# terms

id: PR:Q9UUF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.04c","secondary_identifiers":["UniProtKB:Q9UUF2"],"synonyms":[{"name":"MetRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-metG","type":"exact"},{"name":"methionyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUF2"}


id: PBO:0064575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostin","termid":"PBO:0064575"}


id: PBO:0082466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to the endoplasmic reticulum membrane; member of the calcium exchanger (CAX) family; potential Cdc28p substrate","termid":"PBO:0082466"}


id: PBO:0070375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 2","termid":"PBO:0070375"}


id: GO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart jogging (obsolete GO:0003303)","synonyms":[{"name":"BMP signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003303"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: PBO:0039364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-Mullerian hormone receptor type 2","termid":"PBO:0039364"}


id: PBO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Intermediate light chain-Like","termid":"PBO:0002661"}


id: PBO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.13","termid":"PBO:0004675"}


id: PBO:0068924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 167, pseudogene","termid":"PBO:0068924"}


id: GO:0033637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to cold (obsolete GO:0033637)","synonyms":[{"name":"freezing tolerance","type":"related"}],"termid":"GO:0033637"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: PBO:0041299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4C","termid":"PBO:0041299"}


id: GO:0010425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group, to C-5 or N-4, of a cytosine located within a CNG sequence in a DNA molecule. N stands for any nucleotide.","definition_xrefs":["PMID:17239600","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CNG sequence (obsolete GO:0010425)","synonyms":[{"name":"cytosine methylation within a CNG sequence","type":"exact"}],"termid":"GO:0010425"}


id: GO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003034"}


id: PBO:0012313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac3 (predicted)","termid":"PBO:0012313"}


id: FYPO:0003217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the chromatin silencing at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere central core","termid":"FYPO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere central core","synonyms":[{"name":"decreased chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"decreased negative regulation of transcription at centromere central core","type":"related"},{"name":"decreased transcriptional repression at centromere central core","type":"related"},{"name":"reduced chromatin silencing at centromere central core","type":"exact"}],"termid":"FYPO:0003217"}


id: PBO:0082353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase; a hexameric enzyme, catalyzes the first step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control","termid":"PBO:0082353"}


id: PBO:0029493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiosis_II_spindle","termid":"PBO:0029493"}


id: PBO:0086573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7","termid":"PBO:0086573"}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95486],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: SO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion where the deletion brings together transcription factor binding sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_fusion","termid":"SO:0001887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_fusion","synonyms":[{"name":"TFBS fusion ","type":"exact"},{"name":"transcription factor binding site fusion","type":"exact"}],"termid":"SO:0001888"}


id: GO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).","definition_xrefs":["PMID:8626640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0022857","GO:0003824","GO:0016740","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity","termid":"GO:0090582"}


id: PBO:0003999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin CycC, Srb mediator subunit Srb11","termid":"PBO:0003999"}


id: PBO:0026912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0026912"}


id: SO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding one or more small nucleolar RNAs (SO:0000275).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_primary_transcript","synonyms":[{"name":"snoRNA primary transcript","type":"exact"}],"termid":"SO:0000232"}


id: PBO:0077425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B pseudogene 1","termid":"PBO:0077425"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: GO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in the lower half of some cells formed from extensive infoldings of the basal plasma membrane; includes cytoplasm adjacent to the infolded membrane.","definition_xrefs":["PMID:11640882","GOC:mah","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal labyrinth","termid":"GO:0033774"}


id: PBO:0054221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1602","termid":"PBO:0054221"}


id: GO:0006279
data:
  {"annotated_genes":["SJAG_00857","SJAG_01762","SJAG_02348","SJAG_03855","SJAG_04877","SJAG_02908","SJAG_04210","SJAG_03525","SJAG_00884","SJAG_01354","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88103,91374,93569,100443,102529,103360,103464,106336,107658,111202,111372,111373],"is_not":false,"summary":null,"term":"GO:0006279"}]},"cv_name":"biological_process","definition":"The replication of DNA that precedes meiotic cell division.","definition_xrefs":["GO_REF:0000060","GOC:ai","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication","termid":"GO:0033260"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02908":null,"SJAG_03525":null,"SJAG_03855":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902968"],"synonyms":[{"name":"DNA replication during S phase involved in meiotic cell cycle","type":"related"},{"name":"DNA replication involved in S phase involved in meiotic cell cycle","type":"exact"},{"name":"DNA replication involved in S-phase involved in meiotic cell cycle","type":"exact"},{"name":"meiotic DNA replication","type":"related"},{"name":"meiotic DNA synthesis","type":"related"},{"name":"meiotic cell cycle DNA replication","type":"exact"},{"name":"meiotic nuclear cell cycle DNA replication","type":"exact"},{"name":"nuclear cell cycle DNA replication involved in meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA synthesis","type":"related"}],"termid":"GO:0006279","terms_by_termid":{"GO:0006279":null}}


id: PBO:0090833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25","termid":"PBO:0090833"}


id: GO:0035532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:add","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 6 production","termid":"GO:0035531"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035536"],"synonyms":[{"name":"negative regulation of CCL6 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035532"}


id: GO:0014068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade.","definition_xrefs":["GOC:ef"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase signaling (obsolete GO:0014068)","synonyms":[{"name":"activation of phosphoinositide 3-kinase cascade","type":"narrow"},{"name":"positive regulation of PI 3-kinase cascade","type":"exact"},{"name":"positive regulation of PI3K cascade","type":"exact"},{"name":"positive regulation of phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"positive regulation of phosphoinositide 3-kinase cascade","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase cascade","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase cascade","type":"exact"}],"termid":"GO:0014068"}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: GO:0071724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diacylated bacterial lipopeptide stimulus.","definition_xrefs":["GOC:add","PMID:2757794","PMID:12077222","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diacyl bacterial lipopeptide","synonyms":[{"name":"response to diacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071724"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00823","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102688,103516],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["GOC:bhm","PMID:10026142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: PBO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor","termid":"PBO:0002382"}


id: GO:0035116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. The hindlimbs are the posterior limbs of an animal.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"hindlimb morphogenesis","termid":"GO:0035137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hindlimb morphogenesis","termid":"GO:0035116"}


id: FYECO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Adenine was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000065 absence of adenine (obsolete FYECO:0000065)","termid":"FYECO:0000065"}


id: GO:0030256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three secretory proteins that carry out secretion in the type I secretion system: an inner membrane transport ATPase (termed ABC protein for ATP-binding cassette), which provides the energy for protein secretion; an outer membrane protein, which is exported via the sec pathway; and a membrane fusion protein, which is anchored in the inner membrane and spans the periplasmic space.","definition_xrefs":["PMID:9618447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type I protein secretion system complex","synonyms":[{"name":"ABC translocator complex","type":"broad"}],"termid":"GO:0030256"}


id: PBO:0053854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1123","termid":"PBO:0053854"}


id: PBO:0073474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan epsilon","termid":"PBO:0073474"}


id: PBO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit alpha","termid":"PBO:0047303"}


id: PBO:0086898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0086898"}


id: PBO:0086724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a PH domain and binds phosphatidylinositols and phosphatidylethanolamine in a large-scale study; YNL144C has a paralog, YHR131C, that arose from the whole genome duplication","termid":"PBO:0086724"}


id: GO:0036261
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92176],"is_not":false,"summary":null,"term":"GO:0036261"}]},"cv_name":"biological_process","definition":"Hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. This type of cap modification occurs on small nuclear RNAs (snRNAs) and small nucleolar RNAs (snoRNAs) and is dependent on prior guanine-N7 methylation.","definition_xrefs":["PMID:11983179","GOC:bf","GOC:krc","GOC:BHF","GOC:mah","PMID:18775984","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine cap hypermethylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"TMG cap formation","type":"exact"},{"name":"conversion of m(7)G to m(3)G","type":"exact"},{"name":"hypermethylation of snRNA cap","type":"narrow"},{"name":"hypermethylation of snoRNA cap","type":"narrow"},{"name":"m(7)G cap hypermethylation","type":"exact"},{"name":"snRNA capping","type":"narrow"},{"name":"snoRNA capping","type":"narrow"}],"termid":"GO:0036261","terms_by_termid":{"GO:0036261":null}}


id: PBO:0057314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518a-2","termid":"PBO:0057314"}


id: PBO:0057093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 190a","termid":"PBO:0057093"}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: GO:0047071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + O2 = 3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1(10),2-dien-4-oate + H+.","definition_xrefs":["EC:1.13.11.25","RHEA:21352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R04597","MetaCyc:1.13.11.25-RXN","UM-BBD_reactionID:r1151"],"synonyms":[{"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione:oxygen 4,5-oxidoreductase (decyclizing)","type":"related"},{"name":"3-alkylcatechol 2,3-dioxygenase activity","type":"related"},{"name":"steroid 4,5-dioxygenase activity","type":"broad"}],"termid":"GO:0047071"}


id: FYPO:0006312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-3'-diphospho-5'-guanosine diphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"reduced DNA-3'-diphospho-5'-guanosine diphosphatase activity","type":"exact"}],"termid":"FYPO:0006312"}


id: PBO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, TRAMP complex subunit Mtr4","termid":"PBO:0000921"}


id: GO:1990763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the arrestin family, proteins involved in agonist-mediated desensitization of G protein-coupled receptors.","definition_xrefs":["PMID:23911909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"arrestin family protein binding","termid":"GO:1990763"}


id: PBO:0079384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 2","termid":"PBO:0079384"}


id: PBO:0064403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 1","termid":"PBO:0064403"}


id: FYPO:0004136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0002820"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0004136"}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: PBO:0072992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 1","termid":"PBO:0072992"}


id: PBO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 5","termid":"PBO:0042979"}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: PBO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 15","termid":"PBO:0052691"}


id: PBO:0017739
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome","termid":"PBO:0017739"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: PBO:0042814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERS3 antisense RNA 1","termid":"PBO:0042814"}


id: PBO:0061758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase 1","termid":"PBO:0061758"}


id: PBO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor","termid":"PBO:0060879"}


id: FYPO:0006712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular acetyl-CoA level","synonyms":[{"name":"decreased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular acetyl-CoA level during vegetative growth","type":"exact"},{"name":"reduced cellular acetyl-CoA level","type":"exact"}],"termid":"FYPO:0006712"}


id: PBO:0082118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylglutamate synthase (glutamate N-acetyltransferase); mitochondrial enzyme that catalyzes the first step in the biosynthesis of the arginine precursor ornithine; forms a complex with Arg5,6p","termid":"PBO:0082118"}


id: PATO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grey","termid":"PATO:0000950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light grey","termid":"PATO:0001252"}


id: PR:Q9C0X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11093:SF3","OMA:SCHPO02044","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.09","secondary_identifiers":["UniProtKB:Q9C0X6"],"synonyms":[{"name":"Spom972h-RUVBL1","type":"exact"}],"termid":"PR:Q9C0X6"}


id: PBO:0034530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_inner_repeat","termid":"PBO:0034530"}


id: SO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The tanscription start site that is most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major_TSS","synonyms":[{"name":"major TSS","type":"exact"},{"name":"major transcription start site","type":"exact"}],"termid":"SO:0001238"}


id: PR:Q1MTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cti6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit cti6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.08","synonyms":[{"name":"Spom972h-cti6","type":"exact"}],"termid":"PR:Q1MTR4"}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: GO:0072154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an S1 cell in the kidney.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 cell differentiation","termid":"GO:0072062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell fate commitment","synonyms":[{"name":"S1 cell fate commitment","type":"exact"}],"termid":"GO:0072154"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["UniProtKB:Q1MTQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: PR:000050528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.12","termid":"PR:000050528"}


