# terms

id: GO:1903397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["PMID:23878277","GO_REF:0000058","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic division septum assembly","termid":"GO:0140281"},{"relation_name":"is_a","term_name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"},{"relation_name":"positively_regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0044085","GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary cell septum biogenesis","synonyms":[{"name":"activation of secondary cell septum biogenesis","type":"narrow"},{"name":"up regulation of secondary cell septum biogenesis","type":"exact"},{"name":"up-regulation of secondary cell septum biogenesis","type":"exact"},{"name":"upregulation of secondary cell septum biogenesis","type":"exact"}],"termid":"GO:1903397"}


id: GO:0048147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"negatively_regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast proliferation","synonyms":[{"name":"down regulation of fibroblast proliferation","type":"exact"},{"name":"down-regulation of fibroblast proliferation","type":"exact"},{"name":"downregulation of fibroblast proliferation","type":"exact"},{"name":"inhibition of fibroblast proliferation","type":"narrow"}],"termid":"GO:0048147"}


id: FYPO:0001256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to oxygen","termid":"FYPO:0001255"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hypoxia","termid":"FYPO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during cellular response to hypoxia","synonyms":[{"name":"increased protein accumulation during cellular response to hypoxia","type":"related"},{"name":"increased protein level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to increased oxygen tension","type":"exact"}],"termid":"FYPO:0001256"}


id: PBO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type zinc finger protein","termid":"PBO:0000152"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: SO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the rate of transcription with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription_variant","termid":"SO:0001549"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rate_of_transcription_variant","synonyms":[{"name":"rate of transcription variant","type":"exact"}],"termid":"SO:0001550"}


id: GO:0048074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"negatively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye pigmentation","synonyms":[{"name":"down regulation of eye pigmentation","type":"exact"},{"name":"down-regulation of eye pigmentation","type":"exact"},{"name":"downregulation of eye pigmentation","type":"exact"},{"name":"inhibition of eye pigmentation","type":"narrow"}],"termid":"GO:0048074"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: GO:1903050
data:
  {"annotated_genes":["SJAG_03048","SJAG_02485","SJAG_01489","SJAG_00071","SJAG_01544","SJAG_00712","SJAG_01131","SJAG_00475","SJAG_03699","SJAG_04477","SJAG_00766","SJAG_00642","SJAG_01210","SJAG_02723","SJAG_02244","SJAG_00052","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[86568,103058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[64821,66202,67381,67757,60833,66443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[107820,105008,113151,98504,102765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[95983,76559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061136"},{"annotations":[110722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proteolysis involved in cellular catabolic process.","definition_xrefs":["PMID:18307834","GOC:rl","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"regulates","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of proteolysis involved in protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"regulation of proteolysis involved in cellular protein catabolic process","type":"exact"}],"termid":"GO:1903050","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0061136":null,"GO:1901800":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0015696
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SSK1","termid":"PBO:0015696"}


id: GO:1903544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butyrate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9734870","GO_REF:0000071","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butyrate","termid":"GO:1903544"}


id: PBO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 10","termid":"PBO:0051655"}


id: GO:0033980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + 2 H+ = CO2 + phosphonoacetaldehyde.","definition_xrefs":["EC:4.1.1.82","RHEA:20768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04053","MetaCyc:4.1.1.82-RXN"],"synonyms":[{"name":"3-phosphonopyruvate carboxy-lyase (2-phosphonoacetaldehyde-forming) activity","type":"related"},{"name":"3-phosphonopyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0033980"}


id: GO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane involved in mitochondrial fission","synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane involved in mitochondrial fission","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane involved in mitochondrial fission","type":"exact"}],"termid":"GO:0090152"}


id: PBO:0030347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_smeared_DNA","termid":"PBO:0030347"}


id: CHEBI:84327
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torin 1","termid":"CHEBI:84327"}


id: PBO:0068707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 88, pseudogene","termid":"PBO:0068707"}


id: FYPO:0000987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a lower-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000987)","synonyms":[{"name":"decreased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"decreased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"decreased transcriptional response to pheromone","type":"related"},{"name":"reduced transcriptional response to pheromone at normal pheromone level","type":"exact"},{"name":"resistant to pheromone","type":"related"}],"termid":"FYPO:0000987"}


id: PBO:0080287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 51 pseudogene","termid":"PBO:0080287"}


id: PBO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isochromosome_formation","termid":"PBO:0030463"}


id: PR:O74543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large neutral amino acids transporter small subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C777.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.04","secondary_identifiers":["UniProtKB:O74543"],"synonyms":[{"name":"Spom972h-SLC7A8","type":"exact"}],"termid":"PR:O74543"}


id: PBO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor Phx1","termid":"PBO:0001555"}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: GO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + capsular polysaccharide(in) = ADP + phosphate + capsular polysaccharide(out).","definition_xrefs":["EC:7.6.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type capsular-polysaccharide transporter activity","secondary_identifiers":["MetaCyc:3.6.3.38-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (capsular-polysaccharide-exporting)","type":"related"},{"name":"ATP-dependent capsular-polysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled capsular-polysaccharide transporter activity","type":"related"},{"name":"capsular-polysaccharide ABC transporter","type":"narrow"},{"name":"capsular-polysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015436"}


id: GO:0140480
data:
  {"annotated_genes":["SJAG_04558","SJAG_03200","SJAG_02332","SJAG_05196","SJAG_01460","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86299,96718,98940,99579,107538,108948],"is_not":false,"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which the duplicated mitotic spindle pole body is inserted into a fenestra which opens in the nuclear envelope in early mitosis, and is subsequently tethered to the membrane.","definition_xrefs":["PMID:24529240","PMID:19487457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body localization","termid":"GO:1990608"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"mitotic spindle pole body insertion into the nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle pole body localisation in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization in nuclear envelope","type":"exact"},{"name":"establishment of spindle pole body localization to nuclear envelope","type":"exact"}],"termid":"GO:0140480","terms_by_termid":{"GO:0140480":null}}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["KEGG_REACTION:R05225","MetaCyc:R345-RXN"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: PBO:0076630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 X-linked","termid":"PBO:0076630"}


id: GO:0090110
data:
  {"annotated_genes":["SJAG_02539","SJAG_05344","SJAG_05345","SJAG_02349","SJAG_03153","SJAG_00072","SJAG_03558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70507,74088,89495,106321,108084,108821,112688],"is_not":false,"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.","definition_xrefs":["GOC:dph","GOC:lb","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"COPII-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPII coat-cargo complex assembly","type":"related"},{"name":"cargo loading into COPII vesicle","type":"exact"},{"name":"cargo loading into COPII-coated vesicle","type":"exact"},{"name":"cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:0090110","terms_by_termid":{"GO:0090110":null}}


id: PBO:0068925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 168, pseudogene","termid":"PBO:0068925"}


id: GO:1901975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerate is transported across a membrane.","definition_xrefs":["PMID:23382251","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycerate transmembrane transport","termid":"GO:1901975"}


id: PBO:0069356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 616, pseudogene","termid":"PBO:0069356"}


id: PBO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 1","termid":"PBO:0060876"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_03538","SJAG_02421","SJAG_04282","SJAG_00381","SJAG_00827","SJAG_02406","SJAG_02420","SJAG_04866","SJAG_04067","SJAG_01970","SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90424,95643,103490,109699,109705,110112,112114],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[85214,109792],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95646,106563,106564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: PBO:0027092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stably_decreased_rDNA_copy_number_during_vegetative_growth","termid":"PBO:0027092"}


id: PBO:0085417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in resistance to azole drugs such as ketoconazole and fluconazole","termid":"PBO:0085417"}


id: GO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of signal promoting sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade during sporulation (sensu Saccharomyces) (obsolete GO:0000202)","synonyms":[{"name":"MAPKKK cascade during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000202"}


id: PBO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0044557"}


id: PBO:0018279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3","termid":"PBO:0018279"}


id: PBO:0039875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP31 antisense RNA 1","termid":"PBO:0039875"}


id: FYPO:0007851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle assembly does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abolished spindle assembly during meiosis I","synonyms":[{"name":"abolished meiosis I spindle assembly","type":"exact"},{"name":"abolished spindle assembly during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007851"}


id: PBO:0079651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 U","termid":"PBO:0079651"}


id: GO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycotoxin","termid":"GO:0010046"}


id: FYPO:0003007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to caffeine is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to caffeine","synonyms":[{"name":"decreased protein accumulation during cellular response to caffeine","type":"related"},{"name":"decreased protein level during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003007"}


id: GO:0008090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"retrograde axonal transport","synonyms":[{"name":"retrograde axon cargo transport","type":"exact"}],"termid":"GO:0008090"}


id: GO:0060909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"part_of","term_name":"plasmid copy number maintenance","termid":"GO:0060908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}


id: GO:0044873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipoprotein is transported to, or maintained in, a specific location in a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein localization","termid":"GO:0044872"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipoprotein localization to membrane","termid":"GO:0044873"}


id: PBO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 15-1","termid":"PBO:0052915"}


id: PBO:0083664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum membrane protein; may facilitate protein-protein interactions between the Erg26p dehydrogenase and the Erg27p 3-ketoreductase and/or tether these enzymes to the ER, also interacts with Erg6p","termid":"PBO:0083664"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: GO:0061940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of c-di-GMP signaling.","definition_xrefs":["PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"regulates","term_name":"c-di-GMP signaling","termid":"GO:0061939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of c-di-GMP signaling","termid":"GO:0061940"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: PBO:0026762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV_during_mitotic_G1_phase","termid":"PBO:0026762"}


id: PBO:0109260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member C","termid":"PBO:0109260"}


id: PBO:0028970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_copper_ion_starvation","termid":"PBO:0028970"}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: MOD:00214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer dermatan 4-sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["RESID:AA0209","PubMed:2914936","PubMed:3472204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"beta-heparin","type":"exact"},{"name":"chondroitin sulfate B","type":"exact"},{"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-L-idopyranuronosyl-alpha-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00214"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: PBO:0057363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-1","termid":"PBO:0057363"}


id: PBO:0076867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14, intercellular bridge forming factor","termid":"PBO:0076867"}


id: SO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of polypeptide with a given structural property.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_structural_region","secondary_identifiers":["BS:00337"],"synonyms":[{"name":"polypeptide structural region","type":"exact"},{"name":"structural_region","type":"related"}],"termid":"SO:0001070"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: PATO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted","termid":"PATO:0001507"}


id: FYPO:0007656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at transcription start sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy at transcription start site","synonyms":[{"name":"increased nucleosome occupancy at TSS","type":"exact"},{"name":"increased nucleosome occupancy at transcription start site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at transcription start site during vegetative growth","type":"exact"}],"termid":"FYPO:0007656"}


id: PBO:0068397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216","termid":"PBO:0068397"}


id: PBO:0079223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3","termid":"PBO:0079223"}


id: PBO:0027140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_menadione","termid":"PBO:0027140"}


id: PBO:0078803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 20-1","termid":"PBO:0078803"}


