"}


id: PBO:0087616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus; required for replication slow zone (RSZ) breakage following Mec1p inactivation","termid":"PBO:0087616"}


id: PBO:0061451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 2","termid":"PBO:0061451"}


id: GO:0051646
data:
  {"annotated_genes":["SJAG_04003","SJAG_00655","SJAG_02848","SJAG_01741","SJAG_03416","SJAG_00368","SJAG_00079","SJAG_00031","SJAG_02509","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100763,102701],"is_not":false,"summary":null,"term":"GO:0051646"},{"annotations":[87060,102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051654"},{"annotations":[98882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[96073,103537,103324,106984,98883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048312"},{"annotations":[108238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048311"},{"annotations":[86140,98885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"Any process in which a mitochondrion or mitochondria are transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00079":null,"SJAG_00368":null,"SJAG_00655":null,"SJAG_01741":null,"SJAG_02384":null,"SJAG_02509":null,"SJAG_02848":null,"SJAG_03416":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrion localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of mitochondria localization","type":"exact"},{"name":"establishment and maintenance of mitochondrion localization","type":"exact"},{"name":"localization of mitochondria","type":"exact"},{"name":"localization of mitochondrion","type":"exact"},{"name":"mitochondria localization","type":"exact"},{"name":"mitochondrial localization","type":"exact"},{"name":"mitochondrion localisation","type":"exact"}],"termid":"GO:0051646","terms_by_termid":{"GO:0000001":null,"GO:0034643":null,"GO:0048311":null,"GO:0048312":null,"GO:0051646":null,"GO:0051654":null}}


id: PBO:0069800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1086, pseudogene","termid":"PBO:0069800"}


id: FYPO:0000122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere maintenance during vegetative growth","synonyms":[{"name":"abnormal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"telomere maintenance defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000122"}


id: PBO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Kms2","termid":"PBO:0003284"}


id: GO:0097022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:pr","PMID:18379575","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration into lymphoid organs","termid":"GO:0097021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymph node","synonyms":[{"name":"lymphocyte homing","type":"exact"}],"termid":"GO:0097022"}


id: PBO:0078663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 16-1","termid":"PBO:0078663"}


id: GO:1905410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cohesin unloading","termid":"GO:1905343"},{"relation_name":"regulates","term_name":"mitotic cohesin unloading","termid":"GO:0061781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cohesin unloading","termid":"GO:1905410"}


id: GO:0018235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form peptidyl-N6-carboxy-L-lysine.","definition_xrefs":["RESID:AA0114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine carboxylation","termid":"GO:0018235"}


id: GO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"down regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate specification","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048380"}


id: PBO:0056031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin alpha","termid":"PBO:0056031"}


id: PBO:0064355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 2","termid":"PBO:0064355"}


id: PBO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 11","termid":"PBO:0045653"}


id: PBO:0058301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4675","termid":"PBO:0058301"}


id: PR:O13766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc metalloprotease mde10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.04c","synonyms":[{"name":"Spom972h-mde10","type":"exact"},{"name":"meiotically up-regulated gene 139 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation protein mde10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13766"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: PBO:0004250
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate myristic acid preferring","termid":"PBO:0004250"}


id: GO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear outer membrane (obsolete GO:0031309)","synonyms":[{"name":"integral to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031309"}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["UniProtKB:Q9P3T6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: PBO:0085318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; formation of a distinct complex with TORC1, induced by glutamine in dose-dependent manner, results in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1, a lysosomal membrane permeabilization regulator; contains a PtdIns3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0085318"}


id: PBO:0066065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor associated protein of the synapse","termid":"PBO:0066065"}


id: PBO:0065622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 2","termid":"PBO:0065622"}


id: PBO:0055277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2704","termid":"PBO:0055277"}


id: PBO:0058098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4314","termid":"PBO:0058098"}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:2468565","PMID:33963446","PMID:12460531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: PBO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X (predicted)","termid":"PBO:0005798"}


id: PR:000050492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046.","definition_xrefs":["PMID:30853434","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/Phos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046","type":"narrow"},{"name":"mid1/Phos","type":"exact"},{"name":"mid1/Phos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050492"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


id: GO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:mah","GOC:aruk","GOC:bc","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction organization","synonyms":[{"name":"adherens junction organisation","type":"exact"}],"termid":"GO:0034332"}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PR:Q10241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mismatch-binding protein cmb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.11c","synonyms":[{"name":"Spom972h-cmb1","type":"exact"}],"termid":"PR:Q10241"}


id: GO:0102199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dinitrogen oxide + H2O + NAD(P) = 2 nitric oxide + H+ + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.7.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitric oxide reductase (NAD(P)H) activity","secondary_identifiers":["MetaCyc:RXN-12112"],"synonyms":[{"name":"nitric oxide reductase activity (NAD(P)H-dependent) activity","type":"exact"}],"termid":"GO:0102199"}


id: PBO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis eight","termid":"PBO:0002539"}


id: GO:0061532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a primary amine by a cell, in which the primary amine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"primary amine secretion","termid":"GO:0061531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"primary amine secretion, neurotransmission","termid":"GO:0061532"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: PBO:0086109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for beta-1,6 glucan biosynthesis; mutations result in aberrant morphology and severe growth defects","termid":"PBO:0086109"}


id: GO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["GOC:add","PMID:15928680","PMID:10375559","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous antigen","termid":"GO:0019884"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, exogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, exogenous peptide antigen","type":"exact"},{"name":"exogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048007"}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: PBO:0063712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 1","termid":"PBO:0063712"}


id: PBO:0048023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY microtubule binding protein","termid":"PBO:0048023"}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: PR:P22193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02073","PANTHER:PTHR10870:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint control protein rad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.07","secondary_identifiers":["UniProtKB:P22193"],"synonyms":[{"name":"Spom972h-RAD1","type":"exact"}],"termid":"PR:P22193"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: GO:0000824
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94926],"is_not":false,"summary":null,"term":"GO:0000824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol tetrakisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11856","Reactome:R-HSA-1855185"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 3-kinase activity","type":"exact"},{"name":"EC:2.7.1.151","type":"broad"},{"name":"IpmK","type":"broad"},{"name":"inositol 1,4,5,6-tetrakisphosphate 3-kinase activity","type":"exact"},{"name":"inositol polyphosphate multikinase activity","type":"broad"}],"termid":"GO:0000824","terms_by_termid":{"GO:0000824":null}}


id: PBO:0086424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative haloacid dehalogenase-like hydrolase; non-essential gene; overexpression causes a cell cycle delay or arrest; protein abundance increases in response to DNA replication stress","termid":"PBO:0086424"}


id: PATO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000752 mating value (obsolete PATO:0000752)","termid":"PATO:0000752"}


id: GO:0046033
data:
  {"annotated_genes":["SJAG_02850","SJAG_01859","SJAG_02038","SJAG_01070","SJAG_00044","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94265,97930],"is_not":false,"summary":null,"term":"GO:0046033"},{"annotations":[99542,85057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[89674,112930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02850":null,"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"AMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP metabolism","type":"exact"},{"name":"adenylate forming enzyme activity","type":"related"}],"termid":"GO:0046033","terms_by_termid":{"GO:0044208":null,"GO:0044209":null,"GO:0046033":null}}


id: PBO:0088931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0088931"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: PBO:0088747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Gsf1","termid":"PBO:0088747"}


id: GO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to epidermal growth factor","termid":"GO:0070849"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epidermal growth factor stimulus","synonyms":[{"name":"cellular response to EGF stimulus","type":"exact"}],"termid":"GO:0071364"}