id: GO:0030970
data:
  {"annotated_genes":["SJAG_00530","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85437,89081],"is_not":false,"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.","definition_xrefs":["PMID:11994744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"},{"relation_name":"is_a","term_name":"endoplasmic reticulum to cytosol transport","termid":"GO:1903513"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0030163","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"retrograde protein transport, ER to cytosol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein dislocation from ER","type":"exact"},{"name":"protein retrotranslocation, ER to cytosol","type":"exact"},{"name":"retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:0030970","terms_by_termid":{"GO:0030970":null}}


id: GO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enzyme, located in the plasma membrane, that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:mtg_sensu","GOC:kd","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase complex (ubiquinone)","termid":"GO:0045257"},{"relation_name":"is_a","term_name":"plasma membrane succinate dehydrogenase complex","termid":"GO:0045282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886","GO:0005737"],"is_obsolete":false,"name":"plasma membrane succinate dehydrogenase complex (ubiquinone)","termid":"GO:0045258"}


id: GO:0031902
data:
  {"annotated_genes":["SJAG_05210","SJAG_04349","SJAG_03347","SJAG_04024","SJAG_02100","SJAG_01981","SJAG_04513","SJAG_04023","SJAG_02429","SJAG_03892"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84315,88140,93795,95628,97200,105907,105917],"is_not":false,"summary":null,"term":"GO:0031902"},{"annotations":[88257,115361,90057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a late endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_03347":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04513":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"late endosome membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null},"termid":"GO:0031902","terms_by_termid":{"GO:0031902":null,"GO:0032585":null}}


id: GO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. This process contributes to the developmental growth of the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological muscle hypertrophy","termid":"GO:0003298"},{"relation_name":"is_a","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"}


id: MOD:01162
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"fucosylated biantennary","synonyms":[{"name":"Fucosylated biantennary","type":"related"},{"name":"dHex(1)Hex(5)HexNAc(4)","type":"related"}],"termid":"MOD:01162"}


id: GO:0097100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to supercoiled DNA. For example, during replication and transcription, template DNA is negatively supercoiled in the receding downstream DNA and positively supercoiled in the approaching downstream DNA.","definition_xrefs":["GOC:pr","Wikipedia:DNA_supercoil","PMID:21345933","GOC:rph","PMID:20723754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"supercoiled DNA binding","termid":"GO:0097100"}


id: PBO:0087773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit","termid":"PBO:0087773"}


id: GO:0009107
data:
  {"annotated_genes":["SJAG_03553","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93308,108793],"is_not":false,"summary":null,"term":"GO:0009107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_03553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lipoate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0009105"],"synonyms":[{"name":"lipoate anabolism","type":"exact"},{"name":"lipoate biosynthesis","type":"exact"},{"name":"lipoate formation","type":"exact"},{"name":"lipoate synthesis","type":"exact"},{"name":"lipoic acid anabolism","type":"exact"},{"name":"lipoic acid biosynthesis","type":"exact"},{"name":"lipoic acid biosynthetic process","type":"exact"},{"name":"lipoic acid formation","type":"exact"},{"name":"lipoic acid synthesis","type":"exact"}],"termid":"GO:0009107","terms_by_termid":{"GO:0009107":null}}


id: SO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small untranslated RNA which is induced in response to oxidative stress in Escherichia coli. Acts as a global regulator to activate or repress the expression of as many as 40 genes, including the fhlA-encoded transcriptional activator and the rpoS-encoded sigma(s) subunit of RNA polymerase. OxyS is bound by the Hfq protein, that increases the OxyS RNA interaction with its target messages.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxyS_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/OxyS_RNA"],"synonyms":[{"name":"OxyS RNA","type":"exact"}],"termid":"SO:0000384"}


id: PBO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B2","termid":"PBO:0043783"}


id: GO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a Cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate mRNA or circRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cap-independent translational initiation","termid":"GO:0002190"}


id: GO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"},{"relation_name":"is_a","term_name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"},{"relation_name":"negatively_regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072308"}


id: FYPO:0002193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, contains one or more septa, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"has_part","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001312","FYPO:0000002","FYPO:0000004","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"inviable normal volume septated spheroid vegetative cell","synonyms":[{"name":"inviable normal volume septated rounded vegetative cell","type":"related"},{"name":"inviable normal volume septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002193"}


id: GO:2000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"},{"relation_name":"is_a","term_name":"negative regulation of ribonucleoprotein complex localization","termid":"GO:2000198"},{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"negatively_regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0006913","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"negative regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"negative regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000201"}


id: GO:0016191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the protein coat on a synaptic vesicle following the pinching step at the end of budding from the presynaptic membrane.","definition_xrefs":["GOC:curators","PMID:10099709","PMID:24596248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat disassembly","termid":"GO:0072318"},{"relation_name":"part_of","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle uncoating","synonyms":[{"name":"synaptic vesicle coat depolymerization","type":"exact"},{"name":"synaptic vesicle coat protein depolymerization","type":"exact"}],"termid":"GO:0016191"}


id: PBO:0059170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 1","termid":"PBO:0059170"}


id: PBO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.3","termid":"PBO:0005192"}


id: PBO:0076667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 1","termid":"PBO:0076667"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: FYPO:0005256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased carboxypeptidase activity","synonyms":[{"name":"reduced carboxypeptidase activity","type":"exact"}],"termid":"FYPO:0005256"}


id: GO:0010886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of cholesterol storage","termid":"GO:0010885"},{"relation_name":"positively_regulates","term_name":"cholesterol storage","termid":"GO:0010878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol storage","synonyms":[{"name":"positive regulation of cholesterol sequestration","type":"narrow"}],"termid":"GO:0010886"}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: GO:1902350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to chloroquine","termid":"GO:1902349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloroquine","termid":"GO:1902350"}


id: PBO:0018166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit, Ran GTPase binding protein Gid1 (predicted)","termid":"PBO:0018166"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN","KEGG_REACTION:R01174"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: PBO:0091820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YDR293C","termid":"PBO:0091820"}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: PBO:0086552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL034C is not an essential gene","termid":"PBO:0086552"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: FYPO:0006245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is decreased over medium (90-940 kb) ranges within a chromosome arm.","definition_xrefs":["PomBase:mah","PMID:28825727"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased medium range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006245)","synonyms":[{"name":"decreased medium range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased medium range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"decreased medium range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"},{"name":"reduced medium range intra-arm mitotic chromosome condensation during interphase","type":"exact"}],"termid":"FYPO:0006245"}


id: GO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain aldehyde + NAD+ = a long-chain carboxylate + NADH + H+. A long-chain aldehyde is one with more than 12 carbons.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN","EC:1.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"long-chain-aldehyde dehydrogenase activity","secondary_identifiers":["RHEA:10652","UM-BBD_reactionID:r1404"],"synonyms":[{"name":"fatty aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"long-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050061"}


id: RO:HOM0000072
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves an ectopic structure and the normally positioned structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homeosis_relationship_with","synonyms":[{"name":"heterotopy","type":"related"}],"termid":"RO:HOM0000072"}


id: GO:0048575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from vegetative to reproductive phase as a result of detection of, or exposure to, a period of light that falls short of the critical day length. The critical day length varies between species. Although the term is short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 minus the critical day length.","definition_xrefs":["ISBN:0709408862","GOC:jid","GOC:pj","ISBN:0582015952","ISBN:0697037754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-day photoperiodism","termid":"GO:0048572"},{"relation_name":"is_a","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism, flowering","synonyms":[{"name":"long-night photoperiodism, flowering","type":"exact"},{"name":"response to long-night, flowering","type":"exact"},{"name":"response to short-day, flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering","type":"exact"},{"name":"short-day photoperiodic control of flowering time","type":"exact"},{"name":"short-day photoperiodic control of inflorescence development","type":"exact"}],"termid":"GO:0048575"}


id: PBO:0052209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 5","termid":"PBO:0052209"}


id: GO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}


id: PBO:0048064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 13","termid":"PBO:0048064"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: PBO:0052293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 pseudogene 1","termid":"PBO:0052293"}


id: GO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host cell wall cellulose (obsolete GO:0052172)","termid":"GO:0052172"}


id: GO:0071448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkyl hydroperoxide","termid":"GO:0033195"},{"relation_name":"is_a","term_name":"cellular response to hydroperoxide","termid":"GO:0071447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkyl hydroperoxide","termid":"GO:0071448"}


id: GO:0033110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the two lipid bilayers surrounding a Cvt vesicle, a vesicle that functions in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["GOC:ecd","PMID:20065092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"Cvt vesicle","termid":"GO:0033107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Cvt vesicle membrane","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle membrane","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle membrane","type":"exact"}],"termid":"GO:0033110"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: GO:1904462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:26116408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"saponin catabolic process","termid":"GO:0016136"},{"relation_name":"is_a","term_name":"beta-glucoside catabolic process","termid":"GO:1901805"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside catabolic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside breakdown","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside catabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside degradation","type":"exact"}],"termid":"GO:1904462"}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: PBO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb1","termid":"PBO:0090656"}


id: PBO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170 pseudogene 1","termid":"PBO:0042793"}


id: FYPO:0006536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell periphery during vegetative growth","synonyms":[{"name":"increased protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"increased protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006536"}


id: GO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrogen peroxide is transported across a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide transmembrane transport","synonyms":[{"name":"hydrogen peroxide membrane transport","type":"exact"}],"termid":"GO:0080170"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_00082","SJAG_03048","SJAG_01805","SJAG_01837","SJAG_04332","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107310,112773,98503,86169,89946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90678,98516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072455","GO:0072473"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oleoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0004320)","synonyms":[{"name":"oleoyl-ACP hydrolase activity","type":"exact"},{"name":"oleoyl-ACP thioesterase activity","type":"related"},{"name":"oleoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"oleoyl-acyl carrier protein thioesterase activity","type":"related"},{"name":"oleoyl-acyl-carrier-protein hydrolase","type":"broad"}],"termid":"GO:0004320"}


id: PBO:0038665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 3","termid":"PBO:0038665"}


id: FYPO:0000781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during vegetative growth","synonyms":[{"name":"decreased transcription during mitotic cell cycle","type":"related"},{"name":"reduced transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0000781"}


id: PATO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, triangular.","direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtriangular","termid":"PATO:0002230"}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: PBO:0084838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit","termid":"PBO:0084838"}


id: GO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis within host (obsolete GO:0052142)","termid":"GO:0052142"}


id: GO:1900651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of dehydroaustinol biosynthetic process","termid":"GO:1900649"},{"relation_name":"positively_regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"positive regulation of dehydroaustinol formation","type":"exact"},{"name":"activation of dehydroaustinol anabolism","type":"exact"},{"name":"activation of dehydroaustinol biosynthesis","type":"exact"},{"name":"activation of dehydroaustinol biosynthetic process","type":"narrow"},{"name":"activation of dehydroaustinol formation","type":"exact"},{"name":"activation of dehydroaustinol synthesis","type":"exact"},{"name":"positive regulation of dehydroaustinol anabolism","type":"exact"},{"name":"positive regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"positive regulation of dehydroaustinol synthesis","type":"exact"},{"name":"up regulation of dehydroaustinol anabolism","type":"exact"},{"name":"up regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"up regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"up regulation of dehydroaustinol formation","type":"exact"},{"name":"up regulation of dehydroaustinol synthesis","type":"exact"},{"name":"up-regulation of dehydroaustinol anabolism","type":"exact"},{"name":"up-regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"up-regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"up-regulation of dehydroaustinol formation","type":"exact"},{"name":"up-regulation of dehydroaustinol synthesis","type":"exact"},{"name":"upregulation of dehydroaustinol anabolism","type":"exact"},{"name":"upregulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"upregulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"upregulation of dehydroaustinol formation","type":"exact"},{"name":"upregulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900651"}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["UniProtKB:P87179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: PBO:0004700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm6","termid":"PBO:0004700"}