id: PBO:0065556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 2","termid":"PBO:0065556"}


id: FYPO:0004217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me2 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 dimethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 dimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004217"}


id: PBO:0081278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 45","termid":"PBO:0081278"}


id: PBO:0067676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 861, pseudogene","termid":"PBO:0067676"}


id: GO:0006369
data:
  {"annotated_genes":["SJAG_03689","SJAG_02242","SJAG_03126","SJAG_03923","SJAG_04942","SJAG_03624","SJAG_02156","SJAG_01713","SJAG_04006","SJAG_04527","SJAG_03179","SJAG_02037"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72469,88968,93333,94274,95998,103814,103910,112082],"is_not":false,"summary":null,"term":"GO:0006369"},{"annotations":[108069],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[103574,93392,98291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript.","definition_xrefs":["GOC:mah","GOC:txnOH","PMID:27371117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_02037":null,"SJAG_02156":null,"SJAG_02242":null,"SJAG_03126":null,"SJAG_03179":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03923":null,"SJAG_04006":null,"SJAG_04527":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019224"],"synonyms":[{"name":"RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"RNA polymerase II transcription termination","type":"exact"},{"name":"RNA polymerase II transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol II promoter","type":"exact"},{"name":"transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006369","terms_by_termid":{"GO:0006369":null,"GO:0030847":null,"GO:1904595":null}}


id: PBO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_during","termid":"PBO:0006189"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109201],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: PBO:0061815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 5 Y-linked","termid":"PBO:0061815"}


id: PBO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 25","termid":"PBO:0072461"}


id: GO:0045254
data:
  {"annotated_genes":["SJAG_01402","SJAG_00866","SJAG_02006","SJAG_03290","SJAG_03064","SJAG_02158"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83618,91136,95154,104706,110337,114508],"is_not":false,"summary":null,"term":"GO:0045254"}]},"cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA. The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: pyruvate dehydrogenase (E1, which may be a homodimer or a heterotetramer of two alpha and two beta subunits, depending on species), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Additional proteins may also be present.","definition_xrefs":["PMID:36863425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoacid dehydrogenase complex","termid":"GO:0045240"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_03064":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyruvate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Pyruvate_dehydrogenase_complex","GO:0009364"],"synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"exact"}],"termid":"GO:0045254","terms_by_termid":{"GO:0045254":null}}


id: PBO:0063915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta","termid":"PBO:0063915"}


id: PBO:0073082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 2","termid":"PBO:0073082"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + reduced [NADPH--hemoprotein reductase] + O2 = (R)-menthofuran + 2 H2O + +H+ + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["KEGG_REACTION:R08923","EC:1.14.14.143","MetaCyc:1.14.13.104-RXN"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: FYPO:0001423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuolar transport","termid":"FYPO:0000601"},{"relation_name":"is_a","term_name":"normal protein localization to vacuole","termid":"FYPO:0007058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein targeting to vacuole","synonyms":[{"name":"normal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"normal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"normal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0001423"}


id: SO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in symbiosis, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiosis_island","synonyms":[{"name":"symbiosis island","type":"exact"}],"termid":"SO:0000776"}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: GO:1900595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-kotanin catabolic process","synonyms":[{"name":"(+)-kotanin breakdown","type":"exact"},{"name":"(+)-kotanin catabolism","type":"exact"},{"name":"(+)-kotanin degradation","type":"exact"}],"termid":"GO:1900595"}


id: GO:0043644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracycline, (4S,4aS,5aS,6S,12aS)-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, a broad-spectrum antibiotic produced by streptomyces bacteria that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:jl","Wikipedia:Tetracycline"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"tetracycline metabolic process","termid":"GO:0043643"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"tetracycline biosynthetic process","synonyms":[{"name":"tetracyclin biosynthesis","type":"exact"},{"name":"tetracyclin biosynthetic process","type":"exact"}],"termid":"GO:0043644"}


id: GO:0060424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the foregut into the area in which the lung will develop.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"foregut regionalization","termid":"GO:0060423"},{"relation_name":"part_of","term_name":"primary lung bud formation","termid":"GO:0060431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung field specification","synonyms":[{"name":"lung specification","type":"exact"}],"termid":"GO:0060424"}


id: PBO:0062566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AE member 3 pseudogene","termid":"PBO:0062566"}


id: PBO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DinB translesion DNA repair polymerase, pol kappa","termid":"PBO:0005072"}


id: PBO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs2 (predicted)","termid":"PBO:0017496"}


id: PBO:0066507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X4","termid":"PBO:0066507"}


id: GO:2000791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000791"}


id: GO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carotene + a reduced electron acceptor + O2 = C3-hydroxylated carotene + an oxidized electron acceptor + H2O. This is a general reaction to represent the C3 hydroxylation of the beta ring of a carotene.","definition_xrefs":["PMID:16492736","MetaCyc:MONOMER-12386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carotene beta-ring hydroxylase activity","secondary_identifiers":["GO:0042411"],"synonyms":[{"name":"beta-carotene hydroxylase activity","type":"narrow"}],"termid":"GO:0010291"}


id: PBO:0069643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 920, pseudogene","termid":"PBO:0069643"}


id: GO:0110114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","PMID:27365390","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of lipid transporter activity","termid":"GO:0110112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lipid transporter activity","termid":"GO:0110114"}


id: PBO:0039090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase","termid":"PBO:0039090"}


id: GO:0035335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"}


id: PBO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nyctalopin","termid":"PBO:0061754"}


id: PBO:0045431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L1 pseudogene 2","termid":"PBO:0045431"}


id: GO:0085012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Tat complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Tat complex (obsolete GO:0085012)","synonyms":[{"name":"interaction with host via protein secreted by Tat secretion system","type":"exact"}],"termid":"GO:0085012"}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: PBO:0083868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein component of an SCF ubiquitin-ligase complex; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCF(Grr1) complex; SCF(Grr1) acts as a ubiquitin-protein ligase directing ubiquitination of substrates such as: Gic2p, Mks1p, Mth1p, Cln1p, Cln2p and Cln3p; involved in carbon catabolite repression, glucose-dependent divalent cation transport, glucose transport, morphogenesis, and sulfite detoxification","termid":"PBO:0083868"}


id: GO:0034051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant-type hypersensitive response","synonyms":[{"name":"down regulation of plant-type hypersensitive response","type":"exact"},{"name":"down-regulation of plant-type hypersensitive response","type":"exact"},{"name":"downregulation of plant-type hypersensitive response","type":"exact"},{"name":"inhibition of plant-type hypersensitive response","type":"narrow"},{"name":"negative regulation of HR","type":"exact"},{"name":"negative regulation of HR-PCD","type":"exact"},{"name":"negative regulation of plant hypersensitive response","type":"exact"}],"termid":"GO:0034051"}


id: PBO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily U member 1","termid":"PBO:0052219"}


id: PBO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT midline carcinoma family member 1","termid":"PBO:0061714"}


id: PBO:0085613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex","termid":"PBO:0085613"}


id: GO:0035383
data:
  {"annotated_genes":["SJAG_02741","SJAG_01139","SJAG_04007","SJAG_01187","SJAG_03163","SJAG_04499","SJAG_02006","SJAG_00982","SJAG_02158","SJAG_03349","SJAG_03313","SJAG_04895","SJAG_03813","SJAG_02769","SJAG_03471","SJAG_02380","SJAG_01989","SJAG_03909","SJAG_03064","SJAG_03731","SJAG_01402","SJAG_03290","SJAG_01474","SJAG_00947","SJAG_00866","SJAG_03715","SJAG_04865","SJAG_00902","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89386,94512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[110338,114509,95155,104707,91137,83619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[87582,94176,110444,111847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[104826,92954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[90578,92728,110998,84887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[108176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[103585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[101702,109528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107477,111565],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[86083,111065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["GOC:bf","Wikipedia:Thioester"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thioester metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thioester metabolism","type":"exact"}],"termid":"GO:0035383","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0019287":null,"GO:0019427":null,"GO:0033512":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: SO:1000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When no simple or well defined DNA mutation event describes the observed DNA change, the keyword \\\"complex\\\" should be used. Usually there are multiple equally plausible explanations for the change.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_substitution","synonyms":[{"name":"complex substitution","type":"exact"}],"termid":"SO:1000005"}


id: GO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole acetic acid + S-adenosyl-methionine = methyl indole acetic acid ester + S-adenosyl-homocysteine.","definition_xrefs":["PMID:16169896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"indole acetic acid carboxyl methyltransferase activity","synonyms":[{"name":"IAA carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0051749"}


id: GO:0006987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of a specific protein, possessing protein kinase and endoribonuclease activities, to an active form as a result of signaling via the unfolded protein response.","definition_xrefs":["GOC:mah","PMID:12042763","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of signaling protein activity involved in unfolded protein response (obsolete GO:0006987)","synonyms":[{"name":"unfolded protein response, activation of signaling protein activity","type":"exact"},{"name":"unfolded protein response, activation of signaling protein kinase/endonuclease","type":"exact"},{"name":"unfolded protein response, activation of signalling protein kinase/endonuclease","type":"exact"}],"termid":"GO:0006987"}


id: GO:0008563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + alpha-factor(in) = ADP + phosphate + alpha-factor(out). The export of the alpha-factor sex pheromone by an ABC-type (ATP-binding cassette-type) ATPase, characterized by the presence of two similar ATP-binding domains, that does not undergo phosphorylation during the transport process.","definition_xrefs":["EC:3.6.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor sex pheromone exporter (obsolete GO:0008563)","synonyms":[{"name":"alpha-factor sex pheromone exporter","type":"exact"},{"name":"alpha-factor-transporting ATPase","type":"related"}],"termid":"GO:0008563"}


id: PBO:0030435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methyltransferase_activity","termid":"PBO:0030435"}


id: FYPO:0007352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 1.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"normal homologous chromosome pairing at omt3 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"}],"termid":"FYPO:0007352"}


id: PBO:0005144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase subunit Mus81","termid":"PBO:0005144"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: GO:0045917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of humoral immune response","termid":"GO:0002922"},{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"positively_regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation","synonyms":[{"name":"activation of complement activation","type":"narrow"},{"name":"positive regulation of complement cascade","type":"exact"},{"name":"stimulation of complement activation","type":"narrow"},{"name":"up regulation of complement activation","type":"exact"},{"name":"up-regulation of complement activation","type":"exact"},{"name":"upregulation of complement activation","type":"exact"}],"termid":"GO:0045917"}


id: PBO:0082228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, Ub-ligase adaptor for Rsp5p; controls nutrient limitation-mediated endosomal recycling of the Gap1p amino acid permease; PY motif-containing adaptor involved in substrate-induced, Rsp5p-mediated ubiquitination and endocytosis of select plasma membrane localized amino acid transporters, such as Dip5p and Put4p; phosphorylated by Npr1p and by the Pcl7p-Pho85p cyclin-CDK complex; interacts with AP-1 subunit Apl4p","termid":"PBO:0082228"}


