# terms

id: PBO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR96","termid":"PBO:0016920"}


id: PBO:0080939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel pseudogene 1","termid":"PBO:0080939"}


id: MOD:01122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dCytidinyl","termid":"MOD:01122"}


id: GO:0010135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ureide, allantoin and allantoate, which are the organic forms of nitrogen in nitrogen fixing and transporting plants.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide metabolic process","synonyms":[{"name":"ureide metabolism","type":"exact"}],"termid":"GO:0010135"}


id: PBO:0083802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein suggested to function early in the secretory pathway; inviability is suppressed by overexpression of Golgi protein Tvp23p; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and cytosol respectively; ortholog of human Kish","termid":"PBO:0083802"}


id: PR:O74430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.09 gene.","definition_xrefs":["UniProtKB:O74430","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C1672.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.09","synonyms":[{"name":"Spom972h-SPCC1672.09","type":"exact"}],"termid":"PR:O74430"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: GO:1901620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901620"}


id: GO:0097499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-motile cilium.","definition_xrefs":["GOC:cilia","GOC:kmv","PMID:23128241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to non-motile cilium","synonyms":[{"name":"protein localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0097499"}


id: PBO:0055187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2611","termid":"PBO:0055187"}


id: PBO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.19","termid":"PBO:0002640"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: MOD:01502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["OMSSA:175","Unimod:214#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ116Y","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01502"}


id: PBO:0040651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1","termid":"PBO:0040651"}


id: PBO:0088046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme that regulates gluconeogenesis; negatively regulates gluconeogenesis by mediating the glucose-induced ubiquitination of fructose-1,6-bisphosphatase (FBPase); cytoplasmic enzyme that catalyzes the ubiquitination of histones in vitro","termid":"PBO:0088046"}


id: GO:0042369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006766","GO:0044248","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"vitamin D catabolic process","synonyms":[{"name":"calciferol catabolic process","type":"narrow"},{"name":"calciferol catabolism","type":"narrow"},{"name":"cholecalciferol biosynthesis","type":"narrow"},{"name":"cholecalciferol biosynthetic process","type":"narrow"},{"name":"ergocalciferol biosynthesis","type":"narrow"},{"name":"ergocalciferol biosynthetic process","type":"narrow"},{"name":"vitamin D breakdown","type":"exact"},{"name":"vitamin D catabolism","type":"exact"},{"name":"vitamin D degradation","type":"exact"}],"termid":"GO:0042369"}


id: PBO:0053676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 861","termid":"PBO:0053676"}


id: GO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is secreted into extracellular space and found in mucosal areas or other tissues or circulating in the blood or lymph. In its canonical form, a circulating immunoglobulin complex is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms of are polymers of the basic structure and contain additional components such as J-chain and the secretory component.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"immunoglobulin complex, circulating","secondary_identifiers":["Wikipedia:Antibody"],"synonyms":[{"name":"antibody","type":"exact"}],"termid":"GO:0042571"}


id: GO:0120236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["PMID:32513868","GOC:krc","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of post-translational protein targeting to membrane, translocation","termid":"GO:0120235"},{"relation_name":"negatively_regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"negative regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"negative regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"negative regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"negative regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120236"}


id: PBO:0053967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1277","termid":"PBO:0053967"}


id: PBO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0017549"}


id: PR:O42993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh1 gene.","definition_xrefs":["UniProtKB:O42993","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.17c","synonyms":[{"name":"FK506-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FKBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC24E9.17c","type":"related"},{"name":"Spom972h-fkh1","type":"exact"}],"termid":"PR:O42993"}


id: PBO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC3 divergent transcript","termid":"PBO:0045208"}


id: GO:0040028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ma","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vulval development","termid":"GO:0040028"}


id: GO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system process","synonyms":[{"name":"organ system process","type":"exact"}],"termid":"GO:0003008"}


id: PBO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoclonal antibodies","termid":"PBO:0003125"}


id: PBO:0058864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9851","termid":"PBO:0058864"}


id: MOD:00007
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom for a sulfur atom.","definition_xrefs":["Unimod:162","PubMed:12148805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium substitution for sulfur","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Se(S)Res","type":"exact"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:00007"}


id: PBO:0071300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 23","termid":"PBO:0071300"}


id: PBO:0068819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 57, pseudogene","termid":"PBO:0068819"}