id: GO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X3-C chemokine; C-X3-C chemokines have three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-X3-C chemokine binding","termid":"GO:0019960"}


id: PBO:0080710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 10B","termid":"PBO:0080710"}


id: PBO:0084602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR391W was originally annotated as an independent ORF, but was completely contained in larger ORF YLR391W-A in the same frame, and was merged into it on 7-30-1997","termid":"PBO:0084602"}


id: GO:0008454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9696980","RHEA:16057","Reactome:R-HSA-975903","MetaCyc:2.4.1.145-RXN"],"synonyms":[{"name":"GnTIV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"beta-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase IV activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase IV","type":"related"}],"termid":"GO:0008454"}


id: PR:Q9UUA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein tsr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.15","secondary_identifiers":["UniProtKB:Q9UUA9"],"synonyms":[{"name":"SPBC409.15","type":"related"},{"name":"Spom972h-TSR2","type":"exact"}],"termid":"PR:Q9UUA9"}


id: PBO:0031909
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roberts syndrome","termid":"PBO:0031909"}


id: PBO:0062837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 3","termid":"PBO:0062837"}


id: GO:0097247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epigallocatechin 3-gallate, a compound that is a gallic acid ester of a catechin.","definition_xrefs":["GOC:sl","PMID:21307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"epigallocatechin 3-gallate binding","synonyms":[{"name":"EGCG binding","type":"exact"},{"name":"catechin gallate binding","type":"broad"}],"termid":"GO:0097247"}


id: GO:1905771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesodermal cell differentiation.","definition_xrefs":["PMID:23765923","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell differentiation","synonyms":[{"name":"down regulation of mesoderm cell differentiation","type":"exact"},{"name":"down regulation of mesodermal cell differentiation","type":"exact"},{"name":"down-regulation of mesoderm cell differentiation","type":"exact"},{"name":"down-regulation of mesodermal cell differentiation","type":"exact"},{"name":"downregulation of mesoderm cell differentiation","type":"exact"},{"name":"downregulation of mesodermal cell differentiation","type":"exact"},{"name":"inhibition of mesoderm cell differentiation","type":"narrow"},{"name":"inhibition of mesodermal cell differentiation","type":"narrow"},{"name":"negative regulation of mesoderm cell differentiation","type":"exact"}],"termid":"GO:1905771"}


id: PBO:0053099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 5A","termid":"PBO:0053099"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: GO:0072341
data:
  {"annotated_genes":["SJAG_01351","SJAG_04077","SJAG_00869","SJAG_04031","SJAG_02572","SJAG_05181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95397,93157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[84188,98549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001786"},{"annotations":[97324,90242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to a modified amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_01351":null,"SJAG_02572":null,"SJAG_04031":null,"SJAG_04077":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"modified amino acid binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid derivative binding","type":"exact"}],"termid":"GO:0072341","terms_by_termid":{"GO:0001786":null,"GO:0031177":null,"GO:0043295":null}}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: PBO:0014290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRE9 family cell wall 1,6-beta-glucan biosynthesis protein (predicted)","termid":"PBO:0014290"}


id: MOD:00053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N-acetyl-L-glutamic acid.","definition_xrefs":["PubMed:6725286","RESID:AA0044","ChEBI:17533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamic acid","synonyms":[{"name":"(2S)-2-(acetamido)pentanedioic acid","type":"exact"},{"name":"2-(acetylamino)pentanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)pentanedioic acid","type":"exact"},{"name":"AcGlu","type":"exact"},{"name":"MOD_RES N-acetylglutamate","type":"exact"},{"name":"N-acetyl-L-glutamic acid","type":"exact"},{"name":"N-acetylated L-glutamic acid","type":"exact"},{"name":"acetylglutamic acid","type":"exact"}],"termid":"MOD:00053"}


id: PBO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC5 antisense RNA 1","termid":"PBO:0044297"}


id: GO:0043597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The Y-shaped region of a cytoplasmic replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic replication fork","termid":"GO:0043597"}


id: PBO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 1","termid":"PBO:0045925"}


id: GO:0034695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin E","synonyms":[{"name":"response to prostaglandin E stimulus","type":"exact"}],"termid":"GO:0034695"}


id: PBO:0051050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-2","termid":"PBO:0051050"}


id: MOD:02044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-cysteine residue","synonyms":[{"name":"XlnkCys","type":"exact"}],"termid":"MOD:02044"}


id: GO:1904382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein that occurs as part of glycoprotein ER-associated glycoprotein degradation (gpERAD).","definition_xrefs":["GOC:PARL","PMID:24519966","GOC:TermGenie","GO_REF:0000060","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"},{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"},{"relation_name":"part_of","term_name":"ubiquitin-dependent glycoprotein ERAD pathway","termid":"GO:0097466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mannose trimming involved in glycoprotein ERAD pathway","synonyms":[{"name":"glycoprotein mannose trimming involved in ER-associated glycoprotein degradation","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD pathway","type":"related"},{"name":"glycoprotein mannose trimming involved in gpERAD","type":"related"},{"name":"mannose trimming involved in misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"},{"name":"protein alpha-1,2-demannosylation involved in ER-associated glycoprotein degradation","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD pathway","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in gpERAD","type":"exact"}],"termid":"GO:1904382"}


id: PBO:0056968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-2","termid":"PBO:0056968"}


id: GO:0052015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host carbohydrate (obsolete GO:0052015)","synonyms":[{"name":"catabolism by organism of host carbohydrate","type":"exact"}],"termid":"GO:0052015"}


id: PBO:0029411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_cell_cycle_checkpoint_signaling","termid":"PBO:0029411"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["GOC:mtg_sensu","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: GO:0000027
data:
  {"annotated_genes":["SJAG_05679","SJAG_05248","SJAG_02830","SJAG_03773","SJAG_02759","SJAG_04066","SJAG_03458","SJAG_04395","SJAG_03080","SJAG_02952","SJAG_02508","SJAG_04108","SJAG_01339","SJAG_01606","SJAG_00882","SJAG_04992","SJAG_02436","SJAG_02754","SJAG_02840","SJAG_00841","SJAG_01568","SJAG_01454","SJAG_03012","SJAG_03666","SJAG_04669","SJAG_04940","SJAG_03466","SJAG_04492","SJAG_02868","SJAG_02535","SJAG_04847","SJAG_01839","SJAG_04176","SJAG_02427","SJAG_01122","SJAG_04599","SJAG_01161","SJAG_00323","SJAG_01420","SJAG_00949","SJAG_04004","SJAG_03496","SJAG_04304","SJAG_00722","SJAG_01811","SJAG_04180","SJAG_00689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89500,93615,93616,97328,98603,98604,99796,101657,111737,111804,113836,114239],"is_not":false,"summary":null,"term":"GO:0000027"},{"annotations":[103547,99629,111862,109005,88530,112258,95303,96853,89338,102105,111863,105125,94112,96710,96526,106921,108249,85795,107546,88946,112745,114943,98637],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[94113,93205,83848,98021,98022,95581,98638,100173,100251,106851,111444,90967,111445,112668,88239,100909,100400,112669,101316,106850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180023"},{"annotations":[104495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.","definition_xrefs":["GOC:jl","PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00323":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03666":null,"SJAG_03773":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"ribosomal large subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"50S ribosomal subunit assembly","type":"narrow"},{"name":"60S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000027","terms_by_termid":{"GO:0000027":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: PBO:0031172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell","termid":"PBO:0031172"}