id: PBO:0080570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 2","termid":"PBO:0080570"}


id: PBO:0084770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; member of the mitochondrial carrier subfamily (see also YIA6); has putative human ortholog; YEA6 has a paralog, YIA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YEA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084770"}


id: PBO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 2","termid":"PBO:0043800"}


id: GO:0140464
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87491],"is_not":false,"summary":null,"term":"GO:0140464"}]},"cv_name":"biological_process","definition":"The localization of silent mating-type cassette heterochromatin at a specific location in the nucleus.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"subnuclear spatial organization of silent mating-type cassette heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"silent mating-type cassette heterochromatin organization","type":"related"},{"name":"silent mating-type cassette heterochromatin spatial organization in the nucleus","type":"exact"}],"termid":"GO:0140464","terms_by_termid":{"GO:0140464":null}}


id: PBO:0060261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloma overexpressed","termid":"PBO:0060261"}


id: PBO:0088420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh3","termid":"PBO:0088420"}


id: GO:0035878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nail over time, from its formation to the mature structure. A nail is a horn-like envelope covering the outer end of a finger or toe, and consists of the nail plate, the nail matrix and the nail bed below it, and the grooves surrounding it.","definition_xrefs":["Wikipedia:Nail_(anatomy)","GOC:bf","ISBN:0323025781","UBERON:0001705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nail development","termid":"GO:0035878"}


id: MOD:00857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaninium (protonated L-alanine) residue to an N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:332162","PubMed:6778808","PubMed:7715456","Unimod:37#A","PubMed:3979397","PubMed:12590383"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine (from L-alaninium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:00857"}


id: PBO:0090940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase complex and tRNA (m2G10) methyltransferase complex regulatory subunit Trm112","termid":"PBO:0090940"}


id: GO:0032087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type IV restriction enzyme regulator","type":"related"}],"termid":"GO:0032087"}


id: GO:1905262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["PMID:26653857","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic DNA double-strand break formation","termid":"GO:1903342"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0006259","GO:0008150","GO:0007049","GO:0006310"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"}],"termid":"GO:1905262"}


id: PBO:0083833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A","termid":"PBO:0083833"}


id: PBO:0077565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 271","termid":"PBO:0077565"}


id: PBO:0062569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AH member 1 pseudogene","termid":"PBO:0062569"}


id: GO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an ephrin receptor ligand to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0004672","GO:0003674","GO:0140096","GO:0038023"],"is_obsolete":false,"name":"ephrin receptor activity","synonyms":[{"name":"Eph receptor activity","type":"exact"}],"termid":"GO:0005003"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_02100","SJAG_01036","SJAG_02487","SJAG_02907","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86283,88038,90064,90178,110889],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.","definition_xrefs":["EC:3.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"triglyceride lipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8848338","Reactome:R-HSA-8848339","RHEA:12044","Reactome:R-HSA-1482777","Reactome:R-HSA-163551","MetaCyc:TRIACYLGLYCEROL-LIPASE-RXN","Reactome:R-HSA-5694109"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"triacylglycerol lipase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: GO:1903995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:TermGenie","PMID:10518561","GOC:BHF","GO_REF:0000059","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of non-membrane spanning protein tyrosine kinase activity","synonyms":[{"name":"regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"regulation of ATP:protein-tyrosine O-phosphotransferase activity","type":"broad"},{"name":"regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"regulation of focal adhesion kinase activity","type":"narrow"},{"name":"regulation of janus kinase 1 activity","type":"narrow"},{"name":"regulation of janus kinase 2 activity","type":"narrow"},{"name":"regulation of janus kinase 3 activity","type":"narrow"},{"name":"regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903995"}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: GO:0060712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the spongiotrophoblast layer of the placenta progresses from its formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast layer development","termid":"GO:0060712"}


id: GO:0009977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of proteins from one side of a membrane to the other. Transportation is dependent on pH gradient across the membrane.","definition_xrefs":["PMID:25494301","PMID:11526245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0140318","GO:0005215"],"is_obsolete":false,"name":"proton motive force dependent protein transmembrane transporter activity","secondary_identifiers":["GO:0015557"],"synonyms":[{"name":"arginine targeting transmembrane transporter activity","type":"exact"},{"name":"delta-pH-dependent protein transporter activity","type":"exact"},{"name":"pH-dependent protein transporter activity","type":"exact"},{"name":"twin-arginine targeting transmembrane transporter activity","type":"exact"}],"termid":"GO:0009977"}


id: GO:0046128
data:
  {"annotated_genes":["SJAG_01070","SJAG_00044","SJAG_03881","SJAG_00134","SJAG_02582","SJAG_02959","SJAG_03096","SJAG_01859","SJAG_06634","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83779,83778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[109814,109815,86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[112929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[89897,85946,111931,89675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside metabolism","type":"exact"}],"termid":"GO:0046128","terms_by_termid":{"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046085":null,"GO:0046086":null}}


id: GO:0018952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.","definition_xrefs":["UM-BBD_pathwayID:pthn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"parathion metabolic process","synonyms":[{"name":"parathion metabolism","type":"exact"}],"termid":"GO:0018952"}


id: PBO:0005622
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimer","termid":"PBO:0005622"}


id: FYPO:0003654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cysteine synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"abolished cysteine synthase activity","synonyms":[{"name":"cysteine synthase activity abolished","type":"exact"}],"termid":"FYPO:0003654"}


id: GO:0003848
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101043],"is_not":false,"summary":null,"term":"GO:0003848"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:11412","EC:2.7.6.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03503","MetaCyc:H2PTERIDINEPYROPHOSPHOKIN-RXN"],"synonyms":[{"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase activity","type":"exact"},{"name":"6-hydroxymethyl-7,8-dihydropterin diphosphokinase activity","type":"related"},{"name":"6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin diphosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydroxymethylpterin-pyrophosphokinase activity","type":"related"},{"name":"ATP:2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine 6'-diphosphotransferase activity","type":"related"},{"name":"H2-pteridine-CH2OH pyrophosphokinase activity","type":"related"},{"name":"HPPK","type":"related"},{"name":"hydroxymethyldihydropteridine pyrophosphokinase activity","type":"related"}],"termid":"GO:0003848","terms_by_termid":{"GO:0003848":null}}


id: PBO:0041614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdk5 and Abl enzyme substrate 2","termid":"PBO:0041614"}


id: PBO:0083807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that interacts with proteasome components; has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles","termid":"PBO:0083807"}


id: PBO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 19","termid":"PBO:0075207"}


id: GO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate.","definition_xrefs":["GOC:dph","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061679"}


id: GO:0071676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"negatively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mononuclear cell migration","synonyms":[{"name":"down regulation of mononuclear cell migration","type":"exact"},{"name":"down-regulation of mononuclear cell migration","type":"exact"},{"name":"downregulation of mononuclear cell migration","type":"exact"},{"name":"inhibition of mononuclear cell migration","type":"narrow"}],"termid":"GO:0071676"}


id: FYPO:0005490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to vacuole","synonyms":[{"name":"abnormal protein localisation to vacuole","type":"exact"},{"name":"abnormal protein localization in vacuole","type":"exact"},{"name":"abnormal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005490"}


id: PBO:0067431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 552, pseudogene","termid":"PBO:0067431"}


id: PBO:0069715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 995, pseudogene","termid":"PBO:0069715"}


id: PBO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10B","termid":"PBO:0047420"}


id: GO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516","PMID:10811835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA3-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071058"}


id: GO:1905461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","PMID:26493107","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell apoptotic process","termid":"GO:0034393"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"activation of VSMC apoptosis","type":"narrow"},{"name":"activation of VSMC apoptotic process","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"positive regulation of VSMC apoptosis","type":"narrow"},{"name":"positive regulation of VSMC apoptotic process","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of VSMC apoptosis","type":"narrow"},{"name":"up regulation of VSMC apoptotic process","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of VSMC apoptosis","type":"narrow"},{"name":"up-regulation of VSMC apoptotic process","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of VSMC apoptosis","type":"narrow"},{"name":"upregulation of VSMC apoptotic process","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905461"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah","PMID:14511667","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"has_part","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0006551","FYPO:0000032","FYPO:0000138","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: PBO:0029666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0029666"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: PBO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 18","termid":"PBO:0070277"}


id: PBO:0087658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS and the CORVET complexes; part of the Class C Vps complex essential for membrane docking and fusion at Golgi-to-endosome and endosome-to-vacuole protein transport stages","termid":"PBO:0087658"}


id: GO:0003896
data:
  {"annotated_genes":["SJAG_04994","SJAG_02627","SJAG_00399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95539,99080,101434],"is_not":false,"summary":null,"term":"GO:0003896"}]},"cv_name":"molecular_function","definition":"Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:38203225","GOC:mcc","GOC:mah","PMID:26184436","PMID:38492718","PMID:11395402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00399":null,"SJAG_02627":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"DNA primase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003897","GO:0003898"],"termid":"GO:0003896","terms_by_termid":{"GO:0003896":null}}


id: GO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of a trichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast fate specification","termid":"GO:0010057"}


id: GO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sorocarp stalk cell, any of the cellulose-covered cells that form the stalk of a sorocarp. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:4338436","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk cell differentiation","synonyms":[{"name":"stalk cell differentiation","type":"exact"}],"termid":"GO:0031149"}


id: GO:0007030
data:
  {"annotated_genes":["SJAG_04023","SJAG_04598","SJAG_01003","SJAG_00357","SJAG_00284","SJAG_00578","SJAG_01633","SJAG_04196","SJAG_01467","SJAG_03270","SJAG_03670","SJAG_01516","SJAG_01571","SJAG_04528","SJAG_00557","SJAG_02120","SJAG_01459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86443,88253,90394,91655,92774,92835,94842,98301,99587,100395,105616,112437,114852],"is_not":false,"summary":null,"term":"GO:0007030"},{"annotations":[105927,104144,91695,113688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_01003":null,"SJAG_01459":null,"SJAG_01467":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_02120":null,"SJAG_03270":null,"SJAG_03670":null,"SJAG_04023":null,"SJAG_04196":null,"SJAG_04528":null,"SJAG_04598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi apparatus organization","type":"exact"},{"name":"Golgi organisation","type":"exact"},{"name":"Golgi organization and biogenesis","type":"related"}],"termid":"GO:0007030","terms_by_termid":{"GO:0007030":null,"GO:0048280":null}}


id: PR:P79063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic peptide chain release factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10113:SF1","PRO:DNx","OMA:SCHPO01942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.01","secondary_identifiers":["UniProtKB:P79063"],"synonyms":[{"name":"Spom972h-ETF1","type":"exact"},{"name":"eRF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic release factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79063"}


id: PBO:0041209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 1","termid":"PBO:0041209"}


id: PBO:0109992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like, unknown biological role","termid":"PBO:0109992"}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: GO:0099188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}


id: PBO:0078184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 1 (pseudogene)","termid":"PBO:0078184"}