id: GO:1901183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of camalexin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin biosynthetic process","termid":"GO:0052322"},{"relation_name":"is_a","term_name":"regulation of camalexin biosynthetic process","termid":"GO:1901182"},{"relation_name":"positively_regulates","term_name":"camalexin biosynthetic process","termid":"GO:0010120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of camalexin biosynthetic process","synonyms":[{"name":"activation of camalexin anabolism","type":"exact"},{"name":"activation of camalexin biosynthesis","type":"exact"},{"name":"activation of camalexin biosynthetic process","type":"narrow"},{"name":"activation of camalexin formation","type":"exact"},{"name":"activation of camalexin synthesis","type":"exact"},{"name":"positive regulation of camalexin anabolism","type":"exact"},{"name":"positive regulation of camalexin biosynthesis","type":"exact"},{"name":"positive regulation of camalexin formation","type":"exact"},{"name":"positive regulation of camalexin synthesis","type":"exact"},{"name":"up regulation of camalexin anabolism","type":"exact"},{"name":"up regulation of camalexin biosynthesis","type":"exact"},{"name":"up regulation of camalexin biosynthetic process","type":"exact"},{"name":"up regulation of camalexin formation","type":"exact"},{"name":"up regulation of camalexin synthesis","type":"exact"},{"name":"up-regulation of camalexin anabolism","type":"exact"},{"name":"up-regulation of camalexin biosynthesis","type":"exact"},{"name":"up-regulation of camalexin biosynthetic process","type":"exact"},{"name":"up-regulation of camalexin formation","type":"exact"},{"name":"up-regulation of camalexin synthesis","type":"exact"},{"name":"upregulation of camalexin anabolism","type":"exact"},{"name":"upregulation of camalexin biosynthesis","type":"exact"},{"name":"upregulation of camalexin biosynthetic process","type":"exact"},{"name":"upregulation of camalexin formation","type":"exact"},{"name":"upregulation of camalexin synthesis","type":"exact"}],"termid":"GO:1901183"}


id: PBO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 4","termid":"PBO:0043407"}


id: GO:0071915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of lysine group to a lysine residue in a protein, producing N6-(lysyl)-L-lysine. This modification is observed in, and is probably unique to, translation elongation factor P (EF-P).","definition_xrefs":["PMID:20729861","GOC:jsg","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"part_of","term_name":"bacterial-type EF-P lysine modification","termid":"GO:0072580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lysine lysylation","synonyms":[{"name":"protein amino acid lysylation","type":"exact"}],"termid":"GO:0071915"}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: PBO:0065169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase 2","termid":"PBO:0065169"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: PBO:0069994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1289, pseudogene","termid":"PBO:0069994"}


id: PBO:0028910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_organization_during_vegetative_growth","termid":"PBO:0028910"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: GO:0102619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin A + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin A dependent) activity (obsolete GO:0102619)","termid":"GO:0102619"}


id: GO:0050850
data:
  {"annotated_genes":["SJAG_04551","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98266,107089],"is_not":false,"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01181":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium-mediated signaling","type":"narrow"},{"name":"positive regulation of calcium-mediated signalling","type":"exact"},{"name":"stimulation of calcium-mediated signaling","type":"narrow"},{"name":"up regulation of calcium-mediated signaling","type":"exact"},{"name":"up-regulation of calcium-mediated signaling","type":"exact"},{"name":"upregulation of calcium-mediated signaling","type":"exact"}],"termid":"GO:0050850","terms_by_termid":{"GO:0050850":null}}


id: PBO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc14","termid":"PBO:0002562"}


id: PBO:0056852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489","termid":"PBO:0056852"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: PBO:0051590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20 receptor subunit beta","termid":"PBO:0051590"}


id: PR:O94733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.01 gene.","definition_xrefs":["UniProtKB:O94733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.01","synonyms":[{"name":"Spom972h-SPCC191.01","type":"exact"}],"termid":"PR:O94733"}


id: PBO:0083024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; originally included in genome annotation, but later deleted due to sequence correction","termid":"PBO:0083024"}


id: FYPO:0001169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proton (H+) transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal proton transport","synonyms":[{"name":"normal hydrogen ion transport","type":"exact"},{"name":"normal proton transmembrane transport","type":"exact"},{"name":"normal proton transport during mitotic cell cycle","type":"related"},{"name":"normal proton transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001169"}


id: GO:0090038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase C signaling","termid":"GO:0090036"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase C signaling","synonyms":[{"name":"negative regulation of protein kinase C signaling cascade","type":"related"},{"name":"negative regulation of protein kinase C signalling cascade","type":"related"}],"termid":"GO:0090038"}


id: PBO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin","termid":"PBO:0000316"}


id: PBO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Agl1","termid":"PBO:0001816"}


id: PR:O00103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-20 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.15c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc11","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00103"}


id: PBO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: SO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U6atac_snRNA is an snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U4atac_snRNA (SO:0000394).","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6atac_snRNA","synonyms":[{"name":"U6atac small nuclear RNA","type":"exact"},{"name":"U6atac snRNA","type":"exact"},{"name":"snRNA U6atac","type":"exact"}],"termid":"SO:0000397"}


id: PBO:0062848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSTN antisense RNA 1","termid":"PBO:0062848"}


id: PBO:0044522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB adaptor protein 2","termid":"PBO:0044522"}


id: PBO:0073589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 1","termid":"PBO:0073589"}


id: GO:1902662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["PMID:23444136","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902662"}


id: PBO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase interaction types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_physically","termid":"PBO:0000038"}


id: PBO:0110240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome coplex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110240"}


id: PBO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 126","termid":"PBO:0042783"}


id: PATO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodistally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodistal orientation","synonyms":[{"name":"postero-distal orientation","type":"exact"}],"termid":"PATO:0002527"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: GO:0008246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Works in conjunction with acyl-CoA dehydrogenase to catalyze the oxidation of CoA and reduce ubiquinone. Part of the mitochondrial electron transport system.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein (obsolete GO:0008246)","synonyms":[{"name":"ETF","type":"exact"},{"name":"electron transfer flavoprotein","type":"exact"}],"termid":"GO:0008246"}


id: PBO:0052393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIFAP3 antisense RNA 1","termid":"PBO:0052393"}