id: GO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when antral spaces begin to form in the follicle cells. Mitochondria form centers for yolk concentration.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scattered antral spaces stage","synonyms":[{"name":"mammalian oogenesis stage 6","type":"exact"}],"termid":"GO:0048163"}


id: GO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070099"}


id: PBO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 6-1","termid":"PBO:0061168"}


id: GO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the determination of left/right symmetry.","definition_xrefs":["GOC:mtg_heart","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in determination of left/right symmetry (obsolete GO:0003154)","synonyms":[{"name":"BMP signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"BMP signalling pathway involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0003154"}


id: PBO:0054301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1692","termid":"PBO:0054301"}


id: GO:0106355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:19473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NADH] activity","termid":"GO:0106355"}


id: PBO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member A3","termid":"PBO:0044312"}


id: PR:Q9P3A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knd1 gene.","definition_xrefs":["UniProtKB:Q9P3A8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-associated NEDD8-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.07c","synonyms":[{"name":"Spom972h-knd1","type":"exact"},{"name":"cullin-associated and neddylation-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3A8"}


id: PATO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000216 heart rate (obsolete PATO:0000216)","termid":"PATO:0000216"}


id: PBO:0076926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 2","termid":"PBO:0076926"}


id: PBO:0088540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein, with zinc finger, LIM-type","termid":"PBO:0088540"}


id: PomGeneEx:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA absent","synonyms":[{"name":"RNA expression absent","type":"exact"}],"termid":"PomGeneEx:0000015"}


id: GO:0106317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methane + NADH + H+ + O2 = methanol + NAD+ + H2O.","definition_xrefs":["RHEA:13637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane monooxygenase activity","termid":"GO:0015049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methane monooxygenase NADH activity","secondary_identifiers":["EC:1.14.13.25"],"termid":"GO:0106317"}


id: PBO:0045064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG3 antisense RNA 1","termid":"PBO:0045064"}


id: PBO:0066011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY RNA binding protein like","termid":"PBO:0066011"}


id: PATO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000514 intolerant value (obsolete PATO:0000514)","termid":"PATO:0000514"}


id: PBO:0059706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 14","termid":"PBO:0059706"}


id: GO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyclase activity","termid":"GO:0031279"}


id: PBO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 3","termid":"PBO:0044438"}


id: GO:0001025
data:
  {"annotated_genes":["SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase III transcription factor, a protein required to initiate or regulate transcription by RNA polymerase III.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase III general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase III transcription factor binding","type":"broad"}],"termid":"GO:0001025","terms_by_termid":{"GO:0001156":null}}


id: GO:0061800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber formed from fibronectin molecules. The fibrils are 5 to 25nm in diameter and can form branched meshworks.","definition_xrefs":["PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibronectin fibril","termid":"GO:0061800"}


id: SO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Morpholino oligos are synthesized from four different Morpholino subunits, each of which contains one of the four genetic bases (A, C, G, T) linked to a 6-membered morpholine ring. Eighteen to 25 subunits of these four subunit types are joined in a specific order by non-ionic phosphorodiamidate intersubunit linkages to give a Morpholino.","direct_ancestors":[{"relation_name":"has_quality","term_name":"morpholino_backbone","termid":"SO:0001183"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morpholino_oligo","synonyms":[{"name":"morphant","type":"broad"},{"name":"morpholino","type":"exact"},{"name":"morpholino oligo","type":"exact"}],"termid":"SO:0000034"}


id: PBO:0086792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcription induced by the unfolded protein response; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086792"}


id: GO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential depolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential depolarization","type":"narrow"}],"termid":"GO:0086041"}


id: GO:0009311
data:
  {"annotated_genes":["SJAG_02949","SJAG_01862","SJAG_04363","SJAG_01427","SJAG_01531","SJAG_01209","SJAG_02131","SJAG_01646","SJAG_03824","SJAG_00129","SJAG_00182","SJAG_04859","SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95902],"is_not":false,"summary":null,"term":"GO:0009311"},{"annotations":[97712,97711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[96471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[92243,92242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009313"},{"annotations":[112219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[105017,93281,73409,89478,87989,92659,97179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[107616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[87991,87990,107617,92660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005991"},{"annotations":[89479,92661,93282,73408,87992,97180,107618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070413"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051690"],"synonyms":[{"name":"multicellular organismal oligosaccharide metabolic process","type":"narrow"},{"name":"oligosaccharide metabolism","type":"exact"}],"termid":"GO:0009311","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005991":null,"GO:0005992":null,"GO:0005993":null,"GO:0005995":null,"GO:0009311":null,"GO:0009313":null,"GO:0070413":null}}


id: PBO:0083933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN1 has a paralog, CLN2, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083933"}


id: PBO:0003895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Iki1 (predicted)","termid":"PBO:0003895"}


id: RO:HOM0000048
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes that experienced duplications more recent than the species split that created them.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_many_to_many_homology_relationship_with","termid":"RO:HOM0000036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_orthology_relationship_with","synonyms":[{"name":"co-orthology","type":"related"},{"name":"many to many orthologous to","type":"exact"},{"name":"many-to-many orthology","type":"exact"},{"name":"many:many orthology","type":"exact"},{"name":"trans-homology","type":"related"},{"name":"trans-orthology","type":"exact"}],"termid":"RO:HOM0000048"}


id: PBO:0086714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant is deficient in cell wall mannosylphosphate and has long chronological lifespan; genetic interactions suggest a role in ER-associated protein degradation (ERAD); SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086714"}


id: GO:1905416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amoeboid sperm motility","synonyms":[{"name":"regulation of ameboid sperm motility","type":"exact"},{"name":"regulation of ameboid sperm movement","type":"exact"},{"name":"regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905416"}


id: PBO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 2","termid":"PBO:0070467"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: GO:0036122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the bone morphogenetic protein (BMP) family.","definition_xrefs":["PMID:9660951","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"BMP binding","synonyms":[{"name":"bone morphogenetic protein binding","type":"exact"}],"termid":"GO:0036122"}


id: PR:000005216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the human CDC5L gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 5-like protein","synonyms":[{"name":"CDC5L","type":"exact"},{"name":"KIAA0432","type":"related"},{"name":"PCDC5RP","type":"related"},{"name":"cdc5-like protein","type":"exact"},{"name":"pombe cdc5-related protein","type":"exact"}],"termid":"PR:000005216"}


id: PBO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-1","termid":"PBO:0052933"}


id: GO:0080032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a methyl jasmonate + H2O = a jasmonic acid + methanol.","definition_xrefs":["PMID:18467465","PMID:15233793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"methyl jasmonate esterase activity","secondary_identifiers":["MetaCyc:RXN-10767"],"synonyms":[{"name":"MEJA esterase activity","type":"exact"},{"name":"jasmonic acid methyl ester esterase activity","type":"exact"},{"name":"methyl JA esterase activity","type":"exact"}],"termid":"GO:0080032"}


id: GO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to copper ion","termid":"GO:0046688"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion","synonyms":[{"name":"cellular response to copper","type":"exact"}],"termid":"GO:0071280"}


id: PR:Q9C1X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1X1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic tryptophan protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.04c","synonyms":[{"name":"Spom972h-pwp2","type":"exact"}],"termid":"PR:Q9C1X1"}


id: PBO:0056506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose binding lectin 1, pseudogene","termid":"PBO:0056506"}


id: PATO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000473 relative_quality value (obsolete PATO:0000473)","termid":"PATO:0000473"}


id: GO:0160076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical inflammasome complex assembly.","definition_xrefs":["PMID:26375259","PMID:22002608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"negatively_regulates","term_name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of non-canonical inflammasome complex assembly","termid":"GO:0160076"}


id: GO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"fibroblast growth factor production","termid":"GO:0090269"}


id: GO:0009044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-xylans so as to remove successive D-xylose residues from the non-reducing termini.","definition_xrefs":["EC:3.2.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"xylan 1,4-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.37-RXN"],"synonyms":[{"name":"1,4-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"beta-D-xylopyranosidase activity","type":"related"},{"name":"beta-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-D-xylosidase activity","type":"related"},{"name":"exo-1,4-beta-xylosidase activity","type":"related"},{"name":"exo-1,4-xylosidase activity","type":"related"},{"name":"xylobiase activity","type":"related"}],"termid":"GO:0009044"}


id: PR:Q9UTA7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.11 gene.","definition_xrefs":["UniProtKB:Q9UTA7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C25B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.11","synonyms":[{"name":"Spom972h-SPAC25B8.11","type":"exact"}],"termid":"PR:Q9UTA7"}


id: PBO:0091425
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric(1)","termid":"PBO:0091425"}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: GO:0007076
data:
  {"annotated_genes":["SJAG_03832","SJAG_03942","SJAG_00207","SJAG_03048","SJAG_03567","SJAG_03161","SJAG_01837","SJAG_05193","SJAG_03682","SJAG_01873","SJAG_00646","SJAG_00871","SJAG_05032","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87931,93893,99297,100737,102297,108156,109494,112005,112621,113771],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[84199,107791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[112771,98501],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007076","terms_by_termid":{"GO:0007076":null,"GO:1903380":null,"GO:1990893":null}}


id: PBO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 2","termid":"PBO:0044608"}


id: SO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H2B protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK12_acetylation_site","synonyms":[{"name":"H2BK12 acetylation site","type":"exact"},{"name":"H2BK12ac","type":"exact"}],"termid":"SO:0001937"}


id: GO:1903259
data:
  {"annotated_genes":["SJAG_01252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101990],"is_not":false,"summary":null,"term":"GO:1903259"}]},"cv_name":"biological_process","definition":"The disaggregation of an exon-exon junction complex into its constituent components.","definition_xrefs":["GOC:TermGenie","PMID:24967911","GO_REF:0000079","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exon-exon junction complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EJC disassembly","type":"exact"}],"termid":"GO:1903259","terms_by_termid":{"GO:1903259":null}}


id: GO:0016042
data:
  {"annotated_genes":["SJAG_00413","SJAG_01036","SJAG_02093","SJAG_03204","SJAG_00519","SJAG_02543","SJAG_02089","SJAG_00622","SJAG_04311","SJAG_04292","SJAG_03604","SJAG_04973","SJAG_02763","SJAG_02100","SJAG_04110","SJAG_01219","SJAG_00199","SJAG_00706","SJAG_01519","SJAG_02091","SJAG_00321","SJAG_02161","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[93815,109954,88707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044242"},{"annotations":[107941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[87601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[97631,86288,93904,88021,88030,96935,99099,110850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[90060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[113062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[90061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[92069,97976,89518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009395"},{"annotations":[96126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[86001,104932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[90175,113647,88036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_00413":null,"SJAG_00519":null,"SJAG_00622":null,"SJAG_00706":null,"SJAG_01036":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02543":null,"SJAG_02763":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04311":null,"SJAG_04954":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044240","Wikipedia:Lipid_catabolism","GO:0006724"],"synonyms":[{"name":"lipid breakdown","type":"exact"},{"name":"lipid catabolism","type":"exact"},{"name":"lipid degradation","type":"exact"},{"name":"lipolysis","type":"exact"},{"name":"multicellular organism lipid catabolic process","type":"narrow"},{"name":"multicellular organismal lipid catabolic process","type":"narrow"}],"termid":"GO:0016042","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0006660":null,"GO:0009062":null,"GO:0009395":null,"GO:0016095":null,"GO:0019433":null,"GO:0034638":null,"GO:0044242":null,"GO:0046461":null,"GO:0046464":null,"GO:0046475":null,"GO:0046521":null}}


id: PBO:0049887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 6","termid":"PBO:0049887"}


id: PBO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer hallmarks in lung lncRNA 1","termid":"PBO:0043009"}


id: PBO:0065095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 2","termid":"PBO:0065095"}