id: PATO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000239 blinking reflex (obsolete PATO:0000239)","termid":"PATO:0000239"}


id: RO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a diminishes the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_negatively_regulates_activity_of","termid":"RO:0002449"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"represses_expression_of","termid":"RO:0003002"}


id: PBO:0038410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of_part_of","termid":"PBO:0038410"}


id: GO:0032176
data:
  {"annotated_genes":["SJAG_00118","SJAG_03374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97081,97886],"is_not":false,"summary":null,"term":"GO:0032176"}]},"cv_name":"cellular_component","definition":"A pair of rings that flank the site of cell division, formed by splitting of the septin ring (or collar) prior to cytokinesis; this double ring structure is thought to trap proteins needed for cytokinesis or the formation of the new membrane or cell wall between the two septin rings. Split septin rings are known to occur in budding yeast cells and probably occur in other cell types as well.","definition_xrefs":["PMID:16009555","PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_03374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"split septin rings","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032176","terms_by_termid":{"GO:0032176":null}}


id: FYPO:0002838
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002838","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0070048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Stx1a, Snap25, Vamp8)","type":"narrow"},{"name":"Stx1a-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070048"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: PBO:0089019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup132","termid":"PBO:0089019"}


id: GO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any DNA binding that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by DNA binding (obsolete GO:0100060)","termid":"GO:0100060"}


id: GO:0032656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-13 production","secondary_identifiers":["GO:2000665","GO:0045366"],"synonyms":[{"name":"regulation of IL-13 production","type":"exact"},{"name":"regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032656"}


id: PBO:0049063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 78","termid":"PBO:0049063"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: GO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroquinone + O2 = cis,trans-4-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroquinone 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018569"}


id: PBO:0034634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore_and_normal_chromosome_separation","termid":"PBO:0034634"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: PBO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 22","termid":"PBO:0070281"}


id: GO:0045129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction does not require the presence of NAD, and represents the removal of an acetyl group from a histone.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0019213","GO:0033558","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"NAD-independent histone deacetylase activity","synonyms":[{"name":"AcuC","type":"related"}],"termid":"GO:0045129"}


id: PBO:0080749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 5","termid":"PBO:0080749"}


id: FYPO:0004348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on methylglyoxal","synonyms":[{"name":"normal cell population growth in presence of methylglyoxal","type":"exact"},{"name":"normal cell population growth on methylglyoxal","type":"exact"},{"name":"normal cellular response to methylglyoxal","type":"related"},{"name":"normal vegetative cell population growth on methylglyoxal","type":"exact"}],"termid":"FYPO:0004348"}


id: PBO:0083723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 100kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion","termid":"PBO:0083723"}


id: GO:0030286
data:
  {"annotated_genes":["SJAG_00113","SJAG_01370","SJAG_01662","SJAG_02561","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87140,107504,83949,93706,96841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"}]},"cv_name":"cellular_component","definition":"Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_01370":null,"SJAG_01662":null,"SJAG_02286":null,"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"dynein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030286","terms_by_termid":{"GO:0005868":null}}


id: GO:2000395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquitin-dependent endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"ubiquitin-dependent endocytosis","termid":"GO:0070086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of ubiquitin-dependent endocytosis","synonyms":[{"name":"regulation of ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:2000395"}


id: PBO:0084793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for respiratory growth under some conditions and for stability of the mitochondrial genome; subunit of a complex containing Mrx6p, Pim1p, and Mam33p that may regulate mtDNA replication","termid":"PBO:0084793"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0004925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase (predicted)","termid":"PBO:0004925"}


id: PBO:0041060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9 pseudogene 2","termid":"PBO:0041060"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PATO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acceleration","termid":"PATO:0001028"}


id: MOD:00034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.","definition_xrefs":["PubMed:2001356","PubMed:2076469","RESID:AA0025#CYS2","ChEBI:16283","DeltaMass:0","PubMed:1988019","PubMed:8344916","PubMed:3083866","PubMed:7918467","PubMed:366603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine (cross-link)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"DISULFID","type":"exact"},{"name":"DISULFID Interchain","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"XLNK-SCys-SCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00034"}


id: PBO:0030034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_leptomycin_B_binding","termid":"PBO:0030034"}


id: PR:Q9USY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04003","PANTHER:PTHR21373:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase, 35 NatC auxiliary subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.03","secondary_identifiers":["UniProtKB:Q9USY3"],"synonyms":[{"name":"N-terminal acetyltransferase C complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA35","type":"exact"}],"termid":"PR:Q9USY3"}


id: PBO:0028153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_centromere_outer_repeat","termid":"PBO:0028153"}


id: GO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["PMID:21106844","GOC:PARL","CL:0000850","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of serotonergic neuron axon","synonyms":[{"name":"chemoattraction of 5-HT axon","type":"exact"},{"name":"chemoattraction of serotonergic axon","type":"exact"}],"termid":"GO:0036517"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: PBO:0025460
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutaric aciduria","termid":"PBO:0025460"}


id: PBO:0079192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 21, pseudogene","termid":"PBO:0079192"}


id: GO:0009887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["ISBN:0721662544","ISBN:0471245208","GOC:go_curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ morphogenesis","synonyms":[{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009887"}


id: PBO:0054224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1606","termid":"PBO:0054224"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: PBO:0087070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L34B; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34B has a paralog, RPL34A, that arose from the whole genome duplication","termid":"PBO:0087070"}


id: PBO:0089921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLYK family kinase of unknown specificity, implicated in nucleotide metabolism","termid":"PBO:0089921"}


id: PBO:0054763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2175","termid":"PBO:0054763"}


id: PBO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 2","termid":"PBO:0061735"}


id: PBO:0091917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase, translational elongation factor eEF1","termid":"PBO:0091917"}


id: GO:0043785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-phenyllactate + [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonatooxy)oxolan-2-yl]methyl {[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-{[(2E)-3-phenylprop-2-enoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)propyl phosphonato]oxy}phosphonate = (R)-3-phenyllactoyl-CoA + trans-cinnamate.","definition_xrefs":["EC:2.8.3.17","RHEA:15601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cinnamoyl-CoA:phenyllactate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.17-RXN","KEGG_REACTION:R07796"],"synonyms":[{"name":"(E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase activity","type":"exact"},{"name":"FldA","type":"related"}],"termid":"GO:0043785"}


id: PBO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 1","termid":"PBO:0048801"}


id: PBO:0051361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-11","termid":"PBO:0051361"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: PBO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 2","termid":"PBO:0051394"}


id: PATO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved ventral","synonyms":[{"name":"curved anterior (human torso)","type":"exact"},{"name":"curved inferior (human head)","type":"exact"}],"termid":"PATO:0001469"}


id: PBO:0048920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member Q","termid":"PBO:0048920"}


id: GO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the flower are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower morphogenesis","secondary_identifiers":["GO:0048411"],"termid":"GO:0048439"}


id: PBO:0057439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 556","termid":"PBO:0057439"}


id: GO:0004353
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTAMATE-SYN2-PWY","Reactome:R-HSA-70600","MetaCyc:GLUTAMATE-DEHYDROGENASE-NADP+-RXN","Reactome:R-HSA-70589"],"synonyms":[{"name":"L-glutamate:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004353","terms_by_termid":{"GO:0004354":null}}


id: PBO:0068007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 309","termid":"PBO:0068007"}


id: GO:0150141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"negatively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD86 production","synonyms":[{"name":"negative regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150141"}


id: PBO:0056132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 1","termid":"PBO:0056132"}


id: PR:P87115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA cytidine acetyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10925:SF5","PRO:DNx","OMA:SCHPO00570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA cytidine acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.09c","secondary_identifiers":["UniProtKB:P87115"],"synonyms":[{"name":"18S rRNA cytosine acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAT10","type":"exact"}],"termid":"PR:P87115"}


id: PBO:0083176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL07R","termid":"PBO:0083176"}


id: GO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cytoskeleton reorganization (obsolete GO:0031532)","synonyms":[{"name":"actin cytoskeleton remodeling","type":"exact"},{"name":"actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:0031532"}


id: PBO:0078923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-2","termid":"PBO:0078923"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PBO:0087957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane osmosensor for filamentous growth and HOG pathways; involved in activation of the Cdc42p- and MAP kinase-dependent filamentous growth pathway and the high-osmolarity glycerol (HOG) response pathway; phosphorylated by Hog1p; interacts with Pbs2p, Msb2p, Hkr1p, and Ste11p","termid":"PBO:0087957"}


id: SO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved sequence (5'-CGNMGATCNTY-3') transcription repressor binding site required for gene repression in the presence of high zinc.","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc_repressed_element","termid":"SO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOZ1_response_element","synonyms":[{"name":"Loz1 response element","type":"related"},{"name":"LRE","type":"related"},{"name":"LRE element","type":"related"}],"termid":"SO:0002225"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["CL:0000737","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: GO:0042135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter catabolic process (obsolete GO:0042135)","synonyms":[{"name":"neurotransmitter breakdown","type":"exact"},{"name":"neurotransmitter catabolism","type":"exact"},{"name":"neurotransmitter degradation","type":"exact"}],"termid":"GO:0042135"}


id: FYPO:0000159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome condensation is abnormal. Chromosome condensation is the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division.","definition_xrefs":["PomBase:mah","GO:0030261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome condensation","secondary_identifiers":["FYPO:0000028"],"synonyms":[{"name":"chromosome condensation defects","type":"exact"}],"termid":"FYPO:0000159"}


id: GO:0030808
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide anabolism","type":"exact"},{"name":"regulation of nucleotide biosynthesis","type":"exact"},{"name":"regulation of nucleotide formation","type":"exact"},{"name":"regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030808","terms_by_termid":{"GO:1905706":null}}


id: PBO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 14","termid":"PBO:0071355"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: PATO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased behavioural activity","synonyms":[{"name":"hyperactive","type":"exact"}],"termid":"PATO:0000760"}


id: PBO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 OG-Fe(II) oxygenase superfamily protein Ofd2","termid":"PBO:0002919"}


id: GO:0009846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a heterosporous plant pollen grain, beginning with hydration and terminating with the emergence of the pollen tube through the aperture.","definition_xrefs":["ISBN:0943088399","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen germination","termid":"GO:0009846"}


id: SO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-synonymous variant is an inframe, protein altering variant, resulting in a codon change.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsynonymous_variant","synonyms":[{"name":"non_synonymous_coding","type":"exact"},{"name":"nonsynonymous variant","type":"exact"}],"termid":"SO:0001992"}


id: PBO:0043412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 1","termid":"PBO:0043412"}


id: PBO:0041224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 21","termid":"PBO:0041224"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: GO:0036376
data:
  {"annotated_genes":["SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92877],"is_not":false,"summary":null,"term":"GO:0036376"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:14674689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01541":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sodium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098667","GO:0071436"],"synonyms":[{"name":"sodium export","type":"related"},{"name":"sodium ion export","type":"related"},{"name":"sodium ion export from cell","type":"exact"}],"termid":"GO:0036376","terms_by_termid":{"GO:0036376":null}}