id: FYPO:0000066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-azetidine-2-carboxylic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to L-azetidine-2-carboxylic acid","synonyms":[{"name":"resistance to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"resistance to AZC","type":"broad"},{"name":"resistance to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"resistance to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"},{"name":"resistant to L-azetidine-2-carboxylic acid","type":"exact"}],"termid":"FYPO:0000066"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: GO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity","secondary_identifiers":["GO:0004870"],"synonyms":[{"name":"cystatin","type":"narrow"},{"name":"cysteine protease inhibitor activity","type":"narrow"},{"name":"thiol protease inhibitor","type":"narrow"}],"termid":"GO:0004869"}


id: GO:0140903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 26) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 26). This reaction is the addition of a methyl group to the arginine residue at position 26 of histone H3.","definition_xrefs":["PMID:17882261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3R26 methyltransferase activity","synonyms":[{"name":"histone H3R26 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H3-R26 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R26 specific)","type":"exact"},{"name":"histone-H3R26 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140903"}


id: PBO:0040621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF nuclear assembly factor 1","termid":"PBO:0040621"}


id: FYECO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range higher than normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at high temperature","termid":"FYECO:0000323"}


id: PBO:0067104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 146, pseudogene","termid":"PBO:0067104"}


id: PBO:0068445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 19, pseudogene","termid":"PBO:0068445"}


id: PBO:0078684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 17-1","termid":"PBO:0078684"}


id: GO:0006746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the reduced form of flavin adenine dinucleotide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"FADH2 metabolic process","synonyms":[{"name":"FADH2 metabolism","type":"exact"},{"name":"reduced flavin adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0006746"}


id: PBO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 1","termid":"PBO:0044489"}


id: GO:1990324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXVI) chains.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXVI trimer","termid":"GO:1990324"}


id: PBO:0060712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 9","termid":"PBO:0060712"}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: GO:1902269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of polyamine transmembrane transport","termid":"GO:1902267"},{"relation_name":"positively_regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of polyamine transmembrane transport","synonyms":[{"name":"activation of polyamine transmembrane transport","type":"narrow"},{"name":"up regulation of polyamine transmembrane transport","type":"exact"},{"name":"up-regulation of polyamine transmembrane transport","type":"exact"},{"name":"upregulation of polyamine transmembrane transport","type":"exact"}],"termid":"GO:1902269"}


id: GO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell during the postembryonic period that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic cardiac muscle cell growth involved in heart morphogenesis","termid":"GO:0003247"}


id: PBO:0012217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_movement_of","termid":"PBO:0012217"}


id: FYPO:0005739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the division of chromosomes into two distinct unequal masses containing unseparated sister chromatids, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:11792803","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation with unseparated chromosomes","termid":"FYPO:0005739"}


id: GO:1901798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction by p53 class mediator","synonyms":[{"name":"activation of signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:1901798"}


id: PBO:0088299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4646 family conserved fungal protein","termid":"PBO:0088299"}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_02916","SJAG_02278","SJAG_04666","SJAG_00424","SJAG_04236","SJAG_01028","SJAG_03057","SJAG_00610","SJAG_04184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85321,105191,100291,110480,113853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[88568,98968,85611,91070],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PATO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to retain radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absorption quality","termid":"PATO:0001293"}


id: FYPO:0002728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal, when the cell is in a culture entering stationary phase. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PMID:2743431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated cell with enlarged nucleus","termid":"FYPO:0002083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000631","FYPO:0002403","FYPO:0000005","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus upon entry into stationary phase","synonyms":[{"name":"lethal; swollen elongated cell with enlarged nucleus upon entry into stationary phase","type":"exact"}],"termid":"FYPO:0002728"}


id: PBO:0089223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh2","termid":"PBO:0089223"}


id: GO:0018830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-hexachlorocyclohexane + HCl = 1,3(R),4(S),5(S),6(R)-pentachlorocyclohexene.","definition_xrefs":["UM-BBD_enzymeID:e0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"gamma-hexachlorocyclohexane dehydrochlorinase activity","secondary_identifiers":["EC:4.5.1.-"],"termid":"GO:0018830"}


id: PBO:0027918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_mating","termid":"PBO:0027918"}


id: FYPO:0001641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular tyrosine level","synonyms":[{"name":"normal cellular L-tyrosine level","type":"exact"},{"name":"normal cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal cellular tyrosine level during vegetative growth","type":"exact"},{"name":"normal level of tyrosine in cell","type":"exact"}],"termid":"FYPO:0001641"}