id: GO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sirohydrochlorin + Co2+ = cobalt-sirohydrochlorin + 2 H+.","definition_xrefs":["RHEA:15893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin cobaltochelatase activity","secondary_identifiers":["EC:4.99.1.3","MetaCyc:4.99.1.3-RXN"],"synonyms":[{"name":"anaerobic cobalt chelatase activity","type":"exact"},{"name":"cobalt-sirohydrochlorin cobalt-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"cobaltochelatase","type":"exact"},{"name":"sirohydrochlorin cobalt-lyase activity","type":"related"}],"termid":"GO:0016852"}


id: PBO:0085081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear decapping endonuclease; targets mRNAs with unmethylated 7-methylguanosine cap structures and 5'-triphosphates; binds to and stabilizes the exoribonuclease Rat1p; required for pre-rRNA processing; involved in an early step of decapping nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; relocalizes to the cytosol in response to hypoxia; homologous to human DOM3Z","termid":"PBO:0085081"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: PBO:0060370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotilin","termid":"PBO:0060370"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: PBO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA m(1)G methyltransferase Trm10 (predicted)","termid":"PBO:0001545"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: GO:2001090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotriuloseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maltotriulose transport","termid":"GO:2001090"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: PBO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 4","termid":"PBO:0047496"}


id: GO:1901783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cumate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"p-cumate metabolic process","termid":"GO:1901781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate biosynthetic process","synonyms":[{"name":"p-cumate anabolism","type":"exact"},{"name":"p-cumate biosynthesis","type":"exact"},{"name":"p-cumate formation","type":"exact"},{"name":"p-cumate synthesis","type":"exact"}],"termid":"GO:1901783"}


id: PBO:0053753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 993","termid":"PBO:0053753"}


id: PBO:0056598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase 2","termid":"PBO:0056598"}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_04899","SJAG_07008","SJAG_01838","SJAG_06135","SJAG_04450","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106260],"is_not":false,"summary":null,"term":"GO:0043461"},{"annotations":[96804,92985,105843,112749,85221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null,"GO:0043461":null}}


id: GO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolepyruvate = CO2 + indole acetaldehyde.","definition_xrefs":["EC:4.1.1.74","MetaCyc:4.1.1.74-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"indolepyruvate decarboxylase activity","secondary_identifiers":["RHEA:18017"],"synonyms":[{"name":"3-(indol-3-yl)pyruvate carboxy-lyase [(2-indol-3-yl)acetaldehyde-forming]","type":"related"},{"name":"3-(indol-3-yl)pyruvate carboxy-lyase activity","type":"related"},{"name":"indol-3-yl-pyruvate carboxy-lyase activity","type":"related"},{"name":"indole-3-pyruvate decarboxylase activity","type":"related"}],"termid":"GO:0047434"}


id: PBO:0056593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing glycosylphosphatidylinositol anchor 2","termid":"PBO:0056593"}


id: GO:1901341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium channel activity","synonyms":[{"name":"activation of store-operated calcium channel activity","type":"narrow"},{"name":"up regulation of store-operated calcium channel activity","type":"exact"},{"name":"up-regulation of store-operated calcium channel activity","type":"exact"},{"name":"upregulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:1901341"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"published","termid":"PBO:0000001"}


id: FYPO:0005761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein glycosylation is normal (i.e. indistinguishable from wild type). Protein O-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid via a hydroxyl or phenol group, forming an O-glycan.","definition_xrefs":["GO:0006493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein O-linked glycosylation during vegetative growth","synonyms":[{"name":"normal protein O-linked glycosylation during mitotic cell cycle","type":"related"},{"name":"normal protein amino acid O-linked glycosylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide O-linked glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005761"}


id: PBO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036226"}


id: GO:0034353
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87838],"is_not":false,"summary":null,"term":"GO:0034353"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a 5' terminal diphosphate from the 5'-triphosphate end of an mRNA, leaving a 5'-monophosphate end.","definition_xrefs":["PMID:17612492","PMID:18202662","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"mRNA 5'-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA pyrophosphohydrolase activity","type":"broad"}],"termid":"GO:0034353","terms_by_termid":{"GO:0034353":null}}


id: GO:0038030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a Wnt protein binding to a frizzled family receptor on the surface of a target cell, where the signal is passed on via the MAPKKK cascade.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:signaling","PMID:17720811"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via MAPK cascade (obsolete GO:0038030)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via MAPK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPK signaling","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via MAPK cascade","type":"exact"}],"termid":"GO:0038030"}


id: GO:0106144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction fraxetin+ NAD(P)H + 02= sideretin + NAD(P)(+) + H20.","definition_xrefs":["PMID:29581584","RHEA:57844","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fraxetin 5-hydroxylase activity","secondary_identifiers":["EC:1.14.14.164"],"termid":"GO:0106144"}


id: PBO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 16","termid":"PBO:0070786"}


id: PBO:0045318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain alpha","termid":"PBO:0045318"}


id: PBO:0057188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 346","termid":"PBO:0057188"}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: GO:2000346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"negatively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte proliferation","termid":"GO:2000346"}


id: GO:1903038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:rl","PMID:21106532","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"negatively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"down regulation of leukocyte adhesion","type":"exact"},{"name":"down regulation of leukocyte cell adhesion","type":"exact"},{"name":"down regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"down-regulation of leukocyte adhesion","type":"exact"},{"name":"down-regulation of leukocyte cell adhesion","type":"exact"},{"name":"down-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"downregulation of leukocyte adhesion","type":"exact"},{"name":"downregulation of leukocyte cell adhesion","type":"exact"},{"name":"downregulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"inhibition of leukocyte adhesion","type":"narrow"},{"name":"inhibition of leukocyte cell adhesion","type":"narrow"},{"name":"inhibition of leukocyte cell-cell adhesion","type":"narrow"},{"name":"negative regulation of leukocyte adhesion","type":"exact"},{"name":"negative regulation of leukocyte cell adhesion","type":"exact"}],"termid":"GO:1903038"}


id: PBO:0068426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 1","termid":"PBO:0068426"}


id: GO:0004816
data:
  {"annotated_genes":["SJAG_04856","SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98389,101174],"is_not":false,"summary":null,"term":"GO:0004816"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + ATP + tRNA(Asn) = AMP + Asn-tRNA(Asn) + diphosphate + 2 H+.","definition_xrefs":["RHEA:11180","EC:6.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"asparagine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARAGINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379996","Reactome:R-HSA-380227","KEGG_REACTION:R03648"],"synonyms":[{"name":"L-asparagine:tRNAAsn ligase (AMP-forming)","type":"related"},{"name":"asparagine translase activity","type":"related"},{"name":"asparaginyl transfer RNA synthetase activity","type":"related"},{"name":"asparaginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"asparaginyl-tRNA synthetase activity","type":"exact"},{"name":"asparaginyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"asparagyl-transfer RNA synthetase activity","type":"related"}],"termid":"GO:0004816","terms_by_termid":{"GO:0004816":null}}


id: PBO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 19","termid":"PBO:0052727"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


id: PATO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000687 relative rate value (obsolete PATO:0000687)","termid":"PATO:0000687"}


id: PBO:0068570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 21, pseudogene","termid":"PBO:0068570"}


id: PBO:0067613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 785, pseudogene","termid":"PBO:0067613"}


id: PR:O59790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aurora kinase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ark1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.13c","secondary_identifiers":["UniProtKB:O59790"],"synonyms":[{"name":"SPCC320.13c","type":"related"},{"name":"Spom972h-AURKB","type":"exact"},{"name":"aurora-related kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sex1","type":"related"}],"termid":"PR:O59790"}


id: PBO:0111799
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0111799"}


id: PBO:0088876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase Cab2","termid":"PBO:0088876"}


id: PBO:0068687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 68, pseudogene","termid":"PBO:0068687"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: PBO:0050356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 59","termid":"PBO:0050356"}


id: PBO:0111441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein","termid":"PBO:0111441"}


id: GO:0000196
data:
  {"annotated_genes":["SJAG_01181","SJAG_01114","SJAG_02392","SJAG_04522","SJAG_05000","SJAG_03753","SJAG_04825","SJAG_04551","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88405,98262,107088],"is_not":false,"summary":null,"term":"GO:0000196"},{"annotations":[103726,103156,114360,99927,91987,95563],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"A MAPK cascade containing at least the SLT2 (S.cerevisiae)/Pmk1 (S.pombe) MAP kinase. It starts with the activation of an upstream MAP4K, and continues with the consecutive activation of a MAP3K and a MAP2K. The upstream MAP4K is activated following the detection of stretching of the plasma membrane or alterations of its connections to the cell wall by membrane sensors.","definition_xrefs":["PMID:9561267","PMID:22174182","PMID:15944456","PMID:26945038","PMID:17604854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"},{"relation_name":"part_of","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_01181":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03753":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0023052","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CWI pathway","type":"related"},{"name":"MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"Mpk1 cascade","type":"narrow"},{"name":"PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"Slt2 cascade","type":"narrow"},{"name":"cell integrity MAPK pathway","type":"exact"},{"name":"cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:0000196","terms_by_termid":{"GO:0000196":null,"GO:1903138":null}}


id: PBO:0041406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 132","termid":"PBO:0041406"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:TermGenie","PMID:10594013","PMID:19666497","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: GO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis.","definition_xrefs":["PMID:11607105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosystem stoichiometry adjustment","termid":"GO:0080005"}


id: PBO:0042028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85C","termid":"PBO:0042028"}


id: PBO:0089144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak3","termid":"PBO:0089144"}


id: PBO:0044127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 13, pseudogene","termid":"PBO:0044127"}


id: MOD:01777
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal glycine residue to S-(glycyl)-L-cysteine by forming a thioester bond with a free L-cysteine.","definition_xrefs":["PubMed:18359941","PubMed:18771296","PubMed:3306404","ChEBI:22050","PubMed:18799456","PubMed:18842002","RESID:AA0206","PubMed:17726030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"MOD_RES CysO-cysteine adduct","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:01777"}


id: PBO:0079581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 2","termid":"PBO:0079581"}


id: PBO:0067065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 91, pseudogene","termid":"PBO:0067065"}


id: GO:0048165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antral spaces fuse to form a single antral space. The oocyte is suspended in the cumulus oophorous and the first polar body in the perivitelline space.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fused antrum stage","synonyms":[{"name":"mammalian oogenesis stage 8","type":"exact"}],"termid":"GO:0048165"}


id: GO:1901373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid hydroperoxide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lipid hydroperoxide transport","termid":"GO:1901373"}


id: GO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infolding of the epithelial sheet into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invagination involved in gastrulation with mouth forming second","termid":"GO:0055109"}


id: SO:1000047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion that does not include the centromere.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paracentric","termid":"SO:0001519"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric_inversion","synonyms":[{"name":"paracentric inversion","type":"exact"}],"termid":"SO:1000047"}


id: GO:1902927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inulin.","definition_xrefs":["PMID:23104410","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan catabolic process","termid":"GO:0010147"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"inulin catabolic process","synonyms":[{"name":"inulin breakdown","type":"exact"},{"name":"inulin catabolism","type":"exact"},{"name":"inulin degradation","type":"exact"}],"termid":"GO:1902927"}


id: PBO:0070128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 42 pseudogene","termid":"PBO:0070128"}


id: GO:0007579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence factor accumulation (obsolete GO:0007579)","synonyms":[{"name":"senescence factor accumulation","type":"exact"}],"termid":"GO:0007579"}


id: PBO:0029392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029392"}


id: GO:0033610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate metabolic process","termid":"GO:0033609"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxalate biosynthetic process","synonyms":[{"name":"ethanedioate biosynthetic process","type":"exact"},{"name":"ethanedioic acid biosynthetic process","type":"exact"},{"name":"oxalate anabolism","type":"exact"},{"name":"oxalate biosynthesis","type":"exact"},{"name":"oxalate formation","type":"exact"},{"name":"oxalate synthesis","type":"exact"},{"name":"oxalic acid biosynthetic process","type":"exact"}],"termid":"GO:0033610"}