id: GO:0034771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of one methyl group to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 monomethylation (obsolete GO:0034771)","synonyms":[{"name":"histone H4 K20 monomethylation","type":"exact"},{"name":"histone lysine H4 K20 monomethylation","type":"exact"}],"termid":"GO:0034771"}


id: GO:0097575
data:
  {"annotated_genes":["SJAG_02392","SJAG_00030","SJAG_04509","SJAG_00596","SJAG_04522","SJAG_03011","SJAG_04947","SJAG_01925","SJAG_00028"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84081,91979,100750,103722,105537,110255,112269],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[96205,100640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["GOC:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00596":null,"SJAG_01925":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lateral cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097575","terms_by_termid":{"GO:0097575":null,"GO:1990463":null}}


id: PATO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000155 relative threshold (obsolete PATO:0000155)","termid":"PATO:0000155"}


id: PBO:0062974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4 like","termid":"PBO:0062974"}


id: PBO:0075554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 2","termid":"PBO:0075554"}


id: PATO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000675 body temperature value (obsolete PATO:0000675)","termid":"PATO:0000675"}


id: PBO:0089860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel Yam8","termid":"PBO:0089860"}


id: PBO:0087767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p; required for the modification of the adenine at position 58 in tRNAs, especially tRNAi-Met; first identified as a negative regulator of GCN4 expression","termid":"PBO:0087767"}


id: FYPO:0003449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G1/S phase transition, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with unreplicated DNA","termid":"FYPO:0001430"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G1/S phase transition","secondary_identifiers":["FYPO:0000395"],"synonyms":[{"name":"abnormal cell cycle arrest at G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest with unreplicated DNA at mitotic G1/S phase transition","type":"exact"},{"name":"abnormal mitotic G1/S phase arrest","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at G1/S phase transition","type":"exact"},{"name":"abolished mitotic G1/S phase transition","type":"related"},{"name":"cell cycle arrest at mitotic G1/S phase transition","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: arrested","type":"related"}],"termid":"FYPO:0003449"}


id: GO:0140839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) (position 3) = RNA polymerase II large subunit trans-proline (omega=0) (position 3).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat P3 isomerase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain P3 isomerase activity","type":"exact"}],"termid":"GO:0140839"}


id: PBO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Cha4 (predicted)","termid":"PBO:0003055"}


id: PBO:0015225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWg2 Partner","termid":"PBO:0015225"}


id: GO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tight junction","secondary_identifiers":["Wikipedia:Tight_junction"],"synonyms":[{"name":"occluding cell junction","type":"exact"},{"name":"occluding junction","type":"exact"}],"termid":"GO:0070160"}


id: GO:1900324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltotriulose transport","termid":"GO:1900324"}


id: GO:0033518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate group from myo-inositol hexakisphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol hexakisphosphate dephosphorylation (obsolete GO:0033518)","synonyms":[{"name":"phytate dephosphorylation","type":"exact"}],"termid":"GO:0033518"}


id: GO:0015974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate catabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolism","type":"exact"},{"name":"guanosine pentaphosphate breakdown","type":"exact"},{"name":"guanosine pentaphosphate catabolism","type":"exact"},{"name":"guanosine pentaphosphate degradation","type":"exact"}],"termid":"GO:0015974"}


id: GO:0090130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a tissue undergo directed movement.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue migration","termid":"GO:0090130"}


id: PBO:0053776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1022","termid":"PBO:0053776"}


id: GO:0045517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-20 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-20 receptor binding","synonyms":[{"name":"IL-20","type":"narrow"},{"name":"interleukin-20 receptor ligand","type":"narrow"}],"termid":"GO:0045517"}


id: GO:0102189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102189)","secondary_identifiers":["MetaCyc:RXN-11957"],"termid":"GO:0102189"}


id: PBO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activator towards Rho/Rac/Cdc42-like small GTPases (predicted)","termid":"PBO:0002796"}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: GO:1904550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arachidonic acid stimulus.","definition_xrefs":["PMID:16382163","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arachidonic acid","termid":"GO:1904550"}


id: GO:1990460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leptin receptor.","definition_xrefs":["GOC:pm","PMID:22405007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"leptin receptor binding","termid":"GO:1990460"}


id: PBO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_phenylalanine","termid":"PBO:0031388"}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: PBO:0050000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator pseudogene 1","termid":"PBO:0050000"}


id: GO:0031945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"positively_regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucocorticoid metabolic process","synonyms":[{"name":"activation of glucocorticoid metabolic process","type":"narrow"},{"name":"positive regulation of glucocorticoid metabolism","type":"exact"},{"name":"stimulation of glucocorticoid metabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid metabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid metabolic process","type":"exact"},{"name":"upregulation of glucocorticoid metabolic process","type":"exact"}],"termid":"GO:0031945"}


id: PBO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4 (predicted)","termid":"PBO:0003327"}


id: GO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alizarin + UDP-D-glucose = 1-hydroxy-2-(beta-D-glucosyloxy)-9,10-anthraquinone + H+ + UDP.","definition_xrefs":["RHEA:20677","EC:2.4.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alizarin 2-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:ALIZARIN-2-BETA-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03573"],"synonyms":[{"name":"UDP-glucose:1,2-dihydroxy-9,10-anthraquinone 2-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-dihydroxy-9,10-anthraquinone 2-O-beta-D-glucosyl-transferase activity","type":"related"},{"name":"alizarin 2-b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-alizarin glucosyltransferase activity","type":"related"}],"termid":"GO:0047644"}


id: PBO:0077986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (TGC) 8-1","termid":"PBO:0077986"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: GO:0140764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translational repressor activity that binds to a single-stranded small regulatory RNA (either a miRNA or a siRNA) to guide it to its target mRNA.","definition_xrefs":["PMID:27184117","PMID:34117606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"small RNA binding translational repressor activity","termid":"GO:0140764"}


id: GO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bicyclic nitroimidazole.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole metabolic process","termid":"GO:0052801"},{"relation_name":"is_a","term_name":"nitroimidazole catabolic process","termid":"GO:0052804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bicyclic nitroimidazole catabolic process","synonyms":[{"name":"bicyclic nitroimidazole breakdown","type":"exact"},{"name":"bicyclic nitroimidazole catabolism","type":"exact"},{"name":"bicyclic nitroimidazole degradation","type":"exact"}],"termid":"GO:0052800"}


id: PBO:0074786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 7","termid":"PBO:0074786"}


id: GO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:bf","PMID:12362232","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of blood coagulation in another organism","synonyms":[{"name":"induction of blood clotting in another organism","type":"exact"},{"name":"positive regulation by organism of blood clotting in other organism","type":"exact"},{"name":"positive regulation by organism of blood coagulation in other organism","type":"exact"},{"name":"positive regulation of blood clotting in other organism","type":"exact"},{"name":"positive regulation of blood coagulation in another organism","type":"related"},{"name":"positive regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035807"}


id: MOD:00175
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-seryl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:8269952","PubMed:12626404","RESID:AA0166","PubMed:2721485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-seryl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSISer","type":"exact"},{"name":"LIPID GPI-like-anchor amidated serine","type":"exact"},{"name":"N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:00175"}


id: PBO:0041674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 2","termid":"PBO:0041674"}


id: GO:0106138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Sec61 translocon complex.","definition_xrefs":["PMID:9792704","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Sec61 translocon complex binding","termid":"GO:0106138"}


id: PBO:0027764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II","termid":"PBO:0027764"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PBO:0087442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0087442"}