id: PBO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICMT divergent transcript","termid":"PBO:0050859"}


id: FYPO:0003614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable meiotic spindle during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle absent from cell during meiosis","termid":"FYPO:0006391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000120","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic spindle absent from cell during meiosis II","synonyms":[{"name":"absent meiotic spindle during meiosis II","type":"exact"},{"name":"meiosis II spindle absent","type":"exact"},{"name":"meiotic spindle absent from cell during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003614"}


id: PBO:0086582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is viable and has no detectable phenotype","termid":"PBO:0086582"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["PMID:23826995","GOC:TermGenie","GO_REF:0000071","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PBO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 3","termid":"PBO:0043443"}


id: GO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric pyramids over time, from their formation to the mature structures. Metanephric pyramids are the conical masses that constitute the renal medulla in a metanephros; they contain the loops of Henle and the medullary collecting ducts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramid development","termid":"GO:0072056"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric pyramids development","synonyms":[{"name":"metanephric kidney pyramid development","type":"exact"},{"name":"metanephric pyramid development","type":"exact"},{"name":"metanephric renal medulla development","type":"exact"},{"name":"metanephric renal pyramid development","type":"exact"}],"termid":"GO:0072211"}


id: PBO:0028681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_attachment_of_spindle_microtubules_to_kinetochore","termid":"PBO:0028681"}


id: PBO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn1","termid":"PBO:0004780"}


id: GO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a multivesicular body as part of the directed movement of substances from endosomes to lysosomes or vacuoles.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multivesicular body size","termid":"GO:0010796"},{"relation_name":"part_of","term_name":"endosome transport via multivesicular body sorting pathway","termid":"GO:0032509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of multivesicular body size involved in endosome transport","termid":"GO:0010797"}


id: PBO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of the Chronological Lifespan","termid":"PBO:0003407"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: GO:0055079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of aluminum ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete aluminum ion homeostasis (obsolete GO:0055079)","synonyms":[{"name":"aluminium ion homeostasis","type":"exact"}],"termid":"GO:0055079"}


id: FYPO:0007731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of genes","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of genes","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of genes","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of genes during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at 3' end of genes during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin downstream of genes","type":"exact"}],"termid":"FYPO:0007731"}


id: PBO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase involved in genome maintenance Pgp1","termid":"PBO:0005380"}


id: FYPO:0003585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is decreased.","definition_xrefs":["GO:0031145","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"decreased anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased anaphase-promoting complex-dependent protein degradation","type":"exact"},{"name":"reduced anaphase-promoting complex-dependent protein catabolic process","type":"exact"}],"termid":"FYPO:0003585"}


id: PBO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like and fibronectin type III domain containing 1","termid":"PBO:0051038"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: PBO:0059945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 31","termid":"PBO:0059945"}


id: GO:1903852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cristae formation.","definition_xrefs":["GOC:pad","GOC:PARL","PMID:19279012","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"positively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cristae formation","synonyms":[{"name":"activation of cristae formation","type":"narrow"},{"name":"up regulation of cristae formation","type":"exact"},{"name":"up-regulation of cristae formation","type":"exact"},{"name":"upregulation of cristae formation","type":"exact"}],"termid":"GO:1903852"}


id: SO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An episome that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"},{"relation_name":"is_a","term_name":"episome","termid":"SO:0000768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_episome","synonyms":[{"name":"engineered episome","type":"exact"}],"termid":"SO:0000779"}


id: GO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the innate immune response that takes place in the mucosal tissues.","definition_xrefs":["GOC:add","PMID:10719665","PMID:15971105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal immune response","termid":"GO:0002385"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response in mucosa","termid":"GO:0002227"}


id: PBO:0090908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi serine carboxypeptidase","termid":"PBO:0090908"}


id: PBO:0083871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; required for turnover of histone H3 variant Cse4p","termid":"PBO:0083871"}


id: PBO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (predicted)","termid":"PBO:0005191"}


id: PBO:0040142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 5","termid":"PBO:0040142"}


id: PBO:0088800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling","termid":"PBO:0088800"}


id: PBO:0060928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofascin","termid":"PBO:0060928"}


id: PBO:0058862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9500","termid":"PBO:0058862"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: SO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_C_cluster","synonyms":[{"name":"V D DJ J C cluster","type":"exact"},{"name":"V-D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000529"}


id: PBO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 4 (pseudogene)","termid":"PBO:0043978"}


id: GO:0008088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"axo-dendritic transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"narrow"},{"name":"axonal transport","type":"narrow"},{"name":"axoplasmic transport","type":"narrow"}],"termid":"GO:0008088"}


id: GO:0046611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the lysosomal membrane, where it acts as a proton pump to mediate acidification of the lysosomal lumen.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lysosomal proton-transporting V-type ATPase complex","synonyms":[{"name":"lysosomal hydrogen-translocating V-type ATPase complex","type":"exact"},{"name":"lysosomal membrane hydrogen-transporting ATPase","type":"broad"}],"termid":"GO:0046611"}


id: GO:0052349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052349)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052349"}


id: GO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate = 5-oxo-D-proline + H2O.","definition_xrefs":["RHEA:22360","EC:4.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"D-glutamate cyclase activity","secondary_identifiers":["KEGG_REACTION:R01583","MetaCyc:D-GLUTAMATE-CYCLASE-RXN"],"synonyms":[{"name":"D-glutamate hydro-lyase (cyclizing)","type":"related"},{"name":"D-glutamate hydro-lyase (cyclizing; 5-oxo-D-proline-forming)","type":"related"}],"termid":"GO:0047820"}


id: GO:1905258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:14752510","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","termid":"GO:1990442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"regulation of nitrosative stress-induced apoptosis","type":"related"}],"termid":"GO:1905258"}


id: GO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of the virion-bound pilus, followed by entry of the viral genome into the host cell through the pilus basal pore. Filamentous bacteriophages absorb to the tip of the F-pili and can enter the bacterial cell in this way.","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus basal pore (obsolete GO:0039668)","synonyms":[{"name":"filamentous viral entry into host cell via pilus retraction","type":"narrow"}],"termid":"GO:0039668"}


id: GO:0071170
data:
  {"annotated_genes":["SJAG_04855","SJAG_00073","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111116],"is_not":false,"summary":null,"term":"GO:0071170"},{"annotations":[98394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[89488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at a specific termination site.","definition_xrefs":["PMID:18723894","GOC:mah","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"site-specific DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071170","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071946":null}}


id: GO:0003688
data:
  {"annotated_genes":["SJAG_03451","SJAG_03216","SJAG_01762","SJAG_05301","SJAG_03927","SJAG_01267","SJAG_02800","SJAG_02394","SJAG_05239","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93465,93571,101586,103956,104166,106340,107494,107750,109290,111205],"is_not":false,"summary":null,"term":"GO:0003688"}]},"cv_name":"molecular_function","definition":"Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03216":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"DNA replication origin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ARS binding","type":"narrow"}],"termid":"GO:0003688","terms_by_termid":{"GO:0003688":null}}


id: PBO:0080658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 2","termid":"PBO:0080658"}


id: PATO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000352 metabolite composition value (obsolete PATO:0000352)","termid":"PATO:0000352"}


id: PBO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit D3","termid":"PBO:0060598"}


id: PBO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uner Tan Syndrome","termid":"PBO:0036373"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_02923","SJAG_04551","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90513,92515,98271],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5654560","GO:0008338","Reactome:R-HSA-5654566","GO:0016909","Reactome:R-HSA-445079","Reactome:R-HSA-5654562","KEGG_REACTION:R00162","Reactome:R-HSA-451366","GO:0008339","Reactome:R-HSA-5654565","Reactome:R-HSA-73722","Reactome:R-HSA-198733","Reactome:R-HSA-9626832","GO:0016908","MetaCyc:2.7.11.24-RXN","EC:2.7.11.24","Reactome:R-HSA-111898"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: PBO:0027004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_meiotic_cell_cycle","termid":"PBO:0027004"}


id: PBO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator homolog (predicted)","termid":"PBO:0002675"}


id: GO:0150152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["PMID:27901018","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of interleukin-17 production","termid":"GO:0032700"},{"relation_name":"is_a","term_name":"regulation of interleukin-17A production","termid":"GO:0150151"},{"relation_name":"negatively_regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-17A production","synonyms":[{"name":"negative regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150152"}


id: GO:1905027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane depolarization during AV node cell action potential.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:19726871","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of AV node cell action potential","termid":"GO:0098904"},{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"regulates","term_name":"membrane depolarization during AV node cell action potential","termid":"GO:0086045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during AV node cell action potential","synonyms":[{"name":"regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905027"}


id: PBO:0087411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (17 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3","termid":"PBO:0087411"}


id: PBO:0017976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Fub2 (predicted)","termid":"PBO:0017976"}


id: GO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the external substrate or to another cell and to initiate intracellular signaling. Cell adhesion receptors include integrins and cadherins.","definition_xrefs":["GOC:BHF-UCL","Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0038023","GO:0003674","GO:0005488","GO:0098631"],"is_obsolete":false,"name":"cell adhesion receptor activity","termid":"GO:0004895"}


id: PBO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_vegetative_growth","termid":"PBO:0031781"}


id: GO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mammary stem cell population by cell division. Mammary stem cells are a source of cells for growth of the mammary gland during puberty and gestation. These cells can give rise to both the luminal and myoepithelial cell types of the gland, and can regenerate the entire organ.","definition_xrefs":["PMID:15987436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary stem cell proliferation","termid":"GO:0002174"}


id: PBO:0109635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS2 C-terminal like (pseudogene)","termid":"PBO:0109635"}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: GO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0140056","GO:0016192","GO:0006810","GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"phagosome-lysosome docking","synonyms":[{"name":"lysosome recruitment to phagosome","type":"exact"}],"termid":"GO:0090384"}


id: PBO:0011995
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Johanson-Blizzard syndrome","termid":"PBO:0011995"}


id: GO:0051932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of gamma-aminobutyric acid (GABA). from a presynapse, across a chemical synapse, the subsequent activation of GABA receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos","ISBN:0126603030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, GABAergic","synonyms":[{"name":"GABAergic synaptic transmission","type":"exact"},{"name":"synaptic transmission, GABA mediated","type":"exact"},{"name":"synaptic transmission, gamma-aminobutyric acid mediated","type":"exact"},{"name":"synaptic transmission, gamma-aminobutyric acid-ergic","type":"exact"}],"termid":"GO:0051932"}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["UniProtKB:O42883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: GO:0106177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic GMP-AMP + 2 H2O = AMP + GMP.","definition_xrefs":["GOC:sp","PMID:25344812","RHEA:58808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic-GMP-AMP hydrolase activity","termid":"GO:0106177"}