id: GO:0102365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxusin + NADPH + O2 + H+ = 2-alpha-hydroxytaxusin + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:15178487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taxusin 2-alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13486"],"termid":"GO:0102365"}


id: PBO:0061645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 3","termid":"PBO:0061645"}


id: GO:0051047
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of secretion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of secretion","type":"narrow"},{"name":"stimulation of secretion","type":"narrow"},{"name":"up regulation of secretion","type":"exact"},{"name":"up-regulation of secretion","type":"exact"},{"name":"upregulation of secretion","type":"exact"}],"termid":"GO:0051047","terms_by_termid":{"GO:0045921":null}}


id: GO:0141101
data:
  {"annotated_genes":["SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114027],"is_not":false,"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: S-adenosyl-L-methionine + uridine44 in tRNASer = 2'-O-methyluridine44 in tRNASer + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:18025252","RHEA:43100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12368","EC:2.1.1.211"],"synonyms":[{"name":"tRNA(Ser) (uracil(44)-2'-O-)-methyltransferase activity","type":"exact"}],"termid":"GO:0141101","terms_by_termid":{"GO:0141101":null}}


id: GO:0022885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a bacteriocin from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}


id: PBO:0053695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 895","termid":"PBO:0053695"}


id: GO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"retinoid metabolic process","synonyms":[{"name":"retinoid metabolism","type":"exact"}],"termid":"GO:0001523"}


id: GO:0035437
data:
  {"annotated_genes":["SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in the endoplasmic reticulum and prevented from moving elsewhere. These include sequestration within the endoplasmic reticulum, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the endoplasmic reticulum.","definition_xrefs":["GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization in endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"maintenance of protein localization in ER","type":"exact"},{"name":"maintenance of protein location in ER","type":"exact"},{"name":"maintenance of protein location in endoplasmic reticulum","type":"exact"},{"name":"protein-ER retention","type":"exact"},{"name":"protein-endoplasmic reticulum retention","type":"exact"},{"name":"retention of protein in ER","type":"exact"},{"name":"retention of protein in endoplasmic reticulum","type":"exact"}],"termid":"GO:0035437","terms_by_termid":{"GO:0006621":null}}


id: GO:0102697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + O-beta-D-glucosyl-trans-zeatin = H+ + trans-zeatin-O-glucoside-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-zeatin-O-glucoside UDP glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4736"],"termid":"GO:0102697"}


id: PBO:0041409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 163","termid":"PBO:0041409"}


id: MOD:01993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the beta-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}


id: GO:1900470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8056324","PMID:8614637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"activation of phosphatidylserine anabolism","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylserine formation","type":"exact"},{"name":"activation of phosphatidylserine synthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine formation","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylserine formation","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylserine formation","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylserine formation","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900470"}


id: SO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VDJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_C_cluster","synonyms":[{"name":"V VDJ C cluster","type":"exact"},{"name":"V-(VDJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000520"}


id: PATO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering a bearer by virtue of the bearer's ability to generate pus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative","synonyms":[{"name":"purulent","type":"related"}],"termid":"PATO:0002120"}


id: SO:1000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a purine nucleotide, A or G , into a pyrimidine nucleotide C or T.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_to_pyrimidine_transversion","synonyms":[{"name":"purine to pyrimidine transversion","type":"exact"}],"termid":"SO:1000023"}


id: GO:0097074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 7.","definition_xrefs":["GOC:cna","Reactome:R-HSA-450344","PMID:18068231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 7 complex","synonyms":[{"name":"IRF7:IRF7 complex","type":"exact"}],"termid":"GO:0097074"}


id: GO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-leucine binding","synonyms":[{"name":"Leu binding","type":"broad"},{"name":"leucine binding","type":"broad"}],"termid":"GO:0070728"}


id: GO:0031175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection development","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite development","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite outgrowth","type":"narrow"}],"termid":"GO:0031175"}


id: PBO:0090408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Rsv1","termid":"PBO:0090408"}


id: PBO:0087306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype","termid":"PBO:0087306"}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:cjm","GOC:dph","GOC:mr","GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: PBO:0088490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3","termid":"PBO:0088490"}


id: PBO:0012308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012308"}


id: PBO:0027382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exit_from_mitosis","termid":"PBO:0027382"}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: GO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system. Penicillins are produced naturally during the growth of various microfungi of the genera Penicillium and Aspergillus.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"penicillin metabolic process","synonyms":[{"name":"penicillin metabolism","type":"exact"}],"termid":"GO:0042316"}


id: PBO:0076565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3F","termid":"PBO:0076565"}


id: GO:0052785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown into simpler components of cellulose. Catabolism is initiated by endohydrolytic attacks on the cellulose chain, and the resulting pieces are further degraded by cellulase enzymes to produce smaller and smaller fragments.","definition_xrefs":["PMID:18035374","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose catabolism by endo-processive cellulases","synonyms":[{"name":"endo-processive cellulase activity","type":"related"}],"termid":"GO:0052785"}


id: PBO:0089309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase GH125 family Mug157","termid":"PBO:0089309"}


id: GO:0042661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"}


id: PBO:0063466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor like 2, pseudogene","termid":"PBO:0063466"}


id: PBO:0064030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 64","termid":"PBO:0064030"}


id: FYPO:0006280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of crossover formation as part of mitotic recombination is increased in centromeric regions.","definition_xrefs":["PomBase:mah","PMID:28977643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased mitotic recombination with crossover formation at centromere","termid":"FYPO:0006280"}


id: GO:0050737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxycinnamoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"hydroxycinnamoyltransferase activity","termid":"GO:0050734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}


id: GO:1900094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry (obsolete GO:1900094)","synonyms":[{"name":"global transcription regulation from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"global transcription regulation from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of transcription from Pol II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from Pol II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right asymmetry","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right symmetry","type":"related"}],"termid":"GO:1900094"}


id: PBO:0054103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1465","termid":"PBO:0054103"}


id: SO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone modification.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_modification","synonyms":[{"name":"silenced by histone modification","type":"exact"}],"termid":"SO:0001221"}


id: PBO:0041974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 15","termid":"PBO:0041974"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0054355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1748","termid":"PBO:0054355"}


id: PBO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17","termid":"PBO:0003750"}


id: PBO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker","termid":"PBO:0060228"}


id: PBO:0078077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAM2 antisense RNA 1 (head to head)","termid":"PBO:0078077"}


id: PATO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's motion characteristic.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flow rate","termid":"PATO:0001574"}


id: PBO:0086841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with similarity to asparagine synthetases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YML096W is not an essential gene and partially overlaps the verified gene RAD10","termid":"PBO:0086841"}


id: PBO:0077064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1","termid":"PBO:0077064"}


id: GO:0016825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid phosphorus-nitrogen bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","secondary_identifiers":["EC:3.9.1.-"],"termid":"GO:0016825"}


id: PBO:0039206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10","termid":"PBO:0039206"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: GO:0102462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = quercetin 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"quercetin 3-sophoroside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14011"],"termid":"GO:0102462"}


id: FYPO:0008012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell dies at a level of mechanical stress that wild-type cells can normally withstand.","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cell sensitive to mechanical stress","termid":"FYPO:0008012"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: PBO:0065670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type S","termid":"PBO:0065670"}


id: PBO:0083643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongase; involved in fatty acid and sphingolipid biosynthesis; synthesizes very long chain 20-26-carbon fatty acids from C18-CoA primers; involved in regulation of sphingolipid biosynthesis; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083643"}


id: PBO:0070185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 103 pseudogene","termid":"PBO:0070185"}


id: PBO:0087650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterodimeric FACT complex (Spt16p-Pob3p); FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases; protein abundance increases in response to DNA replication stress","termid":"PBO:0087650"}


id: PBO:0084804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084804"}


id: GO:0015343
data:
  {"annotated_genes":["SJAG_02735","SJAG_03667","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106898,106899,113672],"is_not":false,"summary":null,"term":"GO:0015343"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: siderophore-iron(out) + H+(out) = siderophore-iron(in) + H+(in).","definition_xrefs":["PMID:20376388","PMID:31748738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"siderophore-iron transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015237","GO:0042927","Reactome:R-HSA-1222597","GO:0015236"],"synonyms":[{"name":"iron-siderophore transporter activity","type":"exact"},{"name":"siderochrome transporter activity","type":"narrow"},{"name":"siderochrome-iron transporter activity","type":"narrow"},{"name":"siderophore transmembrane transporter activity","type":"related"},{"name":"siderophore transporter activity","type":"related"},{"name":"siderophore-iron transporter activity","type":"related"}],"termid":"GO:0015343","terms_by_termid":{"GO:0015343":null}}


id: GO:0035272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system.","definition_xrefs":["Wikipedia:Exocrine_gland","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exocrine system development","termid":"GO:0035272"}


id: GO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. Any member of the Rho subfamily of the RAS superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton.","definition_xrefs":["EC:3.6.1.47","ISBN:0198547684","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Rho small monomeric GTPase activity (obsolete GO:0003931)","synonyms":[{"name":"Rho small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003931"}


id: GO:0072350
data:
  {"annotated_genes":["SJAG_01922","SJAG_04577","SJAG_00502","SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[95584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006101"},{"annotations":[95893,92488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00502":null,"SJAG_01922":null,"SJAG_04362":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tricarboxylic acid metabolism","type":"exact"}],"termid":"GO:0072350","terms_by_termid":{"GO:0000053":null,"GO:0006101":null,"GO:0006102":null}}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[115138,115139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["PomBase:mah","GO:0000920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444","SJAG_02252","SJAG_03143"],"single_locus_genotype_uniquenames":["ace2delta","agn1delta","sep1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0075120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 169","termid":"PBO:0075120"}


id: PR:O74830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1183.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C1183.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.02","synonyms":[{"name":"Spom972h-SPCC1183.02","type":"exact"}],"termid":"PR:O74830"}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: GO:0098692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses noradrenaline as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"noradrenergic synapse","termid":"GO:0098692"}


id: PBO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 16","termid":"PBO:0048067"}


id: GO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 3 promoter by SNAP-type and TFIIIC-type factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity (obsolete GO:0001029)","synonyms":[{"name":"RNA polymerase III type 3 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001029"}


id: GO:0140397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reactions: versiconal hemiacetal acetate + H2O = versiconal + acetate, as well as versiconol acetate + H2O = versiconol + acetate.","definition_xrefs":["EC:3.1.1.94","PMID:15932995","PMID:8368837","PMID:15006741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"versiconal hemiacetal acetate esterase activity","secondary_identifiers":["MetaCyc:RXN-9488","MetaCyc:RXN-9493","RHEA:35715"],"termid":"GO:0140397"}


id: PBO:0055452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2884","termid":"PBO:0055452"}


id: PBO:0087629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Dcp1p-Dcp2p decapping enzyme complex; decapping complex removes the 5' cap structure from mRNAs prior to their degradation; enhances the activity of catalytic subunit Dcp2p; regulated by DEAD box protein Dhh1p; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0087629"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: GO:0030688
data:
  {"annotated_genes":["SJAG_00897","SJAG_00838","SJAG_01618","SJAG_04611","SJAG_02250","SJAG_03539","SJAG_03458","SJAG_03654","SJAG_00344","SJAG_01338","SJAG_05018","SJAG_04339","SJAG_05187","SJAG_00562","SJAG_05186"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84022,84512,85210,90459,93211,95931,97684,99244,100689,103073,107165,109004,109098],"is_not":false,"summary":null,"term":"GO:0030688"},{"annotations":[106208,99770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00562":null,"SJAG_00838":null,"SJAG_00897":null,"SJAG_01338":null,"SJAG_01618":null,"SJAG_02250":null,"SJAG_03458":null,"SJAG_03539":null,"SJAG_03654":null,"SJAG_04339":null,"SJAG_04611":null,"SJAG_05018":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"preribosome, small subunit precursor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"43S preribosome","type":"narrow"}],"termid":"GO:0030688","terms_by_termid":{"GO:0030688":null,"GO:0030692":null}}