id: GO:0008932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues. Acts on linkages within peptidoglycan chains (i.e. not at the ends) to produce shorter strands with 1,6-anhydromuramic acid ends.","definition_xrefs":["PMID:9642199","PMID:10964424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic transglycosylase activity","termid":"GO:0008933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lytic endotransglycosylase activity","secondary_identifiers":["EC:4.2.2.n2"],"synonyms":[{"name":"murein lytic endotransglycosylase E activity","type":"narrow"}],"termid":"GO:0008932"}


id: PBO:0111533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, implicated in rRNA processing","termid":"PBO:0111533"}


id: PR:P15398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.05c","secondary_identifiers":["UniProtKB:P15398"],"synonyms":[{"name":"DNA-directed RNA polymerase I 190 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase I largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1A","type":"exact"}],"termid":"PR:P15398"}


id: PBO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035905"}


id: PBO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homeosis_relationship_with","termid":"PBO:0034356"}


id: PR:O74371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.07c gene.","definition_xrefs":["UniProtKB:O74371","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C32F12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.07c","synonyms":[{"name":"Spom972h-SPBC32F12.07c","type":"exact"}],"termid":"PR:O74371"}


id: PBO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_biogenesis","termid":"PBO:0030326"}


id: GO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of adult somatic muscle development","termid":"GO:0062226"},{"relation_name":"positively_regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult somatic muscle development","termid":"GO:0062227"}


id: GO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a neuronal stem cell.","definition_xrefs":["CL:0000047","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell division","synonyms":[{"name":"NSC division","type":"exact"}],"termid":"GO:0036445"}


id: SO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of match parts.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000038 match_set (obsolete SO:0000038)","termid":"SO:0000038"}


id: GO:1905484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron migration.","definition_xrefs":["GO_REF:0000058","PMID:16516839","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"is_a","term_name":"negative regulation of neuron migration","termid":"GO:2001223"},{"relation_name":"negatively_regulates","term_name":"motor neuron migration","termid":"GO:0097475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron migration","synonyms":[{"name":"down regulation of motor neuron migration","type":"exact"},{"name":"down-regulation of motor neuron migration","type":"exact"},{"name":"downregulation of motor neuron migration","type":"exact"},{"name":"inhibition of motor neuron migration","type":"narrow"}],"termid":"GO:1905484"}


id: PBO:0056608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 1","termid":"PBO:0056608"}


id: GO:0045793
data:
  {"annotated_genes":["SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89941],"is_not":false,"summary":null,"term":"GO:0045793"}]},"cv_name":"biological_process","definition":"Any process that increases cell size.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell size","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell size","type":"narrow"},{"name":"stimulation of cell size","type":"narrow"},{"name":"up regulation of cell size","type":"exact"},{"name":"up-regulation of cell size","type":"exact"},{"name":"upregulation of cell size","type":"exact"}],"termid":"GO:0045793","terms_by_termid":{"GO:0045793":null}}


id: PBO:0079652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V1","termid":"PBO:0079652"}


id: PBO:0052061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 2A","termid":"PBO:0052061"}


id: GO:0009896
data:
  {"annotated_genes":["SJAG_01131","SJAG_00642","SJAG_00766","SJAG_03048","SJAG_01910","SJAG_04546","SJAG_01818","SJAG_00391","SJAG_00343","SJAG_05010","SJAG_04818","SJAG_00071","SJAG_04350","SJAG_00285","SJAG_04084","SJAG_00686","SJAG_00854","SJAG_02213","SJAG_02239","SJAG_05694","SJAG_01521","SJAG_03597","SJAG_03876","SJAG_04006","SJAG_05346","SJAG_00712","SJAG_04153","SJAG_04321","SJAG_01625","SJAG_04496","SJAG_04435","SJAG_00759","SJAG_02723","SJAG_03179","SJAG_02540","SJAG_02765","SJAG_01489","SJAG_03699","SJAG_01944","SJAG_02808","SJAG_01436","SJAG_04427","SJAG_04880","SJAG_02383","SJAG_03113","SJAG_02622","SJAG_04407","SJAG_01544","SJAG_05322","SJAG_02433","SJAG_04825","SJAG_00966","SJAG_05289","SJAG_00169","SJAG_03745","SJAG_01191","SJAG_01184","SJAG_04249","SJAG_03157","SJAG_16457","SJAG_03883","SJAG_03851","SJAG_00824","SJAG_04502","SJAG_01716","SJAG_04682","SJAG_04990","SJAG_04824","SJAG_04477","SJAG_01053","SJAG_01210","SJAG_02036","SJAG_05000","SJAG_02370","SJAG_00704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[102239,108108,87691,106000,109585,106049],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[92052,93386,101360,89205,98199,88388,103567,111531,111978,100513,102568,114345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[94277,96040,111238,100516,109432,85867,92055,101363,94193,114348,89208,107181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[111743,88135,88076,99153,94645,105318,88641,112699,90468,85957,91647,88735,89544,113238,86942],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[85126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[104768,104678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[95566,105796,90306,107068,110674,103512,95003,107952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[67984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[102363,94143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[97126,85868,101014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[64821,60833,66202,66443,67381,67757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[98504,107820,102765,105008,113151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[98505,107281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045732"},{"annotations":[95516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[85686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"positively_regulates","term_name":"catabolic 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regulation of catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of catabolic process","type":"narrow"},{"name":"positive regulation of breakdown","type":"exact"},{"name":"positive regulation of catabolism","type":"exact"},{"name":"positive regulation of degradation","type":"exact"},{"name":"stimulation of catabolic process","type":"narrow"},{"name":"up regulation of catabolic process","type":"exact"},{"name":"up-regulation of catabolic process","type":"exact"},{"name":"upregulation of catabolic process","type":"exact"}],"termid":"GO:0009896","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0010508":null,"GO:0016239":null,"GO:0032436":null,"GO:0036450":null,"GO:0045732":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1903599":null,"GO:1904352":null,"GO:1905786":null,"GO:1990074":null,"GO:2000786":null}}


id: PBO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase (predicted)","termid":"PBO:0001244"}


id: PBO:0053667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 845","termid":"PBO:0053667"}


id: PBO:0067920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 222","termid":"PBO:0067920"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: PBO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_meiosis","termid":"PBO:0031730"}


id: PBO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-22","termid":"PBO:0051060"}


id: GO:0010419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the side chains of pectic rhamnogalacturonan II. A number of structurally distinct di- and oligosaccharides can be attached to the C-3 and C-2 of the backbone, respectively.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnogalacturonan II side chain metabolic process","synonyms":[{"name":"rhamnogalacturonan II side chain metabolism","type":"exact"}],"termid":"GO:0010419"}


id: PBO:0073864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1","termid":"PBO:0073864"}


id: GO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.","definition_xrefs":["GOC:jid","PMID:8974397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of transition from vegetative to reproductive phase","termid":"GO:0048510"}


id: PBO:0108946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 3","termid":"PBO:0108946"}


id: PBO:0081357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 182","termid":"PBO:0081357"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: PBO:0071903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 41","termid":"PBO:0071903"}


id: PBO:0109459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, unknown biological role","termid":"PBO:0109459"}


id: PBO:0052998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2 pseudogene 1","termid":"PBO:0052998"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["UniProtKB:G2TRM4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: PBO:0109368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4B","termid":"PBO:0109368"}


id: PBO:0030837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanine_import","termid":"PBO:0030837"}


id: FYPO:0001744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal biotin import","synonyms":[{"name":"abnormal biotin import across plasma membrane","type":"exact"},{"name":"abnormal biotin import during mitotic cell cycle","type":"related"},{"name":"abnormal biotin import during vegetative growth","type":"exact"},{"name":"abnormal biotin import into cell","type":"exact"},{"name":"abnormal biotin uptake","type":"exact"}],"termid":"FYPO:0001744"}