id: GO:0120215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"positively_regulates","term_name":"histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of histidine biosynthetic process","synonyms":[{"name":"activation of histidine anabolism","type":"narrow"},{"name":"activation of histidine biosynthesis","type":"narrow"},{"name":"activation of histidine biosynthetic process","type":"narrow"},{"name":"activation of histidine formation","type":"narrow"},{"name":"activation of histidine synthesis","type":"narrow"},{"name":"positive regulation of histidine anabolism","type":"exact"},{"name":"positive regulation of histidine biosynthesis","type":"exact"},{"name":"positive regulation of histidine formation","type":"exact"},{"name":"positive regulation of histidine synthesis","type":"exact"},{"name":"up regulation of histidine anabolism","type":"exact"},{"name":"up regulation of histidine biosynthesis","type":"exact"},{"name":"up regulation of histidine biosynthetic process","type":"exact"},{"name":"up regulation of histidine formation","type":"exact"},{"name":"up regulation of histidine synthesis","type":"exact"},{"name":"up-regulation of histidine anabolism","type":"exact"},{"name":"up-regulation of histidine biosynthesis","type":"exact"},{"name":"up-regulation of histidine biosynthetic process","type":"exact"},{"name":"up-regulation of histidine formation","type":"exact"},{"name":"up-regulation of histidine synthesis","type":"exact"},{"name":"upregulation of histidine anabolism","type":"exact"},{"name":"upregulation of histidine biosynthesis","type":"exact"},{"name":"upregulation of histidine biosynthetic process","type":"exact"},{"name":"upregulation of histidine formation","type":"exact"},{"name":"upregulation of histidine synthesis","type":"exact"}],"termid":"GO:0120215"}


id: PBO:0029247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0029247"}


id: PBO:0049036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 25","termid":"PBO:0049036"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: FYPO:0008175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal oxygen consumption","termid":"FYPO:0008175"}


id: FYPO:0007423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs less frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:32355220","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gross chromosomal rearrangement","termid":"FYPO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased isochromosome formation","synonyms":[{"name":"decreased isochromosome formation during mitotic cell cycle","type":"related"},{"name":"decreased isochromosome formation during vegetative growth","type":"exact"},{"name":"decreased occurrence of isochromosome formation","type":"exact"},{"name":"reduced isochromosome formation","type":"exact"}],"termid":"FYPO:0007423"}


id: GO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride metabolic process","termid":"GO:0090207"}


id: PATO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000654 alcochol value (obsolete PATO:0000654)","termid":"PATO:0000654"}


id: PBO:0036198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036198"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["PubMed:1694179","RESID:AA0151#var","PubMed:5490222","Unimod:137#N","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: PBO:0089445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, no S. pombe detected","termid":"PBO:0089445"}


id: PR:O42853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B1 CTD phosphatase rtr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.16c","synonyms":[{"name":"RNA polymerase II-associated protein 2 homolog rtr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rtr1","type":"exact"}],"termid":"PR:O42853"}


id: PBO:0030048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric_iron_import","termid":"PBO:0030048"}


id: GO:0000347
data:
  {"annotated_genes":["SJAG_05328","SJAG_04202","SJAG_04310","SJAG_04115","SJAG_00992","SJAG_04536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112150,112406,97980,107227,114970,88332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex is a nuclear complex that is required for transcription elongation through genes containing tandemly repeated DNA sequences. The THO complex is also part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1p, Tho2p, Thp1p, and Mft1p, while the human complex is composed of 7 subunits.","definition_xrefs":["GOC:krc","PMID:11979277","PMID:16983072","PMID:11060033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"THO complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000347","terms_by_termid":{"GO:0000445":null}}


id: FYPO:0002492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA 5'-adenosine monophosphate hydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"abolished DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"DNA 5'-adenosine monophosphate hydrolase activity abolished","type":"exact"}],"termid":"FYPO:0002492"}


id: GO:1900480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"regulation of diacylglycerol anabolism","type":"exact"},{"name":"regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"regulation of diacylglycerol formation","type":"exact"},{"name":"regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900480"}


id: FYECO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the duration or frequency of one or more steps in a protocol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth timing","termid":"FYECO:0000122"}


id: SO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point at which one or more contiguous nucleotides were excised.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion","secondary_identifiers":["SO:1000033","http://en.wikipedia.org/wiki/Nucleotide_deletion","loinc:LA6692-3"],"synonyms":[{"name":"deleted_sequence","type":"exact"},{"name":"nucleotide deletion","type":"exact"},{"name":"nucleotide_deletion","type":"exact"}],"termid":"SO:0000159"}


id: GO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of pain","termid":"GO:0051930"}


id: GO:0007398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm development","termid":"GO:0007398"}


id: PBO:0027188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_F-actin_level_in_actomyosin_contractile_ring_during_early_mitosis","termid":"PBO:0027188"}


id: PBO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNA4 pseudogene 1","termid":"PBO:0052597"}


id: GO:1905638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27122350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial RNA catabolic process","termid":"GO:0000961"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"negatively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"down regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"down-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"downregulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"inhibition of mitochondrial mRNA catabolic process","type":"narrow"}],"termid":"GO:1905638"}


id: GO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 22 (CCL22) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:18832724","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 22 production","synonyms":[{"name":"C-C motif chemokine 22 production","type":"exact"},{"name":"CCL-22 production","type":"exact"},{"name":"CCL22 production","type":"exact"}],"termid":"GO:0071924"}


id: PBO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki1","termid":"PBO:0004799"}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: PBO:0069607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: SO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 3' splice site has the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_three_prime_splice_site","synonyms":[{"name":"canonical 3' splice site","type":"exact"},{"name":"canonical three prime splice site","type":"exact"}],"termid":"SO:0000676"}


id: FYPO:0005717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during mitosis","synonyms":[{"name":"normal protein kinase activity during mitotic M phase","type":"related"},{"name":"normal protein kinase activity during mitotic M-phase","type":"related"}],"termid":"FYPO:0005717"}