id: PR:O13970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.10c","secondary_identifiers":["UniProtKB:O13970"],"synonyms":[{"name":"Spom972h-rpsB","type":"exact"}],"termid":"PR:O13970"}


id: GO:1990276
data:
  {"annotated_genes":["SJAG_00559"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104152],"is_not":false,"summary":null,"term":"GO:1990276"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the 5'-gamma-phosphate in an RNA molecule.","definition_xrefs":["PMID:22740346","GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00559":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"RNA 5'-gamma-phosphate methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA 5'-methyltransferase activity","type":"related"}],"termid":"GO:1990276","terms_by_termid":{"GO:1990276":null}}


id: PBO:0062327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 65","termid":"PBO:0062327"}


id: PBO:0063651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 8","termid":"PBO:0063651"}


id: GO:0042462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell development","termid":"GO:0042462"}


id: PBO:0076557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 1","termid":"PBO:0076557"}


id: PBO:0108565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic (ERCC1) subunit Swi10","termid":"PBO:0108565"}


id: GO:0033107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic vesicle that is enclosed by a double membrane and is implicated in the cytoplasm to vacuole targeting pathway. These vesicles are found in the yeast S. cerevisiae, and contain vacuolar hydrolases, aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p).","definition_xrefs":["GOC:rb","PMID:15138258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Cvt vesicle","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle","type":"exact"}],"termid":"GO:0033107"}


id: PBO:0065227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR7 antisense RNA 1","termid":"PBO:0065227"}


id: PBO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA","termid":"PBO:0003248"}


id: GO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem organization.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem structural organization","synonyms":[{"name":"regulation of meristem organisation","type":"exact"},{"name":"regulation of meristem organization","type":"broad"}],"termid":"GO:0009934"}


id: FYPO:0002888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested after the septum has formed, but before cells have separated, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8978671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"mitotic cell cycle arrest before cell separation","synonyms":[{"name":"cell cycle arrest before cell separation during mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation after cytokinesis","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest before mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0002888"}


id: GO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, carried out at the level of an individual cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol biosynthetic process (obsolete GO:0044108)","termid":"GO:0044108"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: PBO:0041411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C7","termid":"PBO:0041411"}


id: PR:Q10103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.02c","synonyms":[{"name":"Spom972h-chp1","type":"exact"}],"termid":"PR:Q10103"}


id: PBO:0064852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3","termid":"PBO:0064852"}


id: PBO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 16","termid":"PBO:0062146"}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: PBO:0074219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 pseudogene 1","termid":"PBO:0074219"}


id: RO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has developmental contribution from","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_contribute_to","termid":"RO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_contributes_to","termid":"RO:0002255"}


id: PBO:0085786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase","termid":"PBO:0085786"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: PBO:0039219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1 pseudogene 1","termid":"PBO:0039219"}


id: GO:0015126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed movement of bile acid and bile salts out of a hepatocyte and into the bile canaliculus by means of an agent such as a transporter or pore. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"canalicular bile acid transmembrane transporter activity","termid":"GO:0015126"}


id: GO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:dph","PMID:12086627","PMID:9858577"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to osmotic stress (obsolete GO:0061392)","termid":"GO:0061392"}


id: GO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules.","definition_xrefs":["PMID:15928678","PMID:15928680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"MHC class Ib protein complex assembly","termid":"GO:0002398"}


id: GO:0004044
data:
  {"annotated_genes":["SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93944],"is_not":false,"summary":null,"term":"GO:0004044"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O.","definition_xrefs":["EC:2.4.2.14","RHEA:14905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"amidophosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PRPPAMIDOTRANS-RXN","Reactome:R-HSA-73815","KEGG_REACTION:R01072"],"synonyms":[{"name":"5'-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)","type":"related"},{"name":"5-phosphororibosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"alpha-5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine 5-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosyldiphosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine ribosylpyrophosphate 5-phosphate amidotransferase activity","type":"related"},{"name":"phosphoribose pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyldiphosphate 5-amidotransferase activity","type":"related"},{"name":"phosphoribosylpyrophosphate glutamyl amidotransferase activity","type":"related"}],"termid":"GO:0004044","terms_by_termid":{"GO:0004044":null}}


id: PBO:0062026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily N member 1 pseudogene","termid":"PBO:0062026"}


id: GO:0035188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The emergence of an immature organism from a protective structure.","definition_xrefs":["GOC:isa_complete","GOC:dgh","ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organism emergence from protective structure","termid":"GO:0071684"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching","termid":"GO:0035188"}


id: PBO:0025546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par1","termid":"PBO:0025546"}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: GO:0042463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of photoreceptors, sensory cells that react to the presence of light, found in the ocellus.","definition_xrefs":["ISBN:0192800981","PMID:11542766","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell development","secondary_identifiers":["GO:0001749"],"synonyms":[{"name":"non-eye photoreceptor development","type":"broad"}],"termid":"GO:0042463"}


id: PBO:0033822
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemeRYthrin-like domain","termid":"PBO:0033822"}


id: MOD:02054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-proline residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-proline residue","synonyms":[{"name":"XlnkPro","type":"exact"}],"termid":"MOD:02054"}


id: SO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_intron","synonyms":[{"name":"interior intron","type":"exact"}],"termid":"SO:0000191"}


id: GO:0061626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pharyngeal arch artery is generated and organized. The pharyngeal arch arteries are a series of six paired embryological vascular structures, the development of which give rise to several major arteries, such as the stapedial artery, the middle meningeal artery, the internal carotid artery and the pulmonary artery.","definition_xrefs":["GOC:dph","PMID:20122914","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"pharyngeal system development","termid":"GO:0060037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharyngeal arch artery morphogenesis","synonyms":[{"name":"aortic arch artery morphogenesis","type":"broad"}],"termid":"GO:0061626"}


id: PBO:0053983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1299","termid":"PBO:0053983"}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["RHEA:24120","EC:1.14.13.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN","KEGG_REACTION:R04256"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: PATO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's disposition to spontaneous transfer of thermal energy from a region of higher temperature to a region of lower temperature.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Heat_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat conductivity","synonyms":[{"name":"thermal conduction","type":"exact"}],"termid":"PATO:0001756"}


id: GO:1990391
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527","SJAG_02237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96049,109997,112417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex involved in DNA repair processes including direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.","definition_xrefs":["PMID:22749910","PMID:24192350","PMID:20551348","GOC:bhm","PMID:17217467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA repair complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage repair complex","type":"exact"},{"name":"WHY1 complex","type":"narrow"}],"termid":"GO:1990391","terms_by_termid":{"GO:0032807":null}}


id: PBO:0083211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF SEC59/YML013C","termid":"PBO:0083211"}


id: PBO:0077802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated high mobility group box","termid":"PBO:0077802"}


id: PR:Q9HDV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L27, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP19A11.05c","synonyms":[{"name":"Spom972h-mrp7","type":"exact"}],"termid":"PR:Q9HDV5"}


id: PBO:0082218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 7 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0082218"}


id: PBO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit Cdc6","termid":"PBO:0004185"}


id: PBO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear paraspeckle assembly transcript 1","termid":"PBO:0060812"}


id: PBO:0075484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 2, pseudogene","termid":"PBO:0075484"}


id: FYPO:0000796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased glycerol dehydrogenase activity","termid":"FYPO:0000796"}


id: GO:1905762
data:
  {"annotated_genes":["SJAG_04682","SJAG_02622","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85869,101016,114168],"is_not":false,"summary":null,"term":"GO:1905762"}]},"cv_name":"molecular_function","definition":"Binding to a CCR4-NOT complex.","definition_xrefs":["PMID:26942678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_02622":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CCR4-NOT complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905762","terms_by_termid":{"GO:1905762":null}}


id: PBO:0040212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat, SAM and basic leucine zipper domain containing 1","termid":"PBO:0040212"}


id: GO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of dipeptide transport. Dipeptide transport is the directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"regulates","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dipeptide transport","termid":"GO:0090089"}


id: GO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: rhamnose(out) + H+(out) = rhamnose(in) + H+(in).","definition_xrefs":["TC:2.A.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"rhamnose transmembrane transporter activity","termid":"GO:0015153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"rhamnose:proton symporter activity","synonyms":[{"name":"rhamnose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015561"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: PATO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetic quality inhering in a bearer by virtue of the bearer's inability to exert magnitism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnetism","termid":"PATO:0001682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-magnetic","termid":"PATO:0001686"}


id: GO:0035081
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: GO:0120185
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MBF transcription complex.","definition_xrefs":["PMID:9303312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"MBF transcription complex assembly","synonyms":[{"name":"DSC1 transcription factor complex assembly","type":"exact"},{"name":"MBF complex assembly","type":"exact"},{"name":"Mlu1-box binding factor assembly","type":"exact"}],"termid":"GO:0120185"}


id: SO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a ribozyme.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA_gene","termid":"SO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribozyme_gene","synonyms":[{"name":"ribozyme gene","type":"exact"}],"termid":"SO:0002181"}


id: PBO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ilvB acetolactate synthase like","termid":"PBO:0051628"}


id: GO:1900038
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id: FYPO:0003569
data:
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id: PR:Q10056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shk2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase shk2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.09c","synonyms":[{"name":"Spom972h-shk2","type":"exact"}],"termid":"PR:Q10056"}


id: PBO:0018102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0018102"}


id: GO:0052514
data:
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id: GO:0044248
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catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:24699070":null},"synonyms":[{"name":"cellular breakdown","type":"exact"},{"name":"cellular catabolism","type":"exact"},{"name":"cellular degradation","type":"exact"}],"termid":"GO:0044248","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0000949":null,"GO:0001561":null,"GO:0006530":null,"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0006543":null,"GO:0006546":null,"GO:0006562":null,"GO:0006565":null,"GO:0006567":null,"GO:0006572":null,"GO:0006574":null,"GO:0006635":null,"GO:0006660":null,"GO:0006751":null,"GO:0006798":null,"GO:0006914":null,"GO:0009062":null,"GO:0009074":null,"GO:0009395":null,"GO:0009436":null,"GO:0010121":null,"GO:0010133":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016095":null,"GO:0016236":null,"GO:0016237":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0019243":null,"GO:0019266":null,"GO:0019433":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0030242":null,"GO:0030995":null,"GO:0033512":null,"GO:0034517":null,"GO:0034638":null,"GO:0034727":null,"GO:0035973":null,"GO:0036088":null,"GO:0042744":null,"GO:0042820":null,"GO:0042853":null,"GO:0043171":null,"GO:0044242":null,"GO:0044804":null,"GO:0046177":null,"GO:0046294":null,"GO:0046461":null,"GO:0046464":null,"GO:0046475":null,"GO:0046521":null,"GO:0052707":null,"GO:0061709":null,"GO:0061723":null,"GO:0061727":null,"GO:0061739":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903457":null,"GO:1903599":null,"GO:2000786":null}}


id: PBO:0046397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 3","termid":"PBO:0046397"}


id: FYPO:0003130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1 phase entry","termid":"FYPO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature mitotic G1 phase entry during cellular response to ionizing radiation","synonyms":[{"name":"accelerated entry into G1 during cellular response to ionizing radiation","type":"related"},{"name":"advanced mitotic G1 phase entry during cellular response to ionizing radiation","type":"exact"},{"name":"mitotic cell cycle advance in G1 during cellular response to ionizing radiation","type":"related"},{"name":"premature G1 phase entry during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis during cellular response to ionizing radiation","type":"exact"},{"name":"premature mitotic G1 phase entry during cellular response to IR","type":"exact"},{"name":"premature mitotic G1 phase entry during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"premature mitotic G1 progression during cellular response to ionizing radiation","type":"related"}],"termid":"FYPO:0003130"}