id: GO:0033112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the cyanelle and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle envelope","termid":"GO:0033112"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: PBO:0074214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 3","termid":"PBO:0074214"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["PMID:8380627","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: SO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that guides the insertion or deletion of uridine residues in mitochondrial mRNAs. This may also refer to synthetic RNAs used to guide DNA editing using the CRIPSR/Cas9 system.","direct_ancestors":[{"relation_name":"has_quality","term_name":"gRNA_encoding","termid":"SO:0000979"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_gene","synonyms":[{"name":"gRNA gene","type":"exact"}],"termid":"SO:0001264"}


id: PBO:0078368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 12-1","termid":"PBO:0078368"}


id: GO:0003352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium movement","secondary_identifiers":["GO:1900172"],"synonyms":[{"name":"regulation of flagellar movement","type":"related"},{"name":"regulation of flagellum movement","type":"related"},{"name":"regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003352"}


id: GO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042517","GO:0042515","GO:0042520","GO:0042529","GO:0042526","GO:0042511","GO:0042523"],"synonyms":[{"name":"activation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"upregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042531"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: PBO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 1 receptor","termid":"PBO:0048702"}


id: PBO:0082510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the COP9 signalosome (CSN) complex; acts as an isopeptidase in cleaving the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; metalloendopeptidase involved in the adaptation to pheromone signaling; involved in modulation of genes controlling amino acid and lipid metabolism, and ergosterol biosynthesis","termid":"PBO:0082510"}


id: FYPO:0003343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000005","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}


id: GO:0022025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of leukemia inhibitory factor to its receptor on the surface of the target cell, that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia inhibitory factor signaling pathway","termid":"GO:0048861"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"leukemia inhibitory factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022025"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PR:O00102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 G2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24067:SF36","OMA:SCHPO03045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.04","secondary_identifiers":["UniProtKB:O00102"],"synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2G2","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00102"}


id: PBO:0080834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 2","termid":"PBO:0080834"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: PBO:0074703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71C","termid":"PBO:0074703"}


id: GO:0010455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate commitment","termid":"GO:0010455"}


id: SO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 7SL RNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7SL_SINE_retrotransposon","synonyms":[{"name":"7SL SINE element","type":"exact"},{"name":"7SL SINE retrotransposon","type":"exact"},{"name":"RSL retrotransposon","type":"exact"}],"termid":"SO:0002275"}


id: GO:0018510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + NADP+ = H+ + NADPH + phloroglucinol.","definition_xrefs":["RHEA:10080","EC:1.3.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phloroglucinol reductase activity","secondary_identifiers":["KEGG_REACTION:R05308","MetaCyc:R5-RXN","UM-BBD_reactionID:r0007"],"synonyms":[{"name":"dihydrophloroglucinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018510"}


id: PBO:0086463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metal transporter involved in mitochondrial iron accumulation; MMT2 has a paralog, MMT1, that arose from the whole genome duplication","termid":"PBO:0086463"}


id: PBO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Cis4","termid":"PBO:0002657"}


id: PBO:0087898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in cell-type-specific transcription and pheromone response; plays a central role in the formation of both repressor and activator complexes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087898"}


id: PBO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell","termid":"PBO:0030785"}


id: GO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-12 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-12 receptor binding","synonyms":[{"name":"IL-12","type":"narrow"},{"name":"interleukin-12 receptor ligand","type":"narrow"}],"termid":"GO:0005143"}


id: GO:2001163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001163)","termid":"GO:2001163"}


id: PBO:0056541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence like","termid":"PBO:0056541"}


id: PBO:0063973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 7","termid":"PBO:0063973"}


id: PBO:0079283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 2","termid":"PBO:0079283"}


id: PBO:0069796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1082, pseudogene","termid":"PBO:0069796"}


id: GO:0099014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule organization","termid":"GO:0061109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal dense core vesicle organization","termid":"GO:0099014"}


id: FYPO:0000739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the occurrence of pigment accumulation in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cellular pigment accumulation phenotype","synonyms":[{"name":"cellular pigment accumulation phenotype during mitotic cell cycle","type":"related"},{"name":"cellular pigment accumulation phenotype during vegetative growth","type":"exact"},{"name":"fission yeast cellular pigment accumulation phenotype","type":"exact"}],"termid":"FYPO:0000739"}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: PBO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 9","termid":"PBO:0060299"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0027104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_tDNA","termid":"PBO:0027104"}


id: PR:O43037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mago nashi homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.08c","synonyms":[{"name":"Spom972h-mnh1","type":"exact"}],"termid":"PR:O43037"}


id: PBO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 131","termid":"PBO:0071129"}


id: PBO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036097"}


id: PBO:0057380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548av","termid":"PBO:0057380"}


id: PBO:0053346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 229","termid":"PBO:0053346"}


id: PBO:0031180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitosis","termid":"PBO:0031180"}


id: GO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of septins and associated proteins to form a tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring assembly","termid":"GO:0000921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}


id: PBO:0089900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase Deg1","termid":"PBO:0089900"}


id: FYPO:0002798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during nitrogen starvation","synonyms":[{"name":"decreased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"decreased protein catabolism during nitrogen starvation","type":"exact"},{"name":"decreased protein degradation during nitrogen depletion","type":"exact"},{"name":"decreased protein degradation during nitrogen deprivation","type":"exact"},{"name":"reduced protein degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002798"}


id: PBO:0076400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit B","termid":"PBO:0076400"}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: PBO:0017614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2 (predicted)","termid":"PBO:0017614"}


id: GO:1905429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18984164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycine","synonyms":[{"name":"response to Gly","type":"exact"},{"name":"response to aminoacetic acid","type":"exact"},{"name":"response to aminoethanoic acid","type":"exact"},{"name":"response to glycin","type":"exact"}],"termid":"GO:1905429"}


id: GO:0048829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root cap over time, from its formation to the mature structure. The root cap protects the root meristem from friction as the root grows through the soil. The cap is made up of a group of parenchyma cells which secrete a glycoprotein mucilage as a lubricant.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap development","termid":"GO:0048829"}


id: PBO:0073673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 2","termid":"PBO:0073673"}


id: PBO:0027203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_microtubules","termid":"PBO:0027203"}


id: PBO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 7 pseudogene","termid":"PBO:0062166"}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: MOD:01328
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - hydroxylethanone","definition_xrefs":["PubMed:17525468","Unimod:6#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid - site W","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01328"}


id: GO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle envelope that surrounds the chromosomes and the central part of the spindle apparatus during mitosis and meiosis; observed in many invertebrates. The spindle envelope consists of membrane layers, called parafusorial membranes, derived from endoplasmic reticulum membrane; in male meiosis it forms during prometaphase and persists until early in the ensuing interphase.","definition_xrefs":["GOC:sart","PMID:19417004","PMID:6428889","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle envelope","termid":"GO:0070732"}


id: GO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + gamma-tocopherol = S-adenosyl-L-homocysteine + alpha-tocopherol.","definition_xrefs":["EC:2.1.1.95","MetaCyc:TOCOPHEROL-O-METHYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tocopherol O-methyltransferase activity","secondary_identifiers":["RHEA:24012"],"synonyms":[{"name":"S-adenosyl-L-methionine:gamma-tocopherol 5-O-methyltransferase activity","type":"related"},{"name":"gamma-tocopherol methyltransferase activity","type":"exact"}],"termid":"GO:0050342"}