id: MOD:00928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:16771548","Unimod:513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[3-(2,5)-dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","synonyms":[{"name":"C8-QAT","type":"related"},{"name":"[3-(2,5)-Dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","type":"related"}],"termid":"MOD:00928"}


id: PBO:0005658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28, Rps2802","termid":"PBO:0005658"}


id: PBO:0060502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 1","termid":"PBO:0060502"}


id: PBO:0074207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 40 member 1","termid":"PBO:0074207"}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_01177","SJAG_00434","SJAG_03334","SJAG_04162","SJAG_01960","SJAG_00276","SJAG_03452","SJAG_04325","SJAG_04406","SJAG_00612","SJAG_02050","SJAG_00339","SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[107009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[89473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[108369,89241,89475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[84561,108482,111653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: PBO:0082582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin associated high mobility group (HMG) family member; involved in compacting, bending, bridging and looping DNA; rDNA-binding component that regulates transcription from RNA polymerase I promoters; regulates start site selection of ribosomal protein genes via RNA polymerase II promoters; role in genome maintenance; associates with a 5'-3' DNA helicase and Fpr1p, a prolyl isomerase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082582"}


id: FYPO:0009111
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115148],"is_not":false,"summary":null,"term":"FYPO:0009111"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype that reflects increased occurrence of flocculation. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased flocculation during vegetative growth","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"termid":"FYPO:0009111","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null,"FYPO:0009111":null}}


id: PBO:0046728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin","termid":"PBO:0046728"}


id: GO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the pronephros.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification involved in pronephros development","termid":"GO:0034672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in pronephros anterior/posterior pattern specification","synonyms":[{"name":"retinoic acid receptor signaling pathway involved in pronephric kidney anterior/posterior pattern specification","type":"exact"},{"name":"retinoic acid receptor signalling pathway involved in pronephros anterior-posterior patterning","type":"exact"}],"termid":"GO:0034671"}


id: GO:0032425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mismatch repair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mismatch repair","termid":"GO:0032423"},{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"positively_regulates","term_name":"mismatch repair","termid":"GO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"positive regulation of mismatch repair","synonyms":[{"name":"activation of mismatch repair","type":"narrow"},{"name":"stimulation of mismatch repair","type":"narrow"},{"name":"up regulation of mismatch repair","type":"exact"},{"name":"up-regulation of mismatch repair","type":"exact"},{"name":"upregulation of mismatch repair","type":"exact"}],"termid":"GO:0032425"}


id: PBO:0068141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 448","termid":"PBO:0068141"}


id: GO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that increases the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of molecular function, epigenetic (obsolete GO:0045858)","synonyms":[{"name":"activation of protein activity, epigenetic","type":"narrow"},{"name":"positive regulation of protein activity, epigenetic","type":"exact"},{"name":"stimulation of protein activity, epigenetic","type":"narrow"},{"name":"up regulation of protein activity, epigenetic","type":"exact"},{"name":"up-regulation of protein activity, epigenetic","type":"exact"},{"name":"upregulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045858"}


id: PBO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL pseudogene 1","termid":"PBO:0042652"}


id: PBO:0109356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and putative heme transporter 2","termid":"PBO:0109356"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: GO:0000372
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94221],"is_not":false,"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","termid":"GO:0000376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group I intron splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000372","terms_by_termid":{"GO:0000372":null}}


id: PBO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_G2/M_phase_transition","termid":"PBO:0031799"}


id: FYPO:0001457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tunicamycin. Cells stop growing (and may die) at a concentration of tunicamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tunicamycin","synonyms":[{"name":"hypersensitive to tunicamycin","type":"exact"},{"name":"sensitive to tunicamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to tunicamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0001457"}


id: PBO:0083282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14","termid":"PBO:0083282"}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0074578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smad nuclear interacting protein 1","termid":"PBO:0074578"}


id: PBO:0083863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty acid elongase, involved in sphingolipid biosynthesis; acts on fatty acids of up to 24 carbons in length; mutations have regulatory effects on 1,3-beta-glucan synthase, vacuolar ATPase, and the secretory pathway; ELO2 has a paralog, ELO1, that arose from the whole genome duplication; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083863"}


id: PBO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase (predicted)","termid":"PBO:0002083"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: PBO:0014609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex corepressor nrm1","termid":"PBO:0014609"}


id: GO:1904302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GOC:TermGenie","PMID:1849751","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of maternal process involved in parturition","synonyms":[{"name":"down regulation of maternal process involved in parturition","type":"exact"},{"name":"down-regulation of maternal process involved in parturition","type":"exact"},{"name":"downregulation of maternal process involved in parturition","type":"exact"},{"name":"inhibition of maternal process involved in parturition","type":"narrow"}],"termid":"GO:1904302"}


id: PR:Q09782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23072:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.03","secondary_identifiers":["UniProtKB:Q09782"],"synonyms":[{"name":"SPAC13G6.03","type":"related"},{"name":"Spom972h-PIGG","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gpi7","type":"related"}],"termid":"PR:Q09782"}


id: GO:1901450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"positively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to butan-1-ol","synonyms":[{"name":"activation of response to butan-1-ol","type":"narrow"},{"name":"up regulation of response to butan-1-ol","type":"exact"},{"name":"up-regulation of response to butan-1-ol","type":"exact"},{"name":"upregulation of response to butan-1-ol","type":"exact"}],"termid":"GO:1901450"}