id: MOD:01525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01525"}


id: FYPO:0007287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the galactosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["GO:0042125","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein glycosylation during vegetative growth","termid":"FYPO:0001911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein galactosylation during vegetative growth","synonyms":[{"name":"decreased protein galactosylation during mitotic cell cycle","type":"related"},{"name":"reduced protein galactosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007287"}


id: PBO:0111811
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0111811"}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: GO:0015495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + H+(out) = gamma-aminobutyric acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.4","TC:2.A.3.4.2","TC:2.A.18.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyric acid:proton symporter activity","secondary_identifiers":["GO:0005331","GO:0015329","MetaCyc:TRANS-RXN-57","Reactome:R-HSA-428625","RHEA:28915"],"synonyms":[{"name":"4-aminobutanoate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutanoate:proton symporter activity","type":"exact"},{"name":"4-aminobutyrate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutyrate:proton symporter activity","type":"exact"},{"name":"GABA:hydrogen symporter activity","type":"exact"},{"name":"GABA:proton symporter activity","type":"exact"},{"name":"gamma-aminobutyric acid permease activity","type":"exact"},{"name":"gamma-aminobutyric acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015495"}


id: PBO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000827"}


id: GO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["UM-BBD_reactionID:r1065","PMID:11995829","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity","secondary_identifiers":["EC:1.3.99.-"],"synonyms":[{"name":"TNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052758"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-stranded telomeric DNA binding","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: PBO:0057912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3615","termid":"PBO:0057912"}


id: PBO:0062392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 13 pseudogene","termid":"PBO:0062392"}


id: PBO:0081950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 3","termid":"PBO:0081950"}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: GO:0033127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone phosphorylation (obsolete GO:0033127)","termid":"GO:0033127"}


id: GO:0060309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of elastin. Elastin is a glycoprotein which is randomly coiled and crosslinked to form elastic fibers that are found in connective tissue.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"elastin metabolic process","termid":"GO:0051541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"elastin catabolic process","synonyms":[{"name":"elastin breakdown","type":"exact"},{"name":"elastin catabolism","type":"exact"},{"name":"elastin degradation","type":"exact"}],"termid":"GO:0060309"}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: PBO:0075763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRRM2 antisense RNA 1","termid":"PBO:0075763"}


id: PR:Q10304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.11c gene.","definition_xrefs":["UniProtKB:Q10304","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.11c","synonyms":[{"name":"Spom972h-SPAC22H10.11c","type":"exact"}],"termid":"PR:Q10304"}


id: PR:O74399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BOP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17605:SF0","PRO:DNx","OMA:SCHPO03387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein erb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.13c","secondary_identifiers":["UniProtKB:O74399"],"synonyms":[{"name":"Spom972h-BOP1","type":"exact"},{"name":"eukaryotic ribosome biogenesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74399"}


id: PBO:0059610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 22","termid":"PBO:0059610"}


id: GO:1903082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11602640","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine-mediated signaling pathway","termid":"GO:0070101"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"positively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"activation of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"activation of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"activation of CCR7 signaling pathway","type":"related"},{"name":"positive regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"positive regulation of CCR7 signaling pathway","type":"related"},{"name":"up regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up regulation of CCR7 signaling pathway","type":"related"},{"name":"up-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up-regulation of CCR7 signaling pathway","type":"related"},{"name":"upregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"upregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"upregulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903082"}


id: FYPO:0000567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of septum assembly","synonyms":[{"name":"decreased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"decreased duration of division septum assembly","type":"exact"},{"name":"decreased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of septation","type":"broad"},{"name":"decreased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"decreased duration of septum assembly during vegetative growth","type":"exact"},{"name":"decreased septation","type":"related"},{"name":"decreased septum formation","type":"related"},{"name":"reduced duration of septum assembly","type":"exact"},{"name":"septum formation: decreased","type":"broad"}],"termid":"FYPO:0000567"}


id: PR:P78929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A destrin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02001","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.06c","secondary_identifiers":["UniProtKB:P78929"],"synonyms":[{"name":"Spom972h-DSTN","type":"exact"},{"name":"actin-depolymerizing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78929"}


id: PBO:0078687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-3","termid":"PBO:0078687"}


id: PBO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1 pseudogene 1","termid":"PBO:0048438"}


id: GO:0017076
data:
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id: GO:0044718
data:
  {"annotated_genes":["SJAG_02834","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61324,61568,106894,106895],"is_not":false,"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"siderophore transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"siderophore membrane transport","type":"exact"}],"termid":"GO:0044718","terms_by_termid":{"GO:0044718":null}}


id: PBO:0041508
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 93","termid":"PBO:0041508"}


id: PBO:0076949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFA intronic transcript 1","termid":"PBO:0076949"}


id: PR:Q9UTA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.18 gene.","definition_xrefs":["UniProtKB:Q9UTA2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"redox protein fmp46, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.18","synonyms":[{"name":"Spom972h-SPAC25B8.18","type":"exact"}],"termid":"PR:Q9UTA2"}


id: PBO:0068204
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: PBO:0003900
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein (predicted)","termid":"PBO:0003900"}


id: GO:0052783
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:15256553","PMID:16000808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"reuteran metabolic process","termid":"GO:0052783"}


id: PBO:0059297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L46","termid":"PBO:0059297"}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: GO:2000028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoperiodism, flowering.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoperiodism, flowering","synonyms":[{"name":"regulation of photoperiodic control of flowering time","type":"exact"},{"name":"regulation of photoperiodic control of inflorescence development","type":"exact"},{"name":"regulation of response to day length, flowering","type":"exact"},{"name":"regulation of response to night length, flowering","type":"exact"},{"name":"regulation of response to photoperiod, flowering","type":"exact"}],"termid":"GO:2000028"}


id: PBO:0056610
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2 pseudogene 1","termid":"PBO:0056610"}


id: PBO:0072638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retbindin","termid":"PBO:0072638"}


id: PBO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 1","termid":"PBO:0048052"}


id: PBO:0110161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw3","termid":"PBO:0110161"}


id: PBO:0049764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 1","termid":"PBO:0049764"}


id: FYPO:0005947
data:
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id: GO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting of an injured axon.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting of injured axon","termid":"GO:0048686"}


id: PBO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 gamma pseudogene 1","termid":"PBO:0050293"}


id: GO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower formation","secondary_identifiers":["GO:0048410"],"termid":"GO:0048460"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:mtg_cardio","GOC:cjm","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: PBO:0059158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase domain containing 2","termid":"PBO:0059158"}


id: FYPO:0000186
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mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280","SJAG_01143","SJAG_03596","SJAG_00118","SJAG_02392"],"name":"abnormal cell division","references_by_uniquename":{"PMID:22300943":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02252","SJAG_04522","SJAG_00118","SJAG_03596","SJAG_03449","SJAG_03444","SJAG_02592","SJAG_03143","SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","agn1delta","ace2delta","pom1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","mid1delta","rga4delta","mid2delta","sty1delta","sep1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell division during mitotic cell cycle","type":"related"},{"name":"abnormal cell division during vegetative growth","type":"exact"}],"termid":"FYPO:0000186","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0028384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0028384"}


id: PBO:0057979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3714","termid":"PBO:0057979"}


id: PBO:0066363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 like","termid":"PBO:0066363"}


id: PBO:0050854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 1","termid":"PBO:0050854"}


id: PBO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbinds SPAC11H11.04 with force 120 pN at probe speed 1.74 um/s","termid":"PBO:0011516"}


id: GO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete apelin-like receptor (obsolete GO:0001597)","synonyms":[{"name":"APJ-like receptor","type":"exact"},{"name":"apelin-like receptor","type":"exact"}],"termid":"GO:0001597"}


id: GO:0008365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of the chitin-based cuticle of adults following the apolysis of the pupal cuticle. The adult insect cuticle contains cuticullin, a protein epicuticle and a lamellate procuticle. An example of this process is adult chitin-based cuticle development in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle development","synonyms":[{"name":"adult chitin-based cuticle anabolism","type":"exact"},{"name":"adult chitin-based cuticle biosynthetic process","type":"exact"},{"name":"adult chitin-based cuticle formation","type":"exact"},{"name":"adult chitin-based cuticle synthesis","type":"exact"},{"name":"adult cuticle anabolism","type":"broad"},{"name":"adult cuticle biosynthetic process","type":"broad"},{"name":"adult cuticle formation","type":"broad"},{"name":"adult cuticle synthesis","type":"broad"}],"termid":"GO:0008365"}


id: PBO:0077116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM23B-AGAP6 readthrough (NMD candidate)","termid":"PBO:0077116"}


id: PBO:0081290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 73, pseudogene","termid":"PBO:0081290"}


id: GO:2000707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"positively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dense core granule biogenesis","termid":"GO:2000707"}


id: PR:O94377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit f, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.11","synonyms":[{"name":"Spom972h-atp17","type":"exact"}],"termid":"PR:O94377"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: GO:0018034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-alanine amide by hydrolysis and oxidation of an interior Ala-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0081"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-alanine amidation (obsolete GO:0018034)","termid":"GO:0018034"}


id: MOD:00187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an L-tyrosine residue with L-thyroxine.","definition_xrefs":["RESID:AA0178","Unimod:398","ChEBI:18332","PubMed:6704086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-thyroxine","synonyms":[{"name":"(S)-2-amino-3-[4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodophenyl]propanoic acid","type":"exact"},{"name":"3',3'',5',5''-tetraiodo-L-thyronine","type":"exact"},{"name":"3,3',5,5'-tetraiodo-L-thyronine","type":"exact"},{"name":"3,5,3',5'-tetraiodo-L-thyronine","type":"exact"},{"name":"4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodo-L-phenylalanine","type":"exact"},{"name":"I4Thy","type":"exact"},{"name":"L-thyroxine","type":"exact"},{"name":"MOD_RES Thyroxine","type":"exact"},{"name":"O-(4-hydroxy-3,5-diiodophenyl)-3,5-diiodo-L-tyrosine","type":"exact"},{"name":"T4","type":"exact"},{"name":"Thyroxine","type":"related"},{"name":"tetraiodo","type":"related"}],"termid":"MOD:00187"}


id: PBO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 73","termid":"PBO:0042016"}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"}],"termid":"FYPO:0001309"}


id: PR:000050493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:30853434","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/UnPhos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, PR:000026291","type":"narrow"},{"name":"mid1/UnPhos","type":"exact"},{"name":"mid1/UnPhos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050493"}


id: PBO:0063833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase","termid":"PBO:0063833"}


id: GO:1990322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIII) chains; type XXIII collagen triple helices span the plasma membrane.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"collagen type XXIII trimer","termid":"GO:1990322"}


id: GO:0033773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an isoflavone + O2 + reduced [NADPH-hemoprotein reductase] = a 2'-hydroxyisoflavone + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:18849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isoflavone 2'-hydroxylase activity","secondary_identifiers":["EC:1.14.14.90","MetaCyc:ISOFLAVONE-2-HYDROXYLASE-RXN"],"synonyms":[{"name":"CYP Ge-3","type":"related"},{"name":"CYP81E1","type":"related"},{"name":"isoflavone 2'-monooxygenase activity","type":"broad"}],"termid":"GO:0033773"}


id: PBO:0074933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 100","termid":"PBO:0074933"}


id: PR:O60121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stomatin-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.07c","secondary_identifiers":["UniProtKB:O60121"],"synonyms":[{"name":"Spom972h-STOML2","type":"exact"}],"termid":"PR:O60121"}