id: GO:0016314
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107365],"is_not":false,"summary":null,"term":"GO:0016314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidylinositol-4,5-bisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25017","Reactome:R-HSA-199456","MetaCyc:3.1.3.67-RXN","Reactome:R-HSA-2317387","Reactome:R-HSA-202237"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3,4,5-trisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"MMAC1","type":"related"},{"name":"PI(3)P 3-phosphatase activity","type":"exact"},{"name":"PI(3,4,5)P3 3-phosphatase activity","type":"exact"},{"name":"PtdIns(3,4,5)P3 3-phosphatase activity","type":"exact"},{"name":"phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0016314","terms_by_termid":{"GO:0016314":null}}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["GOC:jl","PMID:11752666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: GO:0102200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acylphosphatidylethanolamine = H+ + an N-acylethanolamine + a 1,2-diacyl-sn-glycerol 3-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetylphosphatidylethanolamine-hydrolysing phospholipase activity (obsolete GO:0102200)","termid":"GO:0102200"}


id: PBO:0066116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member B","termid":"PBO:0066116"}


id: GO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"positively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mononuclear cell migration","synonyms":[{"name":"activation of mononuclear cell migration","type":"narrow"},{"name":"stimulation of mononuclear cell migration","type":"narrow"},{"name":"up regulation of mononuclear cell migration","type":"exact"},{"name":"up-regulation of mononuclear cell migration","type":"exact"},{"name":"upregulation of mononuclear cell migration","type":"exact"}],"termid":"GO:0071677"}


id: PBO:0045343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 3","termid":"PBO:0045343"}


id: PBO:0040346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 3","termid":"PBO:0040346"}


id: PBO:0085061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p","termid":"PBO:0085061"}


id: PBO:0053742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 968","termid":"PBO:0053742"}


id: PBO:0111347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, CGI-48 family Utp18","termid":"PBO:0111347"}


id: PBO:0086725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene","termid":"PBO:0086725"}


id: PBO:0040641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper ATF-like transcription factor 2","termid":"PBO:0040641"}


id: GO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an astrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte development","synonyms":[{"name":"astrocyte cell development","type":"exact"}],"termid":"GO:0014002"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: PBO:0053157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor","termid":"PBO:0053157"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","secondary_identifiers":["MetaCyc:SUCUTIL-PWY"],"synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: PBO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-conjugate-exporting ATPase Abc4","termid":"PBO:0002501"}


id: GO:0051483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, independent of mevalonate. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-independent biosynthesis, it is produced from pyruvate and glyceraldehyde 3-phosphate via intermediates including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-independent","synonyms":[{"name":"mevalonate-independent terpene biosynthesis","type":"narrow"},{"name":"mevalonate-independent terpene biosynthetic process","type":"narrow"},{"name":"mevalonate-independent terpenoid biosynthesis","type":"exact"},{"name":"mevalonate-independent terpenoid biosynthetic process","type":"exact"},{"name":"terpene biosynthesis, mevalonate-independent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-independent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-independent","type":"exact"},{"name":"terpenoid formation, mevalonate-independent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-independent","type":"exact"}],"termid":"GO:0051483"}


id: PBO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 2","termid":"PBO:0042442"}


id: GO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium.","definition_xrefs":["GOC:dgh","GOC:dph","PMID:15157725","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell precursor tangential migration","termid":"GO:0021935"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: PR:O74889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac3 gene.","definition_xrefs":["UniProtKB:O74889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.05","synonyms":[{"name":"Spom972h-sac3","type":"exact"}],"termid":"PR:O74889"}


id: GO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:sdb_2009","ISBN:0878932437","GOC:tb","GOC:dph","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"embryonic camera-type eye formation","termid":"GO:0060900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup morphogenesis involved in camera-type eye development","synonyms":[{"name":"optic cup morphogenesis involved in camera-style eye development","type":"exact"}],"termid":"GO:0002072"}


id: PR:O74434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug174 gene.","definition_xrefs":["UniProtKB:O74434","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 174 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.03c","synonyms":[{"name":"Spom972h-mug174","type":"exact"}],"termid":"PR:O74434"}


id: GO:0005811
data:
  {"annotated_genes":["SJAG_02487","SJAG_02163","SJAG_04041","SJAG_00624","SJAG_04532","SJAG_04973","SJAG_03235","SJAG_02089","SJAG_02980","SJAG_03909","SJAG_03360","SJAG_03471","SJAG_03609","SJAG_02907","SJAG_02161","SJAG_01036","SJAG_03604","SJAG_02543"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65749,84914,86202,86280,88035,90172,90777,93814,93902,93913,94601,98324,100802,101699,109525,110284,110887,113645],"is_not":false,"summary":null,"term":"GO:0005811"}]},"cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_01036":null,"SJAG_02089":null,"SJAG_02161":null,"SJAG_02163":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_02980":null,"SJAG_03235":null,"SJAG_03360":null,"SJAG_03471":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_03909":null,"SJAG_04041":null,"SJAG_04532":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lipid droplet","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"adiposome","type":"exact"},{"name":"lipid body","type":"exact"},{"name":"lipid particle","type":"exact"}],"termid":"GO:0005811","terms_by_termid":{"GO:0005811":null}}


id: PBO:0084652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of pyruvate decarboxylase; key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde, regulation is glucose- and ethanol-dependent, repressed by thiamine, involved in amino acid catabolism","termid":"PBO:0084652"}


id: FYPO:0003672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ATP binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ATP binding","synonyms":[{"name":"ATP binding abolished","type":"exact"}],"termid":"FYPO:0003672"}


id: FYPO:0006648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA/RNA helicase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"reduced 5'-3' DNA/RNA helicase activity","type":"exact"}],"termid":"FYPO:0006648"}


id: PBO:0027836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_disassembly","termid":"PBO:0027836"}


id: PBO:0085091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085091"}


id: PBO:0030037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_meiotic_cell_cycle","termid":"PBO:0030037"}


id: PBO:0084294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular sporulation-specific glucoamylase; involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation","termid":"PBO:0084294"}


id: FYPO:0007863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to spindle","synonyms":[{"name":"abnormal protein localisation to spindle","type":"exact"}],"termid":"FYPO:0007863"}


id: PBO:0047398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 36 pseudogene 1","termid":"PBO:0047398"}


id: PBO:0056903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF antisense RNA 1","termid":"PBO:0056903"}


id: PBO:0046683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 1","termid":"PBO:0046683"}


id: GO:0000070
data:
  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id: _global:causal_agent_in_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship between a material entity and a process where the material entity has some causal role that influences the process","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"_global:causal_relation_between_material_entity_and_a_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_agent_in_process","secondary_identifiers":["RO:0002500"],"termid":"_global:causal_agent_in_process"}


id: PBO:0056023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 1","termid":"PBO:0056023"}


id: GO:0071167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex import into nucleus (obsolete GO:0071167)","synonyms":[{"name":"RNP import into nucleus","type":"exact"},{"name":"ribonucleoprotein complex import into cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus import","type":"exact"},{"name":"ribonucleoprotein complex targeting to nucleus","type":"exact"},{"name":"ribonucleoprotein complex transport from cytoplasm to nucleus","type":"exact"},{"name":"ribonucleoprotein import into nucleus","type":"exact"}],"termid":"GO:0071167"}


id: PBO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1751 family protein","termid":"PBO:0005043"}


id: PBO:0056829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondria localized glutamic acid rich protein","termid":"PBO:0056829"}