id: GO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA structure formed by the minor groove of adenine-thymine-rich DNA regions. Examples of proteins having this function are AT-rich interaction domain (ARID)-containing proteins.","definition_xrefs":["PMID:10545119","GOC:jl","PMID:15802641","PMID:26223912","PMID:2670564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"minor groove of adenine-thymine-rich DNA binding","synonyms":[{"name":"AT DNA binding","type":"exact"},{"name":"AT binding","type":"exact"},{"name":"AT-rich DNA binding","type":"exact"}],"termid":"GO:0003680"}


id: PBO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine inducible SH2 containing protein","termid":"PBO:0043184"}


id: PBO:0029969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029969"}


id: PBO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1B","termid":"PBO:0039574"}


id: FYPO:0006852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the meiotic cell cycle (preceding meiosis I) is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of meiotic cell cycle phase","termid":"FYPO:0006851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of meiotic S phase","synonyms":[{"name":"decreased duration of S phase during meiotic cell cycle","type":"exact"},{"name":"decreased duration of premeiotic DNA replication","type":"related"},{"name":"reduced duration of meiotic S phase","type":"exact"}],"termid":"FYPO:0006852"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: MOD:00651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoylated residue","synonyms":[{"name":"N-hexadecanoylated residue","type":"exact"},{"name":"NPamRes","type":"exact"}],"termid":"MOD:00651"}


id: PBO:0057039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130b","termid":"PBO:0057039"}


id: FYPO:0007343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished lipid droplet formation","synonyms":[{"name":"abolished lipid droplet assembly","type":"exact"},{"name":"abolished lipid particle formation","type":"exact"},{"name":"lipid droplet formation abolished","type":"exact"}],"termid":"FYPO:0007343"}


id: GO:0097335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quetiapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quetiapine","termid":"GO:0097335"}


id: PBO:0004236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Mts4","termid":"PBO:0004236"}


id: PBO:0052609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB-A domain containing 2","termid":"PBO:0052609"}


id: PBO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202 (predicted)","termid":"PBO:0002747"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: PBO:0057970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689c","termid":"PBO:0057970"}


id: PBO:0053077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBX2 antisense RNA 1","termid":"PBO:0053077"}


id: FYPO:0004101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation. Although one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated, mitotic sister chromatid segregation does eventually go on to complete separation of chromosomes.","definition_xrefs":["PMID:17561805","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"lagging mitotic chromosomes, with complete sister chromatid separation","synonyms":[{"name":"chromosome segregation defects, lagging mitotic chromosomes, with complete sister chromatid separation","type":"exact"},{"name":"lagging chromosomes, with complete sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"lagging chromosomes, with complete sister chromatid separation, during vegetative growth","type":"exact"},{"name":"lagging mitotic chromosomes, with complete chromosome separation","type":"exact"},{"name":"lagging mitotic sister chromatids, with complete sister chromatid separation","type":"exact"}],"termid":"FYPO:0004101"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["PMID:26503245","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA binding","termid":"GO:1905493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of G-quadruplex DNA binding","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: PBO:0076165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 1","termid":"PBO:0076165"}


id: PBO:0003729
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulation","termid":"PBO:0003729"}


id: PBO:0066082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 10","termid":"PBO:0066082"}


id: GO:0047521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha,7alpha,12beta-trihydroxy-5beta-cholanate + NADP+ = 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:21424","EC:1.1.1.238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3alpha,7alpha,12beta-trihydroxy-5beta-cholanate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03495","MetaCyc:12-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"12-beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"}],"termid":"GO:0047521"}


id: GO:0035602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"negative regulation of apoptotic process in bone marrow cell","termid":"GO:0071866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"FGF receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"FGFR signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"}],"termid":"GO:0035602"}


id: PBO:0003861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA processing (predicted)","termid":"PBO:0003861"}


id: GO:1990819
data:
  {"annotated_genes":["SJAG_01943","SJAG_00667","SJAG_01017","SJAG_02486","SJAG_04887","SJAG_03453","SJAG_02718","SJAG_03444","SJAG_03646","SJAG_03357","SJAG_01171","SJAG_00677","SJAG_05001","SJAG_00938","SJAG_01888","SJAG_04781","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84471,85268,86998,88649,89961,90158,91418,91500,95668,96261,98061,98062,104182,104242,107417,110714,112270,115337],"is_not":false,"summary":null,"term":"GO:1990819"}]},"cv_name":"cellular_component","definition":"A focus at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion. Actin filaments form an aster-like structure from this location.","definition_xrefs":["PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_02486":null,"SJAG_02718":null,"SJAG_03011":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03646":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"actin fusion focus","type":"broad"}],"termid":"GO:1990819","terms_by_termid":{"GO:1990819":null}}


id: PBO:0081610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 534","termid":"PBO:0081610"}


id: GO:0045865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of recombination within rDNA repeats (obsolete GO:0045865)","synonyms":[{"name":"regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045865"}


id: PBO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 40 (pseudogene)","termid":"PBO:0045628"}


id: GO:0008603
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"}]},"cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cAMP-dependent protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cAMP-dependent protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase regulator activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase regulator activity","type":"exact"},{"name":"cAMP-dependent protein kinase, intrinsic regulator activity","type":"narrow"},{"name":"cyclic AMP-dependent protein kinase regulator activity","type":"exact"}],"termid":"GO:0008603","terms_by_termid":{"GO:0004862":null}}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: GO:0039641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion contained inside the protein capsid.","definition_xrefs":["PMID:15331712","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner membrane","synonyms":[{"name":"virion inner membrane","type":"exact"}],"termid":"GO:0039641"}


id: GO:1903183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["PMID:16731528","GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein sumoylation","termid":"GO:0033234"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of SUMO transferase activity","termid":"GO:1903182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SUMO transferase activity","synonyms":[{"name":"down regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down regulation of SUMO ligase activity","type":"exact"},{"name":"down-regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down-regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down-regulation of SUMO ligase activity","type":"exact"},{"name":"downregulation of SMT3 conjugating enzyme","type":"exact"},{"name":"downregulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"downregulation of SUMO ligase activity","type":"exact"},{"name":"inhibition of SMT3 conjugating enzyme","type":"narrow"},{"name":"inhibition of SUMO conjugating enzyme activity","type":"narrow"},{"name":"inhibition of SUMO ligase activity","type":"narrow"},{"name":"negative regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"negative regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903183"}


id: GO:1904184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25525879","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of pyruvate dehydrogenase activity","termid":"GO:1904182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyruvate dehydrogenase activity","synonyms":[{"name":"activation of pyruvate dehydrogenase activity","type":"narrow"},{"name":"activation of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"activation of pyruvic dehydrogenase activity","type":"narrow"},{"name":"positive regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904184"}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: GO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-tyrosine.","definition_xrefs":["RESID:AA0053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-tyrosine acetylation","termid":"GO:0018000"}


id: SO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase II binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_promoter","synonyms":[{"name":"RNA polymerase B promoter","type":"exact"},{"name":"RNApol II promoter","type":"exact"},{"name":"pol II promoter","type":"related"},{"name":"polymerase II promoter","type":"exact"}],"termid":"SO:0000170"}


id: GO:1904754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","PMID:20693317","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell migration","termid":"GO:0014911"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell migration","termid":"GO:1904752"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"activation of vascular associated smooth muscle cell migration","type":"narrow"},{"name":"activation of vascular smooth muscle cell migration","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"up regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"upregulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904754"}


id: PBO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa49","termid":"PBO:0090440"}


id: GO:0021588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellum. This process pertains to the initial formation of a structure from unspecified parts. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"cerebellum morphogenesis","termid":"GO:0021587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum formation","termid":"GO:0021588"}


id: GO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM receptor activity","termid":"GO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgM receptor activity","synonyms":[{"name":"high affinity IgM receptor activity","type":"exact"}],"termid":"GO:0002172"}


id: PBO:0084940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopper oxidase; integral membrane protein with similarity to Fet3p; may have a role in iron transport","termid":"PBO:0084940"}


id: PR:Q9UUE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate carboxylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.11c","secondary_identifiers":["UniProtKB:Q9UUE1"],"synonyms":[{"name":"PCB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC17G9.11c","type":"related"},{"name":"Spom972h-PC","type":"exact"},{"name":"pyruvic carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE1"}


id: PATO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaplastic","synonyms":[{"name":"trans-differentiated","type":"related"}],"termid":"PATO:0002101"}


id: FYPO:0002515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated, branched germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated, branched germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, branched germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0002515"}


id: PBO:0071044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 46","termid":"PBO:0071044"}


id: PBO:0065345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 2","termid":"PBO:0065345"}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: PBO:0067717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 15","termid":"PBO:0067717"}


id: GO:0006793
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id: FYPO:0002755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"decreased cysteine synthase activity","synonyms":[{"name":"reduced cysteine synthase activity","type":"exact"}],"termid":"FYPO:0002755"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: GO:1902191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbutanoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbutanoyl-CoA(4-) metabolic process","termid":"GO:1902189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902191"}


id: PBO:0059823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 3","termid":"PBO:0059823"}


id: PBO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid uptake transporter","termid":"PBO:0018215"}


id: PBO:0109622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B (pseudogene)","termid":"PBO:0109622"}


id: PBO:0051009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 4","termid":"PBO:0051009"}


id: GO:0045991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["PMID:10559153","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription","synonyms":[{"name":"positive regulation of transcription by carbon catabolites","type":"exact"}],"termid":"GO:0045991"}


id: GO:1900238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulation of metanephric mesenchymal cell migration, by platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","PMID:19019919","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"regulation of metanephric mesenchyme chemotaxis by platelet-derived growth factor receptor-beta signaling pathway","type":"related"}],"termid":"GO:1900238"}


id: PBO:0054242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1624","termid":"PBO:0054242"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_01637","SJAG_01472","SJAG_01886","SJAG_04309","SJAG_03385","SJAG_02197","SJAG_01678"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84488,91211,92741,93534,97985,103981,110350],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:18508925","PMID:35682545","PMID:12686616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: GO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by meiosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2 phase","termid":"GO:0051319"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic G2 phase","synonyms":[{"name":"G2 phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051331"}


id: SO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase III.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_III_TATA_box","synonyms":[{"name":"RNA polymerase III TATA box","type":"exact"}],"termid":"SO:0001662"}


id: PBO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic stem cell related","termid":"PBO:0046665"}


id: GO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an cytidine-uridine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine-uridine insertion","synonyms":[{"name":"RNA CU insertion","type":"exact"}],"termid":"GO:0070712"}


id: PBO:0012844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase Ski7","termid":"PBO:0012844"}


id: PBO:0059722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 30","termid":"PBO:0059722"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: PBO:0040072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 1","termid":"PBO:0040072"}


id: GO:0140462
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87490],"is_not":false,"summary":null,"term":"GO:0140462"}]},"cv_name":"biological_process","definition":"The organization of chromatin into heterochromatin at the pericentric region of a chromosome.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pericentric heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140462","terms_by_termid":{"GO:0140462":null}}