id: GO:0033277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle in which mitosis is begun and progresses normally through the end of anaphase, but not completed, resulting in a cell with increased ploidy.","definition_xrefs":["GOC:mah","PMID:9573008"],"gene_count":0,"genotype_count":0,"name":"obsolete abortive mitotic cell cycle (obsolete GO:0033277)","synonyms":[{"name":"abortive mitosis","type":"related"}],"termid":"GO:0033277"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:bc","PMID:25490267","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: PBO:0076765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 3","termid":"PBO:0076765"}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: PBO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family Crr1","termid":"PBO:0090639"}


id: PBO:0045425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 5","termid":"PBO:0045425"}


id: GO:0000015
data:
  {"annotated_genes":["SJAG_00461","SJAG_02107","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101554,101555,101556],"is_not":false,"summary":null,"term":"GO:0000015"}]},"cv_name":"cellular_component","definition":"A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_02107":null,"SJAG_02369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"phosphopyruvate hydratase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"enolase complex","type":"exact"}],"termid":"GO:0000015","terms_by_termid":{"GO:0000015":null}}


id: PBO:0004212
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SIC1","termid":"PBO:0004212"}


id: PBO:0061030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 1","termid":"PBO:0061030"}


id: GO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"butanoyltransferase activity","termid":"GO:0034326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"O-butanoyltransferase activity","termid":"GO:0034323"}


id: GO:0033232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-methionine(out/in) = ADP + phosphate + D-methionine(in/out).","definition_xrefs":["RHEA:29767","PMID:12169620","PMID:18621668","GOC:mlg","PMID:12819857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"},{"relation_name":"is_a","term_name":"methionine transmembrane transporter activity","termid":"GO:0043865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-methionine transporter activity","secondary_identifiers":["GO:0032522","EC:7.4.2.11","GO:0032521","GO:0048474","GO:1901243","MetaCyc:TRANS-RXN0-202"],"synonyms":[{"name":"ATP-dependent D-methionine transporter activity","type":"related"},{"name":"ATP-dependent methionine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled D-methionine transporter activity","type":"related"},{"name":"ATPase-coupled methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine exporter","type":"related"},{"name":"D-methionine importer","type":"related"},{"name":"D-methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine transporter activity","type":"related"},{"name":"D-methionine-exporting ATPase activity","type":"related"},{"name":"D-methionine-importing ATPase activity","type":"related"},{"name":"D-methionine-transporting ATPase activity","type":"related"},{"name":"methionine transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:0033232"}


id: PBO:0077519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 234","termid":"PBO:0077519"}


id: PR:Q9P6M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.06c","synonyms":[{"name":"Spom972h-slx4","type":"exact"},{"name":"synthetic lethal of unknown function protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M0"}


id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: PBO:0049188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL3 antisense RNA 1","termid":"PBO:0049188"}


id: PBO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-reversed_RTS1_barrier_polarity","termid":"PBO:0033783"}


id: FYPO:0004204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snRNA or precursor level","termid":"FYPO:0005997"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased mature snRNA level","synonyms":[{"name":"decreased mature small nuclear RNA level","type":"exact"},{"name":"decreased mature snRNA accumulation","type":"related"},{"name":"decreased mature snRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature snRNA level during vegetative growth","type":"exact"},{"name":"decreased mature snRNA transcript level","type":"broad"},{"name":"decreased snRNA level","type":"broad"},{"name":"reduced mature snRNA level","type":"exact"}],"termid":"FYPO:0004204"}


id: PBO:0067581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 738, pseudogene","termid":"PBO:0067581"}


id: GO:0008822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonobetaine/carnitine-CoA ligase activity (obsolete GO:0008822)","synonyms":[{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"exact"}],"termid":"GO:0008822"}


id: PBO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 2","termid":"PBO:0045510"}


id: GO:0051705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism has a behavioral effect on another organism of the same or different species.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism behavior (obsolete GO:0051705)","synonyms":[{"name":"behavioral interaction between organisms","type":"exact"},{"name":"behavioral interaction with other organism","type":"exact"},{"name":"behavioral signaling","type":"narrow"},{"name":"behavioral signalling","type":"narrow"},{"name":"behavioural interaction between organisms","type":"exact"},{"name":"behavioural interaction with other organism","type":"exact"}],"termid":"GO:0051705"}


id: MOD:00668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a decanoyloxy group.","definition_xrefs":["Unimod:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decanoylated residue","termid":"MOD:00667"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-decanoylated residue","synonyms":[{"name":"Decanoyl","type":"related"},{"name":"ODecRes","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00668"}


id: GO:0099625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of a ventricular cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}


id: PBO:0054334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1727","termid":"PBO:0054334"}


id: PBO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase (predicted)","termid":"PBO:0002401"}


id: GO:0102867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + MoO2-molybdopterin cofactor(2-) + L-cysteine = thio-molybdenum cofactor + L-alanine + H2O.","definition_xrefs":["EC:2.8.1.9","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"molybdenum cofactor sulfurtransferase activity","secondary_identifiers":["RHEA:42636","MetaCyc:RXN-8351"],"termid":"GO:0102867"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: FYPO:0003600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased rRNA precursor level","synonyms":[{"name":"increased rRNA precursor accumulation","type":"related"},{"name":"increased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003600"}


id: PBO:0027970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_reactive_oxygen_species_level_during_nitrogen_starvation","termid":"PBO:0027970"}


id: GO:0043892
data:
  {"annotated_genes":["SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101146],"is_not":false,"summary":null,"term":"GO:0043892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactaldehyde + NADP+ = methylglyoxal + NADPH + H+.","definition_xrefs":["EC:1.1.1.283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21748","MetaCyc:1.1.1.283-RXN"],"synonyms":[{"name":"Gre2","type":"related"},{"name":"lactaldehyde dehydrogenase (NADP+)","type":"exact"},{"name":"lactaldehyde:NADP+ oxidoreductase activity","type":"related"},{"name":"methylglyoxal reductase (NADPH-dependent) activity","type":"exact"}],"termid":"GO:0043892","terms_by_termid":{"GO:0043892":null}}


id: PATO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a boat.","definition_xrefs":["wordnetweb:wordnetweb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaphoid","termid":"PATO:0002426"}


id: PBO:0041896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 2","termid":"PBO:0041896"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: PBO:0090766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic spindle pole body KASH domain protein Kms2","termid":"PBO:0090766"}


id: PBO:0086878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcriptional repressor with Zn(2)-Cys(6) finger; negatively regulates transcription in response to oleate levels, based on mutant phenotype and localization to oleate-responsive promoters; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; forms nuclear foci upon DNA replication stress","termid":"PBO:0086878"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: PBO:0056195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A6","termid":"PBO:0056195"}


id: GO:0010355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisic acid + farnesyl diphosphate = 2-methyl-6-farnesylplastoquinol.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homogentisate farnesyltransferase activity","termid":"GO:0010355"}


id: PBO:0078196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-6","termid":"PBO:0078196"}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: PBO:0051014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 1","termid":"PBO:0051014"}


id: PBO:0057000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92b","termid":"PBO:0057000"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: PATO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000363 away (obsolete PATO:0000363)","termid":"PATO:0000363"}


id: PBO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 28","termid":"PBO:0060040"}


id: PBO:0011487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011487"}


id: PBO:0029355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromere","termid":"PBO:0029355"}


id: PBO:0111823
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0111823"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["RESID:AA0132","PubMed:3838747","Unimod:388#C","PubMed:8876649","ChEBI:15618","PubMed:14588022","PubMed:3208761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: PBO:0062969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 12","termid":"PBO:0062969"}


id: PBO:0064632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 alpha","termid":"PBO:0064632"}


id: GO:0005626
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete insoluble fraction (obsolete GO:0005626)","synonyms":[{"name":"insoluble fraction","type":"exact"},{"name":"particle-bound","type":"related"}],"termid":"GO:0005626"}


id: PBO:0058253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4540","termid":"PBO:0058253"}


id: GO:0032807
data:
  {"annotated_genes":["SJAG_02237","SJAG_02527","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96049,109997,112417],"is_not":false,"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved protein complex that contains DNA ligase IV and is involved in DNA repair by non-homologous end joining; in addition to the ligase, the complex also contains XRCC4 or a homolog, e.g. Saccharomyces Lif1p.","definition_xrefs":["PMID:16314503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA ligase IV complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA ligase IV-XRCC4 complex","type":"exact"}],"termid":"GO:0032807","terms_by_termid":{"GO:0032807":null}}


id: PBO:0091651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase","termid":"PBO:0091651"}


id: GO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a series of septin structures that are localized in the bud neck of a budding fungal cell during the cell cycle.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin structure","termid":"GO:0000399"}


id: GO:0106330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-9-O-acetylneuraminate = acetate + H+ + N-acetylneuraminate.","definition_xrefs":["PMID:22291594","RHEA:22600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialate O-acetylesterase activity","termid":"GO:0001681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"sialate 9-O-acetylesterase activity","termid":"GO:0106330"}


id: FYPO:0000089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methyl methanesulfonate. Cells stop growing (and may die) at a concentration of methyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to methyl methanesulfonate","synonyms":[{"name":"hypersensitive to methyl methanesulfonate","type":"exact"},{"name":"sensitive to MMS","type":"exact"},{"name":"sensitive to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0000089"}


id: PBO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the YKL050W protein is a target of the SCFCdc4 ubiquitin ligase complex and YKL050W transcription is regulated by Azf1p; YKL050C has a paralog, EIS1, that arose from the whole genome duplication","termid":"PBO:0086023"}


id: PBO:0094073
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_variant","termid":"PBO:0094073"}


id: PBO:0058197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4490","termid":"PBO:0058197"}


id: GO:0034230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide.","definition_xrefs":["GOC:mah","GOC:rl","PMID:8262946","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"enkephalin processing","synonyms":[{"name":"enkephalin formation","type":"exact"},{"name":"peptide enkephalin formation","type":"exact"},{"name":"peptide enkephalin processing","type":"exact"}],"termid":"GO:0034230"}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: PBO:0053368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 280","termid":"PBO:0053368"}


id: PBO:0027088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027088"}


id: PBO:0082054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs","termid":"PBO:0082054"}


id: GO:0018947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"anaerobic organosilicon metabolism","type":"exact"},{"name":"anaerobic organosilicone metabolic process","type":"exact"},{"name":"anaerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018947"}


id: GO:0008200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an ion channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel inhibitor activity","termid":"GO:0016248"},{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"ion channel inhibitor activity","termid":"GO:0008200"}


id: GO:1904098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein O-linked glycosylation.","definition_xrefs":["GO_REF:0000058","PMID:24509081","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"regulates","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"regulation of protein O-linked glycosylation","synonyms":[{"name":"regulation of protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:1904098"}


id: PBO:0031147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactomannan_level","termid":"PBO:0031147"}


id: PBO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.11","termid":"PBO:0005849"}


id: PBO:0090683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein","termid":"PBO:0090683"}


id: SO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coiled coil is a structural motif in proteins, in which alpha-helices are coiled together like the strands of a rope.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_motif","termid":"SO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"coiled_coil","secondary_identifiers":["BS:00041","http://en.wikipedia.org/wiki/Coiled_coil"],"synonyms":[{"name":"coiled","type":"related"},{"name":"coiled coil","type":"exact"}],"termid":"SO:0001080"}


id: GO:1901772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lincomycin.","definition_xrefs":["GOC:yaf","PMID:8577249","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"lincomycin metabolic process","synonyms":[{"name":"lincomycin metabolism","type":"exact"}],"termid":"GO:1901772"}


id: MOD:00410
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-isopropylcarboxamidomethyl)-L-cysteine.","definition_xrefs":["OMSSA:84","PubMed:11465505","PubMed:8465942","Unimod:17#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(N-isopropylcarboxamidomethyl)-L-cysteine","synonyms":[{"name":"N-isopropylcarboxamidomethyl","type":"related"},{"name":"NIPCAM","type":"related"},{"name":"nipcam","type":"exact"}],"termid":"MOD:00410"}


id: PBO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family 1","termid":"PBO:0003014"}