id: GO:1905451
data:
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id: GO:0051152
data:
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id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: GO:0016944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase II following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription elongation factor activity (obsolete GO:0016944)","synonyms":[{"name":"Pol II transcription elongation factor activity","type":"exact"},{"name":"RNA polymerase II transcription elongation factor activity","type":"exact"}],"termid":"GO:0016944"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: PBO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 7","termid":"PBO:0050190"}


id: GO:0047018
data:
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id: GO:0008273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in).","definition_xrefs":["TC:2.A.19.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"},{"relation_name":"is_a","term_name":"solute:potassium antiporter activity","termid":"GO:0022821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"calcium, potassium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-2514891","Reactome:R-HSA-5625841","Reactome:R-HSA-5626270","Reactome:R-HSA-425678","Reactome:R-HSA-5626316","Reactome:R-HSA-5626356","RHEA:69967"],"synonyms":[{"name":"potassium-dependent sodium/calcium exchanger","type":"related"}],"termid":"GO:0008273"}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107801],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: FYPO:0007777
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115593,115597],"is_not":false,"summary":null,"term":"FYPO:0007777"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form more branched filaments than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"increased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"increased number of branched filaments","type":"exact"}],"termid":"FYPO:0007777","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007777":null,"FYPO_EXT:0000002":null}}


id: PBO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase Tit1","termid":"PBO:0013759"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: GO:1905882
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any cell wall that is part of a other organism.","definition_xrefs":["GO_REF:0000064","PMID:12438152","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism cell wall (obsolete GO:1905882)","termid":"GO:1905882"}


id: PBO:0044370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoglobin","termid":"PBO:0044370"}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: GO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of male germ cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ cell proliferation","termid":"GO:0002176"}


id: PBO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 1","termid":"PBO:0071795"}


id: PBO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 82","termid":"PBO:0071080"}


id: MOD:01215
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to O4-(carboxamidomethyl)aspartate.","definition_xrefs":["PubMed:16526082","PubMed:11510821","Unimod:4#D","OMSSA:29","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized aspartic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyld","type":"exact"}],"termid":"MOD:01215"}


id: PBO:0040402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 3","termid":"PBO:0040402"}


id: GO:0003991
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94296],"is_not":false,"summary":null,"term":"GO:0003991"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.","definition_xrefs":["EC:2.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetylglutamate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACETYLGLUTKIN-RXN","RHEA:14629"],"synonyms":[{"name":"ATP:N-acetyl-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate kinase activity","type":"related"},{"name":"N-acetylglutamate phosphokinase activity","type":"related"},{"name":"N-acetylglutamic 5-phosphotransferase activity","type":"related"},{"name":"acetylglutamate phosphokinase activity","type":"related"}],"termid":"GO:0003991","terms_by_termid":{"GO:0003991":null}}


id: PBO:0059528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 5S-like sequence","termid":"PBO:0059528"}


id: PBO:0085766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; putative serine/threonine kinase; expression is induced during mild heat stress; deletion mutants are hypersensitive to copper sulphate and resistant to sorbate; interacts with an N-terminal fragment of Sst2p","termid":"PBO:0085766"}


id: GO:0006054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate metabolic process","synonyms":[{"name":"N-acetylneuraminate metabolism","type":"exact"},{"name":"sialic acid metabolic process","type":"broad"},{"name":"sialic acid metabolism","type":"broad"}],"termid":"GO:0006054"}


id: PBO:0065361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 2","termid":"PBO:0065361"}


id: PBO:0068452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 28, pseudogene","termid":"PBO:0068452"}


id: PBO:0070919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 27","termid":"PBO:0070919"}


id: PBO:0030662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcriptional_response_to_pheromone","termid":"PBO:0030662"}


id: GO:0090346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organofluorine metabolic process","termid":"GO:0090346"}


id: PBO:0089277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex catalytic subunit Naa20","termid":"PBO:0089277"}


id: PR:O59721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.10","synonyms":[{"name":"Spom972h-pus4","type":"exact"},{"name":"psi55 synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridine(55) synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA pseudouridylate synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59721"}


id: PBO:0087352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein","termid":"PBO:0087352"}


id: GO:0010871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor biosynthetic process (obsolete GO:0010871)","termid":"GO:0010871"}


id: GO:0061653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of ISG15 from one protein to another via the reaction X-ISG15 + Y = Y-ISG15 + X, where both the X-ISG15 and Y-ISG15 linkages are thioester bonds between the C-terminal amino acid of ISG15 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISG15 transferase activity","termid":"GO:0042296"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0019787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"ISG15 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061653"}


id: PBO:0075956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM binding protein like 1","termid":"PBO:0075956"}


id: PBO:0091652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amf1","termid":"PBO:0091652"}


id: PBO:0004959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family C26 protein","termid":"PBO:0004959"}


id: PBO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1A","termid":"PBO:0044638"}


id: PBO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)","termid":"PBO:0000173"}


id: PBO:0082169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants","termid":"PBO:0082169"}


id: PBO:0080542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 1","termid":"PBO:0080542"}


id: GO:0005955
data:
  {"annotated_genes":["SJAG_03793","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109461,114619],"is_not":false,"summary":null,"term":"GO:0005955"}]},"cv_name":"cellular_component","definition":"A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.","definition_xrefs":["PMID:26794871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03631":null,"SJAG_03793":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcineurin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase complex","type":"narrow"},{"name":"protein phosphatase type 2B complex","type":"exact"}],"termid":"GO:0005955","terms_by_termid":{"GO:0005955":null}}