id: GO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"TDP catabolic process","synonyms":[{"name":"TDP breakdown","type":"exact"},{"name":"TDP catabolism","type":"exact"},{"name":"TDP degradation","type":"exact"}],"termid":"GO:0006245"}


id: GO:0021593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere morphogenesis","termid":"GO:0021593"}


id: GO:0000226
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id: GO:0005785
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id: PBO:0074805
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id: PBO:0000263
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (predicted)","termid":"PBO:0000263"}


id: PBO:0080067
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id: GO:1905736
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id: GO:0062112
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id: PBO:0084465
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id: GO:0022602
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id: GO:0002777
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id: PBO:0072703
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL2 pseudogene 1","termid":"PBO:0072703"}


id: FYPO:0006622
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id: PBO:0091390
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id: GO:1904294
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id: FYPO:0005052
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id: GO:1990184
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id: FYPO:0003947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal nonsense-mediated decay","synonyms":[{"name":"normal NMD","type":"exact"},{"name":"normal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"normal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003947"}


id: PBO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control (predicted)","termid":"PBO:0005330"}


id: PBO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase Idi1","termid":"PBO:0003172"}


id: PBO:0055696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LKAAEAR motif containing 1","termid":"PBO:0055696"}


id: GO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a virion.","definition_xrefs":["GOC:jid","PMID:213106","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion membrane","termid":"GO:0055036"}


id: PBO:0035718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_nucleosome-depleted_regions","termid":"PBO:0035718"}


id: GO:0019825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oxygen (O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oxygen binding","synonyms":[{"name":"cytochrome P450","type":"narrow"},{"name":"cytochrome P450 activity","type":"related"}],"termid":"GO:0019825"}


id: GO:0032675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-6 production","secondary_identifiers":["GO:0045408"],"synonyms":[{"name":"regulation of IL-6 production","type":"exact"},{"name":"regulation of interleukin-6 biosynthetic process","type":"narrow"}],"termid":"GO:0032675"}


id: GO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.","definition_xrefs":["VZ:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=2 icosahedral viral capsid","termid":"GO:0039616"}


id: PBO:0088760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase Pcs60","termid":"PBO:0088760"}


id: PBO:0057346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 541","termid":"PBO:0057346"}


id: MOD:01131
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dGuanosyl","termid":"MOD:01131"}


id: MOD:01210
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to the copper(1+) glutamate salt.","definition_xrefs":["Unimod:531#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-glutamate","synonyms":[{"name":"cuprous salt","type":"exact"},{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"}],"termid":"MOD:01210"}


id: GO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kojibiose + phosphate = beta-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["EC:2.4.1.230","RHEA:11176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kojibiose phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R07264","MetaCyc:2.4.1.230-RXN"],"synonyms":[{"name":"2-alpha-D-glucosyl-D-glucose:phosphate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033831"}


id: PBO:0051603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 26","termid":"PBO:0051603"}


id: GO:0034184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"}


id: PBO:0011150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatase Ptn1","termid":"PBO:0011150"}


id: PBO:0040113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 3","termid":"PBO:0040113"}


id: PBO:0067834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 136","termid":"PBO:0067834"}


id: PBO:0027997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_multinucleate_aseptate_vegetative_cell","termid":"PBO:0027997"}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PMID:22718908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: PBO:0079080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-8","termid":"PBO:0079080"}


id: FYPO:0007981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the distribution of lengths of interpolar microtubules in the mitotic spindle is abnormal during anaphase B.","definition_xrefs":["PMID:15689489","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"abnormal interpolar microtubule length distribution during anaphase B","termid":"FYPO:0007981"}


id: PBO:0046523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1","termid":"PBO:0046523"}


id: PBO:0078309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 5-1","termid":"PBO:0078309"}


id: PBO:0030332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_phospholipid_level","termid":"PBO:0030332"}


id: SO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","direct_ancestors":[{"relation_name":"derives_from","term_name":"C_D_box_snoRNA_primary_transcript","termid":"SO:0000595"},{"relation_name":"is_a","term_name":"snoRNA","termid":"SO:0000275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA","synonyms":[{"name":"C D box snoRNA","type":"exact"},{"name":"C/D box snoRNA","type":"exact"},{"name":"SNORD","type":"exact"},{"name":"box C/D snoRNA","type":"exact"}],"termid":"SO:0000593"}


id: PBO:0005465
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.20","termid":"PBO:0005465"}


id: PBO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 3","termid":"PBO:0046017"}


id: GO:0000917
data:
  {"annotated_genes":["SJAG_02222","SJAG_02215","SJAG_04690","SJAG_00514","SJAG_03631","SJAG_04455","SJAG_01453","SJAG_05179","SJAG_03353","SJAG_01805","SJAG_00229","SJAG_03342","SJAG_00082","SJAG_00883","SJAG_04666","SJAG_03048","SJAG_01790","SJAG_02514","SJAG_04509","SJAG_06270","SJAG_02645","SJAG_01188","SJAG_05290","SJAG_03581","SJAG_03704","SJAG_04468","SJAG_03379","SJAG_00442","SJAG_03681","SJAG_01114","SJAG_01386","SJAG_03123","SJAG_03592","SJAG_04776","SJAG_04597","SJAG_03936","SJAG_02916","SJAG_05285","SJAG_01774","SJAG_04943","SJAG_00526","SJAG_02169","SJAG_03508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85899],"is_not":false,"summary":null,"term":"GO:0000917"},{"annotations":[97054,102225,100770,104729,109189,103155,98759,95411,102209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[95788],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010974"},{"annotations":[98494],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[89059,91781,89598,101137,103345,103656,95789,86888,87870,95708,97395,106286,111996,88978],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[103157,111556,86038,89944,85415,113952,109473,88560,101279,102485],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[83730,90548,88561],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[98507,83731,106637,89948,86171],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[110482,102210],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[90714,86040,84093,77062,88565],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032955"},{"annotations":[113953],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"The assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis. The progeny cells that form a division septum are not able to exchange intracellular material.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00442":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01453":null,"SJAG_01774":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02514":null,"SJAG_02645":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_03123":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03379":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071937","GO:1902411"],"synonyms":[{"name":"division septum assembly involved in cell cycle cytokinesis","type":"narrow"},{"name":"division septum assembly involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"division septum formation","type":"exact"},{"name":"division septum formation involved in cell cycle cytokinesis","type":"narrow"},{"name":"division septum formation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"division septum formation involved in mitotic cell cycle","type":"narrow"},{"name":"formation of division septum","type":"exact"},{"name":"formation of division septum involved in mitotic cell cycle","type":"narrow"},{"name":"mitotic division septum assembly","type":"narrow"},{"name":"septation","type":"broad"},{"name":"septin assembly and septum biosynthesis","type":"related"},{"name":"septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"narrow"},{"name":"septin assembly and septum formation","type":"related"},{"name":"septin assembly and septum formation involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:0000917","terms_by_termid":{"GO:0000917":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0032955":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: GO:0003774
data:
  {"annotated_genes":["SJAG_02286","SJAG_02848","SJAG_02431","SJAG_03703","SJAG_00031","SJAG_02336","SJAG_00851","SJAG_01297","SJAG_00930","SJAG_01546","SJAG_00938","SJAG_04001","SJAG_02384","SJAG_01613","SJAG_03011","SJAG_04745","SJAG_00332","SJAG_00042","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[96080,98890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"},{"annotations":[93790,104256,99385,112285,113945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[90909,61052,92915,99671,85140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[90910,92916,83962,95361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[74691,100028,90911,99873,87301,99672,104381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"Generation of force resulting in movement, for example along a microfilament or microtubule, or in torque resulting in membrane scission or rotation of a flagellum. The energy required is obtained either from the hydrolysis of a nucleoside triphosphate or by an electrochemical proton gradient (proton-motive force).","definition_xrefs":["PMID:11242086","PMID:29716949","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02431":null,"SJAG_02848":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04745":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1861595"],"synonyms":[{"name":"motor activity","type":"broad"}],"termid":"GO:0003774","terms_by_termid":{"GO:0000146":null,"GO:0003777":null,"GO:0008569":null,"GO:0008574":null,"GO:0061791":null,"GO:1990606":null}}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: GO:0008856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage of supercoiled plasma DNA to linear DNA duplexes.","definition_xrefs":["EC:3.1.22.5"],"gene_count":0,"genotype_count":0,"name":"obsolete exodeoxyribonuclease X activity (obsolete GO:0008856)","secondary_identifiers":["EC:3.1.11.-","MetaCyc:3.1.22.5-RXN"],"synonyms":[{"name":"Escherichia coli endodeoxyribonuclease X activity","type":"narrow"},{"name":"Escherichia coli endodeoxyribonuclease activity","type":"related"},{"name":"deoxyribonuclease X activity","type":"related"}],"termid":"GO:0008856"}


id: PBO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 1","termid":"PBO:0046453"}


id: PBO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 1","termid":"PBO:0043669"}


id: PBO:0075390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp3 transcription factor pseudogene","termid":"PBO:0075390"}


id: PR:Q09130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif213 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.09","synonyms":[{"name":"Spom972h-tif213","type":"exact"},{"name":"eIF-2-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09130"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115176,115424,115431,115429],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[115177,115639,115342,115640,115341,115348,115349,115647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[115541,115548,115553,115540,115544,115556],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115481],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. Nucleus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["PomBase:mah","GO:0006997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01374":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleus organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02763","SJAG_01745","SJAG_01374","SJAG_03940","SJAG_04464","SJAG_03891","SJAG_03449","SJAG_03892","SJAG_05207","SJAG_01242","SJAG_04284"],"single_locus_genotype_uniquenames":["nem1delta","vps4delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","nup61delta","nem2delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","nup132delta","vps32delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cmp7delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","lem2delta","alx1delta"],"synonyms":[{"name":"abnormal nuclear organization","type":"exact"},{"name":"abnormal nucleus organisation","type":"exact"},{"name":"abnormal nucleus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000810","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0077416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 151A","termid":"PBO:0077416"}


id: PBO:0042107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 180","termid":"PBO:0042107"}


id: PBO:0090366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GRIP domain protein Grp2","termid":"PBO:0090366"}


id: PR:O14021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prw1 gene.","definition_xrefs":["UniProtKB:O14021","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RbAp48-related WD40 repeat-containing protein prw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.18","synonyms":[{"name":"Spom972h-prw1","type":"exact"}],"termid":"PR:O14021"}


id: PBO:0047677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin A","termid":"PBO:0047677"}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GO_REF:0000066","GOC:TermGenie","PMID:8606365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["UniProtKB:Q8NKC2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: PBO:0083573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF SEF1/YBL066C; YBL065W is a non-essential gene","termid":"PBO:0083573"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: FYPO:0008075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is increased.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0008075"}


id: GO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC protein binding","synonyms":[{"name":"major histocompatibility complex binding","type":"exact"},{"name":"major histocompatibility complex ligand","type":"narrow"}],"termid":"GO:0042287"}