id: GO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"egg coat formation","termid":"GO:0035803"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"vitelline membrane formation","termid":"GO:0030704"}


id: GO:1990436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a MAP kinase cascade activated by oxidative stress relays one or more of the signals, MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase. Just FYI in pombe the osmotic stress and oxidative stress MAPK cascade involve many of the same proteins, but the pathways are slightly different, therefore Im req this term.","definition_xrefs":["PMID:10398679"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in oxidative stress signaling pathway (obsolete GO:1990436)","synonyms":[{"name":"MAPK cascade involved in oxidative stress signaling pathway","type":"exact"}],"termid":"GO:1990436"}


id: GO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the primitive palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive palate development","termid":"GO:0062010"}


id: PBO:0005045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec6","termid":"PBO:0005045"}


id: PBO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3B pseudogene","termid":"PBO:0062182"}


id: PBO:0029886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_stress_granule_disassembly","termid":"PBO:0029886"}


id: PBO:0062334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 73 pseudogene","termid":"PBO:0062334"}


id: PBO:0039588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 6","termid":"PBO:0039588"}


id: GO:1900733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"negatively_regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of polyketide biosynthetic process","synonyms":[{"name":"down regulation of polyketide anabolism","type":"exact"},{"name":"down regulation of polyketide biosynthesis","type":"exact"},{"name":"down regulation of polyketide biosynthetic process","type":"exact"},{"name":"down regulation of polyketide formation","type":"exact"},{"name":"down regulation of polyketide synthesis","type":"exact"},{"name":"down-regulation of polyketide anabolism","type":"exact"},{"name":"down-regulation of polyketide biosynthesis","type":"exact"},{"name":"down-regulation of polyketide biosynthetic process","type":"exact"},{"name":"down-regulation of polyketide formation","type":"exact"},{"name":"down-regulation of polyketide synthesis","type":"exact"},{"name":"downregulation of polyketide anabolism","type":"exact"},{"name":"downregulation of polyketide biosynthesis","type":"exact"},{"name":"downregulation of polyketide biosynthetic process","type":"exact"},{"name":"downregulation of polyketide formation","type":"exact"},{"name":"downregulation of polyketide synthesis","type":"exact"},{"name":"inhibition of polyketide anabolism","type":"exact"},{"name":"inhibition of polyketide biosynthesis","type":"exact"},{"name":"inhibition of polyketide biosynthetic process","type":"narrow"},{"name":"inhibition of polyketide formation","type":"exact"},{"name":"inhibition of polyketide synthesis","type":"exact"},{"name":"negative regulation of polyketide anabolism","type":"exact"},{"name":"negative regulation of polyketide biosynthesis","type":"exact"},{"name":"negative regulation of polyketide formation","type":"exact"},{"name":"negative regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900733"}


id: PR:O94405
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.13c gene.","definition_xrefs":["UniProtKB:O94405","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C126.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.13c","synonyms":[{"name":"Spom972h-SPCC126.13c","type":"exact"}],"termid":"PR:O94405"}


id: GO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-A subunits (sometimes known as activin beta-A or activin/inhibin beta-A).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activin A complex","secondary_identifiers":["GO:0048181"],"termid":"GO:0043509"}


id: PBO:0081823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 746","termid":"PBO:0081823"}


id: GO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"eugenol catabolic process","synonyms":[{"name":"eugenol catabolism","type":"exact"},{"name":"eugenol degradation","type":"exact"},{"name":"eugenol breakdown","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolism","type":"exact"},{"name":"eugenic acid catabolic process","type":"exact"},{"name":"eugenic acid catabolism","type":"exact"}],"termid":"GO:0042856"}


id: FYPO:0000850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to stress during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"resistance to stress during mitotic cell cycle","type":"related"},{"name":"resistant to stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000850"}


id: GO:0034926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrene-4,5-oxide + H2O = trans-4,5-dihydroxy-4,5-dihydropyrene.","definition_xrefs":["UM-BBD_reactionID:r0942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"pyrene-4,5-epoxide hydrolase activity","termid":"GO:0034926"}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: PBO:0048173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 2","termid":"PBO:0048173"}


id: PBO:0076682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 1","termid":"PBO:0076682"}


id: PBO:0028312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene","termid":"PBO:0028312"}


id: GO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + indolin-2-one + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-2-monooxygenase activity","secondary_identifiers":["EC:1.14.14.153","KEGG_REACTION:R07403"],"termid":"GO:0036190"}


id: SO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat that is located at dispersed sites in the genome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispersed_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Interspersed_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:dispersed","type":"exact"},{"name":"dispersed repeat","type":"exact"},{"name":"interspersed repeat","type":"exact"}],"termid":"SO:0000658"}


id: PBO:0068341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113A","termid":"PBO:0068341"}


id: PBO:0012583
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G Protein Beta gene","termid":"PBO:0012583"}


id: GO:0021934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell in the hindbrain in which cells move orthogonal to the direction of radial migration.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain tangential cell migration","synonyms":[{"name":"hindbrain neurophilic migration","type":"related"}],"termid":"GO:0021934"}