id: GO:0004842
data:
  {"annotated_genes":["SJAG_03615","SJAG_04309","SJAG_00931","SJAG_00435","SJAG_04429","SJAG_03324","SJAG_03613","SJAG_03387","SJAG_04600","SJAG_01679","SJAG_04612","SJAG_01593","SJAG_00500","SJAG_00293","SJAG_00341","SJAG_01772","SJAG_01212","SJAG_00300","SJAG_02575","SJAG_02521","SJAG_05274","SJAG_02668","SJAG_03968","SJAG_03175","SJAG_00819","SJAG_02319","SJAG_03618","SJAG_02169","SJAG_01535","SJAG_00188","SJAG_01637","SJAG_00509","SJAG_03006","SJAG_00208","SJAG_04151","SJAG_01854","SJAG_03883","SJAG_01507","SJAG_05236","SJAG_02851","SJAG_00173","SJAG_02347","SJAG_00475","SJAG_03112","SJAG_04573","SJAG_00561","SJAG_01533","SJAG_04915","SJAG_01992","SJAG_03970","SJAG_03657","SJAG_00552","SJAG_04990","SJAG_04966","SJAG_02918","SJAG_02746","SJAG_05264","SJAG_03191","SJAG_00111","SJAG_05323","SJAG_04619","SJAG_01360","SJAG_05340","SJAG_02685","SJAG_03005","SJAG_02308","SJAG_00855","SJAG_01253","SJAG_01900","SJAG_00209","SJAG_04857","SJAG_02371","SJAG_03860","SJAG_03831","SJAG_05022","SJAG_01165","SJAG_02299","SJAG_04783"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93524],"is_not":false,"summary":null,"term":"GO:0004842"},{"annotations":[112309,114890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[90485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[84208,98233,83997,102558,84364,98096,104291,98384,87389,109095,112877,110372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[97306,99149,85716,108195,92654,84209,99532,109775,100476,92738,100407,114488,86376,97988,104120,108924,112797,101090,91533,89707,84288,102000,85892,106083,101342,92841,109683,86064,102981,109506,84827,110108,87221,90486,84423,84219,99548,104995,113275,105764,111500,87820,96376,92922,103984,112798,84507,85514,88908,86891,97427,85080,110425,113315,106347,101061,85961,94674,101400,103063,78810,91951,95518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[88838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.","definition_xrefs":["PMID:9635407","GOC:jh2","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase 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activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-264444","Reactome:R-HSA-3134804","Reactome:R-HSA-9688831","Reactome:R-HSA-1358792","Reactome:R-HSA-5607756","Reactome:R-HSA-936942","Reactome:R-HSA-1852623","Reactome:R-HSA-2186785","Reactome:R-HSA-183051","Reactome:R-HSA-2900765","Reactome:R-HSA-9796626","Reactome:R-HSA-9817362","Reactome:R-HSA-9833973","Reactome:R-HSA-450358","Reactome:R-HSA-187575","Reactome:R-HSA-173542","Reactome:R-HSA-180540","Reactome:R-HSA-202453","Reactome:R-HSA-3134946","Reactome:R-HSA-2737728","Reactome:R-HSA-1169397","Reactome:R-HSA-9013069","Reactome:R-HSA-983153","Reactome:R-HSA-205118","Reactome:R-HSA-5607725","Reactome:R-HSA-68712","Reactome:R-HSA-69598","Reactome:R-HSA-174159","KEGG_REACTION:R03876","Reactome:R-HSA-5684250","Reactome:R-HSA-174227","Reactome:R-HSA-180597","Reactome:R-HSA-5610742","Reactome:R-HSA-5607728","Reactome:R-HSA-202534","Reactome:R-HSA-75824","Reactome:R-HSA-870449","Reactome:R-HSA-201425","Reactome:R-HSA-5610746","Reactome:R-HSA-8948709","Reactome:R-HSA-8956106","Reactome:R-HSA-936412","Reactome:R-HSA-9628444","Reactome:R-HSA-9701000","Reactome:R-HSA-5655170","Reactome:R-HSA-5667107","Reactome:R-HSA-1169402","Reactome:R-HSA-2186747","Reactome:R-HSA-1169394","Reactome:R-HSA-1358790","Reactome:R-HSA-5652009","Reactome:R-HSA-9013974","Reactome:R-HSA-983140","Reactome:R-HSA-983156","Reactome:R-HSA-5362412","Reactome:R-HSA-9750946","Reactome:R-HSA-3000335","Reactome:R-HSA-5693108","Reactome:R-HSA-1980118","Reactome:R-HSA-5483238","Reactome:R-HSA-975147","Reactome:R-HSA-2213017","Reactome:R-HSA-1918092","Reactome:R-HSA-400267","Reactome:R-HSA-3780995","Reactome:R-HSA-9793679","Reactome:R-HSA-182986","Reactome:R-HSA-5668454","Reactome:R-HSA-936986","Reactome:R-HSA-4332236","Reactome:R-HSA-168915","Reactome:R-HSA-1912386","Reactome:R-HSA-2187368","Reactome:R-HSA-174104","Reactome:R-HSA-3788724","Reactome:R-HSA-975118","Reactome:R-HSA-1169406","Reactome:R-HSA-5357757","Reactome:R-HSA-9793485","Reactome:R-HSA-9815507","Reactome:R-HSA-9796346","Reactome:R-HSA-1169405","Reactome:R-HSA-1169398","Reactome:R-HSA-174144","Reactome:R-HSA-209063","GO:0004841","Reactome:R-HSA-9793444","Reactome:R-HSA-9796387","Reactome:R-HSA-5675470","Reactome:R-HSA-9645414","Reactome:R-HSA-2179276","Reactome:R-HSA-9758604","Reactome:R-HSA-182993","Reactome:R-HSA-2169050","Reactome:R-HSA-9645394","Reactome:R-HSA-5660753","Reactome:R-HSA-183084","Reactome:R-HSA-918224","Reactome:R-HSA-5668534","Reactome:R-HSA-451418","Reactome:R-HSA-174057","Reactome:R-HSA-1363331","Reactome:R-HSA-174195","Reactome:R-HSA-179417","Reactome:R-HSA-446877","Reactome:R-HSA-9014342","Reactome:R-HSA-2769007","Reactome:R-HSA-1980074","Reactome:R-HSA-5667111","Reactome:R-HSA-9833155","Reactome:R-HSA-173545","Reactome:R-HSA-1912357","Reactome:R-HSA-5691108","Reactome:R-HSA-741386","Reactome:R-HSA-1977296","GO:0004840","Reactome:R-HSA-1358789","Reactome:R-HSA-3781009","Reactome:R-HSA-2730904","Reactome:R-HSA-1234172","Reactome:R-HSA-1253282","Reactome:R-HSA-5610745","Reactome:R-HSA-2172172","Reactome:R-HSA-1234163","Reactome:R-HSA-5607757","Reactome:R-HSA-1169395","Reactome:R-HSA-3249386","Reactome:R-HSA-211734","Reactome:R-HSA-1918095","Reactome:R-HSA-2682349","Reactome:R-HSA-3797226","Reactome:R-HSA-183089","Reactome:R-HSA-5205682"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"broad"},{"name":"ubiquitin conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin ligase activity","type":"narrow"},{"name":"ubiquitin protein ligase activity","type":"narrow"},{"name":"ubiquitin protein-ligase activity","type":"narrow"},{"name":"ubiquitin-conjugating enzyme activity","type":"narrow"}],"termid":"GO:0004842","terms_by_termid":{"GO:0004842":null,"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0073362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family F member 2","termid":"PBO:0073362"}


id: GO:0019185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that recognizes the proximal sequence element of RNA polymerase II and III snRNA promoters.","definition_xrefs":["PMID:7715707","PMID:9003788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"snRNA-activating protein complex","synonyms":[{"name":"SNAPc","type":"exact"}],"termid":"GO:0019185"}


id: PBO:0077760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 2","termid":"PBO:0077760"}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: GO:0141163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cAMP/PKA signal transduction.","definition_xrefs":["PMID:21585352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cAMP/PKA signal transduction","termid":"GO:0141161"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cAMP/PKA signal transduction","termid":"GO:0141156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cAMP/PKA signal transduction","synonyms":[{"name":"positive regulation of cAMP/PKA signaling","type":"exact"}],"termid":"GO:0141163"}


id: FYPO:0000076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nystatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to nystatin","synonyms":[{"name":"resistance to nystatin during mitotic cell cycle","type":"related"},{"name":"resistance to nystatin during vegetative growth","type":"exact"},{"name":"resistant to nystatin","type":"exact"}],"termid":"FYPO:0000076"}


id: PBO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 6","termid":"PBO:0060570"}


id: PBO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERG-positive prostate cancer associated androgen responsive transcript","termid":"PBO:0046410"}


id: PBO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nebulin-family actin filament anchoring protein Cyk3 (predicted)","termid":"PBO:0036277"}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","termid":"GO:0017187"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: GO:0098528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube differentiation","termid":"GO:0014902"},{"relation_name":"is_a","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}


id: PBO:0108955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA5 pseudogene 1","termid":"PBO:0108955"}


id: SO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles. Nest should not have Proline as any residue. Nests frequently occur as parts of other motifs such as Schellman loops.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_motif","secondary_identifiers":["BS:00223"],"synonyms":[{"name":"nest","type":"related"},{"name":"nest_motif","type":"exact"},{"name":"polypeptide nest motif","type":"related"}],"termid":"SO:0001120"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","PMID:18216290","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: PBO:0060632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin","termid":"PBO:0060632"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: GO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chromatophore, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chromatophore ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"}],"termid":"GO:0048494"}