id: GO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to angiostatin, a proteolytic product of plasminogen or plasmin containing at least one intact kringle domain, and which is an inhibitor of angiogenesis.","definition_xrefs":["PMID:16043488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"angiostatin binding","termid":"GO:0043532"}


id: GO:0098771
data:
  {"annotated_genes":["SJAG_00668","SJAG_04743","SJAG_02532","SJAG_04403","SJAG_04892","SJAG_04607","SJAG_04677","SJAG_03401","SJAG_01004","SJAG_03793","SJAG_00923","SJAG_00328","SJAG_04032","SJAG_04675","SJAG_00822","SJAG_01803","SJAG_01000","SJAG_04757","SJAG_02019","SJAG_03862","SJAG_03061","SJAG_03519","SJAG_03528","SJAG_02834","SJAG_04242","SJAG_01713","SJAG_01078","SJAG_02474","SJAG_04975","SJAG_01541","SJAG_04760","SJAG_05325","SJAG_03624","SJAG_00802","SJAG_00532","SJAG_00792","SJAG_00222","SJAG_03631","SJAG_03866","SJAG_02457","SJAG_04028","SJAG_04096","SJAG_04167","SJAG_01400","SJAG_00232","SJAG_02578","SJAG_02847","SJAG_04031","SJAG_04584","SJAG_04111","SJAG_00244","SJAG_01990","SJAG_03516","SJAG_01353","SJAG_02735","SJAG_04698","SJAG_03850","SJAG_01694","SJAG_01007","SJAG_03644","SJAG_02399","SJAG_02883","SJAG_02080","SJAG_04870","SJAG_04867","SJAG_03879","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90238,99910,90246,88594],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[101800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[92411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055070"},{"annotations":[87345,86861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[91824,104779,91593,97135,94248,108451,109470,111179,97747,94461,110032,92942,111648,114625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[89264,96274,92412,74030,103968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[89091,100375,90203,92413,74031,103526,109984,88446,85446,96603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[103701,86387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[96345,91462,113058,99918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[96172,88276,98712,98711,93328,110694,84902,105150,103693,111140,103813,98710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"},{"annotations":[93134,92874,85677,91575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[99919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89910,90855,100428,98892,97347,99696,110439,92320,89909,96275,86612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[113059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[101802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[99912,88591,88595,108900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[106897,61325,61569,106896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of inorganic ions within an organism or cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical 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ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098771","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006880":null,"GO:0006882":null,"GO:0010106":null,"GO:0010960":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030643":null,"GO:0032468":null,"GO:0033214":null,"GO:0033215":null,"GO:0055064":null,"GO:0055070":null,"GO:0055075":null}}


id: GO:0015095
data:
  {"annotated_genes":["SJAG_02484","SJAG_03516","SJAG_02578","SJAG_01639","SJAG_00211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56759,86389,103427,103703,110726],"is_not":false,"summary":null,"term":"GO:0015095"}]},"cv_name":"molecular_function","definition":"Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"magnesium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5339528","Reactome:R-HSA-5336453","RHEA:29827","MetaCyc:TRANS-RXN-141","Reactome:R-HSA-442661","Reactome:R-HSA-5336466","Reactome:R-HSA-5336454","Reactome:R-HSA-5339538"],"termid":"GO:0015095","terms_by_termid":{"GO:0015095":null}}


id: PBO:0082747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; contains two essential bromodomains, a bromo-adjacent homology (BAH) domain, and an AT hook; RSC1 has a paralog, RSC2, that arose from the whole genome duplication","termid":"PBO:0082747"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: FYPO:0007069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which assembly of the ribosomal small subunit is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ribosomal small subunit assembly","synonyms":[{"name":"abnormal 40S preribosome assembly","type":"narrow"},{"name":"abnormal 40S ribosomal subunit assembly","type":"narrow"},{"name":"abnormal pre-40S ribosome assembly","type":"narrow"},{"name":"abnormal ribosomal small subunit assembly during mitotic cell cycle","type":"related"},{"name":"abnormal ribosomal small subunit assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007069"}


id: PBO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD68 molecule","termid":"PBO:0042336"}


id: GO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + pyridoxal = 4-pyridoxolactone + H+ + NADH.","definition_xrefs":["RHEA:21336","EC:1.1.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyridoxal 4-dehydrogenase activity","secondary_identifiers":["MetaCyc:PYRIDOXAL-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01707"],"synonyms":[{"name":"pyridoxal dehydrogenase activity","type":"related"},{"name":"pyridoxal:NAD+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0050235"}


id: PBO:0078210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-3","termid":"PBO:0078210"}


id: PBO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL26L1 antisense RNA 1","termid":"PBO:0071278"}


id: GO:0034956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphenyl ether + NADH + O2 + H+ = phenol + catechol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"diphenyl ether 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034956"}


id: FYPO:0004308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CENP-A-containing chromatin organization is abnormal.","definition_xrefs":["PMID:9230309","PomBase:vw","PomBase:mah","GO:0061641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin organization","synonyms":[{"name":"abnormal CENP-A containing chromatin organisation","type":"exact"},{"name":"abnormal CENP-A containing chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing chromatin organization during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization at centromere central core","type":"related"}],"termid":"FYPO:0004308"}


id: PBO:0080624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR70 pseudogene 1","termid":"PBO:0080624"}


id: PATO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density which is lower relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"dense","termid":"PATO:0001164"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mass density","synonyms":[{"name":"low density","type":"exact"}],"termid":"PATO:0001790"}


id: GO:1902370
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111626],"is_not":false,"summary":null,"term":"GO:1902370"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of tRNA breakdown","type":"exact"},{"name":"regulation of tRNA catabolism","type":"exact"},{"name":"regulation of tRNA degradation","type":"exact"}],"termid":"GO:1902370","terms_by_termid":{"GO:1902370":null}}


id: GO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of dUTP pyrophosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"dUTP pyrophosphatase inhibitor activity","termid":"GO:0004858"}


id: PBO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 74","termid":"PBO:0050988"}


id: FYPO:0004559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"viable swollen spheroid vegetative cell","synonyms":[{"name":"viable enlarged spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"viable large spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vegetative cell","type":"exact"},{"name":"viable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004559"}


id: GO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an olfactory bulb tufted cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb tufted cell development","termid":"GO:0061449"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["PMID:10209156","PMID:9255069","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: PBO:0059494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 receptor","termid":"PBO:0059494"}


id: GO:0032493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.","definition_xrefs":["GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterial lipoprotein","termid":"GO:0032493"}


id: GO:0042716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment-bearing structure that is derived from the cytoplasmic membrane, sometimes consisting of simple invaginations and sometimes a complete vesicle. This component is found in certain photosynthetic bacteria and cyanobacteria.","definition_xrefs":["GOC:jl","ISBN:0395825172","PMID:11867431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived chromatophore","synonyms":[{"name":"chromatophore vesicle","type":"related"}],"termid":"GO:0042716"}


id: PATO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating gradually in a rounded end.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt","termid":"PATO:0001950"}


id: PBO:0083633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; part of a Prt1p-Rpg1p-Nip1p subcomplex that stimulates binding of mRNA and tRNA(i)Met to ribosomes; essential for loading mRNA onto ribosome at entry and exit channels of preinitiation complex; involved in translation reinitiation; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083633"}


id: PBO:0078464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-2","termid":"PBO:0078464"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:28497810","PMID:30279482","PMID:34608293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: PBO:0083815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential splicing factor; associated with Prp19p and the spliceosome, contains an N-terminal c-Myb DNA binding motif necessary for cell viability but not for Prp19p association, evolutionarily conserved and homologous to S. pombe Cdc5p","termid":"PBO:0083815"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: PBO:0034415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_specification_of","termid":"PBO:0034415"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: PBO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 1","termid":"PBO:0050958"}


id: GO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis by an increase in epimerase activity. This epimerase activity catalyzes the reaction that converts D-glucuronate into its diastereoisomer in heparan sulfate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010909"},{"relation_name":"is_a","term_name":"positive regulation of isomerase activity","termid":"GO:0010912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heparan sulfate proteoglycan biosynthesis by positive regulation of epimerase activity","termid":"GO:0010910"}


id: PBO:0089109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1","termid":"PBO:0089109"}


id: GO:1990659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining manganese ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of metal ion","termid":"GO:0051238"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular manganese ion homeostasis","termid":"GO:0030026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"sequestering of manganese ion","synonyms":[{"name":"manganese ion retention","type":"exact"},{"name":"manganese ion sequestering","type":"exact"},{"name":"manganese ion sequestration","type":"exact"},{"name":"manganese ion storage","type":"exact"},{"name":"retention of manganese ion","type":"exact"},{"name":"sequestration of manganese ion","type":"exact"},{"name":"storage of manganese ion","type":"exact"}],"termid":"GO:1990659"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: PBO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit (predicted)","termid":"PBO:0001721"}


id: PBO:0076371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 8","termid":"PBO:0076371"}


id: SO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been predicted using sequence similarity to EST or cDNA data.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supported_by_EST_or_cDNA","synonyms":[{"name":"supported by EST or cDNA","type":"exact"}],"termid":"SO:0000909"}


id: PBO:0039229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 3","termid":"PBO:0039229"}


id: FYPO:0000898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fusion, the merging of two or more separate mitochondria into a single compartment, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0008053","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial fusion","synonyms":[{"name":"normal mitochondrial fusion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fusion during vegetative growth","type":"exact"}],"termid":"FYPO:0000898"}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: PR:P36630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin-B2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.03","secondary_identifiers":["UniProtKB:P36630"],"synonyms":[{"name":"Spom972h-CCNB2","type":"exact"}],"termid":"PR:P36630"}


id: PBO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp2 (predicted)","termid":"PBO:0003291"}


id: PATO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the front of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved rostral","synonyms":[{"name":"curved anterior","type":"exact"},{"name":"curved superior (human torso)","type":"exact"}],"termid":"PATO:0001466"}


id: PBO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome alignment maintaining phosphoprotein 1","termid":"PBO:0042942"}


id: PBO:0062922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 10","termid":"PBO:0062922"}


id: GO:0047597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxocineole + H+ + NADPH + O2 = 1,6,6-trimethyl-2,7-dioxabicyclo[3.2.2]nonan-3-one + H2O + NADP+.","definition_xrefs":["EC:1.14.13.51","RHEA:24324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-oxocineole dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02995","MetaCyc:6-OXOCINEOLE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"6-oxocineole oxygenase activity","type":"related"},{"name":"6-oxocineole,NADPH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047597"}


id: SO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ncRNA that is part of a ribonucleoprotein that cleaves the primary pre-rRNA transcript in the process of producing mature rRNA molecules.","definition_xrefs":["GOC:kgc"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_cleavage_snoRNA_primary_transcript","termid":"SO:0000582"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_cleavage_RNA","synonyms":[{"name":"rRNA cleavage RNA","type":"exact"}],"termid":"SO:0005843"}


id: PBO:0046872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule C","termid":"PBO:0046872"}