id: GO:0032874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"positive regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070304"},{"relation_name":"positively_regulates","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress-activated MAPK cascade","synonyms":[{"name":"activation of stress-activated MAPK cascade","type":"narrow"},{"name":"positive regulation of p38 MAPK signaling","type":"exact"},{"name":"positive regulation of p38 MAPK signalling","type":"exact"},{"name":"positive regulation of stress-activated MAPK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPK signalling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK cascade","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated MAPKKK signalling pathway","type":"exact"},{"name":"stimulation of stress-activated MAPK cascade","type":"narrow"},{"name":"up regulation of stress-activated MAPK cascade","type":"exact"},{"name":"up-regulation of stress-activated MAPK cascade","type":"exact"},{"name":"upregulation of stress-activated MAPK cascade","type":"exact"}],"termid":"GO:0032874"}


id: PBO:0053851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1120","termid":"PBO:0053851"}


id: GO:1902412
data:
  {"annotated_genes":["SJAG_03692","SJAG_00256","SJAG_01188","SJAG_02592","SJAG_03704","SJAG_01837","SJAG_03631","SJAG_03048","SJAG_04776","SJAG_00845","SJAG_01863","SJAG_01456","SJAG_02392","SJAG_04468","SJAG_03309","SJAG_04597","SJAG_01805","SJAG_01787","SJAG_04551","SJAG_03887","SJAG_03581","SJAG_00514","SJAG_04666","SJAG_01114","SJAG_03342","SJAG_05290","SJAG_02807","SJAG_04412","SJAG_02838","SJAG_02380","SJAG_00078","SJAG_03936","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83732,85984,86133,86173,87982,105328,109475,111557,112774,113588,114743,99613],"is_not":false,"summary":null,"term":"GO:1902412"},{"annotations":[98489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98490,98264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[86167,90544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[106636,83729,109472,90545,90713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[86168,89943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[91991,99824,106879,86930,115460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[86038,89944,109473,85415,102485,101279,103157,111556,113952,88560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88561,83730,90548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[115497,90510,89950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[97507,84052,107481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"regulates","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01456":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of cytokinesis after mitosis","type":"exact"}],"termid":"GO:1902412","terms_by_termid":{"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0014601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L21, fusion protein (predicted)","termid":"PBO:0014601"}


id: PBO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 3","termid":"PBO:0060179"}


id: PBO:0091265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans SFU1","termid":"PBO:0091265"}


id: PBO:0064508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit I","termid":"PBO:0064508"}


id: PBO:0064765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase G pseudogene 1","termid":"PBO:0064765"}


id: GO:0033594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyisoflavone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyisoflavone","termid":"GO:0033594"}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: GO:0051418
data:
  {"annotated_genes":["SJAG_00856","SJAG_02886","SJAG_02761","SJAG_07018","SJAG_02737","SJAG_01756","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[96201,102549,97106,113032,96506,113262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[114715,97107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the microtubule organizing center.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0065003","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule nucleation by microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by MTOC","type":"exact"},{"name":"microtubule nucleation by microtubule organising centre","type":"exact"},{"name":"microtubule organizing center-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051418","terms_by_termid":{"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah3","termid":"PBO:0005295"}


id: PBO:0054658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2064","termid":"PBO:0054658"}


id: MOD:00582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C,2x(15)N labeled L-lysine.","definition_xrefs":["OMSSA:181","PubMed:12716131","Unimod:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,2x(15)N labeled L-lysine","synonyms":[{"name":"13C(6) 15N(2) Silac label","type":"related"},{"name":"Label:13C(6)15N(2)","type":"related"},{"name":"lys-13C615N2","type":"exact"}],"termid":"MOD:00582"}


id: FYPO:0003918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"},{"relation_name":"is_a","term_name":"abolished nuclear mRNA catabolic process","termid":"FYPO:0003934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abolished nonsense-mediated decay","synonyms":[{"name":"abolished NMD","type":"exact"},{"name":"abolished nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"abolished nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"abolished nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated decay abolished","type":"exact"}],"termid":"FYPO:0003918"}


id: MOD:00421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a carbon with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"C-glycosylated residue","synonyms":[{"name":"CGlycoRes","type":"exact"}],"termid":"MOD:00421"}


id: GO:0075035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which specialized features of the symbiont appressorium are acquired post initiation, to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium maturation","synonyms":[{"name":"appressorium maturation on or near host","type":"exact"},{"name":"maturation of appressorium on or near host","type":"related"},{"name":"maturation of symbiont appressorium on or near host","type":"exact"}],"termid":"GO:0075035"}


id: PATO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Acyclic cyclicity inheres in a molecule when the atoms within the molecule do not contain at least one cycle in the atom-atom connection paths (through the bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyclic cyclicity","termid":"PATO:0002185"}


id: MOD:01653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride.","definition_xrefs":["Unimod:139","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dansyl chloride derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"},{"name":"DansylRes","type":"exact"}],"termid":"MOD:01653"}


id: PBO:0054975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2389","termid":"PBO:0054975"}


id: PBO:0028529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028529"}


id: GO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate metabolic process","synonyms":[{"name":"D-xylulose 5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose 5-phosphate metabolism","type":"exact"},{"name":"D-xylulose-5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose-5-phosphate metabolism","type":"exact"},{"name":"xylulose 5-phosphate metabolism","type":"exact"},{"name":"xylulose-5-phosphate metabolic process","type":"exact"},{"name":"xylulose-5-phosphate metabolism","type":"exact"}],"termid":"GO:0051167"}


id: PATO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotated","synonyms":[{"name":"rotation","type":"exact"}],"termid":"PATO:0001599"}


id: PBO:0071974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 2","termid":"PBO:0071974"}


id: GO:0052836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inositol 5-diphosphate pentakisphosphate = ADP + inositol 5-triphosphate pentakisphosphate.","definition_xrefs":["PMID:18355727","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol 5-diphosphate pentakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855224","Reactome:R-HSA-1855158"],"termid":"GO:0052836"}


id: GO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins, DNA, and RNA molecules to form a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein-DNA-RNA complex assembly","termid":"GO:0001116"}


id: PBO:0074047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A28 divergent transcript","termid":"PBO:0074047"}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: PBO:0070401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 like 1","termid":"PBO:0070401"}


id: GO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glycerol ether catabolic process","synonyms":[{"name":"glycerol ether breakdown","type":"exact"},{"name":"glycerol ether catabolism","type":"exact"},{"name":"glycerol ether degradation","type":"exact"}],"termid":"GO:0044269"}


id: PBO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh3 (predicted)","termid":"PBO:0005563"}


id: PBO:0027164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027164"}


id: GO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9) by promoting the nuclear accumulation of IRF9. For example, the reovirus mu2 protein promotes nuclear accumulation of host IRF9 by an as yet unconfirmed-mechanism.","definition_xrefs":["PMID:19109390"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus (obsolete GO:0039561)","synonyms":[{"name":"suppression by virus of host IRF9 activity by nuclear localization of IRF9","type":"related"},{"name":"suppression of interferon signaling by nuclear accumulation of IRF9","type":"related"}],"termid":"GO:0039561"}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: PBO:0029306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_G0","termid":"PBO:0029306"}


id: PBO:0012521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_of","termid":"PBO:0012521"}


id: SO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_ablation","termid":"SO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"TFBS ablation","type":"exact"},{"name":"VEP:TFBS_ablation","type":"exact"},{"name":"transcription factor binding site ablation","type":"exact"}],"termid":"SO:0001895"}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: GO:0070484
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydro-D-arabinono-1,4-lactone, the gamma-lactone (5R)-3,4-dihydroxy-5-(hydroxymethyl)furan-2(5H)-one.","definition_xrefs":["GOC:cjk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dehydro-D-arabinono-1,4-lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dehydro-D-arabinono-1,4-lactone metabolism","type":"exact"}],"termid":"GO:0070484","terms_by_termid":{"GO:0070485":null}}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: PBO:0084074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; activated by increased levels of glycolysis intermediate fructose-1,6-bisphosphate; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication","termid":"PBO:0084074"}


id: PBO:0047797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box H1","termid":"PBO:0047797"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: GO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ser bond in complement component C3 alpha-chain to form C3a and C3b, and Arg bond in complement component C5 alpha-chain to form C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete classical-complement-pathway C3/C5 convertase activity (obsolete GO:0003813)","synonyms":[{"name":"C3 convertase activity","type":"broad"},{"name":"C42","type":"related"},{"name":"C423","type":"related"},{"name":"C4b,2a","type":"related"},{"name":"C4b,2a,3b","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"classical-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"complement C2 activity","type":"broad"},{"name":"complement C3 convertase activity","type":"related"},{"name":"complement C42","type":"related"}],"termid":"GO:0003813"}


id: PBO:0026683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_at_low_temperature","termid":"PBO:0026683"}


id: PBO:0073638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 25, pseudogene","termid":"PBO:0073638"}


id: PBO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family","termid":"PBO:0004383"}


id: PBO:0028454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate","termid":"PBO:0028454"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: FYPO:0008106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell size during stationary phase","termid":"FYPO:0008106"}


id: PBO:0043360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 2","termid":"PBO:0043360"}


id: PBO:0091125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase Oms1","termid":"PBO:0091125"}


id: PATO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000567 absolute height value (obsolete PATO:0000567)","termid":"PATO:0000567"}


id: GO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["GOC:dh","PMID:20308541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"bacillithiol metabolic process","termid":"GO:0071792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"bacillithiol biosynthetic process","synonyms":[{"name":"bacillithiol anabolism","type":"exact"},{"name":"bacillithiol biosynthesis","type":"exact"},{"name":"bacillithiol formation","type":"exact"},{"name":"bacillithiol synthesis","type":"exact"}],"termid":"GO:0071793"}


id: PBO:0077814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 3","termid":"PBO:0077814"}


id: GO:0098622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + selenodiglutathione + NADPH = gluthathioselenol + glutathione + NADP+.","definition_xrefs":["PMID:1569062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0015036"],"is_obsolete":false,"name":"selenodiglutathione-disulfide reductase (NADPH) activity","secondary_identifiers":["RHEA:34927","Reactome:R-HSA-2408542"],"synonyms":[{"name":"selenodiglutathione-disulfide reductase (NADP) activity","type":"exact"},{"name":"selenodiglutathione-disulfide reductase activity","type":"broad"}],"termid":"GO:0098622"}


id: GO:0010798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a multivesicular body as part of the chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multivesicular body size","termid":"GO:0010796"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of multivesicular body size involved in ubiquitin-dependent protein catabolism","termid":"GO:0010798"}


id: GO:0005575
data:
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